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Volume 35; Issue 7
Main
Nucleic Acids Research
Volume 35; Issue 7
Nucleic Acids Research
Volume 35; Issue 7
1
USER fusion: a rapid and efficient method for simultaneous fusion and cloning of multiple PCR products
Geu-Flores, F.
,
Nour-Eldin, H. H.
,
Nielsen, M. T.
,
Halkier, B. A.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 2.23 MB
Your tags:
english, 2007
2
The neutrophil-activating Dps protein of Helicobacter pylori, HP-NAP, adopts a mechanism different from Escherichia coli Dps to bind and condense DNA
Ceci, P.
,
Mangiarotti, L.
,
Rivetti, C.
,
Chiancone, E.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 3.15 MB
Your tags:
english, 2007
3
Epigenetic disruption of ribosomal RNA genes and nucleolar architecture in DNA methyltransferase 1 (Dnmt1) deficient cells
Espada, J.
,
Ballestar, E.
,
Santoro, R.
,
Fraga, M. F.
,
Villar-Garea, A.
,
Nemeth, A.
,
Lopez-Serra, L.
,
Ropero, S.
,
Aranda, A.
,
Orozco, H.
,
Moreno, V.
,
Juarranz, A.
,
Stockert, J. C.
,
Langst, G.
,
Grummt,
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 494 KB
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english, 2007
4
Site-directed transposon integration in human cells
Yant, S. R.
,
Huang, Y.
,
Akache, B.
,
Kay, M. A.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 3.29 MB
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english, 2007
5
Reversible gene knockdown in mice using a tight, inducible shRNA expression system
Seibler, J.
,
Kleinridders, A.
,
Kuter-Luks, B.
,
Niehaves, S.
,
Bruning, J. C.
,
Schwenk, F.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 391 KB
Your tags:
english, 2007
6
Graph-based identification of cancer signaling pathways from published gene expression signatures using PubLiME
Finocchiaro, G.
,
Mancuso, F. M.
,
Cittaro, D.
,
Muller, H.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 8.43 MB
Your tags:
english, 2007
7
The protein that binds to DNA base J in trypanosomatids has features of a thymidine hydroxylase
Yu, Z.
,
Genest, P.-A.
,
ter Riet, B.
,
Sweeney, K.
,
DiPaolo, C.
,
Kieft, R.
,
Christodoulou, E.
,
Perrakis, A.
,
Simmons, J. M.
,
Hausinger, R. P.
,
van Luenen, H. G.A.M.
,
Rigden, D. J.
,
Sabatini, R.
,
Borst,
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 2.24 MB
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english, 2007
8
Deciphering RNA structural diversity and systematic phylogeny from microbial metagenomes
Zhu, Y.
,
Pulukkunat, D. K.
,
Li, Y.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 2.07 MB
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english, 2007
9
Structure of the intramolecular human telomeric G-quadruplex in potassium solution: a novel adenine triple formation
Dai, J.
,
Punchihewa, C.
,
Ambrus, A.
,
Chen, D.
,
Jones, R. A.
,
Yang, D.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 3.67 MB
Your tags:
english, 2007
10
Multiplex amplification of all coding sequences within 10 cancer genes by Gene-Collector
Fredriksson, S.
,
Baner, J.
,
Dahl, F.
,
Chu, A.
,
Ji, H.
,
Welch, K.
,
Davis, R. W.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 142 KB
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english, 2007
11
Consensus sequences improve PSI-BLAST through mimicking profile-profile alignments
Przybylski, D.
,
Rost, B.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 244 KB
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english, 2007
12
Molecular mechanism of upregulation of survivin transcription by the AT-rich DNA-binding ligand, Hoechst33342: evidence for survivin involvement in drug resistance
Wu, J.
,
Apontes, P.
,
Song, L.
,
Liang, P.
,
Yang, L.
