Volume 14; Issue 10

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PLoS Genetics
Volume 14; Issue 10

PLoS Genetics

Volume 14; Issue 10

1

Amn1 governs post-mitotic cell separation in Saccharomyces cerevisiae

Fang, Ou, Hu, Xiaohua, Wang, Lin, Jiang, Ning, Yang, Jixuan, Li, Bo, Luo, Zewei, Barsh, Gregory S.

Journal:

Year:

2018

Language:

english

File:

PDF, 10.50 MB

english, 2018

2

TIMP3 and TIMP1 are risk genes for bicuspid aortic valve and aortopathy in Turner syndrome

Corbitt, Holly, Morris, Shaine A., Gravholt, Claus H., Mortensen, Kristian H., Tippner-Hedges, Rebecca, Silberbach, Michael, Maslen, Cheryl L., Morrow, Bernice E

Journal:

Year:

2018

Language:

english

File:

PDF, 2.29 MB

english, 2018

3

A systems biology approach uncovers the core gene regulatory network governing iridophore fate choice from the neural crest

Petratou, Kleio, Subkhankulova, Tatiana, Lister, James A., Rocco, Andrea, Schwetlick, Hartmut, Kelsh, Robert N., Parichy, David M.

Journal:

Year:

2018

Language:

english

File:

PDF, 29.76 MB

english, 2018

4

Direct-to-consumer DNA testing of 6,000 dogs reveals 98.6-kb duplication associated with blue eyes and heterochromia in Siberian Huskies

Deane-Coe, Petra E., Chu, Erin T., Slavney, Andrea, Boyko, Adam R., Sams, Aaron J., Barsh, Gregory S.

Journal:

Year:

2018

Language:

english

File:

PDF, 4.83 MB

english, 2018

5

Rhinoceros beetle horn development reveals deep parallels with dung beetles

Ohde, Takahiro, Morita, Shinichi, Shigenobu, Shuji, Morita, Junko, Mizutani, Takeshi, Gotoh, Hiroki, Zinna, Robert A., Nakata, Moe, Ito, Yuta, Wada, Kenshi, Kitano, Yasuhiro, Yuzaki, Karen, Toga, Kouh

Journal:

Year:

2018

Language:

english

File:

PDF, 11.10 MB

english, 2018

6

Human genetic variation in GLS2 is associated with development of complicated Staphylococcus aureus bacteremia

Scott, William K., Medie, Felix Mba, Ruffin, Felicia, Sharma-Kuinkel, Batu K., Cyr, Derek D., Guo, Shengru, Dykxhoorn, Derek M., Skov, Robert L., Bruun, Niels E., Dahl, Anders, Lerche, Christian J., P

Journal:

Year:

2018

Language:

english

File:

PDF, 1.76 MB

english, 2018

7

FoxO6 regulates Hippo signaling and growth of the craniofacial complex

Sun, Zhao, da Fontoura, Clarissa S. G., Moreno, Myriam, Holton, Nathan E., Sweat, Mason, Sweat, Yan, Lee, Myoung Keun, Arbon, Jed, Bidlack, Felicitas B., Thedens, Daniel R., Nopoulos, Peggy, Cao, Huoj

Journal:

Year:

2018

Language:

english

File:

PDF, 31.61 MB

english, 2018

8

INDUCER OF CBF EXPRESSION 1 is a male fertility regulator impacting anther dehydration in Arabidopsis

Wei, Donghui, Liu, Mingjia, Chen, Hu, Zheng, Ye, Liu, Yuxiao, Wang, Xi, Yang, Shuhua, Zhou, Mingqi, Lin, Juan, Barsh, Gregory S.

Journal:

Year:

2018

Language:

english

File:

PDF, 17.87 MB

english, 2018

9

Reactive oxygen species mediate conical cell shaping in Arabidopsis thaliana petals

Dang, Xie, Yu, Peihang, Li, Yajun, Yang, Yanqiu, Zhang, Yu, Ren, Huibo, Chen, Binqinq, Lin, Deshu, Copenhaver, Gregory P.

