Volume 2; Issue 1

Nucleic Acids Symposium Series

Volume 2; Issue 1

1

Synthesis of carbocyclic 5'-Nor uridine and cytidine derivatives

Koga, M., Kanda, M., Yamamuro, T., Tamai, K., Uchida, T., Suzuki, T., Saeki, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 146 KB

english, 2002

2

Development and application of siRNA expression vector

Miyagishi, M., Taira, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 161 KB

english, 2002

3

Distamycin A, a minor groove binder, changes enediyne-induced DNA cleavage sites and enhances apoptosis

Hiraku, Y., Oikawa, S., Kawanishi, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 147 KB

english, 2002

4

Anticancer mechanisms of 1-(3-C-ethynyl- -D-ribopentofuranosyl) cytosine (Ecyd, TAS-106)

Naito, T., Yokogawa, T., Kim, H.-S., Futagami, M., Wataya, Y., Matsuda, A., Fukushima, M., Kitade, Y., Sasaki, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 170 KB

english, 2002

5

Binding of threading intercalator to nucleic acids: Thermodynamic analyses

Torigoe, H., Sato, S., Yamashita, K.-i., Obika, S., Imanishi, T., Takenaka, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 181 KB

english, 2002

6

The molecular dynamics thermocycler. A new approach to sample conformational space, as exemplified by the RNA hairpin

Bielecki, L., Popenda, M., Adamiak, R. W.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 216 KB

english, 2002

7

Application of peptide nucleic acid (PNA) for detection of transcription factors binding probes

Fujimori, F., Kitagawa, F., Abe, Y., Ohori, Y., Kiyota, R., Nakamura, Y., Ikeda, H., Murakami, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 117 KB

english, 2002

8

Isolation of temperature sensitive mutants and their mapping in Agrobacterium tumefaciens

Taga, T., Hino, M., Suzuki, K., Yoshida, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1013 KB

english, 2002

9

A novel heme-DNA coordination complex and its stability

Mikuma, T., Terui, N., Yamamoto, Y., Hori, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 144 KB

english, 2002

10

Down regulation of human immunodeficiency virus type-1 (HIV-1) expression by Vif antisense RNA expression vectors in transfected cells

Barnor, J. S., Miyano-Kurosaki, N., Yamaguchi, K., Kobayashi, H., Ishikawa, K., Osei-Kwasi, M., Ampofo, W. K., Ofori-Adjei, D., Inagaki, Y., Yamamoto, N., Takaku, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 155 KB

english, 2002

11

Genomic analysis of mefloquine-resistant Plasmodium falciparum

Begum, K., Kim, H.-S., Okuda, Y., Wataya, Y., Kimura, M., Huruta, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 127 KB

english, 2002

12

Down-regulation of VEGF mRNA expression by 2'-O,4'-C-ethylene-bridged nucleic acid (ENA) antisense oligonucleotides and investigation of non-target gene expression

Morita, K., Yamate, K., Kurakata, S.-i., Abe, K., Imanishi, T., Koizumi, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 191 KB

english, 2002

13

Patassium sensing oligonucleotide, PSO, based on DNA tetraplex formation

Nojima, T., Ueyama, H., Takagi, M., Takenaka, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 142 KB

english, 2002

14

Mono(ADP-ribosyl)ation of DNA by apoptosis-inducing protein, pierisin

Watanabe, M., Takamura-Enya, T., Kanazawa, T., Totsuka, Y., Matsushima-Hibiya, Y., Koyama, K., Sugimura, T., Wakabayashi, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 152 KB

english, 2002

15

Physicochemical analysis of nucleobase-metal interactions

Tanaka, Y., Toyozawa, A., Kondo, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 209 KB

english, 2002

16

The role of deoxycytidyl transferase activity of yeast Rev1 protein in the bypass of abasic sites

Otsuka, C., Loakes, D., Negishi, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 114 KB

english, 2002

17

Synthesis and application of bis (tert-butyl)-1-methyl pyrenyl-silyl chloride as a 5'-hydroxyl protecting group for nucleosides and as a fluorescent purification handle in oligonucleotide synthesis

