Volume 36; Issue 14

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Nucleic Acids Research
Volume 36; Issue 14

Nucleic Acids Research

Volume 36; Issue 14

1

Features of 80S mammalian ribosome and its subunits

Budkevich, T. V., El'skaya, A. V., Nierhaus, K. H.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 3.33 MB

english, 2008

2

DNA methylation analysis by digital bisulfite genomic sequencing and digital MethyLight

Weisenberger, D. J., Trinh, B. N., Campan, M., Sharma, S., Long, T. I., Ananthnarayan, S., Liang, G., Esteva, F. J., Hortobagyi, G. N., McCormick, F., Jones, P. A., Laird, P. W.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 5.61 MB

english, 2008

3

In vitro selection of small RNA-cleaving deoxyribozymes that cleave pyrimidine-pyrimidine junctions

Schlosser, K., Gu, J., Lam, J. C. F., Li, Y.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 7.02 MB

english, 2008

4

A protein-DNA docking benchmark

van Dijk, M., Bonvin, A. M. J. J.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 390 KB

english, 2008

5

Development of an isoform-specific gene suppression system: the study of the human Pax-5B transcriptional element

Robichaud, G. A., Perreault, J.-P., Ouellette, R. J.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 453 KB

english, 2008

6

Rapid and efficient construction of markerless deletions in the Escherichia coli genome

Yu, B. J., Kang, K. H., Lee, J. H., Sung, B. H., Kim, M. S., Kim, S. C.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 2.49 MB

english, 2008

7

Human DDX3 functions in translation and interacts with the translation initiation factor eIF3

Lee, C.-S., Dias, A. P., Jedrychowski, M., Patel, A. H., Hsu, J. L., Reed, R.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 3.48 MB

english, 2008

8

Phosphorylation of the carboxy-terminal domain of histone H1: effects on secondary structure and DNA condensation

Roque, A., Ponte, I., Arrondo, J. L. R., Suau, P.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 2.04 MB

english, 2008

9

Efficient transfer of base changes from a vector to the rice genome by homologous recombination: involvement of heteroduplex formation and mismatch correction

Johzuka-Hisatomi, Y., Terada, R., Iida, S.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 536 KB

english, 2008

10

Highly sensitive and specific microRNA expression profiling using BeadArray technology

Chen, J., Lozach, J., Garcia, E. W., Barnes, B., Luo, S., Mikoulitch, I., Zhou, L., Schroth, G., Fan, J.-B.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 2.05 MB

english, 2008

11

MicroRNA regulation and the variability of human cortical gene expression

Zhang, R., Su, B.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 1.66 MB

english, 2008

12

Efficient delivery of RNA Interference to peripheral neurons in vivo using herpes simplex virus

Anesti, A.-M., Peeters, P. J., Royaux, I., Coffin, R. S.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 10.23 MB

english, 2008

13

Revealing unique properties of the ribosome using a network based analysis

David-Eden, H., Mandel-Gutfreund, Y.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 4.76 MB

english, 2008

14

A new method for robust quantitative and qualitative analysis of real-time PCR

Shain, E. B., Clemens, J. M.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 333 KB

english, 2008

15

Hit selection with false discovery rate control in genome-scale RNAi screens

Zhang, X. D., Kuan, P. F., Ferrer, M., Shu, X., Liu, Y. C., Gates, A. T., Kunapuli, P., Stec, E. M., Xu, M., Marine, S. D., Holder, D. J., Strulovici, B., Heyse, J. F., Espeseth, A. S.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 2.10 MB

english, 2008

16

Dissecting direct and indirect readout of cAMP receptor protein DNA binding using an inosine and 2,6-diaminopurine in vitro selection system

Lindemose, S., Nielsen, P. E., Mollegaard, N. E.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 903 KB

english, 2008

17

Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding

Kumarevel, T., Nakano, N., Ponnuraj, K., Gopinath, S. C. B., Sakamoto, K., Shinkai, A., Kumar, P. K. R., Yokoyama, S.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 2.56 MB

english, 2008

18

RNA secondary structure of the feline immunodeficiency virus 5'UTR and Gag coding region

James, L., Sargueil, B.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 1.14 MB

english, 2008

19

The conserved N-terminal basic residues and zinc-finger motifs of HIV-1 nucleocapsid restrict the viral cDNA synthesis during virus formation and maturation

Didierlaurent, L., Houzet, L., Morichaud, Z., Darlix, J.-L., Mougel, M.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 1.70 MB

english, 2008

20

Inhibition of Mg2+ binding and DNA religation by bacterial topoisomerase I via introduction of an additional positive charge into the active site region

Sorokin, E. P., Cheng, B., Rathi, S., Aedo, S. J., Abrenica, M. V., Tse-Dinh, Y.-C.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 3.65 MB

english, 2008

21

Processing of triplex-directed psoralen DNA interstrand crosslinks by recombination mechanisms

Liu, Y., Nairn, R. S., Vasquez, K. M.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 451 KB

english, 2008

22

Survey of group I and group II introns in 29 sequenced genomes of the Bacillus cereus group: insights into their spread and evolution

Tourasse, N. J., Kolsto, A.-B.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 3.96 MB

english, 2008

23

The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition

Nagata, T., Suzuki, S., Endo, R., Shirouzu, M., Terada, T., Inoue, M., Kigawa, T., Kobayashi, N., Guntert, P., Tanaka, A., Hayashizaki, Y., Muto, Y., Yokoyama, S.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 4.12 MB

english, 2008

24

Light activation of transcription: photocaging of nucleotides for control over RNA polymerization

Pinheiro, A. V., Baptista, P., Lima, J. C.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 2.84 MB

english, 2008

25

The role of transcriptional activator GATA-1 at human -globin HS2

Cho, Y., Song, S.-H., Lee, J. J., Choi, N., Kim, C. G., Dean, A., Kim, A.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 188 KB

english, 2008

26

Spatial configuration of the chicken -globin gene domain: immature and active chromatin hubs

Gavrilov, A. A., Razin, S. V.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 6.02 MB

english, 2008

27

Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing

Wederell, E. D., Bilenky, M., Cullum, R., Thiessen, N., Dagpinar, M., Delaney, A., Varhol, R., Zhao, Y., Zeng, T., Bernier, B., Ingham, M., Hirst, M., Robertson, G., Marra, M. A., Jones, S., Hoodless,

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 10.00 MB

english, 2008

28

Partial reconstitution of DNA large loop repair with purified proteins from Saccharomyces cerevisiae

Sommer, D., Stith, C. M., Burgers, P. M. J., Lahue, R. S.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 2.92 MB

english, 2008

29

Multiple segmental and selective isotope labeling of large RNA for NMR structural studies

Nelissen, F. H. T., van Gammeren, A. J., Tessari, M., Girard, F. C., Heus, H. A., Wijmenga, S. S.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 2.98 MB

english, 2008