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Volume 43; Issue 8
Main
Nucleic Acids Research
Volume 43; Issue 8
Nucleic Acids Research
Volume 43; Issue 8
1
Highly efficient CRISPR/Cas9-mediated TAR cloning of genes and chromosomal loci from complex genomes in yeast
Lee, N. C. O.
,
Larionov, V.
,
Kouprina, N.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 1.56 MB
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english, 2015
2
Inferential modeling of 3D chromatin structure
Wang, S.
,
Xu, J.
,
Zeng, J.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.57 MB
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english, 2015
3
The interaction of mycobacterial protein Rv2966c with host chromatin is mediated through non-CpG methylation and histone H3/H4 binding
Sharma, G.
,
Upadhyay, S.
,
Srilalitha, M.
,
Nandicoori, V. K.
,
Khosla, S.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 12.99 MB
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english, 2015
4
Modeling the relationship of epigenetic modifications to transcription factor binding
Liu, L.
,
Jin, G.
,
Zhou, X.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 4.40 MB
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english, 2015
5
Gene-specific cell labeling using MiMIC transposons
Gnerer, J. P.
,
Venken, K. J. T.
,
Dierick, H. A.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 7.19 MB
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english, 2015
6
The structural impact of DNA mismatches
Rossetti, G.
,
Dans, P. D.
,
Gomez-Pinto, I.
,
Ivani, I.
,
Gonzalez, C.
,
Orozco, M.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 5.95 MB
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english, 2015
7
Specificity of the ModA11, ModA12 and ModD1 epigenetic regulator N6-adenine DNA methyltransferases of Neisseria meningitidis
Seib, K. L.
,
Jen, F. E.- C.
,
Tan, A.
,
Scott, A. L.
,
Kumar, R.
,
Power, P. M.
,
Chen, L.-T.
,
Wu, H.-J.
,
Wang, A. H.- J.
,
Hill, D. M. C.
,
Luyten, Y. A.
,
Morgan, R. D.
,
Roberts, R. J.
,
Maiden, M. C. J.
,
Bo
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 4.21 MB
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english, 2015
8
Heme activation by DNA: isoguanine pentaplexes, but not quadruplexes, bind heme and enhance its oxidative activity
Shumayrikh, N.
,
Huang, Y. C.
,
Sen, D.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.30 MB
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english, 2015
9
The hexameric structure of the human mitochondrial replicative helicase Twinkle
Fernandez-Millan, P.
,
Lazaro, M.
,
Cans z-Arda, irin
,
Gerhold, J. M.
,
Rajala, N.
,
Schmitz, C.-A.
,
Silva-Espina, C.
,
Gil, D.
,
Bernado, P.
,
Valle, M.
,
Spelbrink, J. N.
,
Sola, M.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 3.79 MB
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english, 2015
10
CAGEr: precise TSS data retrieval and high-resolution promoterome mining for integrative analyses
Haberle, V.
,
Forrest, A. R. R.
,
Hayashizaki, Y.
,
Carninci, P.
,
Lenhard, B.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 722 KB
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english, 2015
11
RNA polymerase II pausing can be retained or acquired during activation of genes involved in the epithelial to mesenchymal transition
Samarakkody, A.
,
Abbas, A.
,
Scheidegger, A.
,
Warns, J.
,
Nnoli, O.
,
Jokinen, B.
,
Zarns, K.
,
Kubat, B.
,
Dhasarathy, A.
,
Nechaev, S.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 7.64 MB
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english, 2015
12
A functional screen identifies miRNAs that inhibit DNA repair and sensitize prostate cancer cells to ionizing radiation
Hatano, K.
,
Kumar, B.
,
Zhang, Y.
,
Coulter, J. B.
,
Hedayati, M.
,
Mears, B.
,
Ni, X.
,
Kudrolli, T. A.
,
Chowdhury, W. H.
,
Rodriguez, R.
,
DeWeese, T. L.
,
Lupold, S. E.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 1.81 MB
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english, 2015
13
RNA editing by T7 RNA polymerase bypasses InDel mutations causing unexpected phenotypic changes
Wons, E.
,
Furmanek-Blaszk, B.
,
Sektas, M.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 3.64 MB
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english, 2015
14
A universal strategy for regulating mRNA translation in prokaryotic and eukaryotic cells
Cao, J.
,
Arha, M.
,
Sudrik, C.
,
Mukherjee, A.
,
Wu, X.
,
Kane, R. S.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.34 MB
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english, 2015
15
Selective inhibition of miR-21 by phage display screened peptide
Bose, D.
,
Nahar, S.
,
Rai, M. K.
,
Ray, A.
,
Chakraborty, K.
,
Maiti, S.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.68 MB
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english, 2015
16
Following the footprints of polymorphic inversions on SNP data: from detection to association tests
Caceres, A.
