Volume 12; Issue 1

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PLoS Genetics
Volume 12; Issue 1

PLoS Genetics

Volume 12; Issue 1

1

A Comprehensive Genomic Analysis Reveals the Genetic Landscape of Mitochondrial Respiratory Chain Complex Deficiencies

Kohda, Masakazu, Tokuzawa, Yoshimi, Kishita, Yoshihito, Nyuzuki, Hiromi, Moriyama, Yohsuke, Mizuno, Yosuke, Hirata, Tomoko, Yatsuka, Yukiko, Yamashita-Sugahara, Yzumi, Nakachi, Yutaka, Kato, Hidemasa,

Journal:

Year:

2016

Language:

english

File:

PDF, 2.49 MB

english, 2016

2

Leveraging Genomic Annotations and Pleiotropic Enrichment for Improved Replication Rates in Schizophrenia GWAS

Wang, Yunpeng, Thompson, Wesley K., Schork, Andrew J., Holland, Dominic, Chen, Chi-Hua, Bettella, Francesco, Desikan, Rahul S., Li, Wen, Witoelar, Aree, Zuber, Verena, Devor, Anna, Nöthen, Markus M.,

Journal:

Year:

2016

Language:

english

File:

PDF, 1.89 MB

english, 2016

3

H-NS Facilitates Sequence Diversification of Horizontally Transferred DNAs during Their Integration in Host Chromosomes

Higashi, Koichi, Tobe, Toru, Kanai, Akinori, Uyar, Ebru, Ishikawa, Shu, Suzuki, Yutaka, Ogasawara, Naotake, Kurokawa, Ken, Oshima, Taku, El Karoui, Meriem

Journal:

Year:

2016

Language:

english

File:

PDF, 1.71 MB

english, 2016

4

Genome-Wide Analysis Reveals Novel Regulators of Growth in Drosophila melanogaster

Vonesch, Sibylle Chantal, Lamparter, David, Mackay, Trudy F. C., Bergmann, Sven, Hafen, Ernst, Barsh, Gregory S.

Journal:

Year:

2016

Language:

english

File:

PDF, 4.61 MB

english, 2016

5

Preferential Allele Expression Analysis Identifies Shared Germline and Somatic Driver Genes in Advanced Ovarian Cancer

Halabi, Najeeb M., Martinez, Alejandra, Al-Farsi, Halema, Mery, Eliane, Puydenus, Laurence, Pujol, Pascal, Khalak, Hanif G., McLurcan, Cameron, Ferron, Gwenael, Querleu, Denis, Al-Azwani, Iman, Al-Dou

Journal:

Year:

2016

Language:

english

File:

PDF, 4.02 MB

english, 2016

6

Histone H3 Variant Regulates RNA Polymerase II Transcription Termination and Dual Strand Transcription of siRNA Loci in Trypanosoma brucei

Reynolds, David, Hofmeister, Brigitte T., Cliffe, Laura, Alabady, Magdy, Siegel, T. Nicolai, Schmitz, Robert J., Sabatini, Robert, Figueiredo, Luisa

Journal:

Year:

2016

Language:

english

File:

PDF, 1.56 MB

english, 2016

7

The Polymerase Activity of Mammalian DNA Pol ζ Is Specifically Required for Cell and Embryonic Viability

Lange, Sabine S., Tomida, Junya, Boulware, Karen S., Bhetawal, Sarita, Wood, Richard D., McKinnon, Peter

Journal:

Year:

2016

Language:

english

File:

PDF, 2.35 MB

english, 2016

8

Arabidopsis ERF1 Mediates Cross-Talk between Ethylene and Auxin Biosynthesis during Primary Root Elongation by Regulating ASA1 Expression

Mao, Jie-Li, Miao, Zi-Qing, Wang, Zhen, Yu, Lin-Hui, Cai, Xiao-Teng, Xiang, Cheng-Bin, Qu, Li-Jia

Journal:

Year:

2016

Language:

english

File:

PDF, 2.30 MB

english, 2016

9

The Drosophila Helicase MLE Targets Hairpin Structures in Genomic Transcripts

Cugusi, Simona, Li, Yujing, Jin, Peng, Lucchesi, John C., Copenhaver, Gregory P.

Journal:

Year:

2016

Language:

english

File:

PDF, 5.30 MB

english, 2016

10

Base J and H3.V Regulate Transcriptional Termination in Trypanosoma brucei

Schulz, Danae, Zaringhalam, Maryam, Papavasiliou, F. Nina, Kim, Hee-Sook, Figueiredo, Luisa

Journal:

Year:

2016

Language:

english

File:

PDF, 2.08 MB

english, 2016

11

ECM-Regulator timp Is Required for Stem Cell Niche Organization and Cyst Production in the Drosophila Ovary

Pearson, John R., Zurita, Federico, Tomás-Gallardo, Laura, Díaz-Torres, Alfonsa, Díaz de la Loza, María del Carmen, Franze, Kristian, Martín-Bermudo, María D., González-Reyes, Acaimo, Desplan, Claude

Journal:

Year:

2016

Language:

english

File:

