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Volume 45; Issue 5
Main
Nucleic Acids Research
Volume 45; Issue 5
Nucleic Acids Research
Volume 45; Issue 5
1
MAX is an epigenetic sensor of 5-carboxylcytosine and is altered in multiple myeloma
Wang, Dongxue
,
Hashimoto, Hideharu
,
Zhang, Xing
,
Barwick, Benjamin G.
,
Lonial, Sagar
,
Boise, Lawrence H.
,
Vertino, Paula M.
,
Cheng, Xiaodong
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 5.20 MB
Your tags:
english, 2017
2
Competitive binding between Seryl-tRNA synthetase/YY1 complex and NFKB1 at the distal segment results in differential regulation of human vegfa promoter activity during angiogenesis
Fu, Chuan-Yang
,
Wang, Po-Chun
,
Tsai, Huai-Jen
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 4.73 MB
Your tags:
english, 2017
3
RNA-seq mixology: designing realistic control experiments to compare protocols and analysis methods
Holik, Aliaksei Z.
,
Law, Charity W.
,
Liu, Ruijie
,
Wang, Zeya
,
Wang, Wenyi
,
Ahn, Jaeil
,
Asselin-Labat, Marie-Liesse
,
Smyth, Gordon K.
,
Ritchie, Matthew E.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 4.22 MB
Your tags:
english, 2017
4
Folate deficiency facilitates recruitment of upstream binding factor to hot spots of DNA double-strand breaks of rRNA genes and promotes its transcription
Xie, Qiu
,
Li, Caihua
,
Song, Xiaozhen
,
Wu, Lihua
,
Jiang, Qian
,
Qiu, Zhiyong
,
Cao, Haiyan
,
Yu, Kaihui
,
Wan, Chunlei
,
Li, Jianting
,
Yang, Feng
,
Huang, Zebing
,
niu, Bo
,
Jiang, Zhengwen
,
Zhang, Ting
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 8.68 MB
Your tags:
english, 2017
5
And-1 coordinates with CtIP for efficient homologous recombination and DNA damage checkpoint maintenance
Chen, Yali
,
Liu, Hailong
,
Zhang, Haoxing
,
Sun, Changqing
,
Hu, Zhaohua
,
Tian, Qingsong
,
Peng, Changmin
,
Jiang, Pei
,
Hua, Hui
,
Li, Xinzhi
,
Pei, Huadong
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 2.95 MB
Your tags:
english, 2017
6
IDP-ASE: haplotyping and quantifying allele-specific expression at the gene and gene isoform level by hybrid sequencing
Deonovic, Benjamin
,
Wang, Yunhao
,
Weirather, Jason
,
Wang, Xiu-Jie
,
Au, Kin Fai
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 2.91 MB
Your tags:
english, 2017
7
SIRT7-dependent deacetylation of CDK9 activates RNA polymerase II transcription
Blank, Maximilian F.
,
Chen, Sifan
,
Poetz, Fabian
,
Schnölzer, Martina
,
Voit, Renate
,
Grummt, Ingrid
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 2.23 MB
Your tags:
english, 2017
8
TLR4-induced NF-κB and MAPK signaling regulate the IL-6 mRNA stabilizing protein Arid5a
Nyati, Kishan K.
,
Masuda, Kazuya
,
Zaman, Mohammad Mahabub-Uz
,
Dubey, Praveen K.
,
Millrine, David
,
Chalise, Jaya P.
,
Higa, Mitsuru
,
Li, Songling
,
Standley, Daron M.
,
Saito, Kazunobu
,
Hanieh, Hamza
,
Kis
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 8.47 MB
Your tags:
english, 2017
9
Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta
Hong, Samuel
,
Wang, Dongxue
,
Horton, John R.
,
Zhang, Xing
,
Speck, Samuel H.
,
Blumenthal, Robert M.
,
Cheng, Xiaodong
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 5.25 MB
Your tags:
english, 2017
10
A comprehensive approach to expression of L1 loci
Deininger, Prescott
,
Morales, Maria E.
,
White, Travis B.
,
Baddoo, Melody
,
Hedges, Dale J.
,
Servant, Geraldine
,
Srivastav, Sudesh
,
Smither, Madison E.
,
Concha, Monica
,
DeHaro, Dawn L.