,
Li, F.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 5.04 MB
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english, 2007
13
A novel microarray approach reveals new tissue-specific signatures of known and predicted mammalian microRNAs
Beuvink, I.
,
Kolb, F. A.
,
Budach, W.
,
Garnier, A.
,
Lange, J.
,
Natt, F.
,
Dengler, U.
,
Hall, J.
,
Filipowicz, W.
,
Weiler, J.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 4.92 MB
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english, 2007
14
Structural insight into repair of alkylated DNA by a new superfamily of DNA glycosylases comprising HEAT-like repeats
Dalhus, B.
,
Helle, I. H.
,
Backe, P. H.
,
Alseth, I.
,
Rognes, T.
,
Bjoras, M.
,
Laerdahl, J. K.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 3.70 MB
Your tags:
english, 2007
15
The C-terminal domain of the Escherichia coli RNA polymerase subunit plays a role in the CI-dependent activation of the bacteriophage pM promoter
Kedzierska, B.
,
Szambowska, A.
,
Herman-Antosiewicz, A.
,
Lee, D. J.
,
Busby, S. J.W.
,
Wegrzyn, G.
,
Thomas, M. S.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 1.14 MB
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english, 2007
16
Transactivation of a DR-1 PPRE by a human constitutive androstane receptor variant expressed from internal protein translation start sites
Stoner, M. A.
,
Auerbach, S. S.
,
Zamule, S. M.
,
Strom, S. C.
,
Omiecinski, C. J.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 4.47 MB
Your tags:
english, 2007
17
Orphan nuclear receptor TR2, a mediator of preadipocyte proliferation, is differentially regulated by RA through exchange of coactivator PCAF with corepressor RIP140 on a platform molecule GRIP1
Gupta, P.
,
Park, S. W.
,
Farooqui, M.
,
Wei, L.-N.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 4.58 MB
Your tags:
english, 2007
18
Ribosomal protein S1 influences trans-translation in vitro and in vivo
Saguy, M.
,
Gillet, R.
,
Skorski, P.
,
Hermann-Le Denmat, S.
,
Felden, B.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 241 KB
Your tags:
english, 2007
19
Regulation of histone H3K4 tri-methylation and PAF complex recruitment by the Ccr4-Not complex
Mulder, K. W.
,
Brenkman, A. B.
,
Inagaki, A.
,
van den Broek, N. J. F.
,
Marc Timmers, H. Th.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 3.96 MB
Your tags:
english, 2007
20
Entropically-driven binding of mithramycin in the minor groove of C/G-rich DNA sequences
Barcelo, F.
,
Scotta, C.
,
Ortiz-Lombardia, M.
,
Mendez, C.
,
Salas, J. A.
,
Portugal, J.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 1.89 MB
Your tags:
english, 2007
21
Restriction endonuclease BpuJI specific for the 5'-CCCGT sequence is related to the archaeal Holliday junction resolvase family
Sukackaite, R.
,
Lagunavicius, A.
,
Stankevicius, K.
,
Urbanke, C.
,
Venclovas, C.
,
Siksnys, V.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 3.51 MB
Your tags:
english, 2007
22
RNase T1 mimicking artificial ribonuclease
Mironova, N. L.
,
Pyshnyi, D. V.
,
Shtadler, D. V.
,
Fedorova, A. A.
,
Vlassov, V. V.
,
Zenkova, M. A.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 2.79 MB
Your tags:
english, 2007
23
Improving comparability between microarray probe signals by thermodynamic intensity correction
Bruun, G. M.
,
Wernersson, R.
,
Juncker, A. S.
,
Willenbrock, H.
,
Nielsen, H. B.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 175 KB
Your tags:
english, 2007
24
Hierarchical classification of functionally equivalent genes in prokaryotes
Wu, H.
,
Mao, F.
,
Olman, V.
,
Xu, Y.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 5.36 MB
Your tags:
english, 2007
25
A non-covalent peptide-based carrier for in vivo delivery of DNA mimics
Morris, M. C.
