Volume 12; Issue 8

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PLoS Genetics
Volume 12; Issue 8

PLoS Genetics

Volume 12; Issue 8

1

Reprogramming of Normal Fibroblasts into Cancer-Associated Fibroblasts by miRNAs-Mediated CCL2/VEGFA Signaling

Shen, Hua, Yu, Xiaobo, Yang, Fengming, Zhang, Zhihua, Shen, Jianxin, Sun, Jin, Choksi, Swati, Jitkaew, Siriporn, Shu, Yongqian, Augsten, Martin

Journal:

Year:

2016

Language:

english

File:

PDF, 3.88 MB

english, 2016

2

A let-7-to-miR-125 MicroRNA Switch Regulates Neuronal Integrity and Lifespan in Drosophila

Chawla, Geetanjali, Deosthale, Padmini, Childress, Sue, Wu, Yen-chi, Sokol, Nicholas S., Murphy, Coleen T.

Journal:

Year:

2016

Language:

english

File:

PDF, 10.95 MB

english, 2016

3

Developmental Functions of miR156-Regulated SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) Genes in Arabidopsis thaliana

Xu, Mingli, Hu, Tieqiang, Zhao, Jianfei, Park, Mee-Yeon, Earley, Keith W., Wu, Gang, Yang, Li, Poethig, R. Scott, Tsiantis, Miltos

Journal:

Year:

2016

Language:

english

File:

PDF, 9.75 MB

english, 2016

4

Genome-Wide Association Study Reveals Multiple Loci Influencing Normal Human Facial Morphology

Shaffer, John R., Orlova, Ekaterina, Lee, Myoung Keun, Leslie, Elizabeth J., Raffensperger, Zachary D., Heike, Carrie L., Cunningham, Michael L., Hecht, Jacqueline T., Kau, Chung How, Nidey, Nichole L

Journal:

Year:

2016

Language:

english

File:

PDF, 2.67 MB

english, 2016

5

A Genomic Map of the Effects of Linked Selection in Drosophila

Elyashiv, Eyal, Sattath, Shmuel, Hu, Tina T., Strutsovsky, Alon, McVicker, Graham, Andolfatto, Peter, Coop, Graham, Sella, Guy, Barton, Nick H.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.87 MB

english, 2016

6

Exploiting Single-Cell Quantitative Data to Map Genetic Variants Having Probabilistic Effects

Chuffart, Florent, Richard, Magali, Jost, Daniel, Burny, Claire, Duplus-Bottin, Hélène, Ohya, Yoshikazu, Yvert, Gaël, Fay, Justin C.

Journal:

Year:

2016

Language:

english

File:

PDF, 4.45 MB

english, 2016

7

Comparative Genomics of the Sigatoka Disease Complex on Banana Suggests a Link between Parallel Evolutionary Changes in Pseudocercospora fijiensis and Pseudocercospora eumusae and Increased Virulence on the Banana Host

Chang, Ti-Cheng, Salvucci, Anthony, Crous, Pedro W., Stergiopoulos, Ioannis, Hane, James K.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.48 MB

english, 2016

8

Investigating the Interplay between Sister Chromatid Cohesion and Homolog Pairing in Drosophila Nuclei

Senaratne, T. Niroshini, Joyce, Eric F., Nguyen, Son C., Wu, C.-ting, Bosco, Giovanni

Journal:

Year:

2016

Language:

english

File:

PDF, 2.88 MB

english, 2016

9

Genomewide Association Study of African Children Identifies Association of SCHIP1 and PDE8A with Facial Size and Shape

Cole, Joanne B., Manyama, Mange, Kimwaga, Emmanuel, Mathayo, Joshua, Larson, Jacinda R., Liberton, Denise K., Lukowiak, Ken, Ferrara, Tracey M., Riccardi, Sheri L., Li, Mao, Mio, Washington, Prochazko

Journal:

Year:

2016

Language:

english

File:

PDF, 6.88 MB

english, 2016

10

High Resolution Genomic Scans Reveal Genetic Architecture Controlling Alcohol Preference in Bidirectionally Selected Rat Model