Tripathi, S., Misra, K., Sanghvi, Y. S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 162 KB

english, 2002

18

Development of novel whole-mount in situ hybridization (WISH)

Ikeda, H., Tonosaki, M., Sugiyama, A., Tashiro, F., Nakamura, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 136 KB

english, 2002

19

A new strategy for the synthesis of oligodeoxynucleotides in the phosphoramidite method without base protection via phosphite intermediates

Ohkubo, A., Ezawa, Y., Seio, K., Sekine, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 142 KB

english, 2002

20

Reaction mechanism for the stereoselective internucleotidic bond formation by the oxazaphospholidine approach

Wada, T., Oka, N., Saigo, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 194 KB

english, 2002

21

Synthesis and properties of N-t-butylaminoxyl nucleosides

Kaneko, T., Aso, M., Nakamura, M., Matsui, Y., Koga, N., Suemune, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 118 KB

english, 2002

22

A new strategy to determine the target DNA sequence of a short peptide

Sato, S.-i., Honjyo, H., Tsuji, S., Hagihara, M., Makino, K., Morii, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 186 KB

english, 2002

23

An unnatural base pair between imidazolin-2-one and 2-amino-6-(2-thienyl)purine in replication and transcription

Hirao, I., Kimoto, M., Mitsui, T., Harada, Y., Fujiwara, T., Sato, A., Yokoyama, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 132 KB

english, 2002

24

Enzymatic incorporation of an unnatural base pair between 4-propynyl-pyrrole-2-carbaldehyde and 9-methyl-imidazo[(4,5)-b]pyridine into nucleic acids

Mitsui, T., Kimoto, M., Harada, Y., Sato, A., Kitamura, A., To, T., Hirao, I., Yokoyama, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 137 KB

english, 2002

25

Selection of RNA-binding peptides containing Arg-rich motif

Shimada, N., Oniwa, K., Iwase, R., Yamaoka, T., Murakami, A.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 113 KB

english, 2002

26

Alpha-helix substitution: Novel approach for the design of a new zinc finger peptides for AT-rich sequence

Nagaoka, M., Doi, Y., Kuwahara, J., Sugiura, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.19 MB

english, 2002

27

Quadruplex structures of RNA 14-mer, r(GGAGGUUUUGGAGG) and DNA 14-mer, d(GGAGGTTTTGGAGG)

Liu, H., Kugimiya, A., Matsugami, A., Katahira, M., Uesugi, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 173 KB

english, 2002

28

Differences in tyrosine tRNA identity between Escherichia coli and archaeon, Aeropyrum pernix K1

Iwaki, J., Asahara, H., Nagaoka, Y., Yokozawa, J., Umehara, T., Kawarabayasi, Y., Koyama, Y., Sako, Y., Kuno, A., Hasegawa, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 140 KB

english, 2002

29

N4,5-dimethylcytosine, a novel hypermodified base in DNA

Klimasauskas, S., Gerasimaite, R., Vilkaitis, G., Kulakauskas, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 174 KB

english, 2002

30

Crystallization and preliminary X-ray diffraction studies of HutP protein: An RNA-binding protein that regulates the transcription of hut operon in Bacillus subtilis

Kumarevel, T., Fujimoto, Z., Oda, M., Nishikawa, S., Mizuno, H., Kumar, P. K.R.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.10 MB

english, 2002

31

Thermodynamic analysis of hybridization between POPNA and DNA

Kitamatsu, M., Shigeyasu, M., Okada, T., Nakai, T., Saitou, M., Sisido, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 140 KB

english, 2002

32

Regulation of gene expresssion by sequence-specific alkylating polyamide

Oyoshi, T., Kawakami, W., Bando, T., Narita, A., Sugiyama, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 133 KB

english, 2002

33

Structure of DNA-RecA protein complex, intermediate of homologous recombination, determined by polarised-light spectroscopy

