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Volume 9
Main
Molecular Systems Biology
Volume 9
Molecular Systems Biology
Volume 9
1
High-throughput sequencing for biology and medicine
Soon, W. W.
,
Hariharan, M.
,
Snyder, M. P.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 1.35 MB
Your tags:
english, 2014
2
Genome-scale engineering for systems and synthetic biology
Esvelt, K. M.
,
Wang, H. H.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 1.53 MB
Your tags:
english, 2014
3
An in vivo control map for the eukaryotic mRNA translation machinery
Firczuk, H.
,
Kannambath, S.
,
Pahle, J.
,
Claydon, A.
,
Beynon, R.
,
Duncan, J.
,
Westerhoff, H.
,
Mendes, P.
,
McCarthy, J. E.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 1.28 MB
Your tags:
english, 2014
4
Cell type-specific nuclear pores: a case in point for context-dependent stoichiometry of molecular machines
Ori, A.
,
Banterle, N.
,
Iskar, M.
,
Andres-Pons, A.
,
Escher, C.
,
Khanh Bui, H.
,
Sparks, L.
,
Solis-Mezarino, V.
,
Rinner, O.
,
Bork, P.
,
Lemke, E. A.
,
Beck, M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 11.15 MB
Your tags:
english, 2014
5
A fluorescent reporter for mapping cellular protein-protein interactions in time and space
Moreno, D.
,
Neller, J.
,
Kestler, H. A.
,
Kraus, J.
,
Dunkler, A.
,
Johnsson, N.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 3.74 MB
Your tags:
english, 2014
6
Plant stem cell maintenance involves direct transcriptional repression of differentiation program
Yadav, R. K.
,
Perales, M.
,
Gruel, J.
,
Ohno, C.
,
Heisler, M.
,
Girke, T.
,
Jonsson, H.
,
Reddy, G. V.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 2.19 MB
Your tags:
english, 2014
7
SH3 interactome conserves general function over specific form
Xin, X.
,
Gfeller, D.
,
Cheng, J.
,
Tonikian, R.
,
Sun, L.
,
Guo, A.
,
Lopez, L.
,
Pavlenco, A.
,
Akintobi, A.
,
Zhang, Y.
,
Rual, J.-F.
,
Currell, B.
,
Seshagiri, S.
,
Hao, T.
,
Yang, X.
,
Shen, Y. A.
,
Salehi-Ashti
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 2.32 MB
Your tags:
english, 2014
8
Shared control of gene expression in bacteria by transcription factors and global physiology of the cell
Berthoumieux, S.
,
de Jong, H.
,
Baptist, G.
,
Pinel, C.
,
Ranquet, C.
,
Ropers, D.
,
Geiselmann, J.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 626 KB
Your tags:
english, 2014
9
Evolutionary potential, cross-stress behavior and the genetic basis of acquired stress resistance in Escherichia coli
Dragosits, M.
,
Mozhayskiy, V.
,
Quinones-Soto, S.
,
Park, J.
,
Tagkopoulos, I.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 2.16 MB
Your tags:
english, 2014
10
An Oct4-Sall4-Nanog network controls developmental progression in the pre-implantation mouse embryo
Tan, M. H.
,
Au, K. F.
,
Leong, D. E.
,
Foygel, K.
,
Wong, W. H.
,
Yao, M. W.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 2.45 MB
Your tags:
english, 2014
11
Computational meta'omics for microbial community studies
Segata, N.
,
Boernigen, D.
,
Tickle, T. L.
,
Morgan, X. C.
,
Garrett, W. S.
,
Huttenhower, C.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 1.94 MB
Your tags:
english, 2014
12
The selective control of glycolysis, gluconeogenesis and glycogenesis by temporal insulin patterns
Noguchi, R.
,
Kubota, H.
,
Yugi, K.
,
Toyoshima, Y.
,
Komori, Y.
,
Soga, T.
,
Kuroda, S.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 941 KB
Your tags:
english, 2014
13
Dissecting a complex chemical stress: chemogenomic profiling of plant hydrolysates
Skerker, J. M.
