Volume 45; Issue 20

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Nucleic Acids Research
Volume 45; Issue 20

Nucleic Acids Research

Volume 45; Issue 20

1

Enzyme cycling contributes to efficient induction of genome mutagenesis by the cytidine deaminase APOBEC3B

Adolph, Madison B., Love, Robin P., Feng, Yuqing, Chelico, Linda

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 3.60 MB

english, 2017

2

FANCI and FANCD2 have common as well as independent functions during the cellular replication stress response

Thompson, Elizabeth L., Yeo, Jung E., Lee, Eun-A, Kan, Yinan, Raghunandan, Maya, Wiek, Constanze, Hanenberg, Helmut, Schärer, Orlando D., Hendrickson, Eric A., Sobeck, Alexandra

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 12.53 MB

english, 2017

3

CRISPR/Cas9-based genome editing for simultaneous interference with gene expression and protein stability

Martínez, Virginia, Lauritsen, Ida, Hobel, Tonja, Li, Songyuan, Nielsen, Alex Toftgaard, Nørholm, Morten H. H.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 2.23 MB

english, 2017

4

RecQ helicase triggers a binding mode change in the SSB–DNA complex to efficiently initiate DNA unwinding

Mills, Maria, Harami, Gábor M., Seol, Yeonee, Gyimesi, Máté, Martina, Máté, Kovács, Zoltán J., Kovács, Mihály, Neuman, Keir C.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 1.56 MB

english, 2017

5

The nuclear mitotic apparatus protein NuMA controls rDNA transcription and mediates the nucleolar stress response in a p53-independent manner

Jayaraman, Swaathi, Chittiboyina, Shirisha, Bai, Yunfeng, Abad, Patricia C., Vidi, Pierre-Alexandre, Stauffacher, Cynthia V., Lelièvre, Sophie A.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 4.78 MB

english, 2017

6

Dna2 initiates resection at clean DNA double-strand breaks

Paudyal, Sharad C., Li, Shan, Yan, Hong, Hunter, Tony, You, Zhongsheng

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 4.67 MB

english, 2017

7

Incomplete MyoD-induced transdifferentiation is associated with chromatin remodeling deficiencies

Manandhar, Dinesh, Song, Lingyun, Kabadi, Ami, Kwon, Jennifer B., Edsall, Lee E., Ehrlich, Melanie, Tsumagari, Koji, Gersbach, Charles A., Crawford, Gregory E., Gordân, Raluca

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 5.69 MB

english, 2017

8

Cis-regulatory landscapes of four cell types of the retina

Hartl, Dominik, Krebs, Arnaud R., Jüttner, Josephine, Roska, Botond, Schübeler, Dirk

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 2.02 MB

english, 2017

9

Confronting the catalytic dark matter encoded by sequenced genomes

Ellens, Kenneth W., Christian, Nils, Singh, Charandeep, Satagopam, Venkata P., May, Patrick, Linster, Carole L.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 2.87 MB

english, 2017

10

Towards enhanced and interpretable clustering/classification in integrative genomics

Lu, Yang Young, Lv, Jinchi, Fuhrman, Jed A., Sun, Fengzhu

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 885 KB

english, 2017

11

Analysis of primary microRNA loci from nascent transcriptomes reveals regulatory domains governed by chromatin architecture

Bouvy-Liivrand, Maria, Hernández de Sande, Ana, Pölönen, Petri, Mehtonen, Juha, Vuorenmaa, Tapio, Niskanen, Henri, Sinkkonen, Lasse, Kaikkonen, Minna Unelma, Heinäniemi, Merja

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 36 KB

english, 2017

12

TurboFold II: RNA structural alignment and secondary structure prediction informed by multiple homologs

Tan, Zhen, Fu, Yinghan, Sharma, Gaurav, Mathews, David H.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 1.23 MB

english, 2017

13

Cooperative RecA clustering: the key to efficient homology searching

Lee, Andrew J., Sharma, Rajan, Hobbs, Jamie K., Wälti, Christoph

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 929 KB

english, 2017

14

REPARATION: ribosome profiling assisted (re-)annotation of bacterial genomes

Ndah, Elvis, Jonckheere, Veronique, Giess, Adam, Valen, Eivind, Menschaert, Gerben, Van Damme, Petra

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 4.81 MB

english, 2017

15

Cdk5rap1-mediated 2-methylthio-N6-isopentenyladenosine modification is absent from nuclear-derived RNA species

Fakruddin, Md., Wei, Fan Yan, Emura, Shohei, Matsuda, Shigeru, Yasukawa, Takehiro, Kang, Dongchon, Tomizawa, Kazuhito

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 1.89 MB

english, 2017

16

C-terminal lysine repeats in Streptomyces topoisomerase I stabilize the enzyme–DNA complex and confer high enzyme processivity

Strzałka, Agnieszka, Szafran, Marcin J., Strick, Terence, Jakimowicz, Dagmara

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 5.83 MB

english, 2017

17

A pathway for low zinc homeostasis that is conserved in animals and acts in parallel to the pathway for high zinc homeostasis

Dietrich, Nicholas, Schneider, Daniel L., Kornfeld, Kerry

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 3.42 MB

english, 2017

18

Signal recognition particle binds to translating ribosomes before emergence of a signal anchor sequence

Mercier, Evan, Holtkamp, Wolf, Rodnina, Marina V., Wintermeyer, Wolfgang

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 1.73 MB

english, 2017

19

Quantitating translational control: mRNA abundance-dependent and independent contributions and the mRNA sequences that specify them

Li, Jingyi Jessica, Chew, Guo-Liang, Biggin, Mark D.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 11.77 MB

english, 2017

20

Mechanistic insight into the assembly of the HerA–NurA helicase–nuclease DNA end resection complex

Ahdash, Zainab, Lau, Andy M., Byrne, Robert Thomas, Lammens, Katja, Stüetzer, Alexandra, Urlaub, Henning, Booth, Paula J., Reading, Eamonn, Hopfner, Karl-Peter, Politis, Argyris

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 3.88 MB

english, 2017

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