Volume 5; Issue 8

PLoS Computational Biology

Volume 5; Issue 8

1

Detection of Functional Modes in Protein Dynamics

Hub, Jochen S., de Groot, Bert L., Nussinov, Ruth

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 896 KB

english, 2009

2

A Condensation-Ordering Mechanism in Nanoparticle-Catalyzed Peptide Aggregation

Auer, Stefan, Trovato, Antonio, Vendruscolo, Michele, Hummer, Gerhard

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 929 KB

english, 2009

3

A Kinetic Model of Trp-Cage Folding from Multiple Biased Molecular Dynamics Simulations

Marinelli, Fabrizio, Pietrucci, Fabio, Laio, Alessandro, Piana, Stefano, Pande, Vijay S.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 760 KB

english, 2009

4

Microarray Comparative Genomic Hybridisation Analysis Incorporating Genomic Organisation, and Application to Enterobacterial Plant Pathogens

Pritchard, Leighton, Liu, Hui, Booth, Clare, Douglas, Emma, François, Patrice, Schrenzel, Jacques, Hedley, Peter E., Birch, Paul R. J., Toth, Ian K., Zhang, Weixiong

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 876 KB

english, 2009

5

Bioinformatics in Malaysia: Hope, Initiative, Effort, Reality, and Challenges

Zeti, Azura M. H., Shamsir, Mohd S., Tajul-Arifin, Khairina, Merican, Amir F., Mohamed, Rahmah, Nathan, Sheila, Mahadi, Nor Muhammad, Napis, Suhaimi, Tan, Tin W., Bourne, Philip E.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 83 KB

english, 2009

6

Hierarchical Modeling of Activation Mechanisms in the ABL and EGFR Kinase Domains: Thermodynamic and Mechanistic Catalysts of Kinase Activation by Cancer Mutations

Dixit, Anshuman, Verkhivker, Gennady M., Nussinov, Ruth

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.94 MB

english, 2009

7

A Parsimony Approach to Biological Pathway Reconstruction/Inference for Genomes and Metagenomes

Ye, Yuzhen, Doak, Thomas G., Ouzounis, Christos A.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 382 KB

english, 2009

8

Nash Equilibria in Multi-Agent Motor Interactions

Braun, Daniel A., Ortega, Pedro A., Wolpert, Daniel M., Friston, Karl J.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 782 KB

english, 2009

9

Can Molecular Motors Drive Distance Measurements in Injured Neurons?

Kam, Naaman, Pilpel, Yitzhak, Fainzilber, Mike, Stelling, Jorg

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.04 MB

english, 2009

10

Computation of Conformational Coupling in Allosteric Proteins

Kidd, Brian A., Baker, David, Thomas, Wendy E., Horovitz, Amnon

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 486 KB

english, 2009

11

Temporal Controls of the Asymmetric Cell Division Cycle in Caulobacter crescentus

Li, Shenghua, Brazhnik, Paul, Sobral, Bruno, Tyson, John J., Papin, Jason A.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 939 KB

english, 2009

12

Accelerated Immunodeficiency by Anti-CCR5 Treatment in HIV Infection

Weinberger, Ariel D., Perelson, Alan S., Ribeiro, Ruy M., Weinberger, Leor S., De Boer, Rob J.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 773 KB

english, 2009

13

A Mapping of Drug Space from the Viewpoint of Small Molecule Metabolism

Adams, James Corey, Keiser, Michael J., Basuino, Li, Chambers, Henry F., Lee, Deok-Sun, Wiest, Olaf G., Babbitt, Patricia C., Bourne, Philip E.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.04 MB

english, 2009

14

Accurate Prediction of DnaK-Peptide Binding via Homology Modelling and Experimental Data

Van Durme, Joost, Maurer-Stroh, Sebastian, Gallardo, Rodrigo, Wilkinson, Hannah, Rousseau, Frederic, Schymkowitz, Joost, Tramontano, Anna

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 604 KB

english, 2009

15

A Self-Organizing Algorithm for Modeling Protein Loops

Liu, Pu, Zhu, Fangqiang, Rassokhin, Dmitrii N., Agrafiotis, Dimitris K., Dunbrack, Roland

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.10 MB

english, 2009

16

Evolutionary Triplet Models of Structured RNA

Bradley, Robert K., Holmes, Ian, Stormo, Gary D.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 808 KB

english, 2009

17

Model-Based Deconvolution of Cell Cycle Time-Series Data Reveals Gene Expression Details at High Resolution

Siegal-Gaskins, Dan, Ash, Joshua N., Crosson, Sean, Bader, Joel S.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 796 KB

english, 2009

18

Temporal Variability and Social Heterogeneity in Disease Transmission: The Case of SARS in Hong Kong

Cori, Anne, Boëlle, Pierre-Yves, Thomas, Guy, Leung, Gabriel M., Valleron, Alain-Jacques, Ferguson, Neil M.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 835 KB

english, 2009

19

On the Accessibility of Adaptive Phenotypes of a Bacterial Metabolic Network

Ndifon, Wilfred, Plotkin, Joshua B., Dushoff, Jonathan, Papin, Jason A.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 463 KB

english, 2009

20

FLORA: A Novel Method to Predict Protein Function from Structure in Diverse Superfamilies

