Volume 10; Issue 6

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Molecular BioSystems
Volume 10; Issue 6

Molecular BioSystems

Volume 10; Issue 6

1

Engineering a synthetic cell panel to identify signalling components reprogrammed by the cell growth regulator anterior gradient-2

Gray, Terry A., Alsamman, Khaldoon, Murray, Euan, Sims, Andrew H., R. Hupp, Ted

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 3.32 MB

english, 2014

2

Relationship between the lipidome, inflammatory markers and insulin resistance

Wallace, Martina, Morris, Ciara, O'Grada, Colm M., Ryan, Miriam, Dillon, Eugene T., Coleman, Eilish, Gibney, Eileen R., Gibney, Michael J., Roche, Helen M., Brennan, Lorraine

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 2.24 MB

english, 2014

3

Computational analyses reveal a prognostic impact of TULP3 as a transcriptional master regulator in pancreatic ductal adenocarcinoma

Sartor, I. T. S., Zeidán-Chuliá, F., Albanus, R. D., Dalmolin, R. J. S., Moreira, J. C. F.

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 2.68 MB

english, 2014

4

In silico identification of novel kinase inhibitors targeting wild-type and T315I mutant ABL1 from FDA-approved drugs

Xu, Huai-long, Wang, Zi-jie, Liang, Xiao-meng, Li, Xin, Shi, Zheng, Zhou, Nan, Bao, Jin-ku

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 4.07 MB

english, 2014

5

A cyclic dinucleotide containing 2-aminopurine is a general fluorescent sensor for c-di-GMP and 3′,3′-cGAMP

Roembke, Benjamin T., Zhou, Jie, Zheng, Yue, Sayre, David, Lizardo, Allan, Bernard, Laurentee, Sintim, Herman O.

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 2.09 MB

english, 2014

6

Are proteins a redundant ontology? Epistemological limitations in the analysis of multistate species

Corfe, Bernard M., Evans, Caroline A.

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.78 MB

english, 2014

7

Rapid in vitro protein synthesis pipeline: a promising tool for cost-effective protein array design

Bhide, Mangesh, Natarajan, Satheesh, Hresko, Stanislav, Aguilar, Carmen, Bencurova, Elena

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 3.73 MB

english, 2014

8

The prediction of candidate genes for cervix related cancer through gene ontology and graph theoretical approach

Hindumathi, V., Kranthi, T., Rao, S. B., Manimaran, P.

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.33 MB

english, 2014

9

Selenium effects on the metabolism of a Se-metabolizing Lactobacillus reuteri: analysis of envelope-enriched and extracellular proteomes

Mangiapane, E., Lamberti, C., Pessione, A., Galano, E., Amoresano, A., Pessione, E.

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.71 MB

english, 2014

10

Prioritization of candidate disease genes by enlarging the seed set and fusing information of the network topology and gene expression

Zhang, Shao-Wu, Shao, Dong-Dong, Zhang, Song-Yao, Wang, Yi-Bin

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.49 MB

english, 2014

11

10.1039/C3MB70306A

Journal:

Molecular BioSystems

Language:

english

File:

PDF, 1.47 MB

english

12

10.1039/C4MB00014E

Journal:

Molecular BioSystems

Language:

english

File:

PDF, 2.82 MB

english

13

MIROR: a method for cell-type specific microRNA occupancy rate prediction

Xie, Peng, Liu, Yu, Li, Yanda, Zhang, Michael Q., Wang, Xiaowo

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.58 MB

english, 2014

14

Differential simulated annealing: a robust and efficient global optimization algorithm for parameter estimation of biological networks

Dai, Ziwei, Lai, Luhua

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.85 MB

english, 2014

15

Proteomics and phosphoproteomics provide insights into the mechanism of action of a novel pyrazolo[3,4-d]pyrimidine Src inhibitor in human osteosarcoma

Bernardini, Giulia, Laschi, Marcella, Serchi, Tommaso, Spreafico, Adriano, Botta, Maurizio, Schenone, Silvia, Arena, Simona, Geminiani, Michela, Scaloni, Andrea, Collodel, Giulia, Orlandini, Maurizio,

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.97 MB

english, 2014

16

Analysis of the mitochondrial proteome of cybrid cells harbouring a truncative mitochondrial DNA mutation in respiratory complex I

Musicco, Clara, Cormio, Antonella, Calvaruso, Maria Antonietta, Iommarini, Luisa, Gasparre, Giuseppe, Porcelli, Anna Maria, Timperio, Anna Maria, Zolla, Lello, Gadaleta, Maria Nicola

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.32 MB

english, 2014

17

Regulation of cell survival by the HIP-55 signaling network

Yang, Chengzhi, Li, Zenggang, Shi, Zhi, He, Kangmin, Tian, Aiju, Wu, Jimin, Zhang, Youyi, Li, Zijian

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.94 MB

english, 2014

18

Contents list

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 5.34 MB

english, 2014

19

Protective effects of the neuropeptides PACAP, substance P and the somatostatin analogue octreotide in retinal ischemia: a metabolomic analysis

D'Alessandro, Angelo, Cervia, Davide, Catalani, Elisabetta, Gevi, Federica, Zolla, Lello, Casini, Giovanni

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 2.16 MB

english, 2014

20

Combining a wavelet change point and the Bayes factor for analysing chromosomal interaction data

