Volume 40; Issue 5

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Nucleic Acids Research
Volume 40; Issue 5

Nucleic Acids Research

Volume 40; Issue 5

1

Direct, genome-wide assessment of DNA mutations in single cells

Gundry, M., Li, W., Maqbool, S. B., Vijg, J.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 1.65 MB

english, 2012

2

Novel non-specific DNA adenine methyltransferases

Drozdz, M., Piekarowicz, A., Bujnicki, J. M., Radlinska, M.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 4.69 MB

english, 2012

3

Native gel electrophoresis of human telomerase distinguishes active complexes with or without dyskerin

Gardano, L., Holland, L., Oulton, R., Le Bihan, T., Harrington, L.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 2.24 MB

english, 2012

4

Chemical structure requirements and cellular targeting of microRNA-122 by peptide nucleic acids anti-miRs

Torres, A. G., Fabani, M. M., Vigorito, E., Williams, D., Al-Obaidi, N., Wojciechowski, F., Hudson, R. H. E., Seitz, O., Gait, M. J.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 7.18 MB

english, 2012

5

A supramolecular assembly formed by influenza A virus genomic RNA segments

Fournier, E., Moules, V., Essere, B., Paillart, J.-C., Sirbat, J.-D., Isel, C., Cavalier, A., Rolland, J.-P., Thomas, D., Lina, B., Marquet, R.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 8.97 MB

english, 2012

6

Structural analysis of an eIF3 subcomplex reveals conserved interactions required for a stable and proper translation pre-initiation complex assembly

Herrmannova, A., Daujotyte, D., Yang, J.-C., Cuchalova, L., Gorrec, F., Wagner, S., Danyi, I., Lukavsky, P. J., Shivaya Valasek, L.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 16.20 MB

english, 2012

7

West Nile virus encodes a microRNA-like small RNA in the 3' untranslated region which up-regulates GATA4 mRNA and facilitates virus replication in mosquito cells

Hussain, M., Torres, S., Schnettler, E., Funk, A., Grundhoff, A., Pijlman, G. P., Khromykh, A. A., Asgari, S.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 1.38 MB

english, 2012

8

Self-assembled nucleolipids: from supramolecular structure to soft nucleic acid and drug delivery devices

Allain, V., Bourgaux, C., Couvreur, P.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 8.80 MB

english, 2012

9

Fosmid-based whole genome haplotyping of a HapMap trio child: evaluation of Single Individual Haplotyping techniques

Duitama, J., McEwen, G. K., Huebsch, T., Palczewski, S., Schulz, S., Verstrepen, K., Suk, E.-K., Hoehe, M. R.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 5.89 MB

english, 2012

10

Pre-B cell to macrophage transdifferentiation without significant promoter DNA methylation changes

Rodriguez-Ubreva, J., Ciudad, L., Gomez-Cabrero, D., Parra, M., Bussmann, L. H., di Tullio, A., Kallin, E. M., Tegner, J., Graf, T., Ballestar, E.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 9.72 MB

english, 2012

11

Characterization of the kinetic and thermodynamic landscape of RNA folding using a novel application of isothermal titration calorimetry

Vander Meulen, K. A., Butcher, S. E.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 5.04 MB

english, 2012

12

Nucleic Acids Research: VOLUME 40 ISSUE 5 2012

Journal:

Nucleic Acids Research

Year:

2012

File:

PDF, 584 KB

2012

13

LSD1 cooperates with CTIP2 to promote HIV-1 transcriptional silencing

Le Douce, V., Colin, L., Redel, L., Cherrier, T., Herbein, G., Aunis, D., Rohr, O., Van Lint, C., Schwartz, C.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 6.39 MB

english, 2012

14

Synthetic transactivation screening reveals ETV4 as broad coactivator of hypoxia-inducible factor signaling

Wollenick, K., Hu, J., Kristiansen, G., Schraml, P., Rehrauer, H., Berchner-Pfannschmidt, U., Fandrey, J., Wenger, R. H., Stiehl, D. P.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 10.98 MB

english, 2012

15

Solution structure and DNA-binding properties of the phosphoesterase domain of DNA ligase D

Natarajan, A., Dutta, K., Temel, D. B., Nair, P. A., Shuman, S., Ghose, R.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 10.69 MB

english, 2012

16

Pseudouridine synthase 1: a site-specific synthase without strict sequence recognition requirements

Sibert, B. S., Patton, J. R.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 1.15 MB

english, 2012

17

The food additive vanillic acid controls transgene expression in mammalian cells and mice

Gitzinger, M., Kemmer, C., Fluri, D. A., Daoud El-Baba, M., Weber, W., Fussenegger, M.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 377 KB

english, 2012

18

Development of a 'clickable' non-natural nucleotide to visualize the replication of non-instructional DNA lesions

Motea, E. A., Lee, I., Berdis, A. J.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 3.85 MB

english, 2012

19

Do replication forks control late origin firing in Saccharomyces cerevisiae?