,
Flemington, Erik
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 1.65 MB
Your tags:
english, 2017
11
Integration-defective lentiviral vector mediates efficient gene editing through homology-directed repair in human embryonic stem cells
Wang, Yebo
,
Wang, Yingjia
,
Chang, Tammy
,
Huang, He
,
Yee, Jiing-Kuan
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 2.92 MB
Your tags:
english, 2017
12
Managing the sequence-specificity of antisense oligonucleotides in drug discovery
Hagedorn, Peter H.
,
Hansen, Bo R.
,
Koch, Troels
,
Lindow, Morten
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 738 KB
Your tags:
english, 2017
13
And-1 is required for homologous recombination repair by regulating DNA end resection
Li, Yongming
,
Li, Zongzhu
,
Wu, Ruiqin
,
Han, Zhiyong
,
Zhu, Wenge
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 4.90 MB
Your tags:
english, 2017
14
Binding of MBD proteins to DNA blocks Tet1 function thereby modulating transcriptional noise
Ludwig, Anne K.
,
Zhang, Peng
,
Hastert, Florian D.
,
Meyer, Stephanie
,
Rausch, Cathia
,
Herce, Henry D.
,
Müller, Udo
,
Lehmkuhl, Anne
,
Hellmann, Ines
,
Trummer, Carina
,
Storm, Christian
,
Leonhardt, Heinric
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 1.66 MB
Your tags:
english, 2017
15
A high-throughput approach to profile RNA structure
Delli Ponti, Riccardo
,
Marti, Stefanie
,
Armaos, Alexandros
,
Tartaglia, Gian Gaetano
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 2.06 MB
Your tags:
english, 2017
16
Models of global gene expression define major domains of cell type and tissue identity
Hutchins, Andrew P.
,
Yang, Zhongzhou
,
Li, Yuhao
,
He, Fangfang
,
Fu, Xiuling
,
Wang, Xiaoshan
,
Li, Dongwei
,
Liu, Kairong
,
He, Jiangping
,
Wang, Yong
,
Chen, Jiekai
,
Esteban, Miguel A.
,
Pei, Duanqing
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 12.75 MB
Your tags:
english, 2017
17
Characterizing the effect of GalNAc and phosphorothioate backbone on binding of antisense oligonucleotides to the asialoglycoprotein receptor
Schmidt, Karsten
,
Prakash, Thazha P.
,
Donner, Aaron J.
,
Kinberger, Garth A.
,
Gaus, Hans J.
,
Low, Audrey
,
Østergaard, Michael E.
,
Bell, Melanie
,
Swayze, Eric E.
,
Seth, Punit P.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 903 KB
Your tags:
english, 2017
18
Cancer-causing mutations in the tumor suppressor PALB2 reveal a novel cancer mechanism using a hidden nuclear export signal in the WD40 repeat motif
Pauty, Joris
,
Couturier, Anthony M.
,
Rodrigue, Amélie
,
Caron, Marie-Christine
,
Coulombe, Yan
,
Dellaire, Graham
,
Masson, Jean-Yves
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 4.65 MB
Your tags:
english, 2017
19
Structured and disordered regions cooperatively mediate DNA-binding autoinhibition of ETS factors ETV1, ETV4 and ETV5
Currie, Simon L.
,
Lau, Desmond K. W.
,
Doane, Jedediah J.
,
Whitby, Frank G.
,
Okon, Mark
,
McIntosh, Lawrence P.
,
Graves, Barbara J.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 4.19 MB
Your tags:
english, 2017
20
Core binding factor (CBF) is required for Epstein-Barr virus EBNA3 proteins to regulate target gene expression
Paschos, Kostas
,
Bazot, Quentin
,
Ho, Guiyi
,
Parker, Gillian A.
,
Lees, Jonathan
,
Barton, Geraint
,
Allday, Martin J.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 4.67 MB
Your tags:
english, 2017
21
sCNAphase: using haplotype resolved read depth to genotype somatic copy number alterations from low cellularity aneuploid tumors
Chen, Wenhan
,
Robertson, Alan J.
,
Ganesamoorthy, Devika
,
Coin, Lachlan J.M.