,
Gros, E.
,
Aldrian-Herrada, G.
,
Choob, M.
,
Archdeacon, J.
,
Heitz, F.
,
Divita, G.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 593 KB
Your tags:
english, 2007
26
ElrA binding to the 3'UTR of cyclin E1 mRNA requires polyadenylation elements
Slevin, M. K.
,
Gourronc, F.
,
Hartley, R. S.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 5.46 MB
Your tags:
english, 2007
27
Ribosomal RNA guanine-(N2)-methyltransferases and their targets
Sergiev, P. V.
,
Bogdanov, A. A.
,
Dontsova, O. A.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 2.16 MB
Your tags:
english, 2007
28
Telomeric localization of the modified DNA base J in the genome of the protozoan parasite Leishmania
Genest, P.-A.
,
ter Riet, B.
,
Cijsouw, T.
,
van Luenen, H. G.A.M.
,
Borst, P.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 2.95 MB
Your tags:
english, 2007
29
Formation of 8-oxo-7,8-dihydroguanine-radicals in -irradiated DNA by multiple one-electron oxidations
Shukla, L. I.
,
Adhikary, A.
,
Pazdro, R.
,
Becker, D.
,
Sevilla, M. D.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 2.62 MB
Your tags:
english, 2007
30
Array-based profiling of reference-independent methylation status (aPRIMES) identifies frequent promoter methylation and consecutive downregulation of ZIC2 in pediatric medulloblastoma
Pfister, S.
,
Schlaeger, C.
,
Mendrzyk, F.
,
Wittmann, A.
,
Benner, A.
,
Kulozik, A.
,
Scheurlen, W.
,
Radlwimmer, B.
,
Lichter, P.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 6.60 MB
Your tags:
english, 2007
31
Dynamic binding of Ku80, Ku70 and NF90 to the IL-2 promoter in vivo in activated T-cells
Shi, L.
,
Qiu, D.
,
Zhao, G.
,
Corthesy, B.
,
Lees-Miller, S.
,
Reeves, W. H.
,
Kao, P. N.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 3.95 MB
Your tags:
english, 2007
32
Bioinformatic prediction and experimental verification of Fur-regulated genes in the extreme acidophile Acidithiobacillus ferrooxidans
Quatrini, R.
,
Lefimil, C.
,
Veloso, F. A.
,
Pedroso, I.
,
Holmes, D. S.
,
Jedlicki, E.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 1.02 MB
Your tags:
english, 2007
33
The L1Tc non-LTR retrotransposon of Trypanosoma cruzi contains an internal RNA-pol II-dependent promoter that strongly activates gene transcription and generates unspliced transcripts
Heras, S. R.
,
Lopez, M. C.
,
Olivares, M.
,
Thomas, M. C.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 2.71 MB
Your tags:
english, 2007
34
Analysis of the role of Aurora B on the chromosomal targeting of condensin I
Takemoto, A.
,
Murayama, A.
,
Katano, M.
,
Urano, T.
,
Furukawa, K.
,
Yokoyama, S.
,
Yanagisawa, J.
,
Hanaoka, F.
,
Kimura, K.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 4.27 MB
Your tags:
english, 2007
35
Conserved interactions of the splicing factor Ntr1/Spp382 with proteins involved in DNA double-strand break repair and telomere metabolism
Herrmann, G.
,
Kais, S.
,
Hoffbauer, J.
,
Shah-Hosseini, K.
,
Bruggenolte, N.
,
Schober, H.
,
Fasi, M.
,
Schar, P.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 8.44 MB
Your tags:
english, 2007
36
Trans-splicing of the Ll.LtrB group II intron in Lactococcus lactis
Belhocine, K.
,
Mak, A. B.
,
Cousineau, B.
Journal:
Nucleic Acids Research
Year:
2007
Language:
english
File:
PDF, 589 KB
Your tags:
english, 2007
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