Takahashi, M., Morimatsu, K., Norden, B.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 166 KB

english, 2002

34

Enzymatic incorporation of chemically-modified nucleotides into DNAs

Kuwahara, M., Ohbayashi, T., Hanawa, K., Shoji, A., Ozaki, A. N., Ozaki, H., Sawai, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 141 KB

english, 2002

35

Ring opening of nucleosidic 1',2'-epoxides with aluminum reagent: A new stereoselective entry to 1'-C-substituted ribonucleosides

Haraguchi, K., Kubota, Y., Tanaka, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 113 KB

english, 2002

36

Conformation dependent DNA photoligation via sensitizer tethered 5-carboxyvinyluracil

Fujimoto, K., Yoshino, H., Saito, I.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.08 MB

english, 2002

37

Trans-kingdom conjugation in vitro by using toluenized cells

Tonomoto, R., Sonoda, H., Suzuki, K., Yoshida, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.27 MB

english, 2002

38

The structure and function of tmRNA

Takada, K., Hanawa, K., Lee, S. G., Himeno, H., Muto, A.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 151 KB

english, 2002

39

Gene mutation assay using a MutS protein-modified electrode

Han, A., Shibata, T., Takarada, T., Maeda, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 138 KB

english, 2002

40

Synthesis and properties of 5'-amino-2',4'-BNA modified oligonucleotides with P3'->N5' phosphoramidate linkages

Obika, S., Nakagawa, O., Hiroto, A., Hari, Y., Imanishi, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 178 KB

english, 2002

41

Discovery of a novel route to 2'-deoxy and 2'-functional pyrimidine nucleosides via 3',5'-O-sulfinyl xylo-nucleosides

Takatsuki, K.-i., Kohmoto, S., Kishikawa, K., Yamashita, H., Yamamoto, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 122 KB

english, 2002

42

Recognition of DNA mismatch structures

Hagihara, S., Nakatani, K., Saito, I.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 163 KB

english, 2002

43

Identification of AP-2-regulated genes by macroarray profiling of gene expression in human A375P melanoma

Suyama, E., Minoshima, H., Kawasaki, H., Taira, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 183 KB

english, 2002

44

Study on the inhibition of protein production by L-cysteine derivatives of nucleic acid bases

Inaki, Y., Maruoka, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 180 KB

english, 2002

45

Molecular dynamics investigation of the double stranded oligonucleotide d(AT)6d(AT)6

Fujii, S., Okimoto, N., Ebisuzaki, T., Nojima, T., Takagi, M., Takenaka, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 188 KB

english, 2002

46

Nonenzymatic DNA ligation in Escherichia coli cells

Sando, S., Kool, E. T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 992 KB

english, 2002

47

In vitro selection of RNA aptamers that bind to domain II of HCV IRES

Kikuchi, K., Fukuda, K., Umehara, T., Hwang, J., Kuno, A., Hasegawa, T., Nishikawa, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 189 KB

english, 2002

48

A novel C-C bond formation at the 5-position of uridine derivatives

Sajiki, H., Yamada, A., Yasunaga, K., Tsunoda, T., Amer, M. F. A., Hirota, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 167 KB

english, 2002

49

Solution structure of the DNA complexes with an alkyl-linked bis(benzimidazole) compound, 1,4-bis[5-(4-methyl-1-piperazinyl)-2-benzimidazolyl]butane

Liu, J., Tani, S., Kubota, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 181 KB

english, 2002

50

Chemical probing and electron microscopic analysis of alternative DNA structure formed in an inverted repeat sequence

Hokabe, S., Gurkov, T. D., Okawara, H., Nagayama, K., Minoshima, S., Shimizu, N., Kato, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.01 MB

english, 2002

51

Development of HIV-1 dependent gene expression vector with the Cre/IoxP (ON) system

Nagawa, T., Habu, Y., Matsumoto, N., Takeuchi, H., Kurosaki, N., Takaku, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 124 KB

english, 2002

52

Molecular sensing by pyrene excimer signal of fluorescent DNA aptamer

Ohtani, Y., Yamana, K., Nakano, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 140 KB

english, 2002

53

Utility of Porous Glass(R) with a new long-chain alkylamine spacer arm as a solid support for synthesis of oligodeoxyribonucleotides via the phosphoramidite method