,
Leon, D.
,
Price, M. N.
,
Mar, J. S.
,
Tarjan, D. R.
,
Wetmore, K. M.
,
Deutschbauer, A. M.
,
Baumohl, J. K.
,
Bauer, S.
,
Ibanez, A. B.
,
Mitchell, V. D.
,
Wu, C. H.
,
Hu, P.
,
Hazen, T.
,
Arkin,
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 1.98 MB
Your tags:
english, 2014
14
Temporal system-level organization of the switch from glycolytic to gluconeogenic operation in yeast
Zampar, G. G.
,
Kummel, A.
,
Ewald, J.
,
Jol, S.
,
Niebel, B.
,
Picotti, P.
,
Aebersold, R.
,
Sauer, U.
,
Zamboni, N.
,
Heinemann, M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 2.67 MB
Your tags:
english, 2014
15
Apoptosis and other immune biomarkers predict influenza vaccine responsiveness
Furman, D.
,
Jojic, V.
,
Kidd, B.
,
Shen-Orr, S.
,
Price, J.
,
Jarrell, J.
,
Tse, T.
,
Huang, H.
,
Lund, P.
,
Maecker, H. T.
,
Utz, P. J.
,
Dekker, C. L.
,
Koller, D.
,
Davis, M. M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 610 KB
Your tags:
english, 2014
16
A competitive protein interaction network buffers Oct4-mediated differentiation to promote pluripotency in embryonic stem cells
Munoz Descalzo, S.
,
Rue, P.
,
Faunes, F.
,
Hayward, P.
,
Jakt, L. M.
,
Balayo, T.
,
Garcia-Ojalvo, J.
,
Martinez Arias, A.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 1.36 MB
Your tags:
english, 2014
17
Generalized bacterial genome editing using mobile group II introns and Cre-lox
Enyeart, P. J.
,
Chirieleison, S. M.
,
Dao, M. N.
,
Perutka, J.
,
Quandt, E. M.
,
Yao, J.
,
Whitt, J. T.
,
Keatinge-Clay, A. T.
,
Lambowitz, A. M.
,
Ellington, A. D.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 2.73 MB
Your tags:
english, 2014
18
Genome-scale models of metabolism and gene expression extend and refine growth phenotype prediction
O{middle dot}Brien, E. J.
,
Lerman, J. A.
,
Chang, R. L.
,
Hyduke, D. R.
,
Palsson, B. O.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 748 KB
Your tags:
english, 2014
19
Network balance via CRY signalling controls the Arabidopsis circadian clock over ambient temperatures
Gould, P. D.
,
Ugarte, N.
,
Domijan, M.
,
Costa, M.
,
Foreman, J.
,
MacGregor, D.
,
Rose, K.
,
Griffiths, J.
,
Millar, A. J.
,
Finkenstadt, B.
,
Penfield, S.
,
Rand, D. A.
,
Halliday, K. J.
,
Hall, A. J. W.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 569 KB
Your tags:
english, 2014
20
Programming biological models in Python using PySB
Lopez, C. F.
,
Muhlich, J. L.
,
Bachman, J. A.
,
Sorger, P. K.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 769 KB
Your tags:
english, 2014
21
Bacterial evolution of antibiotic hypersensitivity
Lazar, V.
,
Pal Singh, G.
,
Spohn, R.
,
Nagy, I.
,
Horvath, B.
,
Hrtyan, M.
,
Busa-Fekete, R.
,
Bogos, B.
,
Mehi, O.
,
Csorgo, B.
,
Posfai, G.
,
Fekete, G.
,
Szappanos, B.
,
Kegl, B.
,
Papp, B.
,
Pal, C.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 2.77 MB
Your tags:
english, 2014
22
Network quantification of EGFR signaling unveils potential for targeted combination therapy
Klinger, B.
,
Sieber, A.
,
Fritsche-Guenther, R.
,
Witzel, F.
,
Berry, L.
