Volume 39; Issue 18

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Nucleic Acids Research
Volume 39; Issue 18

Nucleic Acids Research

Volume 39; Issue 18

1

Quantification noise in single cell experiments

Reiter, M., Kirchner, B., Muller, H., Holzhauer, C., Mann, W., Pfaffl, M. W.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 538 KB

english, 2011

2

Modulation of the stability of the Salmonella fourU-type RNA thermometer

Rinnenthal, J., Klinkert, B., Narberhaus, F., Schwalbe, H.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 5.73 MB

english, 2011

3

Correction of the consequences of mitochondrial 3243A>G mutation in the MT-TL1 gene causing the MELAS syndrome by tRNA import into mitochondria

Karicheva, O. Z., Kolesnikova, O. A., Schirtz, T., Vysokikh, M. Y., Mager-Heckel, A.-M., Lombes, A., Boucheham, A., Krasheninnikov, I. A., Martin, R. P., Entelis, N., Tarassov, I.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 4.97 MB

english, 2011

4

Flexible tethering of primase and DNA Pol in the eukaryotic primosome

Nunez-Ramirez, R., Klinge, S., Sauguet, L., Melero, R., Recuero-Checa, M. A., Kilkenny, M., Perera, R. L., Garcia-Alvarez, B., Hall, R. J., Nogales, E., Pellegrini, L., Llorca, O.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 5.46 MB

english, 2011

5

Whole-transcriptome RNAseq analysis from minute amount of total RNA

Tariq, M. A., Kim, H. J., Jejelowo, O., Pourmand, N.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 3.50 MB

english, 2011

6

Towards resolving the transcription factor network controlling myelin gene expression

Fulton, D. L., Denarier, E., Friedman, H. C., Wasserman, W. W., Peterson, A. C.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 6.13 MB

english, 2011

7

The prebiotic evolutionary advantage of transferring genetic information from RNA to DNA

Leu, K., Obermayer, B., Rajamani, S., Gerland, U., Chen, I. A.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 4.66 MB

english, 2011

8

Specific DNA structural attributes modulate platinum anticancer drug site selection and cross-link generation

Wu, B., Davey, G. E., Nazarov, A. A., Dyson, P. J., Davey, C. A.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 14.13 MB

english, 2011

9

DNA cleavage site selection by Type III restriction enzymes provides evidence for head-on protein collisions following 1D bidirectional motion

Schwarz, F. W., van Aelst, K., Toth, J., Seidel, R., Szczelkun, M. D.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 754 KB

english, 2011

10

Molecular design of a splicing switch responsive to the RNA binding protein Tra2

Grellscheid, S. N., Dalgliesh, C., Rozanska, A., Grellscheid, D., Bourgeois, C. F., Stevenin, J., Elliott, D. J.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 6.62 MB

english, 2011

11

Internal standard-based analysis of microarray data2--Analysis of functional associations between HVE-genes

Dozmorov, I. M., Jarvis, J., Saban, R., Benbrook, D. M., Wakeland, E., Aksentijevich, I., Ryan, J., Chiorazzi, N., Guthridge, J. M., Drewe, E., Tighe, P. J., Centola, M., Lefkovits, I.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 12.66 MB

english, 2011

12

Structural basis for the cooperative DNA recognition by Smad4 MH1 dimers

Baburajendran, N., Jauch, R., Tan, C. Y. Z., Narasimhan, K., Kolatkar, P. R.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 3.30 MB

english, 2011

13

STEME: efficient EM to find motifs in large data sets

Reid, J. E., Wernisch, L.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 412 KB

english, 2011

14

XRCC1 haploinsufficiency in mice has little effect on aging, but adversely modifies exposure-dependent susceptibility

McNeill, D. R., Lin, P.-C., Miller, M. G., Pistell, P. J., de Souza-Pinto, N. C., Fishbein, K. W., Spencer, R. G., Liu, Y., Pettan-Brewer, C., Ladiges, W. C., Wilson, D. M.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 4.96 MB

english, 2011

15

Experimental mapping of soluble protein domains using a hierarchical approach

Pedelacq, J.-D., Nguyen, H. B., Cabantous, S., Mark, B. L., Listwan, P., Bell, C., Friedland, N., Lockard, M., Faille, A., Mourey, L., Terwilliger, T. C., Waldo, G. S.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 12.43 MB

english, 2011

16

PhenomeNET: a whole-phenome approach to disease gene discovery

Hoehndorf, R., Schofield, P. N., Gkoutos, G. V.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 1.71 MB

english, 2011

17

Broad-spectrum aptamer inhibitors of HIV reverse transcriptase closely mimic natural substrates