Shavit, Yoli, Lio', Pietro

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.82 MB

english, 2014

21

Mitochondrial proteomics investigation of a cellular model of impaired dopamine homeostasis, an early step in Parkinson's disease pathogenesis

Alberio, Tiziana, Bondi, Heather, Colombo, Flavia, Alloggio, Isabella, Pieroni, Luisa, Urbani, Andrea, Fasano, Mauro

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 2.64 MB

english, 2014

22

Assessment of early triage for acute radiation injury in rat model based on urinary amino acid target analysis

Zhang, Yuanyuan, Zhou, Xian, Li, Chao, Wu, Jianfang, Kuo, John E., Wang, Chang

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.35 MB

english, 2014

23

Urinary protease inhibitor Serpin B3 is higher in women and is further increased in female patients affected by aldosterone producing adenoma

Olivieri, Oliviero, Cecconi, Daniela, Castagna, Annalisa, Chiecchi, Laura, Guarini, Patrizia, Gunasekaran, Muthukumar, Morandini, Francesca, Brazzarola, Paolo, Zolla, Lello, D'Alessandro, Angelo, Vegl

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.44 MB

english, 2014

24

Front cover

Journal:

Molecular BioSystems

Year:

2014

File:

PDF, 347 KB

2014

25

Search for peripheral biomarkers in patients affected by acutely psychotic bipolar disorder: a proteomic approach

Giusti, Laura, Mantua, Valentina, Da Valle, Ylenia, Ciregia, Federica, Ventroni, Tiziana, Orsolini, Ginevra, Donadio, Elena, Giannaccini, Gino, Mauri, Mauro, Cassano, Giovanni Battista, Lucacchini, An

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 2.75 MB

english, 2014

26

One medicine – one health – one biology and many proteins: proteomics on the verge of the One Health approach

Roncada, Paola, Modesti, Alessandra, Timperio, Anna Maria, Bini, Luca, Castagnola, Massimo, Fasano, Mauro, Urbani, Andrea

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 903 KB

english, 2014

27

How does conformational flexibility influence key structural features involved in activation of anaplastic lymphoma kinase?

Karabencheva, Tatyana G., Lee, Christian C., Black, Gary W., Donev, Rossen, Christov, Christo Z.

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.81 MB

english, 2014

28

10.1039/c3mb70584f

Journal:

Molecular BioSystems

Language:

english

File:

PDF, 2.16 MB

english

29

Inside front cover

Journal:

Molecular BioSystems

Year:

2014

File:

PDF, 201 KB

2014

30

Back cover

Journal:

Molecular BioSystems

Year:

2014

File:

PDF, 833 KB

2014

31

Identification of potential pathways involved in the induction of cell cycle arrest and apoptosis by a new 4-arylidene curcumin analogue T63 in lung cancer cells: a comparative proteomic analysis

Liu, Hao, Liu, Yan-Zhen, Zhang, Fan, Wang, Hong-Sheng, Zhang, Ge, Zhou, Bin-Hua, Zuo, Ying-Lin, Cai, Shao-Hui, Bu, Xian-Zhang, Du, Jun

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 2.03 MB

english, 2014

32

Most associations between transcript features and gene expression are monotonic

Shaham, Gilad, Tuller, Tamir

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 3.58 MB

english, 2014

33

City block distance and rough-fuzzy clustering for identification of co-expressed microRNAs

Paul, Sushmita, Maji, Pradipta

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 3.47 MB

english, 2014

34

10.1039/c3mb70316a

Journal:

Molecular BioSystems

Language:

english

File:

PDF, 1.24 MB

english

35

Evolutionarily conserved and conformationally constrained short peptides might serve as DNA recognition elements in intrinsically disordered regions

Tayal, Nitish, Choudhary, Preeti, Pandit, Shashi B., Sandhu, Kuljeet Singh

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 2.82 MB

english, 2014

36

Metabolomics analysis reveals that bile acids and phospholipids contribute to variable responses to low-temperature-induced ascites syndrome

Shen, Yiru, Shi, Shourong, Tong, Haibing, Guo, Yuming, Zou, Jianmin

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 2.37 MB

english, 2014

37

Deciphering global signal features of high-throughput array data from cancers

Wu, Deng, Kang, Juanjuan, Huang, Yan, Li, Xiang, Wang, Xiansong, Huang, Dan, Wang, Yuting, Li, Bin, Hao, Dapeng, Gu, Qi, Tang, Nelson, Li, Kongning, Guo, Zheng, Li, Xia, Xu, Jianzhen, Wang, Dong

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 1.97 MB

english, 2014

38

The intrinsic disorder status of the human hepatitis C virus proteome

Fan, Xiao, Xue, Bin, Dolan, Patrick T., LaCount, Douglas J., Kurgan, Lukasz, Uversky, Vladimir N.

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 3.16 MB

english, 2014

39

10.1039/c3mb70348g

Journal:

Molecular BioSystems

Language:

english

File:

PDF, 2.56 MB

english

40

Sequence context induced antimicrobial activity: insight into lipopolysaccharide permeabilization

Ghosh, Anirban, Datta, Aritreyee, Jana, Jagannath, Kar, Rajiv Kumar, Chatterjee, Chiradip, Chatterjee, Subhrangsu, Bhunia, Anirban

Journal:

Molecular BioSystems

Year:

2014

Language:

english

File:

PDF, 3.83 MB

english, 2014

41

10.1039/c3mb70599d

Journal:

Molecular BioSystems

Language:

english

File:

PDF, 2.74 MB

english

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