Lo, Chiao-Ling, Lossie, Amy C., Liang, Tiebing, Liu, Yunlong, Xuei, Xiaoling, Lumeng, Lawrence, Zhou, Feng C., Muir, William M., Gibson, Greg

Journal:

Year:

2016

Language:

english

File:

PDF, 3.36 MB

english, 2016

11

Functional Translational Readthrough: A Systems Biology Perspective

Schueren, Fabian, Thoms, Sven, Brosius, Jürgen

Journal:

Year:

2016

Language:

english

File:

PDF, 371 KB

english, 2016

12

The Hippo Pathway Targets Rae1 to Regulate Mitosis and Organ Size and to Feed Back to Regulate Upstream Components Merlin, Hippo, and Warts

Jahanshahi, Maryam, Hsiao, Kuangfu, Jenny, Andreas, Pfleger, Cathie M., Irvine, Kenneth

Journal:

Year:

2016

Language:

english

File:

PDF, 20.52 MB

english, 2016

13

Transgenic Expression of the piRNA-Resistant Masculinizer Gene Induces Female-Specific Lethality and Partial Female-to-Male Sex Reversal in the Silkworm, Bombyx mori

Sakai, Hiroki, Sumitani, Megumi, Chikami, Yasuhiko, Yahata, Kensuke, Uchino, Keiro, Kiuchi, Takashi, Katsuma, Susumu, Aoki, Fugaku, Sezutsu, Hideki, Suzuki, Masataka G., Kopp, Artyom

Journal:

Year:

2016

Language:

english

File:

PDF, 9.23 MB

english, 2016

14

The Tumor-Associated Variant RAD51 G151D Induces a Hyper-Recombination Phenotype

Marsden, Carolyn G., Jensen, Ryan B., Zagelbaum, Jennifer, Rothenberg, Eli, Morrical, Scott W., Wallace, Susan S., Sweasy, Joann B., Maizels, Nancy

Journal:

Year:

2016

Language:

english

File:

PDF, 4.08 MB

english, 2016

15

Comparative Genomic Analyses Provide New Insights into the Evolutionary Dynamics of Heterochromatin in Drosophila

Caizzi, Ruggiero, Moschetti, Roberta, Piacentini, Lucia, Fanti, Laura, Marsano, Renè Massimiliano, Dimitri, Patrizio, Karpen, Gary H.

Journal:

Year:

2016

Language:

english

File:

PDF, 6.52 MB

english, 2016

16

Control of Oocyte Reawakening by Kit

Saatcioglu, Hatice Duygu, Cuevas, Ileana, Castrillon, Diego H., Jorgensen, Joan

Journal:

Year:

2016

Language:

english

File:

PDF, 34.66 MB

english, 2016

17

Wnt5a Signals through DVL1 to Repress Ribosomal DNA Transcription by RNA Polymerase I

Dass, Randall A., Sarshad, Aishe A., Carson, Brittany B., Feenstra, Jennifer M., Kaur, Amanpreet, Obrdlik, Ales, Parks, Matthew M., Prakash, Varsha, Love, Damon K., Pietras, Kristian, Serra, Rosa, Bla

Journal:

Year:

2016

Language:

english

File:

PDF, 13.61 MB

english, 2016

18

Phenotypic Plasticity through Transcriptional Regulation of the Evolutionary Hotspot Gene tan in Drosophila melanogaster

Gibert, Jean-Michel, Mouchel-Vielh, Emmanuèle, De Castro, Sandra, Peronnet, Frédérique, Kopp, Artyom

Journal:

Year:

2016

Language:

english

File:

PDF, 14.67 MB

english, 2016

19

Downstream Antisense Transcription Predicts Genomic Features That Define the Specific Chromatin Environment at Mammalian Promoters

Lavender, Christopher A., Cannady, Kimberly R., Hoffman, Jackson A., Trotter, Kevin W., Gilchrist, Daniel A., Bennett, Brian D., Burkholder, Adam B., Burd, Craig J., Fargo, David C., Archer, Trevor K.