PDF, 18.72 MB

english, 2016

12

Arabidopsis Flower and Embryo Developmental Genes are Repressed in Seedlings by Different Combinations of Polycomb Group Proteins in Association with Distinct Sets of Cis-regulatory Elements

Wang, Hua, Liu, Chunmei, Cheng, Jingfei, Liu, Jian, Zhang, Lei, He, Chongsheng, Shen, Wen-Hui, Jin, Hong, Xu, Lin, Zhang, Yijing, Colot, Vincent

Journal:

Year:

2016

Language:

english

File:

PDF, 4.58 MB

english, 2016

13

Consent Codes: Upholding Standard Data Use Conditions

Dyke, Stephanie O. M., Philippakis, Anthony A., Rambla De Argila, Jordi, Paltoo, Dina N., Luetkemeier, Erin S., Knoppers, Bartha M., Brookes, Anthony J., Spalding, J. Dylan, Thompson, Mark, Roos, Marc

Journal:

Year:

2016

Language:

english

File:

PDF, 194 KB

english, 2016

14

TrpA1 Regulates Defecation of Food-Borne Pathogens under the Control of the Duox Pathway

Du, Eun Jo, Ahn, Tae Jung, Kwon, Ilmin, Lee, Ji Hye, Park, Jeong-Ho, Park, Sun Hwa, Kang, Tong Mook, Cho, Hana, Kim, Tae Jin, Kim, Hyung-Wook, Jun, Youngsoo, Lee, Hee Jae, Lee, Young Sik, Kwon, Jae Yo

Journal:

Year:

2016

Language:

english

File:

PDF, 1.64 MB

english, 2016

15

Requirement of Stat3 Signaling in the Postnatal Development of Thymic Medullary Epithelial Cells

Satoh, Rumi, Kakugawa, Kiyokazu, Yasuda, Takuwa, Yoshida, Hisahiro, Sibilia, Maria, Katsura, Yoshimoto, Levi, Ben, Abramson, Jakub, Koseki, Yoko, Koseki, Haruhiko, van Ewijk, Willem, Hollander, Georg

Journal:

Year:

2016

Language:

english

File:

PDF, 31.08 MB

english, 2016

16

Stat3 Signaling Promotes Survival And Maintenance Of Medullary Thymic Epithelial Cells

Lomada, Dakshayani, Jain, Manju, Bolner, Michelle, Reeh, Kaitlin A. G., Kang, Rhea, Reddy, Madhava C., DiGiovanni, John, Richie, Ellen R., Blackburn, C Clare

Journal:

Year:

2016

Language:

english

File:

PDF, 20.55 MB

english, 2016

17

A Functionally Conserved Gene Regulatory Network Module Governing Olfactory Neuron Diversity

Li, Qingyun, Barish, Scott, Okuwa, Sumie, Maciejewski, Abigail, Brandt, Alicia T., Reinhold, Dominik, Jones, Corbin D., Volkan, Pelin Cayirlioglu, Desplan, Claude

Journal:

Year:

2016

Language:

english

File:

PDF, 16.96 MB

english, 2016

18

Mutations of the Calcium Channel Gene cacophony Suppress Seizures in Drosophila

Saras, Arunesh, Tanouye, Mark A., Petrou, Steven

Journal:

Year:

2016

Language:

english

File:

PDF, 2.26 MB

english, 2016

19

A Sensitized Screen for Genes Promoting Invadopodia Function In Vivo: CDC-42 and Rab GDI-1 Direct Distinct Aspects of Invadopodia Formation

Lohmer, Lauren L., Clay, Matthew R., Naegeli, Kaleb M., Chi, Qiuyi, Ziel, Joshua W., Hagedorn, Elliott J., Park, Jieun E., Jayadev, Ranjay, Sherwood, David R., Chisholm, Andrew D.

Journal:

Year:

2016

Language:

english

File:

PDF, 6.83 MB

english, 2016

20

Chronic DNA Replication Stress Reduces Replicative Lifespan of Cells by TRP53-Dependent, microRNA-Assisted MCM2-7 Downregulation

Bai, Gongshi, Smolka, Marcus B., Schimenti, John C., Maizels, Nancy

Journal:

Year:

2016

Language:

english

File:

PDF, 4.35 MB

english, 2016

21

The LSH/DDM1 Homolog MUS-30 Is Required for Genome Stability, but Not for DNA Methylation in Neurospora crassa

Basenko, Evelina Y., Kamei, Masayuki, Ji, Lexiang, Schmitz, Robert J., Lewis, Zachary A., Copenhaver, Gregory P.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.74 MB

english, 2016

22

Genetic Variation, Not Cell Type of Origin, Underlies the Majority of Identifiable Regulatory Differences in iPSCs

Burrows, Courtney K., Banovich, Nicholas E., Pavlovic, Bryan J., Patterson, Kristen, Gallego Romero, Irene, Pritchard, Jonathan K., Gilad, Yoav, Gaffney, Daniel J.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.67 MB

english, 2016

23

A Glutathione-Nrf2-Thioredoxin Cross-Talk Ensures Keratinocyte Survival and Efficient Wound Repair