Journal:

Year:

2018

Language:

english

File:

PDF, 6.64 MB

english, 2018

10

Single copy/knock-in models of ALS SOD1 in C. elegans suggest loss and gain of function have different contributions to cholinergic and glutamatergic neurodegeneration

Baskoylu, Saba N., Yersak, Jill, O’Hern, Patrick, Grosser, Sarah, Simon, Jonah, Kim, Sarah, Schuch, Kelsey, Dimitriadi, Maria, Yanagi, Katherine S., Lins, Jeremy, Hart, Anne C., Barsh, Gregory S.

Journal:

Year:

2018

Language:

english

File:

PDF, 8.84 MB

english, 2018

11

LytTR Regulatory Systems: A potential new class of prokaryotic sensory system

Zou, Zhengzhong, Qin, Hua, Brenner, Amanda E., Raghavan, Rahul, Millar, Jess A., Gu, Qiang, Xie, Zhoujie, Kreth, Jens, Merritt, Justin, Garsin, Danielle A.

Journal:

Year:

2018

Language:

english

File:

PDF, 6.95 MB

english, 2018

12

Rice transcription factor OsMADS25 modulates root growth and confers salinity tolerance via the ABA–mediated regulatory pathway and ROS scavenging

Xu, Ning, Chu, Yanli, Chen, Hongli, Li, Xingxing, Wu, Qi, Jin, Liang, Wang, Guixue, Huang, Junli, Muday, Gloria K.

Journal:

Year:

2018

Language:

english

File:

PDF, 20.98 MB

english, 2018

13

Polynucleotide phosphorylase: Not merely an RNase but a pivotal post-transcriptional regulator

Cameron, Todd A., Matz, Lisa M., De Lay, Nicholas R., Hopper, Anita K.

Journal:

Year:

2018

Language:

english

File:

PDF, 10.01 MB

english, 2018

14

Coronary artery disease genes SMAD3 and TCF21 promote opposing interactive genetic programs that regulate smooth muscle cell differentiation and disease risk

Iyer, Dharini, Zhao, Quanyi, Wirka, Robert, Naravane, Ameay, Nguyen, Trieu, Liu, Boxiang, Nagao, Manabu, Cheng, Paul, Miller, Clint L., Kim, Juyong Brian, Pjanic, Milos, Quertermous, Thomas, Rader, Da

Journal:

Year:

2018

Language:

english

File:

PDF, 4.15 MB

english, 2018

15

Antimicrobial peptides modulate long-term memory

Barajas-Azpeleta, Raquel, Wu, Jianping, Gill, Jason, Welte, Ryan, Seidel, Chris, McKinney, Sean, Dissel, Stephane, Si, Kausik, Bosco, Giovanni

Journal:

Year:

2018

Language:

english

File:

PDF, 6.89 MB

english, 2018

16

Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows

Difford, Gareth Frank, Plichta, Damian Rafal, Løvendahl, Peter, Lassen, Jan, Noel, Samantha Joan, Højberg, Ole, Wright, André-Denis G., Zhu, Zhigang, Kristensen, Lise, Nielsen, Henrik Bjørn, Guldbrand

Journal:

Year:

2018

Language:

english

File:

PDF, 2.63 MB

english, 2018

17

Interaction of the Warsaw breakage syndrome DNA helicase DDX11 with the replication fork-protection factor Timeless promotes sister chromatid cohesion

Cortone, Giuseppe, Zheng, Ge, Pensieri, Pasquale, Chiappetta, Viviana, Tatè, Rosarita, Malacaria, Eva, Pichierri, Pietro, Yu, Hongtao, Pisani, Francesca M., Symington, Lorraine S.

Journal:

Year:

2018

Language:

english

File:

PDF, 5.65 MB

english, 2018

18

Genome amplification and cellular senescence are hallmarks of human placenta development

Velicky, Philipp, Meinhardt, Gudrun, Plessl, Kerstin, Vondra, Sigrid, Weiss, Tamara, Haslinger, Peter, Lendl, Thomas, Aumayr, Karin, Mairhofer, Mario, Zhu, Xiaowei, Schütz, Birgit, Hannibal, Roberta L

Journal:

Year:

2018

Language:

english

File:

PDF, 16.75 MB

english, 2018

19

Recombination hotspots in an extended human pseudoautosomal domain predicted from double-strand break maps and characterized by sperm-based crossover analysis

Poriswanish, Nitikorn, Neumann, Rita, Wetton, Jon H., Wagstaff, John, Larmuseau, Maarten H. D., Jobling, Mark A., May, Celia A., Petukhova, Galina

Journal:

Year:

2018

Language:

english

File:

PDF, 3.08 MB

english, 2018

20

MutLγ promotes repeat expansion in a Fragile X mouse model while EXO1 is protective

Zhao, Xiaonan, Zhang, Yongwei, Wilkins, Kenneth, Edelmann, Winfried, Usdin, Karen, Maizels, Nancy

Journal:

Year:

2018

Language:

english

File:

PDF, 3.02 MB

english, 2018

21

A synonymous RET substitution enhances the oncogenic effect of an in-cis missense mutation by increasing constitutive splicing efficiency

Pecce, Valeria, Sponziello, Marialuisa, Damante, Giuseppe, Rosignolo, Francesca, Durante, Cosimo, Lamartina, Livia, Grani, Giorgio, Russo, Diego, di Gioia, Cira Rosaria, Filetti, Sebastiano, Verrienti

Journal:

Year:

2018

Language:

english

File:

PDF, 4.36 MB

english, 2018

22

ProxECAT: Proxy External Controls Association Test. A new case-control gene region association test using allele frequencies from public controls

Hendricks, Audrey E., Billups, Stephen C., Pike, Hamish N. C., Farooqi, I. Sadaf, Zeggini, Eleftheria, Santorico, Stephanie A., Barroso, Inês, Dupuis, Josée, Borecki, Ingrid

Journal:

Year:

2018

Language:

english

File:

PDF, 1.17 MB

english, 2018

23

A genome-wide Drosophila epithelial tumorigenesis screen identifies Tetraspanin 29Fb as an evolutionarily conserved suppressor of Ras-driven cancer

Zoranovic, Tamara, Manent, Jan, Willoughby, Lee, Matos de Simoes, Ricardo, La Marca, John E., Golenkina, Sofya, Cuiping, Xia, Gruber, Susanne, Angjeli, Belinda, Kanitz, Elisabeth Eva, Cronin, Shane J.

Journal:

Year:

2018

Language:

english

File:

PDF, 19.94 MB

english, 2018

24

Recovery of novel association loci in Arabidopsis thaliana and Drosophila melanogaster through leveraging INDELs association and integrated burden test

Song, Baoxing, Mott, Richard, Gan, Xiangchao, Copenhaver, Gregory P.

Journal:

Year:

2018

Language:

english

File:

PDF, 4.46 MB

english, 2018

25

A distinct strain of Arsenophonus symbiont decreases insecticide resistance in its insect host

Pang, Rui, Chen, Meng, Yue, Lei, Xing, Ke, Li, Tengchao, Kang, Kui, Liang, Zhikun, Yuan, Longyu, Zhang, Wenqing, Zhang, Jianzhi

Journal:

Year:

2018

Language:

english

File:

PDF, 5.40 MB

english, 2018

26

The Trihelix transcription factor GT2-like 1 (GTL1) promotes salicylic acid metabolism, and regulates bacterial-triggered immunity

Völz, Ronny, Kim, Soon-Kap, Mi, Jianing, Mariappan, Kiruthiga G., Guo, Xiujie, Bigeard, Jean, Alejandro, Santiago, Pflieger, Delphine, Rayapuram, Naganand, Al-Babili, Salim, Hirt, Heribert, Petersen,

Journal:

Year:

2018

Language:

english

File:

PDF, 3.01 MB

english, 2018

27

A survey of inter-individual variation in DNA methylation identifies environmentally responsive co-regulated networks of epigenetic variation in the human genome

Garg, Paras, Joshi, Ricky S., Watson, Corey, Sharp, Andrew J., Relton, Caroline

Journal:

Year:

2018

Language:

english

File:

PDF, 22.45 MB

english, 2018

28

Deleterious variation shapes the genomic landscape of introgression

Kim, Bernard Y., Huber, Christian D., Lohmueller, Kirk E., Schierup, Mikkel H.