Kawai, R., Okino, S., Kataoka, M., Kambe, E., Hayakawa, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 134 KB

english, 2002

54

Induction of apoptosis in HeLa cells with siRNA expression vector targeted against bcl-2

Futami, T., Miyagishi, M., Seki, M., Taira, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.19 MB

english, 2002

55

The X-ray crystallographic study of long chain left handed Z-DNA and polyamine complex and structural chemistry study of effection by polyamine for the Z-DNA

Ohishi, H., Suzuki, K., Grzeskowiak, K., Fukuyama, K., Ishida, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.16 MB

english, 2002

56

Functional regulation of biomolecule using DNA-conjugation

Anada, T., Kano, T., Kaku, W., Katayama, Y., Maeda, M., Murata, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.04 MB

english, 2002

57

Synthesis of PNA using a Fmoc/Boc protecting group strategy

Sugiyama, T., Kittaka, A., Takemoto, Y., Takayama, H., Kuroda, R.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 98 KB

english, 2002

58

The role of nucleosome positioning in repression by the yeast 2/Mcm1p repressor

Saito, S., Miura, S., Yamamoto, Y., Shindo, H., Shimizu, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 145 KB

english, 2002

59

Extensive methylation of CpG island of CYP24 gene in osteoblastic ROS17/2.8 cells

Ohyama, Y., Kusada, T., Yamasaki, T., Ide, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 146 KB

english, 2002

60

Theoretical study of substitution effect of the hydrogen bond stability of 9-methylguanine derivatives and 1-methylcytosine

Kawahara, S.-i., Sekine, M., Taira, K., Kobayashi, H., Uchimaru, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 135 KB

english, 2002

61

tRNA Recognition by CCA-adding enzyme

Tomari, Y., Suzuki, T., Ueda, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 152 KB

english, 2002

62

Design of intelligent nucleobases and DNA HOMO mapping

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 140 KB

english, 2002

63

A new approach for the cooperative chemical evolution of nucleic acids and proteins under the primitive earth environment

Nagahama, M., Kawamura, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 178 KB

english, 2002

64

X-ray structure of d(CGAA), parallel-stranded DNA duplex with homo base pairs

Kobuna, T., Sunami, T., Kondo, J., Takenaka, A.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 167 KB

english, 2002

65

Novel approach for SNP genotyping based on site-selective RNA scission

Kuzuya, A., Mizoguchi, R., Morisawa, F., Komiyama, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 125 KB

english, 2002

66

Structural change of G-quartet by 5'-elongation of telomere DNA oligomer

Kanaori, K., Yoshida, S., Shoji, T., Tajima, K., Makino, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 149 KB

english, 2002

67

Effect of chemical features and stability of polyplexes on their gene transfer efficiency

Yamaoka, T., Kimura, T., Kitagawa, T., Iwase, R., Murakami, A.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.74 MB

english, 2002

68

Kinetic analysis of nucleotides incorporated opposite oxidized thymine bases on template DNA

Miyashita, T., Ono, A., Izuta, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 2.22 MB

english, 2002

69

RNA cleavage efficiency and catalytic turnover of an oligonucleotide-two copper complexes conjugate

Sakamoto, S., Tamura, T., Furukawa, T., Komatsu, Y., Ohtsuka, E., Kitamura, M., Inoue, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 134 KB

english, 2002

70

Synthesis and properties of oligonucleotides containing novel 2',4'-BNA analogues (2',4'-BNACOC)

Hari, Y., Osaki, T., Eguchi, K., Obika, S., Imanishi, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 166 KB

english, 2002

71

Synthesis and biological activity of adenophostin derivatives as IP3 receptor ligands