,
Schumacher, D.
,
Yan, Y.
,
Durek, P.
,
Merchant, M.
,
Schafer, R.
,
Sers, C.
,
Bluthgen, N.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 416 KB
Your tags:
english, 2014
23
Genome-wide analysis of FOXO3 mediated transcription regulation through RNA polymerase II profiling
Eijkelenboom, A.
,
Mokry, M.
,
de Wit, E.
,
Smits, L. M.
,
Polderman, P. E.
,
van Triest, M. H.
,
van Boxtel, R.
,
Schulze, A.
,
de Laat, W.
,
Cuppen, E.
,
Burgering, B. M. T.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 709 KB
Your tags:
english, 2014
24
Multilevel selection analysis of a microbial social trait
de Vargas Roditi, L.
,
Boyle, K. E.
,
Xavier, J. B.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 829 KB
Your tags:
english, 2014
25
Basic and applied uses of genome-scale metabolic network reconstructions of Escherichia coli
McCloskey, D.
,
Palsson, B. O.
,
Feist, A. M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 398 KB
Your tags:
english, 2014
26
In vitro integration of ribosomal RNA synthesis, ribosome assembly, and translation
Jewett, M. C.
,
Fritz, B. R.
,
Timmerman, L. E.
,
Church, G. M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 350 KB
Your tags:
english, 2014
27
A global S. cerevisiae small ubiquitin-related modifier (SUMO) system interactome
Srikumar, T.
,
Lewicki, M. C.
,
Raught, B.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 536 KB
Your tags:
english, 2014
28
Construction of human activity-based phosphorylation networks
Newman, R. H.
,
Hu, J.
,
Rho, H.-S.
,
Xie, Z.
,
Woodard, C.
,
Neiswinger, J.
,
Cooper, C.
,
Shirley, M.
,
Clark, H. M.
,
Hu, S.
,
Hwang, W.
,
Seop Jeong, J.
,
Wu, G.
,
Lin, J.
,
Gao, X.
,
Ni, Q.
,
Goel, R.
,
Xia, S.
,
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 674 KB
Your tags:
english, 2014
29
Cell size control is sirtuin(ly) exciting
Wright, J.
,
Schneider, B. L.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 258 KB
Your tags:
english, 2014
30
Systematic analysis of somatic mutations in phosphorylation signaling predicts novel cancer drivers
Reimand, J.
,
Bader, G. D.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 568 KB
Your tags:
english, 2014
31
Reading and writing omes
Church, G. M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 141 KB
Your tags:
english, 2014
32
Accurate measurements of dynamics and reproducibility in small genetic networks
Dubuis, J. O.
,
Samanta, R.
,
Gregor, T.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 1.17 MB
Your tags:
english, 2014
33
The functional interactome landscape of the human histone deacetylase family
Joshi, P.
,
Greco, T. M.
,
Guise, A. J.
,
Luo, Y.
,
Yu, F.
,
Nesvizhskii, A. I.
,
Cristea, I. M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 1.07 MB
Your tags:
english, 2014
34
Indirect and suboptimal control of gene expression is widespread in bacteria
Price, M. N.
,
Deutschbauer, A. M.
,
Skerker, J. M.
,
Wetmore, K. M.
,
Ruths, T.
,
Mar, J. S.
,
Kuehl, J. V.
,
Shao, W.
,
Arkin, A. P.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 379 KB
Your tags:
english, 2014
35
Promoter decoding of transcription factor dynamics
Moody, A. D.
,
Batchelor, E.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 295 KB
Your tags:
english, 2014
36
Characterization of drug-induced transcriptional modules: towards drug repositioning and functional understanding
Iskar, M.
,
Zeller, G.
,
Blattmann, P.
,
Campillos, M.
,
Kuhn, M.
,
Kaminska, K. H.
,
Runz, H.
,
Gavin, A.-C.
,
Pepperkok, R.
,
van Noort, V.
,
Bork, P.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 900 KB
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english, 2014
37
Biomedically relevant circuit-design strategies in mammalian synthetic biology
Bacchus, W.