Journal:

Year:

2018

Language:

english

File:

PDF, 10.85 MB

english, 2018

29

Filamentation of asparagine synthetase in Saccharomyces cerevisiae

Zhang, Shanshan, Ding, Kang, Shen, Qing-Ji, Zhao, Suwen, Liu, Ji-Long, Copenhaver, Gregory P.

Journal:

Year:

2018

Language:

english

File:

PDF, 16.52 MB

english, 2018

30

CXXC1 is not essential for normal DNA double-strand break formation and meiotic recombination in mouse

Tian, Hui, Billings, Timothy, Petkov, Petko M., Cohen, Paula E.

Journal:

Year:

2018

Language:

english

File:

PDF, 14.92 MB

english, 2018

31

3 minutes to precisely measure morphogen concentration

Lucas, Tanguy, Tran, Huy, Perez Romero, Carmina Angelica, Guillou, Aurélien, Fradin, Cécile, Coppey, Mathieu, Walczak, Aleksandra M., Dostatni, Nathalie, Eisen, Michael B.

Journal:

Year:

2018

Language:

english

File:

PDF, 9.95 MB

english, 2018

32

The Zn2Cys6-type transcription factor LeuB cross-links regulation of leucine biosynthesis and iron acquisition in Aspergillus fumigatus

Long, Nanbiao, Orasch, Thomas, Zhang, Shizhu, Gao, Lu, Xu, Xiaoling, Hortschansky, Peter, Ye, Jing, Zhang, Fenli, Xu, Kai, Gsaller, Fabio, Straßburger, Maria, Binder, Ulrike, Heinekamp, Thorsten, Brak

Journal:

Year:

2018

Language:

english

File:

PDF, 10.22 MB

english, 2018

33

A central role for PBP2 in the activation of peptidoglycan polymerization by the bacterial cell elongation machinery

Rohs, Patricia D. A., Buss, Jackson, Sim, Sue I., Squyres, Georgia R., Srisuknimit, Veerasak, Smith, Mandy, Cho, Hongbaek, Sjodt, Megan, Kruse, Andrew C., Garner, Ethan C., Walker, Suzanne, Kahne, Dan

Journal:

Year:

2018

Language:

english

File:

PDF, 8.87 MB

english, 2018

34

Unraveling the transcriptional regulation of TWIST1 in limb development

Hirsch, Naama, Eshel, Reut, Bar Yaacov, Reut, Shahar, Tal, Shmulevich, Fania, Dahan, Idit, Levaot, Noam, Kaplan, Tommy, Lupiáñez, Darío G., Birnbaum, Ramon Y., Nobrega, Marcelo A.

Journal:

Year:

2018

Language:

english

File:

PDF, 9.45 MB

english, 2018

35

The yeast stress inducible Ssa Hsp70 reduces α-synuclein toxicity by promoting its degradation through autophagy

Gupta, Arpit, Puri, Anuradhika, Singh, Prashant, Sonam, Surabhi, Pandey, Richa, Sharma, Deepak, Serio, Tricia R.

Journal:

Year:

2018

Language:

english

File:

PDF, 12.72 MB

english, 2018

36

Metabolic adaptations underlying genome flexibility in prokaryotes

Goyal, Akshit, Hughes, Diarmaid

Journal:

Year:

2018

Language:

english

File:

PDF, 1.18 MB

english, 2018

37

Correction: rbpms2 functions in Balbiani body architecture and ovary fate

Kaufman, Odelya H., Lee, KathyAnn, Martin, Manon, Rothhämel, Sophie, Marlow, Florence L.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.99 MB

english, 2018

38

Astrocyte expression of the Drosophila TNF-alpha homologue, Eiger, regulates sleep in flies

Vanderheyden, William M., Goodman, Alan G., Taylor, Rebecca H., Frank, Marcos G., Van Dongen, Hans P. A., Gerstner, Jason R., Schoofs, Liliane

Journal:

Year:

2018

Language:

english

File:

PDF, 948 KB

english, 2018

39

Synaptogyrin-2 influences replication of Porcine circovirus 2

Walker, Lianna R., Engle, Taylor B., Vu, Hiep, Tosky, Emily R., Nonneman, Dan J., Smith, Timothy P. L., Borza, Tudor, Burkey, Thomas E., Plastow, Graham S., Kachman, Stephen D., Ciobanu, Daniel C., Le