Shuto, S., Mochizuki, T., Abe, H., Kondo, Y., Matsuda, A.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 148 KB

english, 2002

72

Binding analysis between naphthyridine dimers and GG mismatch DNA

Kobori, A., Kumasawa, H., Nakatani, K., Saito, I.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 144 KB

english, 2002

73

Interaction of several Ni(III) complexes of peptides with DNA; Analysis by DNA-fiber EPR

Yamanaka, M., Chikira, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 163 KB

english, 2002

74

Design and synthesis of modified nucleic acid systems

Kim, S. J., Lee, Y.-S., Kim, B. H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 138 KB

english, 2002

75

X-ray structure of d(GCGAAGC); Switching of partner for G:A pair in duplex form

Sunami, T., Kondo, J., Tsunoda, M., Sekiguchi, T., Hirao, I., Watanabe, K., Miura, K.-i., Takenaka, A.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 190 KB

english, 2002

76

Hybridization ability and base pair geometry of modified deoxycytidine derivatives having a 4-N-carbamoyl group

Miyata, K., Kobori, A., Seio, K., Sekine, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 148 KB

english, 2002

77

Computational analysis of stacking interactions between 3-nitropyrrole and natural nucleobases

Ukawa, H., Seio, K., Sekine, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 133 KB

english, 2002

78

Mutagenesis targeted by triple-helix forming oligonucleotides containing a reactive nucleoside analogue

Nagatsugi, F., Sasaki, S., Seidmen, M. M., Miller, P. S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 176 KB

english, 2002

79

Regulation of bacterial RNase P ribozyme reaction by divalent cation and guide DNA

Ando, T., Tanaka, T., Hori, Y., Kikuchi, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 157 KB

english, 2002

80

Triplex formation involving 2',4'-BNA with isoquinolone base analogue: Efficient and selective recognition of C:G interruption

Torigoe, H., Hari, Y., Obika, S., Imanishi, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 174 KB

english, 2002

81

RNA motif database catalogued by kink parameters

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 178 KB

english, 2002

82

2-Amino-6-vinyl purine as a tool for post synthetic conjugatjon of DNA with radio-, spin-, fluorescence labels and peptides

Ali, Md. M., Nagatsugi, F., Yamamoto, F., Maeda, M., Sasaki, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 171 KB

english, 2002

83

In vitro selection of N peptide-binding RNA on a quartz-crystal microbalance

Murakawa, A., Fukusho, S., Furusawa, H., Okahata, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 177 KB

english, 2002

84

Transcriptional regulation of the c-jun gene by AP-1 repressor protein JDP2 during the differentiation of F9 cells

Jin, C., Li, H., Ugai, H., Murata, T., Yokoyama, K. K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 193 KB

english, 2002

85

Molecular design of hairpin polyamide possessing sequence-specific alkylation activity

Narita, A., Bando, T., Sugiyama, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 147 KB

english, 2002

86

Chemical synthesis of novel taurine-containing uridine derivatives

Wada, T., Shimazaki, T., Nakagawa, S., Otuki, T., Kurata, S., Suzuki, T., Watanabe, K., Saigo, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 147 KB

english, 2002

87

Design of a molecular beacon PNA

Kitagawa, F., Ohori, Y., Ikeda, H., Fujimori, H., Murakami, Y., Nakamura, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 142 KB

english, 2002

88

Molecular recognition of threonine tRNA by threonyl-tRNA synthetase from an extreme thermophilic archaeon, Aeropyrum pernix K1

Nagaoka, Y., Yokozawa, J., Umehara, T., Iwaki, J., Okamoto, K., Kawarabayasi, Y., Koyama, Y., Sako, Y., Wakagi, T., Kuno, A., Hasegawa, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 172 KB

english, 2002

89

Useful technique for DNA-stretching and fixation

Nakao, H., Hayashi, H., Yoshino, T., Sugiyama, S., Otobe, K., Ohtani, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.41 MB

english, 2002

90

Application of L-cystein derivative to DNA microarray

Nakauchi, G., Inaki, Y., Kitaoka, S., Yokoyama, C., Tanabe, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.23 MB

english, 2002

91

Detection of single nucleotide polymorphisms by the combination of nuclease S1 and PNA