Ditzler, M. A., Bose, D., Shkriabai, N., Marchand, B., Sarafianos, S. G., Kvaratskhelia, M., Burke, D. H.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 6.24 MB

english, 2011

18

Precise BAC targeting of genetically polymorphic mouse ES cells

Barakat, T. S., Rentmeester, E., Sleutels, F., Grootegoed, J. A., Gribnau, J.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 3.82 MB

english, 2011

19

ASF1A and ATM regulate H3K56-mediated cell-cycle checkpoint recovery in response to UV irradiation

Battu, A., Ray, A., Wani, A. A.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 10.13 MB

english, 2011

20

Dynamic usage of alternative splicing exons during mouse retina development

Wan, J., Masuda, T., Hackler, L., Torres, K. M., Merbs, S. L., Zack, D. J., Qian, J.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 5.54 MB

english, 2011

21

A genome wide study in fission yeast reveals nine PPR proteins that regulate mitochondrial gene expression

Kuhl, I., Dujeancourt, L., Gaisne, M., Herbert, C. J., Bonnefoy, N.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 3.21 MB

english, 2011

22

Zinc-finger transcription factors are associated with guanine quadruplex motifs in human, chimpanzee, mouse and rat promoters genome-wide

Kumar, P., Yadav, V. K., Baral, A., Kumar, P., Saha, D., Chowdhury, S.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 7.06 MB

english, 2011

23

Subscriptions

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 49 KB

english, 2011

24

Structural determinants of TAR RNA-DNA annealing in the absence and presence of HIV-1 nucleocapsid protein

Kanevsky, I., Chaminade, F., Chen, Y., Godet, J., Rene, B., Darlix, J.-L., Mely, Y., Mauffret, O., Fosse, P.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 3.15 MB

english, 2011

25

A global insight into a cancer transcriptional space using pancreatic data: importance, findings and flaws

Gadaleta, E., Cutts, R. J., Kelly, G. P., Crnogorac-Jurcevic, T., Kocher, H. M., Lemoine, N. R., Chelala, C.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 169 KB

english, 2011

26

MicroRNA-296 is enriched in cancer cells and downregulates p21WAF1 mRNA expression via interaction with its 3' untranslated region

Yoon, A.-r., Gao, R., Kaul, Z., Choi, I.-K., Ryu, J., Noble, J. R., Kato, Y., Saito, S., Hirano, T., Ishii, T., Reddel, R. R., Yun, C.-O., Kaul, S. C., Wadhwa, R.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 8.05 MB

english, 2011

27

Temperature-induced melting of double-stranded DNA in the absence and presence of covalently bonded antitumour drugs: insight from molecular dynamics simulations

Bueren-Calabuig, J. A., Giraudon, C., Galmarini, C. M., Egly, J. M., Gago, F.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 7.15 MB

english, 2011

28

Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI

Shen, B. W., Xu, D., Chan, S.-H., Zheng, Y., Zhu, Z., Xu, S.-y., Stoddard, B. L.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 14.47 MB

english, 2011

29

Fluorescence protection assay: a novel homogeneous assay platform toward development of aptamer sensors for protein detection

Wang, H.-Q., Wu, Z., Tang, L.-J., Yu, R.-Q., Jiang, J.-H.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 1.56 MB

english, 2011

30

CKI isoforms and regulate Star-PAP target messages by controlling Star-PAP poly(A) polymerase activity and phosphoinositide stimulation

Laishram, R. S., Barlow, C. A., Anderson, R. A.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 8.37 MB

english, 2011

31

Next-generation insights into regulatory T cells: expression profiling and FoxP3 occupancy in Human

Birzele, F., Fauti, T., Stahl, H., Lenter, M. C., Simon, E., Knebel, D., Weith, A., Hildebrandt, T., Mennerich, D.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 12.25 MB

english, 2011

32

A multifactor regulatory circuit involving H-NS, VirF and an antisense RNA modulates transcription of the virulence gene icsA of Shigella flexneri

Tran, C. N., Giangrossi, M., Prosseda, G., Brandi, A., Di Martino, M. L., Colonna, B., Falconi, M.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 10.97 MB

english, 2011

33

Specific sequence determinants of miR-15/107 microRNA gene group targets

Nelson, P. T., Wang, W.-X., Mao, G., Wilfred, B. R., Xie, K., Jennings, M. H., Gao, Z., Wang, X.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 2.10 MB

english, 2011

34

Ubiquitination of human AP-endonuclease 1 (APE1) enhanced by T233E substitution and by CDK5

Busso, C. S., Wedgeworth, C. M., Izumi, T.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 10.05 MB

english, 2011

35

Nucleic Acids Research - Editorial Board

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 58 KB

english, 2011

36

Nucleic Acids Research: VOLUME 39 ISSUE 18 2011

Journal:

Nucleic Acids Research

Year:

2011

File:

PDF, 34.80 MB

2011

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