,
Aubel, D.
,
Fussenegger, M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 808 KB
Your tags:
english, 2014
38
Properties of cell death models calibrated and compared using Bayesian approaches
Eydgahi, H.
,
Chen, W. W.
,
Muhlich, J. L.
,
Vitkup, D.
,
Tsitsiklis, J. N.
,
Sorger, P. K.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 962 KB
Your tags:
english, 2014
39
Epigenetic epistatic interactions constrain the evolution of gene expression
Park, S.
,
Lehner, B.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 282 KB
Your tags:
english, 2014
40
Nucleotide degradation and ribose salvage in yeast
Xu, Y.-F.
,
Letisse, F.
,
Absalan, F.
,
Lu, W.
,
Kuznetsova, E.
,
Brown, G.
,
Caudy, A. A.
,
Yakunin, A. F.
,
Broach, J. R.
,
Rabinowitz, J. D.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 437 KB
Your tags:
english, 2014
41
Integrative genomics of gene and metabolic regulation by estrogen receptors and , and their coregulators
Madak-Erdogan, Z.
,
Charn, T.-H.
,
Jiang, Y.
,
Liu, E. T.
,
Katzenellenbogen, J. A.
,
Katzenellenbogen, B. S.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 3.74 MB
Your tags:
english, 2014
42
The HDAC interaction network
Livyatan, I.
,
Meshorer, E.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 124 KB
Your tags:
english, 2014
43
Temporal control of self-organized pattern formation without morphogen gradients in bacteria
Payne, S.
,
Li, B.
,
Cao, Y.
,
Schaeffer, D.
,
Ryser, M. D.
,
You, L.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 279 KB
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english, 2014
44
RNAi screening reveals a large signaling network controlling the Golgi apparatus in human cells
Chia, J.
,
Goh, G.
,
Racine, V.
,
Ng, S.
,
Kumar, P.
,
Bard, F.
Journal:
Molecular Systems Biology
Year:
2014
File:
PDF, 44 KB
Your tags:
2014
45
Dissection of a Krox20 positive feedback loop driving cell fate choices in hindbrain patterning
Bouchoucha, Y. X.
,
Reingruber, J.
,
Labalette, C.
,
Wassef, M. A.
,
Thierion, E.
,
Desmarquet-Trin Dinh, C.
,
Holcman, D.
,
Gilardi-Hebenstreit, P.
,
Charnay, P.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 2.50 MB
Your tags:
english, 2014
46
Timescales and bottlenecks in miRNA-dependent gene regulation
Hausser, J.
,
Syed, A. P.
,
Selevsek, N.
,
van Nimwegen, E.
,
Jaskiewicz, L.
,
Aebersold, R.
,
Zavolan, M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 801 KB
Your tags:
english, 2014
47
Widespread splicing changes in human brain development and aging
Mazin, P.
,
Xiong, J.
,
Liu, X.
,
Yan, Z.
,
Zhang, X.
,
Li, M.
,
He, L.
,
Somel, M.
,
Yuan, Y.
,
Phoebe Chen, Y.-P.
,
Li, N.
,
Hu, Y.
,
Fu, N.
,
Ning, Z.
,
Zeng, R.
,
Yang, H.
,
Chen, W.
,
Gelfand, M.
,
Khaitovich, P.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 592 KB
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english, 2014
48
A pharmaco-epistasis strategy reveals a new cell size controlling pathway in yeast
Moretto, F.
,
Sagot, I.
,
Daignan-Fornier, B.
,
Pinson, B.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 682 KB
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english, 2014
49
The Neurospora photoreceptor VIVID exerts negative and positive control on light sensing to achieve adaptation
Gin, E.
,
Diernfellner, A. C. R.
,
Brunner, M.
,
Hofer, T.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 244 KB
Your tags:
english, 2014
50
Sequential induction of auxin efflux and influx carriers regulates lateral root emergence
Peret, B.
,
Middleton, A. M.
,
French, A. P.
