Volume 368; Issue 1614

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Philosophical Transactions Biological Sciences
Volume 368; Issue 1614

Philosophical Transactions Biological Sciences

Volume 368; Issue 1614

1

Graph hierarchies for phylogeography

Cybis, G. B., Sinsheimer, J. S., Lemey, P., Suchard, M. A.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 738 KB

english, 2013

2

The evolutionary dynamics of influenza A virus adaptation to mammalian hosts

Bhatt, S., Lam, T. T., Lycett, S. J., Leigh Brown, A. J., Bowden, T. A., Holmes, E. C., Guan, Y., Wood, J. L. N., Brown, I. H., Kellam, P., Pybus, O. G.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 818 KB

english, 2013

3

The evolutionary dynamics of receptor binding avidity in influenza A: a mathematical model for a new antigenic drift hypothesis

Yuan, H.-Y., Koelle, K.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 648 KB

english, 2013

4

The antigenic evolution of influenza: drift or thrift?

Wikramaratna, P. S., Sandeman, M., Recker, M., Gupta, S.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 955 KB

english, 2013

5

Molecular evolutionary signatures reveal the role of host ecological dynamics in viral disease emergence and spread

Duke-Sylvester, S. M., Biek, R., Real, L. A.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 691 KB

english, 2013

6

Bacterial genomes in epidemiology--present and future

Croucher, N. J., Harris, S. R., Grad, Y. H., Hanage, W. P.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 388 KB

english, 2013

7

Global mapping of infectious disease

Hay, S. I., Battle, K. E., Pigott, D. M., Smith, D. L., Moyes, C. L., Bhatt, S., Brownstein, J. S., Collier, N., Myers, M. F., George, D. B., Gething, P. W.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 938 KB

english, 2013

8

Viral population analysis and minority-variant detection using short read next-generation sequencing

Watson, S. J., Welkers, M. R. A., Depledge, D. P., Coulter, E., Breuer, J. M., de Jong, M. D., Kellam, P.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 694 KB

english, 2013

9

Observing micro-evolutionary processes of viral populations at multiple scales

Orton, R. J., Wright, C. F., Morelli, M. J., Juleff, N., Thebaud, G., Knowles, N. J., Valdazo-Gonzalez, B., Paton, D. J., King, D. P., Haydon, D. T.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 539 KB

english, 2013

10

Modelling tree shape and structure in viral phylodynamics

Frost, S. D. W., Volz, E. M.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 6.10 MB

english, 2013

11

Coalescent inference for infectious disease: meta-analysis of hepatitis C

Dearlove, B., Wilson, D. J.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 715 KB

english, 2013

12

Uncovering epidemiological dynamics in heterogeneous host populations using phylogenetic methods

Stadler, T., Bonhoeffer, S.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 504 KB

english, 2013

13

Virulence attenuation during an influenza A/H5N1 pandemic

Boni, M. F., Nguyen, T. D., de Jong, M. D., van Doorn, H. R.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 981 KB

english, 2013

14

Multiple scales of selection influence the evolutionary emergence of novel pathogens

Park, M., Loverdo, C., Schreiber, S. J., Lloyd-Smith, J. O.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 670 KB

english, 2013

15

Evolutionary epidemiology: preparing for an age of genomic plenty

Pybus, O. G., Fraser, C., Rambaut, A.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 188 KB

english, 2013

16

Contrasting the epidemiological and evolutionary dynamics of influenza spatial transmission

Viboud, C., Nelson, M. I., Tan, Y., Holmes, E. C.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 575 KB

english, 2013

17

Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin

Meyer, A. G., Dawson, E. T., Wilke, C. O.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 1.95 MB

english, 2013

18

Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints

Faria, N. R., Suchard, M. A., Rambaut, A., Streicker, D. G., Lemey, P.

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 537 KB

english, 2013

19

Next-generation molecular and evolutionary epidemiology of infectious disease || Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin

Austin G. Meyer, Eric T. Dawson and Claus O. Wilke

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 2.61 MB

english, 2013

20

Next-generation molecular and evolutionary epidemiology of infectious disease || The evolutionary dynamics of influenza A virus adaptation to mammalian hosts

S. Bhatt, T. T. Lam, S. J. Lycett, A. J. Leigh Brown, T. A. Bowden, E. C. Holmes, Y. Guan, J. L. N. Wood, I. H. Brown, P. Kellam, Combating Swine Influenza Consortium and O. G. Pybus

Journal:

Philosophical Transactions Biological Sciences

Year:

2013

Language:

english

File:

PDF, 3.07 MB

english, 2013