Volume 42; Issue D1

Nucleic Acids Research

Volume 42; Issue D1
7

FlyBase 102--advanced approaches to interrogating FlyBase

St. Pierre, S. E., Ponting, L., Stefancsik, R., McQuilton, P.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 15.54 MB
english, 2014
12

rSNPBase: a database for curated regulatory SNPs

Guo, L., Du, Y., Chang, S., Zhang, K., Wang, J.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 4.85 MB
english, 2014
19

The European Bioinformatics Institute's data resources 2014

Brooksbank, C., Bergman, M. T., Apweiler, R., Birney, E., Thornton, J.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 332 KB
english, 2014
25

The carbohydrate-active enzymes database (CAZy) in 2013

Lombard, V., Golaconda Ramulu, H., Drula, E., Coutinho, P. M., Henrissat, B.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 3.61 MB
english, 2014
32

CPLM: a database of protein lysine modifications

Liu, Z., Wang, Y., Gao, T., Pan, Z., Cheng, H., Yang, Q., Cheng, Z., Guo, A., Ren, J., Xue, Y.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 7.62 MB
english, 2014
36

SAbDab: the structural antibody database

Dunbar, J., Krawczyk, K., Leem, J., Baker, T., Fuchs, A., Georges, G., Shi, J., Deane, C. M.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 4.67 MB
english, 2014
39

Activities at the Universal Protein Resource (UniProt)

Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 2.74 MB
english, 2014
43

miRBase: annotating high confidence microRNAs using deep sequencing data

Kozomara, A., Griffiths-Jones, S.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 7.48 MB
english, 2014
45

GenBank

Benson, D. A., Clark, K., Karsch-Mizrachi, I., Lipman, D. J., Ostell, J., Sayers, E. W.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 128 KB
english, 2014
53

miRNEST 2.0: a database of plant and animal microRNAs

Szczesniak, M. W., Makalowska, I.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 981 KB
english, 2014
54

LPSN--list of prokaryotic names with standing in nomenclature

Parte, A. C.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 1.23 MB
english, 2014
59

SCOP2 prototype: a new approach to protein structure mining

Andreeva, A., Howorth, D., Chothia, C., Kulesha, E., Murzin, A. G.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 2.36 MB
english, 2014
66

mVOC: a database of microbial volatiles

Lemfack, M. C., Nickel, J., Dunkel, M., Preissner, R., Piechulla, B.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 2.94 MB
english, 2014
70

LSD 2.0: an update of the leaf senescence database

Li, Z., Zhao, Y., Liu, X., Peng, J., Guo, H., Luo, J.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 8.76 MB
english, 2014
80

RADAR: a rigorously annotated database of A-to-I RNA editing

Ramaswami, G., Li, J. B.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 4.35 MB
english, 2014
81

P3DB 3.0: From plant phosphorylation sites to protein networks

Yao, Q., Ge, H., Wu, S., Zhang, N., Chen, W., Xu, C., Gao, J., Thelen, J. J., Xu, D.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 10.09 MB
english, 2014
83

TISdb: a database for alternative translation initiation in mammalian cells

Wan, J., Qian, S.-B.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 2.90 MB
english, 2014
84

MitoBreak: the mitochondrial DNA breakpoints database

Damas, J., Carneiro, J., Amorim, A., Pereira, F.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 7.22 MB
english, 2014
85

GEISHA: an evolving gene expression resource for the chicken embryo

Antin, P. B., Yatskievych, T. A., Davey, S., Darnell, D. K.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 5.24 MB
english, 2014
87

NONCODEv4: exploring the world of long non-coding RNA genes

Xie, C., Yuan, J., Li, H., Li, M., Zhao, G., Bu, D., Zhu, W., Wu, W., Chen, R., Zhao, Y.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 1.19 MB
english, 2014
94

SuperPain--a resource on pain-relieving compounds targeting ion channels

Gohlke, B. O., Preissner, R., Preissner, S.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 3.70 MB
english, 2014
104

NeXO Web: the NeXO ontology database and visualization platform

Dutkowski, J., Ono, K., Kramer, M., Yu, M., Pratt, D., Demchak, B., Ideker, T.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 6.13 MB
english, 2014
107

NECTAR: a database of codon-centric missense variant annotations

Gong, S., Ware, J. S., Walsh, R., Cook, S. A.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 3.33 MB
english, 2014
110

Nucleic Acids Research - Editorial Board

Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 59 KB
english, 2014
111

FunCoup 3.0: database of genome-wide functional coupling networks

Schmitt, T., Ogris, C., Sonnhammer, E. L. L.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 3.82 MB
english, 2014
112

Nucleic Acids Research: Volume 42 Database Issue January 1, 2014

Journal:
Nucleic Acids Research
Year:
2014
File:
PDF, 272 KB
2014
114

The Transporter Classification Database

Saier, M. H., Reddy, V. S., Tamang, D. G., Vastermark, A.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 3.17 MB
english, 2014
120

PubChem BioAssay: 2014 update

Wang, Y., Suzek, T., Zhang, J., Wang, J., He, S., Cheng, T., Shoemaker, B. A., Gindulyte, A., Bryant, S. H.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 6.54 MB
english, 2014
123

HRaP: database of occurrence of HomoRepeats and patterns in proteomes

Lobanov, M. Y., Sokolovskiy, I. V., Galzitskaya, O. V.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 14.75 MB
english, 2014
134

LenVarDB: database of length-variant protein domains

Mutt, E., Mathew, O. K., Sowdhamini, R.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 4.21 MB
english, 2014
135

RNA Bricks--a database of RNA 3D motifs and their interactions

Chojnowski, G., Walen, T., Bujnicki, J. M.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 3.31 MB
english, 2014
136

Subscriptions

Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 49 KB
english, 2014
138

PDBsum additions

de Beer, T. A. P., Berka, K., Thornton, J. M., Laskowski, R. A.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 4.91 MB
english, 2014
141

GPCRDB: an information system for G protein-coupled receptors

Isberg, V., Vroling, B., van der Kant, R., Li, K., Vriend, G., Gloriam, D.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 2.72 MB
english, 2014
145

TreeFam v9: a new website, more species and orthology-on-the-fly

Schreiber, F., Patricio, M., Muffato, M., Pignatelli, M., Bateman, A.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 1.22 MB
english, 2014
149

NPInter v2.0: an updated database of ncRNA interactions

Yuan, J., Wu, W., Xie, C., Zhao, G., Zhao, Y., Chen, R.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 1.45 MB
english, 2014
155

P-MITE: a database for plant miniature inverted-repeat transposable elements

Chen, J., Hu, Q., Zhang, Y., Lu, C., Kuang, H.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 334 KB
english, 2014
156

Manually curated database of rice proteins

Gour, P., Garg, P., Jain, R., Joseph, S. V., Tyagi, A. K., Raghuvanshi, S.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 11.70 MB
english, 2014
159

BacDive--the Bacterial Diversity Metadatabase

Sohngen, C., Bunk, B., Podstawka, A., Gleim, D., Overmann, J.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 6.31 MB
english, 2014
160

Progenetix: 12 years of oncogenomic data curation

Cai, H., Kumar, N., Ai, N., Gupta, S., Rath, P., Baudis, M.
Journal:
Nucleic Acids Research
Year:
2014
Language:
english
File:
PDF, 3.78 MB
english, 2014