Volume 13; Issue 5

Main
PLoS Computational Biology
Volume 13; Issue 5

PLoS Computational Biology

Volume 13; Issue 5

1

Mechanisms underlying different onset patterns of focal seizures

Wang, Yujiang, Trevelyan, Andrew J, Valentin, Antonio, Alarcon, Gonzalo, Taylor, Peter N, Kaiser, Marcus, Lytton, William W

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 2.92 MB

english, 2017

2

Epidemiological modeling of Trypanosoma cruzi: Low stercorarian transmission and failure of host adaptive immunity explain the frequency of mixed infections in humans

Tomasini, Nicolás, Ragone, Paula Gabriela, Gourbière, Sébastien, Aparicio, Juan Pablo, Diosque, Patricio, Regoes, Roland R

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 3.34 MB

english, 2017

3

Single-molecule protein identification by sub-nanopore sensors

Kolmogorov, Mikhail, Kennedy, Eamonn, Dong, Zhuxin, Timp, Gregory, Pevzner, Pavel A., Dokholyan, Nikolay V.

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 5.85 MB

english, 2017

4

Transcriptomics technologies

Lowe, Rohan, Shirley, Neil, Bleackley, Mark, Dolan, Stephen, Shafee, Thomas

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 3.23 MB

english, 2017

5

ROTS: An R package for reproducibility-optimized statistical testing

Suomi, Tomi, Seyednasrollah, Fatemeh, Jaakkola, Maria K., Faux, Thomas, Elo, Laura L., Poisot, Timothée

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 3.07 MB

english, 2017

6

Ten simple rules to make the most out of your undergraduate research career

Yu, Megan, Kuo, Yu-Min

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 364 KB

english, 2017

7

Co-occurring protein phosphorylation are functionally associated

Li, Ying, Zhou, Xueya, Zhai, Zichao, Li, Tingting, Radivojac, Predrag

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 3.38 MB

english, 2017

8

phyC: Clustering cancer evolutionary trees

Matsui, Yusuke, Niida, Atsushi, Uchi, Ryutaro, Mimori, Koshi, Miyano, Satoru, Shimamura, Teppei, Markowetz, Florian

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 5.81 MB

english, 2017

9

Automatically tracking neurons in a moving and deforming brain

Nguyen, Jeffrey P., Linder, Ashley N., Plummer, George S., Shaevitz, Joshua W., Leifer, Andrew M., Dyer, Eva

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 3.57 MB

english, 2017

10

Top-down control of cortical gamma-band communication via pulvinar induced phase shifts in the alpha rhythm

Quax, Silvan, Jensen, Ole, Tiesinga, Paul, Bush, Daniel

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 2.34 MB

english, 2017

11

An agent-based model of leukocyte transendothelial migration during atherogenesis

Bhui, Rita, Hayenga, Heather N., Marsden, Alison

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 6.41 MB

english, 2017

12

A mathematical model coupling polarity signaling to cell adhesion explains diverse cell migration patterns

Holmes, William R., Park, JinSeok, Levchenko, Andre, Edelstein-Keshet, Leah, Nie, Qing

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 4.29 MB

english, 2017

13

A systems-level model reveals that 1,2-Propanediol utilization microcompartments enhance pathway flux through intermediate sequestration

Jakobson, Christopher M., Tullman-Ercek, Danielle, Slininger, Marilyn F., Mangan, Niall M., Papin, Jason A

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 3.78 MB

english, 2017

14

Short-term activity cycles impede information transmission in ant colonies

Richardson, Thomas O., Liechti, Jonas I., Stroeymeyt, Nathalie, Bonhoeffer, Sebastian, Keller, Laurent, Ayers, Joseph

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 8.72 MB

english, 2017

15

Modelling of the cancer cell cycle as a tool for rational drug development: A systems pharmacology approach to cyclotherapy

Jackson, Robert C., Di Veroli, Giovanni Y., Koh, Siang-Boon, Goldlust, Ian, Richards, Frances M., Jodrell, Duncan I., Gallo, James

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 4.49 MB

english, 2017

16

FIMTrack: An open source tracking and locomotion analysis software for small animals

Risse, Benjamin, Berh, Dimitri, Otto, Nils, Klämbt, Christian, Jiang, Xiaoyi, Poisot, Timothée

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 2.58 MB

english, 2017

17

An independent component analysis confounding factor correction framework for identifying broad impact expression quantitative trait loci

Ju, Jin Hyun, Shenoy, Sushila A., Crystal, Ronald G., Mezey, Jason G., Montgomery, Stephen B

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 2.83 MB

english, 2017

18

Uncovering direct and indirect molecular determinants of chromatin loops using a computational integrative approach

Mourad, Raphaël, Li, Lang, Cuvier, Olivier, Morozov, Alexandre V

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 3.10 MB

english, 2017

19

BacArena: Individual-based metabolic modeling of heterogeneous microbes in complex communities

Bauer, Eugen, Zimmermann, Johannes, Baldini, Federico, Thiele, Ines, Kaleta, Christoph, Maranas, Costas D.

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 8.15 MB

english, 2017

20

Predicting cryptic links in host-parasite networks

Dallas, Tad, Park, Andrew W, Drake, John M, Koella, Jacob

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 1.86 MB

english, 2017

21

Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response

MacGilvray, Matthew E., Shishkova, Evgenia, Chasman, Deborah, Place, Michael, Gitter, Anthony, Coon, Joshua J., Gasch, Audrey P., Myers, Chad L.

Journal:

PLoS Computational Biology

Year:

2018

Language:

english

File:

PDF, 3.02 MB

english, 2018

22

sourceR: Classification and source attribution of infectious agents among heterogeneous populations

Miller, Poppy, Marshall, Jonathan, French, Nigel, Jewell, Chris, Poisot, Timothée

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 6.75 MB

english, 2017