,
Larrieu, A.
,
Bishopp, A.
,
Njo, M.
,
Wells, D. M.
,
Porco, S.
,
Mellor, N.
,
Band, L. R.
,
Casimiro, I.
,
Kleine-Vehn, J.
,
Vanneste, S.
,
Sairanen, I.
,
Mallet, R.
,
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 614 KB
Your tags:
english, 2014
51
Systematic identification of proteins that elicit drug side effects
Kuhn, M.
,
Al Banchaabouchi, M.
,
Campillos, M.
,
Jensen, L. J.
,
Gross, C.
,
Gavin, A.-C.
,
Bork, P.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 204 KB
Your tags:
english, 2014
52
Chromosome segregation by the Escherichia coli Min system
Di Ventura, B.
,
Knecht, B.
,
Andreas, H.
,
Godinez, W. J.
,
Fritsche, M.
,
Rohr, K.
,
Nickel, W.
,
Heermann, D. W.
,
Sourjik, V.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 3.77 MB
Your tags:
english, 2014
53
Promoter decoding of transcription factor dynamics involves a trade-off between noise and control of gene expression
Hansen, A. S.
,
O{middle dot}Shea, E. K.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 1.66 MB
Your tags:
english, 2014
54
Glutamine-driven oxidative phosphorylation is a major ATP source in transformed mammalian cells in both normoxia and hypoxia
Fan, J.
,
Kamphorst, J. J.
,
Mathew, R.
,
Chung, M. K.
,
White, E.
,
Shlomi, T.
,
Rabinowitz, J. D.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 515 KB
Your tags:
english, 2014
55
Synthetic mammalian transgene negative autoregulation
Shimoga, V.
,
White, J. T.
,
Li, Y.
,
Sontag, E.
,
Bleris, L.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 194 KB
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english, 2014
56
Natural sequence variants of yeast environmental sensors confer cell-to-cell expression variability
Fehrmann, S.
,
Bottin-Duplus, H.
,
Leonidou, A.
,
Mollereau, E.
,
Barthelaix, A.
,
Wei, W.
,
Steinmetz, L. M.
,
Yvert, G.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
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57
Human disease locus discovery and mapping to molecular pathways through phylogenetic profiling
Tabach, Y.
,
Golan, T.
,
Hernandez-Hernandez, A.
,
Messer, A. R.
,
Fukuda, T.
,
Kouznetsova, A.
,
Liu, J.-G.
,
Lilienthal, I.
,
Levy, C.
,
Ruvkun, G.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
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PDF, 1.34 MB
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58
Imaging the transcriptome
Lionnet, T.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 400 KB
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59
Insulin/IGF-1-mediated longevity is marked by reduced protein metabolism
Stout, G. J.
,
Stigter, E. C. A.
,
Essers, P. B.
,
Mulder, K. W.
,
Kolkman, A.
,
Snijders, D. S.
,
van den Broek, N. J. F.
,
Betist, M. C.
,
Korswagen, H. C.
,
MacInnes, A. W.
,
Brenkman, A. B.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
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PDF, 235 KB
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60
Autonomous bacterial localization and gene expression based on nearby cell receptor density
Wu, H.-C.
,
Tsao, C.-Y.
,
Quan, D. N.
,
Cheng, Y.
,
Servinsky, M. D.
,
Carter, K. K.
,
Jee, K. J.
,
Terrell, J. L.
,
Zargar, A.
,
Rubloff, G. W.
,
Payne, G. F.
,
Valdes, J. J.
,
Bentley, W. E.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
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PDF, 398 KB
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61
Metabolic reconstruction identifies strain-specific regulation of virulence in Toxoplasma gondii
Song, C.
,
Chiasson, M. A.
,
Nursimulu, N.
,
Hung, S. S.
,
Wasmuth, J.
,
Grigg, M. E.
,
Parkinson, J.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
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PDF, 1.04 MB
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62
Apoptosis and other immune biomarkers predict influenza vaccine responsiveness
Furman, D.