,
Gonzalez, J. R.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 3.52 MB
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english, 2015
17
The nucleoporin Mlp2 is involved in chromosomal distribution during mitosis in trypanosomatids
Morelle, C.
,
Sterkers, Y.
,
Crobu, L.
,
MBang-Benet, D.-E.
,
Kuk, N.
,
Portales, P.
,
Bastien, P.
,
Pages, M.
,
Lachaud, L.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 16.35 MB
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english, 2015
18
Gadd45a promotes DNA demethylation through TDG
Li, Z.
,
Gu, T.-P.
,
Weber, A. R.
,
Shen, J.-Z.
,
Li, B.-Z.
,
Xie, Z.-G.
,
Yin, R.
,
Guo, F.
,
Liu, X.
,
Tang, F.
,
Wang, H.
,
Schar, P.
,
Xu, G.-L.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 4.58 MB
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english, 2015
19
Distribution of DNA-condensing protein complexes in the adenovirus core
Perez-Berna, A. J.
,
Marion, S.
,
Chichon, F. J.
,
Fernandez, J. J.
,
Winkler, D. C.
,
Carrascosa, J. L.
,
Steven, A. C.
,
iber, A.
,
San Martin, C.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.62 MB
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english, 2015
20
Nucleosomes undergo slow spontaneous gaping
Ngo, T. T. M.
,
Ha, T.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 1.63 MB
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english, 2015
21
Epigenetic regulation of intragenic transposable elements impacts gene transcription in Arabidopsis thaliana
Le, T. N.
,
Miyazaki, Y.
,
Takuno, S.
,
Saze, H.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.25 MB
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english, 2015
22
Reconstructing genome-scale metabolic models with merlin
Dias, O.
,
Rocha, M.
,
Ferreira, E. C.
,
Rocha, I.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.61 MB
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english, 2015
23
Significance of ligand interactions involving Hop2-Mnd1 and the RAD51 and DMC1 recombinases in homologous DNA repair and XX ovarian dysgenesis
Zhao, W.
,
Sung, P.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.14 MB
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english, 2015
24
Effects of Hfq on the conformation and compaction of DNA
Jiang, K.
,
Zhang, C.
,
Guttula, D.
,
Liu, F.
,
van Kan, J. A.
,
Lavelle, C.
,
Kubiak, K.
,
Malabirade, A.
,
Lapp, A.
,
Arluison, V.
,
van der Maarel, J. R. C.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 1.38 MB
Your tags:
english, 2015
25
Disruption of PARP1 function inhibits base excision repair of a sub-set of DNA lesions
Reynolds, P.
,
Cooper, S.
,
Lomax, M.
,
O'Neill, P.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.08 MB
Your tags:
english, 2015
26
Ad 2.0: a novel recombineering platform for high-throughput generation of tailored adenoviruses
Muck-Hausl, M.
,
Solanki, M.
,
Zhang, W.
,
Ruzsics, Z.
,
Ehrhardt, A.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.05 MB
Your tags:
english, 2015
27
A rapid and sensitive high-throughput screening method to identify compounds targeting protein-nucleic acids interactions
Alonso, N.
,
Guillen, R.
,
Chambers, J. W.
,
Leng, F.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 1.00 MB
Your tags:
english, 2015
28
Integrating motif, DNA accessibility and gene expression data to build regulatory maps in an organism
Blatti, C.
,
Kazemian, M.
,
Wolfe, S.
,
Brodsky, M.
,
Sinha, S.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 3.15 MB
Your tags:
english, 2015
29
Splicing factor SRSF1 negatively regulates alternative splicing of MDM2 under damage
Comiskey, D. F.
,
Jacob, A. G.
,
Singh, R. K.
,
Tapia-Santos, A. S.
,
Chandler, D. S.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 3.49 MB
Your tags:
english, 2015
30
Heat-induced ribosome pausing triggers mRNA co-translational decay in Arabidopsis thaliana
Merret, R.
,
Nagarajan, V. K.
,
Carpentier, M.-C.
,
Park, S.
,
Favory, J.-J.
,
Descombin, J.
,
Picart, C.
,
Charng, Y.-y.
,
Green, P. J.
,
Deragon, J.-M.
,
Bousquet-Antonelli, C.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 7.15 MB
Your tags:
english, 2015
31
The feedback control of UPF3 is crucial for RNA surveillance in plants
Degtiar, E.
,
Fridman, A.
,
Gottlieb, D.
,
Vexler, K.
,
Berezin, I.
,
Farhi, R.
,
Golani, L.
,
Shaul, O.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 7.01 MB
Your tags:
english, 2015
32
Subunit compositions of Arabidopsis RNA polymerases I and III reveal Pol I- and Pol III-specific forms of the AC40 subunit and alternative forms of the C53 subunit
Ream, T. S.