Journal:

Year:

2018

Language:

english

File:

PDF, 5.65 MB

english, 2018

40

Correction: A homozygous KAT2B variant modulates the clinical phenotype of ADD3 deficiency in humans and flies

Gonçalves, Sara, Patat, Julie, Guida, Maria Clara, Lachaussée, Noelle, Arrondel, Christelle, Helmstädter, Martin, Boyer, Olivia, Gribouval, Olivier, Gubler, Marie-Claire, Mollet, Geraldine, Rio, Marlè

Journal:

Year:

2018

Language:

english

File:

PDF, 1.04 MB

english, 2018

41

Heritability informed power optimization (HIPO) leads to enhanced detection of genetic associations across multiple traits

Qi, Guanghao, Chatterjee, Nilanjan, Epstein, Michael P.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.84 MB

english, 2018

42

Suppressor mutations reveal an NtrC-like response regulator, NmpR, for modulation of Type-IV Pili-dependent motility in Myxococcus xanthus

Bretl, Daniel J., Ladd, Kayla M., Atkinson, Samantha N., Müller, Susanne, Kirby, John R., Raivio, Tracy

Journal:

Year:

2018

Language:

english

File:

PDF, 2.79 MB

english, 2018

43

Quantifying how constraints limit the diversity of viable routes to adaptation

Yeaman, Sam, Gerstein, Aleeza C., Hodgins, Kathryn A., Whitlock, Michael C., Ralph, Peter L.

Journal:

Year:

2018

Language:

english

File:

PDF, 3.00 MB

english, 2018

44

A novel framework for inferring parameters of transmission from viral sequence data

Lumby, Casper K., Nene, Nuno R., Illingworth, Christopher J. R., Didelot, Xavier

Journal:

Year:

2018

Language:

english

File:

PDF, 3.49 MB

english, 2018

45

Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae

Winter, David J., Ganley, Austen R. D., Young, Carolyn A., Liachko, Ivan, Schardl, Christopher L., Dupont, Pierre-Yves, Berry, Daniel, Ram, Arvina, Scott, Barry, Cox, Murray P., Richardson, Paul M.

Journal:

Year:

2018

Language:

english

File:

PDF, 3.59 MB

english, 2018

46

Mouse genome-wide association studies and systems genetics uncover the genetic architecture associated with hepatic pharmacokinetic and pharmacodynamic properties of a constrained ethyl antisense oligonucleotide targeting Malat1

Pirie, Elaine, Ray, Shayoni, Pan, Calvin, Fu, Wuxia, Powers, Andrew F., Polikoff, Danielle, Miller, Colton M., Kudrna, Katrina M., Harris, Edward N., Lusis, Aldons J., Crooke, Rosanne M., Lee, Richard

Journal:

Year:

2018

Language:

english

File:

PDF, 3.00 MB

english, 2018

47

Identification of UHRF2 as a novel DNA interstrand crosslink sensor protein

Motnenko, Anna, Liang, Chih-Chao, Yang, Di, Lopez-Martinez, David, Yoshikawa, Yasunaga, Zhan, Bao, Ward, Katherine E., Tian, Jiayang, Haas, Wilhelm, Spingardi, Paolo, Kessler, Benedikt M., Kriaucionis

Journal:

Year:

2018

Language:

english

File:

PDF, 10.99 MB

english, 2018

48

Order of removal of conventional and nonconventional introns from nuclear transcripts of Euglena gracilis

Gumińska, Natalia, Płecha, Magdalena, Zakryś, Bożena, Milanowski, Rafał, Field, Mark C.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.62 MB

english, 2018

49

C. elegans ZHP-4 is required at multiple distinct steps in the formation of crossovers and their transition to segregation competent chiasmata

Nguyen, Hanh, Labella, Sara, Silva, Nicola, Jantsch, Verena, Zetka, Monique, Smolikove, Sarit

Journal:

Year:

2018

Language:

english

File:

PDF, 4.65 MB

english, 2018

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