Ye, S., Liang, X., Yamamoto, Y., Komiyama, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 142 KB

english, 2002

92

Anti-HIV-1 activity of L-DNA quadruplex

Urata, H., Kumashiro, T., Otake, T., Kawahata, T., Akagi, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 143 KB

english, 2002

93

Identification of Aquifex aeolicus tRNA (m22G26) methyltransferase gene

Takeda, H., Hori, H., Endo, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 155 KB

english, 2002

94

Construction of an allosteric trans-maxizyme targeting for two distinct oncogenes

Iyo, M., Kawasaki, H., Taira, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 130 KB

english, 2002

95

Synthesis of a novel anticancer prodrug designed to target telomerase sequence

Mishra, S., Tripathi, S., Misra, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 159 KB

english, 2002

96

Synthesis of the antisense oligonucleotides carrying the modified 2-5A molecules at their 5'-termini and their properties

Ueno, Y., Kato, Y., Okatani, S., Kitade, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 160 KB

english, 2002

97

Synthesis of noraristeromycin analogues possessing SAH hydrolase inhibitory activity for the development of antimalaria agents

Kojima, H., Yamaguchi, T., Kozaki, A., Nakanishi, M., Ueno, Y., Kitade, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 138 KB

english, 2002

98

DNA recognition control of -PRNA and mismatched base effects upon complex stability

Sato, H., Hashimoto, Y., Kikkawa, M., Wada, T., Inoue, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 187 KB

english, 2002

99

DNA topology: Topological transformation of DNA by reaction of cisplatin-DNA-core histone complexes with human DNA topoisomerase

Kobayashi, S., Nakagawa, S., Uehara, N., Hamashima, H., Tanaka, A.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 915 KB

english, 2002

100

Ion-channel sensors for electrochemical detection of DNA based on self-assembled PNA monolayers

Aoki, H., Umezawa, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 204 KB

english, 2002

101

Aminoacylation of tRNA by antisense molecule

Ninomiya, K., Endo, T., Minohata, T., Tajiri, M., Suzuki, M., Kurita, T., Hohsaka, T., Sisido, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 94 KB

english, 2002

102

The interaction of 2-phenylbenzimidazole compounds with DNA: The influence of terminal substituents

Kubota, Y., Tani, S., Nakamura, J.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 183 KB

english, 2002

103

A novel fluorescent nonnatural amino acid that can be incorporated into a specific position of streptavidin

Taki, M., Hohsaka, T., Murakami, H., Kuno, A., Hasegawa, T., Taira, K., Sisido, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.31 MB

english, 2002

104

Investigation of DNA strand exchange mechanisms mediated by cationic polymers

Sato, Y., Kim, W. J., Choi, S. W., Saito, M., Kano, A., Akaike, T., Maruyama, A.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 140 KB

english, 2002

105

RNA cleavage by a mammalian tRNA 3'processing endoribonuclease (3'tRNase) reduces HIV-1 expression

Yukita, M., Kitano, M., Miyano-Kurosaki, N., Takeuchi, H., Nashimoto, M., Takaku, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 151 KB

english, 2002

106

Reaction of 4',5'-epoxynucleosides with carbon nucleophiles: Stereoselective synthesis of 4'-C-carbon-substituted nucleosides

Haraguchi, K., Takeda, S., Tanaka, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 115 KB

english, 2002

107

Real-time detection of PCR products for comparative analysis of expressed genes using module-shuffling TaqMan Probes (MTPs)

Uematsu, C., Makino, I., Okano, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 180 KB

english, 2002

108

Synthesis of adamantyl naphthalene diimide and its interaction with double stranded DNA

Sato, S., Nojima, T., Takagi, M., Kondo, H., Takenaka, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 160 KB

english, 2002

109

Probing DNA sequences by anthraquinone-modified DNA that is immobilized on gold surface