Telorack, Michèle, Meyer, Michael, Ingold, Irina, Conrad, Marcus, Bloch, Wilhelm, Werner, Sabine, Yuspa, Stuart H

Journal:

Year:

2016

Language:

english

File:

PDF, 10.78 MB

english, 2016

24

Correction: Human β-D-3 Exacerbates MDA5 but Suppresses TLR3 Responses to the Viral Molecular Pattern Mimic Polyinosinic:Polycytidylic Acid

Semple, Fiona, MacPherson, Heather, Webb, Sheila, Kilanowski, Fiona, Lettice, Laura, McGlasson, Sarah L., Wheeler, Ann P., Chen, Valerie, Millhauser, Glenn L., Melrose, Lauren, Davidson, Donald J., Do

Journal:

Year:

2016

Language:

english

File:

PDF, 120 KB

english, 2016

25

Quantitative Genetics Identifies Cryptic Genetic Variation Involved in the Paternal Regulation of Seed Development

Pires, Nuno D., Bemer, Marian, Müller, Lena M., Baroux, Célia, Spillane, Charles, Grossniklaus, Ueli, Gibson, Greg

Journal:

Year:

2016

Language:

english

File:

PDF, 3.09 MB

english, 2016

26

Correction: Escape from Lethal Bacterial Competition through Coupled Activation of Antibiotic Resistance and a Mobilized Subpopulation

Stubbendieck, Reed M., Straight, Paul D.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.54 MB

english, 2016

27

Correction: GDNF Overexpression from the Native Locus Reveals its Role in the Nigrostriatal Dopaminergic System Function

Kumar, Anmol, Kopra, Jaakko, Varendi, Kärt, Porokuokka, Lauriina L., Panhelainen, Anne, Kuure, Satu, Marshall, Pepin, Karalija, Nina, Härma, Mari-Anne, Vilenius, Carolina, Lilleväli, Kersti, Tekko, Tr

Journal:

Year:

2016

Language:

english

File:

PDF, 945 KB

english, 2016

28

A Novel, Noncanonical BMP Pathway Modulates Synapse Maturation at the Drosophila Neuromuscular Junction

Sulkowski, Mikolaj J., Han, Tae Hee, Ott, Carolyn, Wang, Qi, Verheyen, Esther M., Lippincott-Schwartz, Jennifer, Serpe, Mihaela, Bellen, Hugo J.

Journal:

Year:

2016

Language:

english

File:

PDF, 33.43 MB

english, 2016

29

In Vivo Analysis of Disease-Associated Point Mutations Unveils Profound Differences in mRNA Splicing of Peripherin-2 in Rod and Cone Photoreceptors

Becirovic, Elvir, Böhm, Sybille, Nguyen, Ong Nam Phuong, Riedmayr, Lisa Maria, Koch, Mirja Annika, Schulze, Elisabeth, Kohl, Susanne, Borsch, Oliver, Santos-Ferreira, Tiago, Ader, Marius, Michalakis,

Journal:

Year:

2016

Language:

english

File:

PDF, 8.15 MB

english, 2016

30

Socs36E Controls Niche Competition by Repressing MAPK Signaling in the Drosophila Testis

Amoyel, Marc, Anderson, Jason, Suisse, Annabelle, Glasner, Johanna, Bach, Erika A., Banerjee, Utpal

Journal:

Year:

2016

Language:

english

File:

PDF, 7.59 MB

english, 2016

31

Targeted Next-Generation Sequencing Identifies a Recurrent Mutation in MCPH1 Associating with Hereditary Breast Cancer Susceptibility

Mantere, Tuomo, Winqvist, Robert, Kauppila, Saila, Grip, Mervi, Jukkola-Vuorinen, Arja, Tervasmäki, Anna, Rapakko, Katrin, Pylkäs, Katri, Eng, Charis

Journal:

Year:

2016

Language:

english

File:

PDF, 1.18 MB

english, 2016

32

Post-transcriptional Control of Tumor Cell Autonomous Metastatic Potential by CCR4-NOT Deadenylase CNOT7

Faraji, Farhoud, Hu, Ying, Yang, Howard H., Lee, Maxwell P., Winkler, G. Sebastian, Hafner, Markus, Hunter, Kent W., Corbo, Laura

Journal:

Year:

2016

Language:

english

File:

PDF, 3.77 MB

english, 2016

33

Correction: fMiRNA-192 and miRNA-204 Directly Suppress lncRNA HOTTIP and Interrupt GLS1-Mediated Glutaminolysis in Hepatocellular Carcinoma

Journal:

Year:

2016

Language:

english

File:

PDF, 122 KB

english, 2016

34

Staufen1 Regulates Multiple Alternative Splicing Events either Positively or Negatively in DM1 Indicating Its Role as a Disease Modifier

Bondy-Chorney, Emma, Crawford Parks, Tara E., Ravel-Chapuis, Aymeric, Klinck, Roscoe, Rocheleau, Lynda, Pelchat, Martin, Chabot, Benoit, Jasmin, Bernard J., Côté, Jocelyn, Cox, Gregory A.

Journal:

Year:

2016

Language:

english

File:

PDF, 4.96 MB

english, 2016

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