Ma, E., Hyrien, O., Goldar, A.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 3.35 MB

english, 2012

20

Crucial elements that maintain the interactions between the regulatory TnaC peptide and the ribosome exit tunnel responsible for Trp inhibition of ribosome function

Martinez, A. K., Shirole, N. H., Murakami, S., Benedik, M. J., Sachs, M. S., Cruz-Vera, L. R.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 5.43 MB

english, 2012

21

Enhancing the cellular uptake of Py-Im polyamides through next-generation aryl turns

Meier, J. L., Montgomery, D. C., Dervan, P. B.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 2.03 MB

english, 2012

22

Carrier-free cellular uptake and the gene-silencing activity of the lipophilic siRNAs is strongly affected by the length of the linker between siRNA and lipophilic group

Petrova, N. S., Chernikov, I. V., Meschaninova, M. I., Dovydenko, I. S., Venyaminova, A. G., Zenkova, M. A., Vlassov, V. V., Chernolovskaya, E. L.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 8.05 MB

english, 2012

23

Maximizing signal-to-noise ratio in the random mutation capture assay

Poovathingal, S. K., Gruber, J., Ng, L. F., Halliwell, B., Gunawan, R.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 326 KB

english, 2012

24

Subscriptions

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 50 KB

english, 2012

25

Cleavage mediated by the P15 domain of bacterial RNase P RNA

Kikovska, E., Wu, S., Mao, G., Kirsebom, L. A.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 4.92 MB

english, 2012

26

Unsupervised discovery of microbial population structure within metagenomes using nucleotide base composition

Saeed, I., Tang, S.-L., Halgamuge, S. K.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 353 KB

english, 2012

27

Nucleic Acids Research - Editorial Board

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 58 KB

english, 2012

28

Helix-length compensation studies reveal the adaptability of the VS ribozyme architecture

Lacroix-Labonte, J., Girard, N., Lemieux, S., Legault, P.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 1.80 MB

english, 2012

29

Pso2 (SNM1) is a DNA structure-specific endonuclease

Tiefenbach, T., Junop, M.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 3.46 MB

english, 2012

30

Permanent or reversible conjugation of 2'-O- or 5'-O-aminooxymethylated nucleosides with functional groups as a convenient and efficient approach to the modification of RNA and DNA sequences

Cieslak, J., Grajkowski, A., Ausin, C., Gapeev, A., Beaucage, S. L.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 1.23 MB

english, 2012

31

RNA aptamers that functionally interact with green fluorescent protein and its derivatives

Shui, B., Ozer, A., Zipfel, W., Sahu, N., Singh, A., Lis, J. T., Shi, H., Kotlikoff, M. I.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 6.59 MB

english, 2012

32

Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions

Schmidtke, C., Findeiss, S., Sharma, C. M., Kuhfuss, J., Hoffmann, S., Vogel, J., Stadler, P. F., Bonas, U.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 3.10 MB

english, 2012

33

A role for insulator elements in the regulation of gene expression response to hypoxia

Tiana, M., Villar, D., Perez-Guijarro, E., Gomez-Maldonado, L., Molto, E., Fernandez-Minan, A., Gomez-Skarmeta, J. L., Montoliu, L., del Peso, L.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 2.28 MB

english, 2012

34

The 19S proteasome subcomplex promotes the targeting of NuA4 HAT to the promoters of ribosomal protein genes to facilitate the recruitment of TFIID for transcriptional initiation in vivo

Uprety, B., Lahudkar, S., Malik, S., Bhaumik, S. R.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 3.88 MB

english, 2012

35

Attenuation of loop-receptor interactions with pseudoknot formation

Afonin, K. A., Lin, Y.-P., Calkins, E. R., Jaeger, L.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 3.30 MB

english, 2012

36

Nonspaced inverted DNA repeats are preferential targets for homology-directed gene repair in mammalian cells

Holkers, M., de Vries, A. A. F., Goncalves, M. A. F. V.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 6.70 MB

english, 2012

37

Specialization of an Exonuclease III family enzyme in the repair of 3' DNA lesions during base excision repair in the human pathogen Neisseria meningitidis

Silhan, J., Nagorska, K., Zhao, Q., Jensen, K., Freemont, P. S., Tang, C. M., Baldwin, G. S.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 5.86 MB

english, 2012

38

Single-pot enzymatic synthesis of Dicer-substrate siRNAs

Guiley, K. Z., Pratt, A. J., MacRae, I. J.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 583 KB

english, 2012

39

Crystal structure of the NurA-dAMP-Mn2+ complex

Chae, J., Kim, Y. C., Cho, Y.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 12.35 MB

english, 2012

40

A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding

Whelan, F., Stead, J. A., Shkumatov, A. V., Svergun, D. I., Sanders, C. M., Antson, A. A.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 8.42 MB

english, 2012

41

Biochemical studies of the Saccharomyces cerevisiae Mph1 helicase on junction-containing DNA structures

Kang, Y.-H., Munashingha, P. R., Lee, C.-H., Nguyen, T. A., Seo, Y.-S.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 2.33 MB

english, 2012

42

Identification of co-occurring transcription factor binding sites from DNA sequence using clustered position weight matrices

Oh, Y. M., Kim, J. K., Choi, S., Yoo, J.-Y.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 4.94 MB

english, 2012