Kumamoto, S., Kawakami, N., Fujishima, T., Ohtsuka, T., Yamana, K., Nakano, H., Sugie, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.32 MB

english, 2002

110

Direct monitoring of EcoRII restriction enzyme reactions on a 27MHz quartz-crystal microbalance

Takahashi, S., Matsuno, H., Furusawa, H., Okahata, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 185 KB

english, 2002

111

Formation and stability of alternate-stranded triplex formed with alpha,beta-chimeric oligoDNA

Hirose, Y., Kadoya, A., Matsumoto, N., Miyashita, T., Moriguchi, T., Shinozuka, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 152 KB

english, 2002

112

Telomerase-inhibitory effects of sugar-modified nucleotide analogs

Jinmei, H., Takahashi, H., Amano, R., Suzuki, K., Saneyoshi, M., Yamaguchi, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.23 MB

english, 2002

113

Selective formation of non-natural type triplexes containing TA interrupting sites with the TFO incorporating W-shape nucleic acid (WNA) analogs

Taniguchi, Y., Takahashi, R., Kodama, K., Senko, Y., Maeda, M., Sasaki, S.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 196 KB

english, 2002

114

Analysis of single nucleotide polymorphisms in uridine/cytidine kinase gene encoding metabolic enzyme of 3'-ethynylcytidine

Hasegawa, T., Futagami, M., Kim, H.-S., Matsuda, A., Wataya, Y.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 119 KB

english, 2002

115

Development of new amination reaction at 4-position of pyrimidine nucleosides

Tsuchiya, K., Komatsu, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 101 KB

english, 2002

116

Quality control of translation through the kinetic discrimination of tRNAs in the network of aminoacyl-tRNA synthetases

Shimada, N., Matsuzaki, K., Suzuki, T., Suzuki, T., Watanabe, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 169 KB

english, 2002

117

Cytidine protonation and base-pair intercalation in nucleic acid structures: The i-motif

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 132 KB

english, 2002

118

Modeling of a possible evolutional process from a ribozyme to a catalytic RNP

Ikawa, Y., Tsuda, K., Matsumura, S., Atsumi, S., Inoue, T.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 101 KB

english, 2002

119

Effects of triplet repeat sequences on nucleosome positioning and gene expression in yeast minichromosomes

Tomita, N., Fujita, R., Kurihara, D., Shindo, H., Wells, R. D., Shimizu, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 159 KB

english, 2002

120

Control of photo-induced drug release by the use of conformational change of DNA

Tanabe, K., Inasaki, T., Okamoto, A., Nishimoto, S.-i., Saito, I.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 132 KB

english, 2002

121

Modulation of beta-secretase gene expression by action of catalytic nucleic acids

Nawrot, B., Antoszczyk, S., Maszewska, M., Rebowski, G., Kuwabara, T., Warashina, M., Taira, K., Stec, W. J.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.27 MB

english, 2002

122

An anthracene derivative carrying ferrocenyl moieties at its 9 and 10 positions as a new electrochemically active threading intercalator

Takenaka, S., Ohtuka, K., Miyahara, H., Nojima, T., Takagi, M.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 151 KB

english, 2002

123

Substrate recognition by the human MTH1 protein

Kamiya, H., Dugue, L., Yakushiji, H., Pochet, S., Nakabeppu, Y., Harashima, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 139 KB

english, 2002

124

Modified DNA aptamers against sweet agent aspartame

Saitoh, H., Nakamura, A., Kuwahara, M., Ozaki, H., Sawai, H.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 127 KB

english, 2002

125

RNA LEGO: Magnesium-dependent assembly of RNA building blocks through loop-loop interactions

Horiya, S., Li, X., Kawai, G., Saito, R., Katoh, A., Kobayashi, K., Harada, K.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 1.15 MB

english, 2002

126

Effect of secondary structure of short double-stranded RNA on RNAi efficiency

Ohmichi, T., Karimata, H., Sugimoto, N.

Journal:

Nucleic Acids Symposium Series

Year:

2002

Language:

english

File:

PDF, 154 KB

english, 2002