Journal:
Nucleic Acids Research
Year:
2017
File:
PDF, 2.84 MB
Your tags:
2017
22
PATZ1 down-regulates FADS1 by binding to rs174557 and is opposed by SP1/SREBP1c
Pan, Gang
,
Ameur, Adam
,
Enroth, Stefan
,
Bysani, Madhusudhan
,
Nord, Helena
,
Cavalli, Marco
,
Essand, Magnus
,
Gyllensten, Ulf
,
Wadelius, Claes
Journal:
Nucleic Acids Research
Year:
2017
File:
PDF, 563 KB
Your tags:
2017
23
sCNAphase: using haplotype resolved read depth to genotype somatic copy number alterations from low cellularity aneuploid tumors
Chen, Wenhan
,
Robertson, Alan J.
,
Ganesamoorthy, Devika
,
Coin, Lachlan J.M.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 2.84 MB
Your tags:
english, 2017
24
PATZ1 down-regulates FADS1 by binding to rs174557 and is opposed by SP1/SREBP1c
Pan, Gang
,
Ameur, Adam
,
Enroth, Stefan
,
Bysani, Madhusudhan
,
Nord, Helena
,
Cavalli, Marco
,
Essand, Magnus
,
Gyllensten, Ulf
,
Wadelius, Claes
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 563 KB
Your tags:
english, 2017
25
Sub1 contacts the RNA polymerase II stalk to modulate mRNA synthesis
Garavís, Miguel
,
González-Polo, Noelia
,
Allepuz-Fuster, Paula
,
Louro, Jaime Alegrio
,
Fernández-Tornero, Carlos
,
Calvo, Olga
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 1.82 MB
Your tags:
english, 2017
26
Discovery and validation of information theory-based transcription factor and cofactor binding site motifs
Lu, Ruipeng
,
Mucaki, Eliseos J.
,
Rogan, Peter K.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 6.70 MB
Your tags:
english, 2017
27
GPCRdb: an information system for G protein-coupled receptors
Isberg, Vignir
,
Mordalski, Stefan
,
Munk, Christian
,
Rataj, Krzysztof
,
Harpsøe, Kasper
,
Hauser, Alexander S.
,
Vroling, Bas
,
Bojarski, Andrzej J.
,
Vriend, Gert
,
Gloriam, David E.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 64 KB
Your tags:
english, 2017
28
Temporal association of ORCA/LRWD1 to late-firing origins during G1 dictates heterochromatin replication and organization
Wang, Yating
,
Khan, Abid
,
Marks, Anna B.
,
Smith, Owen K.
,
Giri, Sumanprava
,
Lin, Yo-Chuen
,
Creager, Rachel
,
MacAlpine, David M.
,
Prasanth, Kannanganattu V.
,
Aladjem, Mirit I.
,
Prasanth, Supriya G.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 4.75 MB
Your tags:
english, 2017
29
Human RECQL1 participates in telomere maintenance
Popuri, Venkateswarlu
,
Hsu, Joseph
,
Khadka, Prabhat
,
Horvath, Kent
,
Liu, Yie
,
Croteau, Deborah L.
,
Bohr, Vilhelm A.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 202 KB
Your tags:
english, 2017
30
Production of DNA minicircles less than 250 base pairs through a novel concentrated DNA circularization assay enabling minicircle design with NF-κB inhibition activity
Thibault, Thomas
,
Degrouard, Jeril
,
Baril, Patrick
,
Pichon, Chantal
,
Midoux, Patrick
,
Malinge, Jean-Marc
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 3.95 MB
Your tags:
english, 2017
31
Degradation of Mrc1 promotes recombination-mediated restart of stalled replication forks
Chaudhury, Indrajit
,
Koepp, Deanna M.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 4.23 MB
Your tags:
english, 2017
32
Duplication-Insertion Recombineering: a fast and scar-free method for efficient transfer of multiple mutations in bacteria
Näsvall, Joakim
,
Knöppel, Anna
,
Andersson, Dan I.
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 578 KB
Your tags:
english, 2017
33
Inhibiting translation elongation can aid genome duplication in Escherichia coli
Myka, Kamila K.
,
Hawkins, Michelle
,
Syeda, Aisha H.
,
Gupta, Milind K.
,
Meharg, Caroline
,
Dillingham, Mark S.
,
Savery, Nigel J.
,
Lloyd, Robert G.
,
McGlynn, Peter
Journal:
Nucleic Acids Research
Year:
2017
Language:
english
File:
PDF, 6.36 MB
Your tags:
english, 2017
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