Journal:

Year:

2016

Language:

english

File:

PDF, 5.50 MB

english, 2016

20

A Conserved Nuclear Cyclophilin Is Required for Both RNA Polymerase II Elongation and Co-transcriptional Splicing in Caenorhabditis elegans

Ahn, Jeong H., Rechsteiner, Andreas, Strome, Susan, Kelly, William G., Mango, Susan E.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.59 MB

english, 2016

21

Linking Core Promoter Classes to Circadian Transcription

Westermark, Pål O., Gatfield, David

Journal:

Year:

2016

Language:

english

File:

PDF, 2.05 MB

english, 2016

22

Accelerating Gene Discovery by Phenotyping Whole-Genome Sequenced Multi-mutation Strains and Using the Sequence Kernel Association Test (SKAT)

Timbers, Tiffany A., Garland, Stephanie J., Mohan, Swetha, Flibotte, Stephane, Edgley, Mark, Muncaster, Quintin, Au, Vinci, Li-Leger, Erica, Rosell, Federico I., Cai, Jerry, Rademakers, Suzanne, Janse

Journal:

Year:

2016

Language:

english

File:

PDF, 3.47 MB

english, 2016

23

Interaction with PALB2 Is Essential for Maintenance of Genomic Integrity by BRCA2

Hartford, Suzanne A., Chittela, Rajanikant, Ding, Xia, Vyas, Aradhana, Martin, Betty, Burkett, Sandra, Haines, Diana C., Southon, Eileen, Tessarollo, Lino, Sharan, Shyam K., McKinnon, Peter

Journal:

Year:

2016

Language:

english

File:

PDF, 14.95 MB

english, 2016

24

Cell-Autonomous and Non-Cell-Autonomous Regulation of a Feeding State-Dependent Chemoreceptor Gene via MEF-2 and bHLH Transcription Factors

Gruner, Matthew, Grubbs, Jeremy, McDonagh, Aja, Valdes, Dominic, Winbush, Ari, van der Linden, Alexander M., Ashrafi, Kaveh

Journal:

Year:

2016

Language:

english

File:

PDF, 5.90 MB

english, 2016

25

Whole Exome Sequencing Identifies TSC1/TSC2 Biallelic Loss as the Primary and Sufficient Driver Event for Renal Angiomyolipoma Development

Giannikou, Krinio, Malinowska, Izabela A., Pugh, Trevor J., Yan, Rachel, Tseng, Yuen-Yi, Oh, Coyin, Kim, Jaegil, Tyburczy, Magdalena E., Chekaluk, Yvonne, Liu, Yang, Alesi, Nicola, Finlay, Geraldine A

Journal:

Year:

2016

Language:

english

File:

PDF, 978 KB

english, 2016

26

p120 Catenin-Mediated Stabilization of E-Cadherin Is Essential for Primitive Endoderm Specification

Pieters, Tim, Goossens, Steven, Haenebalcke, Lieven, Andries, Vanessa, Stryjewska, Agata, De Rycke, Riet, Lemeire, Kelly, Hochepied, Tino, Huylebroeck, Danny, Berx, Geert, Stemmler, Marc P., Wirth, Da

Journal:

Year:

2016

Language:

english

File:

PDF, 23.72 MB

english, 2016

27

Identification and Functional Testing of ERCC2 Mutations in a Multi-national Cohort of Patients with Familial Breast- and Ovarian Cancer

Rump, Andreas, Benet-Pages, Anna, Schubert, Steffen, Kuhlmann, Jan Dominik, Janavičius, Ramūnas, Macháčková, Eva, Foretová, Lenka, Kleibl, Zdenek, Lhota, Filip, Zemankova, Petra, Betcheva-Krajcir, Eli

Journal:

Year:

2016

Language:

english

File:

PDF, 1.52 MB

english, 2016

28

Multiple Independent Retroelement Insertions in the Promoter of a Stress Response Gene Have Variable Molecular and Functional Effects in Drosophila

Merenciano, Miriam, Ullastres, Anna, de Cara, M. A. R., Barrón, Maite G., González, Josefa, Feschotte, Cédric

Journal:

Year:

2016

Language:

english

File:

PDF, 1.43 MB

english, 2016

29

New Entries in the Lottery of Facial GWAS Discovery

Claes, Peter, Shriver, Mark D., Barsh, Gregory S.

