Volume 38; Issue 12

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Nucleic Acids Research
Volume 38; Issue 12

Nucleic Acids Research

Volume 38; Issue 12

1

Biases in Illumina transcriptome sequencing caused by random hexamer priming

Hansen, K. D., Brenner, S. E., Dudoit, S.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 555 KB

english, 2010

2

Multiple small RNAs identified in Mycobacterium bovis BCG are also expressed in Mycobacterium tuberculosis and Mycobacterium smegmatis

DiChiara, J. M., Contreras-Martinez, L. M., Livny, J., Smith, D., McDonough, K. A., Belfort, M.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 1.80 MB

english, 2010

3

The crystal structure of unmodified tRNAPhe from Escherichia coli

Byrne, R. T., Konevega, A. L., Rodnina, M. V., Antson, A. A.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 6.78 MB

english, 2010

4

Robustness and modularity properties of a non-covalent DNA catalytic reaction

Zhang, D. Y., Winfree, E.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 1.66 MB

english, 2010

5

Trinucleotide repeats in human genome and exome

Kozlowski, P., de Mezer, M., Krzyzosiak, W. J.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 13.35 MB

english, 2010

6

Development of a repressible mycobacterial promoter system based on two transcriptional repressors

Boldrin, F., Casonato, S., Dainese, E., Sala, C., Dhar, N., Palu, G., Riccardi, G., Cole, S. T., Manganelli, R.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 670 KB

english, 2010

7

Inclusion of neighboring base interdependencies substantially improves genome-wide prokaryotic transcription factor binding site prediction

Salama, R. A., Stekel, D. J.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 7.24 MB

english, 2010

8

Directed evolution of recombinase specificity by split gene reassembly

Gersbach, C. A., Gaj, T., Gordley, R. M., Barbas, C. F.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 5.19 MB

english, 2010

9

Dissecting the influence of Mg2+ on 3D architecture and ligand-binding of the guanine-sensing riboswitch aptamer domain

Buck, J., Noeske, J., Wohnert, J., Schwalbe, H.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 3.50 MB

english, 2010

10

Detection of novel recombinases in bacteriophage genomes unveils Rad52, Rad51 and Gp2.5 remote homologs

Lopes, A., Amarir-Bouhram, J., Faure, G., Petit, M.-A., Guerois, R.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 2.83 MB

english, 2010

11

Ab initio gene identification in metagenomic sequences

Zhu, W., Lomsadze, A., Borodovsky, M.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 13.43 MB

english, 2010

12

Somatic expression of LINE-1 elements in human tissues

Belancio, V. P., Roy-Engel, A. M., Pochampally, R. R., Deininger, P.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 5.77 MB

english, 2010

13

Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing

Birzele, F., Schaub, J., Rust, W., Clemens, C., Baum, P., Kaufmann, H., Weith, A., Schulz, T. W., Hildebrandt, T.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 3.01 MB

english, 2010

14

Binary particle swarm optimization for operon prediction

Chuang, L.-Y., Tsai, J.-H., Yang, C.-H.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 1.49 MB

english, 2010

15

Twisting of the DNA-binding surface by a -strand-bearing proline modulates DNA gyrase activity

Hsieh, T.-J., Yen, T.-J., Lin, T.-S., Chang, H.-T., Huang, S.-Y., Hsu, C.-H., Farh, L., Chan, N.-L.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 7.55 MB

english, 2010

16

Subscriptions

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 48 KB

english, 2010

17

Highly mutagenic and severely imbalanced dNTP pools can escape detection by the S-phase checkpoint

Kumar, D., Viberg, J., Nilsson, A. K., Chabes, A.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 6.32 MB

english, 2010

18

Regulation of base excision repair: Ntg1 nuclear and mitochondrial dynamic localization in response to genotoxic stress

Swartzlander, D. B., Griffiths, L. M., Lee, J., Degtyareva, N. P., Doetsch, P. W., Corbett, A. H.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 14.25 MB

english, 2010

19

Cleavage of the sarcin-ricin loop of 23S rRNA differentially affects EF-G and EF-Tu binding

Garcia-Ortega, L., Alvarez-Garcia, E., Gavilanes, J. G., Martinez-del-Pozo, A., Joseph, S.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 4.53 MB

english, 2010

20

Spatial, temporal and interindividual epigenetic variation of functionally important DNA methylation patterns

Schneider, E., Pliushch, G., El Hajj, N., Galetzka, D., Puhl, A., Schorsch, M., Frauenknecht, K., Riepert, T., Tresch, A., Muller, A. M., Coerdt, W., Zechner, U., Haaf, T.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 4.39 MB

english, 2010

21

Quantitative detection of 4-hydroxyequilenin-DNA adducts in mammalian cells using an immunoassay with a novel monoclonal antibody

Okahashi, Y., Iwamoto, T., Suzuki, N., Shibutani, S., Sugiura, S., Itoh, S., Nishiwaki, T., Ueno, S., Mori, T.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 1.22 MB

english, 2010

22

The large-scale organization of the bacterial network of ecological co-occurrence interactions

Freilich, S., Kreimer, A., Meilijson, I., Gophna, U., Sharan, R., Ruppin, E.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 361 KB

english, 2010

23

Posttranscriptional repression of the cel gene of the ColE7 operon by the RNA-binding protein CsrA of Escherichia coli

Yang, T.-Y., Sung, Y.-M., Lei, G.-S., Romeo, T., Chak, K.-F.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 5.05 MB

english, 2010

24

The impact of intragenic CpG content on gene expression

Bauer, A. P., Leikam, D., Krinner, S., Notka, F., Ludwig, C., Langst, G., Wagner, R.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 1.43 MB

english, 2010

25

Nucleic Acids Research

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 54 KB

english, 2010

26

Telomeric protein TRF2 protects Holliday junctions with telomeric arms from displacement by the Werner syndrome helicase

Nora, G. J., Buncher, N. A., Opresko, P. L.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 2.62 MB

english, 2010

27

A novel and simple micro-irradiation technique for creating localized DNA double-strand breaks

Suzuki, K., Yamauchi, M., Oka, Y., Suzuki, M., Yamashita, S.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 4.31 MB

english, 2010

28

Two thymidine hydroxylases differentially regulate the formation of glucosylated DNA at regions flanking polymerase II polycistronic transcription units throughout the genome of Trypanosoma brucei

Cliffe, L. J., Siegel, T. N., Marshall, M., Cross, G. A. M., Sabatini, R.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 2.18 MB

english, 2010

29

High accuracy operon prediction method based on STRING database scores

Taboada, B., Verde, C., Merino, E.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 8.04 MB

english, 2010

30

Identification of a structural element of the hepatitis C virus minus strand RNA involved in the initiation of RNA synthesis

Mahias, K., Ahmed-El-Sayed, N., Masante, C., Bitard, J., Staedel, C., Darfeuille, F., Ventura, M., Astier-Gin, T.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 871 KB

english, 2010

31

Heterodimerization of the human RNase P/MRP subunits Rpp20 and Rpp25 is a prerequisite for interaction with the P3 arm of RNase MRP RNA

Hands-Taylor, K. L. D., Martino, L., Tata, R., Babon, J. J., Bui, T. T., Drake, A. F., Beavil, R. L., Pruijn, G. J. M., Brown, P. R., Conte, M. R.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 6.53 MB

english, 2010

32

Nucleic Acids Research: VOLUME 38 ISSUE 12 2010

Journal:

Nucleic Acids Research

Year:

2010

File:

PDF, 21.40 MB

2010