Redfern, Oliver C., Dessailly, Benoît H., Dallman, Timothy J., Sillitoe, Ian, Orengo, Christine A., Nussinov, Ruth

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 601 KB

english, 2009

21

Geometric De-noising of Protein-Protein Interaction Networks

Kuchaiev, Oleksii, Rašajski, Marija, Higham, Desmond J., Pržulj, Nataša, Przytycka, Teresa Maria

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 423 KB

english, 2009

22

A Generalized Framework for Quantifying the Dynamics of EEG Event-Related Desynchronization

Lemm, Steven, Müller, Klaus-Robert, Curio, Gabriel, Friston, Karl J.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 397 KB

english, 2009

23

Autocatalytic Loop, Amplification and Diffusion: A Mathematical and Computational Model of Cell Polarization in Neural Chemotaxis

Causin, Paola, Facchetti, Giuseppe, Asthagiri, Anand R.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 883 KB

english, 2009

24

Strong Inference for Systems Biology

Beard, Daniel A., Kushmerick, Martin J., McCulloch, Andrew D.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 208 KB

english, 2009

25

Qualia: The Geometry of Integrated Information

Balduzzi, David, Tononi, Giulio, Friston, Karl J.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.65 MB

english, 2009

26

Red Queen Dynamics with Non-Standard Fitness Interactions

Engelstädter, Jan, Bonhoeffer, Sebastian, Stormo, Gary D.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 608 KB

english, 2009

27

Four Distances between Pairs of Amino Acids Provide a Precise Description of their Interaction

Cohen, Mati, Potapov, Vladimir, Schreiber, Gideon, Nussinov, Ruth

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 646 KB

english, 2009

28

Interpreting Expression Data with Metabolic Flux Models: Predicting Mycobacterium tuberculosis Mycolic Acid Production

Colijn, Caroline, Brandes, Aaron, Zucker, Jeremy, Lun, Desmond S., Weiner, Brian, Farhat, Maha R., Cheng, Tan-Yun, Moody, D. Branch, Murray, Megan, Galagan, James E., Papin, Jason A.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.16 MB

english, 2009

29

Amyloidogenic Regions and Interaction Surfaces Overlap in Globular Proteins Related to Conformational Diseases

Castillo, Virginia, Ventura, Salvador, Nussinov, Ruth

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.57 MB

english, 2009

30

Pushing Structural Information into the Yeast Interactome by High-Throughput Protein Docking Experiments

Mosca, Roberto, Pons, Carles, Fernández-Recio, Juan, Aloy, Patrick, Levitt, Michael

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.44 MB

english, 2009

31

The Logic of EGFR/ErbB Signaling: Theoretical Properties and Analysis of High-Throughput Data

Samaga, Regina, Saez-Rodriguez, Julio, Alexopoulos, Leonidas G., Sorger, Peter K., Klamt, Steffen, Asthagiri, Anand R.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 2.19 MB

english, 2009

32

Identifying Currents in the Gene Pool for Bacterial Populations Using an Integrative Approach

Tang, Jing, Hanage, William P., Fraser, Christophe, Corander, Jukka, Bourne, Philip E.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 824 KB

english, 2009

33

Stable, Precise, and Reproducible Patterning of Bicoid and Hunchback Molecules in the Early Drosophila Embryo

Okabe-Oho, Yurie, Murakami, Hiroki, Oho, Suguru, Sasai, Masaki, Beard, Daniel A.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.11 MB

english, 2009

34

How Thioredoxin Dissociates Its Mixed Disulfide

Roos, Goedele, Foloppe, Nicolas, Van Laer, Koen, Wyns, Lode, Nilsson, Lennart, Geerlings, Paul, Messens, Joris, Böckmann, Rainer A.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.43 MB

english, 2009

35

Investigating CTL Mediated Killing with a 3D Cellular Automaton

Graw, Frederik, Regoes, Roland R., De Boer, Rob J.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 842 KB

english, 2009

36

A Quick Guide to Teaching R Programming to Computational Biology Students

Eglen, Stephen J., Lewitter, Fran

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 94 KB

english, 2009

37

The Origins of Lactase Persistence in Europe

Itan, Yuval, Powell, Adam, Beaumont, Mark A., Burger, Joachim, Thomas, Mark G., Tanaka, Mark M.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 654 KB

english, 2009

38

Towards Reproducible Descriptions of Neuronal Network Models

Nordlie, Eilen, Gewaltig, Marc-Oliver, Plesser, Hans Ekkehard, Friston, Karl J.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 831 KB

english, 2009

39

Recognizing Sequences of Sequences

Kiebel, Stefan J., von Kriegstein, Katharina, Daunizeau, Jean, Friston, Karl J., Kötter, Rolf

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 997 KB

english, 2009

To build up a library is to create a life. It’s never just a random collection of books.

— Carlos María Domínguez

Official channel

Z-Library Desktop Launcher

Tor version

Z-Library

Z-Library Since 2009 support@1delivery.pm

EnglishРусскийEspañolItalianoελληνικάاللغة العربيةBahasa IndonesiaBahasa Malaysiaहिन्दीDeutschFrançaisPortuguêsУкраїнськаPolski中文繁體中文日本語Tiếng ViệtAzərbaycan DiliՀայոց լեզուภาษาไทยTürk Diliქართველიবাংলাپښتوతెలుగుاردو한국어SrpskiБългарски