Journal:

Year:

2016

Language:

english

File:

PDF, 799 KB

english, 2016

30

Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078

Tang, Yong, Zhao, Chun-Yan, Tan, Shu-Tang, Xue, Hong-Wei, Qu, Li-Jia

Journal:

Year:

2016

Language:

english

File:

PDF, 3.11 MB

english, 2016

31

Correction: 3'UTR Shortening Potentiates MicroRNA-Based Repression of Pro-differentiation Genes in Proliferating Human Cells

Journal:

Year:

2016

Language:

english

File:

PDF, 96 KB

english, 2016

32

miR-71 and miR-263 Jointly Regulate Target Genes Chitin synthase and Chitinase to Control Locust Molting

Yang, Meiling, Wang, Yanli, Jiang, Feng, Song, Tianqi, Wang, Huimin, Liu, Qing, Zhang, Jie, Zhang, Jianzhen, Kang, Le, Riddiford, Lynn M

Journal:

Year:

2016

Language:

english

File:

PDF, 7.47 MB

english, 2016

33

The Impact of 18 Ancestral and Horizontally-Acquired Regulatory Proteins upon the Transcriptome and sRNA Landscape of Salmonella enterica serovar Typhimurium

Colgan, Aoife M., Kröger, Carsten, Diard, Médéric, Hardt, Wolf-Dietrich, Puente, José L., Sivasankaran, Sathesh K., Hokamp, Karsten, Hinton, Jay C. D., Casadesús, Josep

Journal:

Year:

2016

Language:

english

File:

PDF, 10.20 MB

english, 2016

34

The Non-coding Mammary Carcinoma Susceptibility Locus, Mcs5c, Regulates Pappa Expression via Age-Specific Chromatin Folding and Allele-Dependent DNA Methylation

Henning, Amanda N., Haag, Jill D., Smits, Bart M. G., Gould, Michael N., Hunter, Kent W.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.15 MB

english, 2016

35

Mg2+ Extrusion from Intestinal Epithelia by CNNM Proteins Is Essential for Gonadogenesis via AMPK-TORC1 Signaling in Caenorhabditis elegans

Ishii, Tasuku, Funato, Yosuke, Hashizume, Osamu, Yamazaki, Daisuke, Hirata, Yusuke, Nishiwaki, Kiyoji, Kono, Nozomu, Arai, Hiroyuki, Miki, Hiroaki, Lambie, Eric

Journal:

Year:

2016

Language:

english

File:

PDF, 2.63 MB

english, 2016

36

A Checkpoint-Related Function of the MCM Replicative Helicase Is Required to Avert Accumulation of RNA:DNA Hybrids during S-phase and Ensuing DSBs during G2/M

Vijayraghavan, Sriram, Tsai, Feng-Ling, Schwacha, Anthony, Jinks-Robertson, Sue

Journal:

Year:

2016

Language:

english

File:

PDF, 3.85 MB

english, 2016

37

Correction: Mek1 Down Regulates Rad51 Activity during Yeast Meiosis by Phosphorylation of Hed1

Callender, Tracy L., Laureau, Raphaelle, Wan, Lihong, Chen, Xiangyu, Sandhu, Rima, Laljee, Saif, Zhou, Sai, Suhandynata, Ray T., Prugar, Evelyn, Gaines, William A., Kwon, YoungHo, Börner, G. Valentin,

Journal:

Year:

2016

Language:

english

File:

PDF, 90 KB

english, 2016

38

KdmB, a Jumonji Histone H3 Demethylase, Regulates Genome-Wide H3K4 Trimethylation and Is Required for Normal Induction of Secondary Metabolism in Aspergillus nidulans

Gacek-Matthews, Agnieszka, Berger, Harald, Sasaki, Takahiko, Wittstein, Kathrin, Gruber, Clemens, Lewis, Zachary A., Strauss, Joseph, Stukenbrock, Eva H.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.85 MB

english, 2016

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