,
Jojic, V.
,
Kidd, B.
,
Shen-Orr, S.
,
Price, J.
,
Jarrell, J.
,
Tse, T.
,
Huang, H.
,
Lund, P.
,
Maecker, H. T.
,
Utz, P. J.
,
Dekker, C. L.
,
Koller, D.
,
Davis, M. M.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 51 KB
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63
A map of cell type-specific auxin responses
Bargmann, B. O. R.
,
Vanneste, S.
,
Krouk, G.
,
Nawy, T.
,
Efroni, I.
,
Shani, E.
,
Choe, G.
,
Friml, J.
,
Bergmann, D. C.
,
Estelle, M.
,
Birnbaum, K. D.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 3.11 MB
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64
Global remodelling of cellular microenvironment due to loss of collagen VII
Kuttner, V.
,
Mack, C.
,
Rigbolt, K. T.
,
Kern, J. S.
,
Schilling, O.
,
Busch, H.
,
Bruckner-Tuderman, L.
,
Dengjel, J.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 781 KB
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65
A yeast one-hybrid and microfluidics-based pipeline to map mammalian gene regulatory networks
Gubelmann, Carine
,
Waszak, Sebastian M
,
Isakova, Alina
,
Holcombe, Wiebke
,
Hens, Korneel
,
Iagovitina, Antonina
,
Feuz, Jean-Daniel
,
Raghav, Sunil K
,
Simicevic, Jovan
,
Deplancke, Bart
Journal:
Molecular Systems Biology
Year:
2013
Language:
english
File:
PDF, 3.68 MB
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english, 2013
66
Deconvolving the roles of Wnt ligands and receptors in sensing and amplification
Tan, R. Z.
,
Ji, N.
,
Mentink, R. A.
,
Korswagen, H. C.
,
van Oudenaarden, A.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 515 KB
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67
Promoters maintain their relative activity levels under different growth conditions
Keren, L.
,
Zackay, O.
,
Lotan-Pompan, M.
,
Barenholz, U.
,
Dekel, E.
,
Sasson, V.
,
Aidelberg, G.
,
Bren, A.
,
Zeevi, D.
,
Weinberger, A.
,
Alon, U.
,
Milo, R.
,
Segal, E.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 727 KB
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68
Phosphoproteome dynamics reveal novel ERK1/2 MAP kinase substrates with broad spectrum of functions
Courcelles, M.
,
Fremin, C.
,
Voisin, L.
,
Lemieux, S.
,
Meloche, S.
,
Thibault, P.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 952 KB
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69
Perturbation of the mutated EGFR interactome identifies vulnerabilities and resistance mechanisms
Li, J.
,
Bennett, K.
,
Stukalov, A.
,
Fang, B.
,
Zhang, G.
,
Yoshida, T.
,
Okamoto, I.
,
Kim, J.-Y.
,
Song, L.
,
Bai, Y.
,
Qian, X.
,
Rawal, B.
,
Schell, M.
,
Grebien, F.
,
Winter, G.
,
Rix, U.
,
Eschrich, S.
,
Coling
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 3.29 MB
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70
Efficient translation initiation dictates codon usage at gene start
Bentele, K.
,
Saffert, P.
,
Rauscher, R.
,
Ignatova, Z.
,
Bluthgen, N.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 634 KB
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71
Root systems analysis branches out
Palme, K.
,
Teale, W.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 115 KB
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english, 2014
72
Transcriptional regulation is insufficient to explain substrate-induced flux changes in Bacillus subtilis
Chubukov, V.
,
Uhr, M.
,
Le Chat, L.
,
Kleijn, R. J.
,
Jules, M.
,
Link, H.
,
Aymerich, S.
,
Stelling, J.
,
Sauer, U.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 574 KB
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english, 2014
73
A negative genetic interaction map in isogenic cancer cell lines reveals cancer cell vulnerabilities
Vizeacoumar, F. J.
,
Arnold, R.
,
Vizeacoumar, F. S.
,
Chandrashekhar, M.
