Volume 10; Issue 9

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Nature Protocols
Volume 10; Issue 9

Nature Protocols

Volume 10; Issue 9

1

Population-specific genotype imputations using minimac or IMPUTE2

van Leeuwen, Elisabeth M, Kanterakis, Alexandros, Deelen, Patrick, Kattenberg, Mathijs V, Abdellaoui, Abdel, Hofman, Albert, Schönhuth, Alexander, Kanterakis, Alexandros, Menelaou, Androniki, de Craen

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 466 KB

english, 2015

2

A flow cytometry–based method to simplify the analysis and quantification of protein association to chromatin in mammalian cells

Forment, Josep V, Jackson, Stephen P

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 816 KB

english, 2015

3

Complementary IMAC enrichment methods for HLA-associated phosphopeptide identification by mass spectrometry

Abelin, Jennifer G, Trantham, Paisley D, Penny, Sarah A, Patterson, Andrea M, Ward, Stephen T, Hildebrand, William H, Cobbold, Mark, Bai, Dina L, Shabanowitz, Jeffrey, Hunt, Donald F

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 1002 KB

english, 2015

4

In vitro bioengineered model of cortical brain tissue

Chwalek, Karolina, Tang-Schomer, Min D, Omenetto, Fiorenzo G, Kaplan, David L

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 2.43 MB

english, 2015

5

The PURE system for the cell-free synthesis of membrane proteins

Kuruma, Yutetsu, Ueda, Takuya

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 1.96 MB

english, 2015

6

Cardiac differentiation of human pluripotent stem cells in scalable suspension culture

Kempf, Henning, Kropp, Christina, Olmer, Ruth, Martin, Ulrich, Zweigerdt, Robert

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 3.04 MB

english, 2015

7

Quantitative measurement of transcriptional inhibition and mutagenesis induced by site-specifically incorporated DNA lesions in vitro and in vivo

You, Changjun, Wang, Yinsheng

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 1.37 MB

english, 2015

8

Proteome-wide identification of SUMO modification sites by mass spectrometry

Tammsalu, Triin, Matic, Ivan, Jaffray, Ellis G, Ibrahim, Adel F M, Tatham, Michael H, Hay, Ronald T

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 1.06 MB

english, 2015

9

Defining human dendritic cell progenitors by multiparametric flow cytometry

Breton, Gaëlle, Lee, Jaeyop, Liu, Kang, Nussenzweig, Michel C

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 1.44 MB

english, 2015

10

Molecular characterization of neuronal cell types based on patterns of projection with Retro-TRAP

Nectow, Alexander R, Ekstrand, Mats I, Friedman, Jeffrey M

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 558 KB

english, 2015

11

X-ray structure determination using low-resolution electron microscopy maps for molecular replacement

Jackson, Ryan N, McCoy, Airlie J, Terwilliger, Thomas C, Read, Randy J, Wiedenheft, Blake

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 975 KB

english, 2015

12

Direct metabolomics for plant cells by live single-cell mass spectrometry

Fujii, Takashi, Matsuda, Shuichi, Tejedor, Mónica Lorenzo, Esaki, Tsuyoshi, Sakane, Iwao, Mizuno, Hajime, Tsuyama, Naohiro, Masujima, Tsutomu

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 2.80 MB

english, 2015

13

Genome-wide mapping of embedded ribonucleotides and other noncanonical nucleotides using emRiboSeq and EndoSeq

Ding, James, Taylor, Martin S, Jackson, Andrew P, Reijns, Martin A M

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 719 KB

english, 2015

14

One-step 18F labeling of biomolecules using organotrifluoroborates

Liu, Zhibo, Lin, Kuo-Shyan, Bénard, François, Pourghiasian, Maral, Kiesewetter, Dale O, Perrin, David M, Chen, Xiaoyuan

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 696 KB

english, 2015

15

Corrigendum: Measuring mRNA copy number in individual Escherichia coli cells using single-molecule fluorescent in situ hybridization

Skinner, Samuel O, Sepúlveda, Leonardo A, Xu, Heng, Golding, Ido

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 426 KB

english, 2015

16

Corrigendum: Gas chromatography mass spectrometry–based metabolite profiling in plants

Lisec, Jan, Schauer, Nicolas, Kopka, Joachim, Willmitzer, Lothar, Fernie, Alisdair R

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 426 KB

english, 2015

17

Corrigendum: Primary culture of ovarian surface epithelial cells and ascites-derived ovarian cancer cells from patients

Shepherd, Trevor G, Thériault, Brigitte L, Campbell, Elizabeth J, Nachtigal, Mark W

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 426 KB

english, 2015

18

Corrigendum: Efficient derivation and inducible differentiation of expandable skeletal myogenic cells from human ES and patient-specific iPS cells

Maffioletti, Sara M, Gerli, Mattia F M, Ragazzi, Martina, Dastidar, Sumitava, Benedetti, Sara, Loperfido, Mariana, VandenDriessche, Thierry, Chuah, Marinee K, Tedesco, Francesco Saverio

Journal:

Nature Protocols

Year:

2015

Language:

english

File:

PDF, 426 KB

english, 2015