,
Haag, J. R.
,
Pontvianne, F.
,
Nicora, C. D.
,
Norbeck, A. D.
,
Pa a-Toli , L.
,
Pikaard, C. S.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 8.07 MB
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english, 2015
33
The NEIL glycosylases remove oxidized guanine lesions from telomeric and promoter quadruplex DNA structures
Zhou, J.
,
Fleming, A. M.
,
Averill, A. M.
,
Burrows, C. J.
,
Wallace, S. S.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 4.87 MB
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english, 2015
34
SubmiRine: assessing variants in microRNA targets using clinical genomic data sets
Maxwell, E. K.
,
Campbell, J. D.
,
Spira, A.
,
Baxevanis, A. D.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.54 MB
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english, 2015
35
Regulation of yeast DNA polymerase -mediated strand displacement synthesis by 5'-flaps
Koc, K. N.
,
Stodola, J. L.
,
Burgers, P. M.
,
Galletto, R.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 3.95 MB
Your tags:
english, 2015
36
Heterogeneous dynamics in DNA site discrimination by the structurally homologous DNA-binding domains of ETS-family transcription factors
He, G.
,
Tolic, A.
,
Bashkin, J. K.
,
Poon, G. M. K.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 1.52 MB
Your tags:
english, 2015
37
Differences in genome-wide repeat sequence instability conferred by proofreading and mismatch repair defects
Lujan, S. A.
,
Clark, A. B.
,
Kunkel, T. A.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 874 KB
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english, 2015
38
Nuclear pore components affect distinct stages of intron-containing gene expression
Bonnet, A.
,
Bretes, H.
,
Palancade, B.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 3.77 MB
Your tags:
english, 2015
39
Uncoupling histone turnover from transcription-associated histone H3 modifications
Ferrari, P.
,
Strubin, M.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 745 KB
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english, 2015
40
A common tRNA modification at an unusual location: the discovery of wyosine biosynthesis in mitochondria
Sample, P. J.
,
Ko eny, L.
,
Paris, Z.
,
Gaston, K. W.
,
Rubio, M. A. T.
,
Fleming, I. M. C.
,
Hinger, S.
,
Horakova, E.
,
Limbach, P. A.
,
Luke , J.
,
Alfonzo, J. D.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 4.30 MB
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english, 2015
41
An update on LNCipedia: a database for annotated human lncRNA sequences
Volders, P. J.
,
Verheggen, K.
,
Menschaert, G.
,
Vandepoele, K.
,
Martens, L.
,
Vandesompele, J.
,
Mestdagh, P.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 580 KB
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english, 2015
42
Molecular crowding enhances facilitated diffusion of two human DNA glycosylases
Cravens, S. L.
,
Schonhoft, J. D.
,
Rowland, M. M.
,
Rodriguez, A. A.
,
Anderson, B. G.
,
Stivers, J. T.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.16 MB
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english, 2015
43
Nucleic Acids Research: Editorial Board
Journal:
Nucleic Acids Research
Year:
2015
File:
PDF, 1.61 MB
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2015
44
Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression
Horton, J. R.
,
Zhang, X.
,
Blumenthal, R. M.
,
Cheng, X.
Journal:
Nucleic Acids Research
Year:
2015
File:
PDF, 8.19 MB
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2015
45
Are mutagenic non D-loop direct repeat motifs in mitochondrial DNA under a negative selection pressure?
Lakshmanan, L. N.
,
Gruber, J.
,
Halliwell, B.
,
Gunawan, R.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 1.15 MB
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english, 2015
46
Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression
Horton, J. R.
,
Zhang, X.
,
Blumenthal, R. M.
,
Cheng, X.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 8.19 MB
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english, 2015
47
Subscriptions
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 62 KB
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english, 2015
48
Active displacement of RecA filaments by UvrD translocase activity
Petrova, V.
,
Chen, S. H.
,
Molzberger, E. T.
,
Tomko, E.
,
Chitteni-Pattu, S.
,
Jia, H.
,
Ordabayev, Y.
,
Lohman, T. M.
,
Cox, M. M.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 12.66 MB
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english, 2015
49
RBM7 subunit of the NEXT complex binds U-rich sequences and targets 3'-end extended forms of snRNAs
Hrossova, D.
,
Sikorsky, T.
,
Potesil, D.
,
Bartosovic, M.
,
Pasulka, J.
,
Zdrahal, Z.
,
Stefl, R.
,
Vanacova, S.
Journal:
Nucleic Acids Research
Year:
2015
Language:
english
File:
PDF, 2.57 MB
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english, 2015
50
Nucleic Acids Research: VOLUME 43 ISSUE 8 2015
Journal:
Nucleic Acids Research
Year:
2015
File:
PDF, 3.63 MB
Your tags:
2015
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