,
Buzina, A.
,
Young, J. T. F.
,
Kwan, J. H. M.
,
Sayad, A.
,
Mero, P.
,
Lawo, S.
,
Tanaka, H.
,
Brown, K. R.
,
Baryshnikova, A.
,
Mak, A.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 9.87 MB
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english, 2014
74
Evolution and functional cross-talk of protein post-translational modifications
Beltrao, Pedro
,
Bork, Peer
,
Krogan, Nevan J.
,
van Noort, Vera
Journal:
Molecular Systems Biology
Year:
2013
Language:
english
File:
PDF, 1.18 MB
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english, 2013
75
Protein synthesis rate is the predominant regulator of protein expression during differentiation
Kristensen, A. R.
,
Gsponer, J.
,
Foster, L. J.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 678 KB
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english, 2014
76
Dissecting the energy metabolism in Mycoplasma pneumoniae through genome-scale metabolic modeling
Wodke, J. A. H.
,
Pucha ka, J.
,
Lluch-Senar, M.
,
Marcos, J.
,
Yus, E.
,
Godinho, M.
,
Gutierrez-Gallego, R.
,
dos Santos, V. A. P. M.
,
Serrano, L.
,
Klipp, E.
,
Maier, T.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 495 KB
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english, 2014
77
Dissecting specific and global transcriptional regulation of bacterial gene expression
Gerosa, L.
,
Kochanowski, K.
,
Heinemann, M.
,
Sauer, U.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 462 KB
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english, 2014
78
Integration of clinical data with a genome-scale metabolic model of the human adipocyte
Mardinoglu, A.
,
Agren, R.
,
Kampf, C.
,
Asplund, A.
,
Nookaew, I.
,
Jacobson, P.
,
Walley, A. J.
,
Froguel, P.
,
Carlsson, L. M.
,
Uhlen, M.
,
Nielsen, J.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 756 KB
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english, 2014
79
Design of orthogonal genetic switches based on a crosstalk map of s, anti- s, and promoters
Rhodius, V. A.
,
Segall-Shapiro, T. H.
,
Sharon, B. D.
,
Ghodasara, A.
,
Orlova, E.
,
Tabakh, H.
,
Burkhardt, D. H.
,
Clancy, K.
,
Peterson, T. C.
,
Gross, C. A.
,
Voigt, C. A.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 327 KB
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english, 2014
80
Interaction proteome of human Hippo signaling: modular control of the co-activator YAP1
Hauri, Simon
,
Wepf, Alexander
,
van Drogen, Audrey
,
Varjosalo, Markku
,
Tapon, Nic
,
Aebersold, Ruedi
,
Gstaiger, Matthias
Journal:
Molecular Systems Biology
Year:
2013
Language:
english
File:
PDF, 915 KB
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english, 2013
81
Increasing population growth by asymmetric segregation of a limiting resource during cell division
Avraham, N.
,
Soifer, I.
,
Carmi, M.
,
Barkai, N.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 359 KB
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english, 2014
82
Bacterial cheating drives the population dynamics of cooperative antibiotic resistance plasmids
Yurtsev, Eugene A
,
Chao, Hui Xiao
,
Datta, Manoshi S
,
Artemova, Tatiana
,
Gore, Jeff
Journal:
Molecular Systems Biology
Year:
2013
Language:
english
File:
PDF, 1.47 MB
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english, 2013
83
Targeted proteomics reveals strain-specific changes in the mouse insulin and central metabolic pathways after a sustained high-fat diet
Sabido, E.
,
Wu, Y.
,
Bautista, L.
,
Porstmann, T.
,
Chang, C.-Y.
,
Vitek, O.
,
Stoffel, M.
,
Aebersold, R.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 343 KB
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english, 2014
84
Barriers to transmission of transcriptional noise in a c-fos c-jun pathway
Shah, K.
,
Tyagi, S.
Journal:
Molecular Systems Biology
Year:
2014
Language:
english
File:
PDF, 20.81 MB
Your tags:
english, 2014
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