Volume 5; Issue 12

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PLoS Genetics
Volume 5; Issue 12

PLoS Genetics

Volume 5; Issue 12

1

Comprehensive Functional Analysis of Mycobacterium tuberculosis Toxin-Antitoxin Systems: Implications for Pathogenesis, Stress Responses, and Evolution

Ramage, Holly R., Connolly, Lynn E., Cox, Jeffery S., Rosenberg, Susan M.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.71 MB

english, 2009

2

The Bifidobacterium dentium Bd1 Genome Sequence Reflects Its Genetic Adaptation to the Human Oral Cavity

Ventura, Marco, Turroni, Francesca, Zomer, Aldert, Foroni, Elena, Giubellini, Vanessa, Bottacini, Francesca, Canchaya, Carlos, Claesson, Marcus J., He, Fei, Mantzourani, Maria, Mulas, Laura, Ferrarini

Journal:

Year:

2009

Language:

english

File:

PDF, 1.30 MB

english, 2009

3

A Mouse Model of the Human Fragile X Syndrome I304N Mutation

Zang, Julie B., Nosyreva, Elena D., Spencer, Corinne M., Volk, Lenora J., Musunuru, Kiran, Zhong, Ru, Stone, Elizabeth F., Yuva-Paylor, Lisa A., Huber, Kimberly M., Paylor, Richard, Darnell, Jennifer

Journal:

Year:

2009

Language:

english

File:

PDF, 955 KB

english, 2009

4

Interaction of HP1 and Brg1/Brm with the Globular Domain of Histone H3 Is Required for HP1-Mediated Repression

Lavigne, Marc, Eskeland, Ragnhild, Azebi, Saliha, Saint-André, Violaine, Jang, Suk Min, Batsché, Eric, Fan, Hua-Ying, Kingston, Robert E., Imhof, Axel, Muchardt, Christian, Akhtar, Asifa

Journal:

Year:

2009

Language:

english

File:

PDF, 750 KB

english, 2009

5

Fine-Scale Variation and Genetic Determinants of Alternative Splicing across Individuals

Coulombe-Huntington, Jasmin, Lam, Kevin C. L., Dias, Christel, Majewski, Jacek, Dermitzakis, Emmanouil T.

Journal:

Year:

2009

Language:

english

File:

PDF, 385 KB

english, 2009

6

DNA Specificity Determinants Associate with Distinct Transcription Factor Functions

Hollenhorst, Peter C., Chandler, Katherine J., Poulsen, Rachel L., Johnson, W. Evan, Speck, Nancy A., Graves, Barbara J., Snyder, Michael

Journal:

Year:

2009

Language:

english

File:

PDF, 667 KB

english, 2009

7

Accelerated Evolution of the Prdm9 Speciation Gene across Diverse Metazoan Taxa

Oliver, Peter L., Goodstadt, Leo, Bayes, Joshua J., Birtle, Zoë, Roach, Kevin C., Phadnis, Nitin, Beatson, Scott A., Lunter, Gerton, Malik, Harmit S., Ponting, Chris P., Nachman, Michael W.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.65 MB

english, 2009

8

Mobile Antibiotic Resistance Encoding Elements Promote Their Own Diversity

Garriss, Geneviève, Waldor, Matthew K., Burrus, Vincent, Rosenberg, Susan M.

Journal:

Year:

2009

Language:

english

File:

PDF, 956 KB

english, 2009

9

Comparative ICE Genomics: Insights into the Evolution of the SXT/R391 Family of ICEs

Wozniak, Rachel A. F., Fouts, Derrick E., Spagnoletti, Matteo, Colombo, Mauro M., Ceccarelli, Daniela, Garriss, Geneviève, Déry, Christine, Burrus, Vincent, Waldor, Matthew K., Matic, Ivan

Journal:

Year:

2009

Language:

english

File:

PDF, 1.57 MB

english, 2009

10

Retrotransposon Silencing by piRNAs: Ping-Pong Players Mark Their Sub-Cellular Boundaries

Chuma, Shinichiro, Pillai, Ramesh S., Barsh, Gregory S.

Journal:

Year:

2009

Language:

english

File:

PDF, 173 KB

english, 2009

11

Feedback Inhibition in the PhoQ/PhoP Signaling System by a Membrane Peptide

Lippa, Andrew M., Goulian, Mark, Burkholder, William F.

Journal:

Year:

2009

Language:

english

File:

PDF, 957 KB

english, 2009

12

Cytoplasmic Compartmentalization of the Fetal piRNA Pathway in Mice

Aravin, Alexei A., van der Heijden, Godfried W., Castañeda, Julio, Vagin, Vasily V., Hannon, Gregory J., Bortvin, Alex, Barsh, Gregory S.

Journal:

Year:

2009

Language:

english

File:

PDF, 5.59 MB

english, 2009

13

The Synaptonemal Complex Protein Zip1 Promotes Bi-Orientation of Centromeres at Meiosis I

Gladstone, Mara N., Obeso, David, Chuong, Hoa, Dawson, Dean S., Hawley, R. Scott

Journal:

Year:

2009

Language:

english

File:

PDF, 1.79 MB

english, 2009

14

The Dystrophin Complex Controls BK Channel Localization and Muscle Activity in Caenorhabditis elegans

Kim, Hongkyun, Pierce-Shimomura, Jonathan T., Oh, Hyun J., Johnson, Brandon E., Goodman, Miriam B., McIntire, Steven L., Copenhaver, Gregory P.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.56 MB

english, 2009

15

Network Properties of Robust Immunity in Plants

Tsuda, Kenichi, Sato, Masanao, Stoddard, Thomas, Glazebrook, Jane, Katagiri, Fumiaki, Copenhaver, Gregory P.

Journal:

Year:

2009

Language:

english

File:

PDF, 2.25 MB

english, 2009

16

A Genome-Wide Association Study Reveals Variants in ARL15 that Influence Adiponectin Levels

Richards, J. Brent, Waterworth, Dawn, O'Rahilly, Stephen, Hivert, Marie-France, Loos, Ruth J. F., Perry, John R. B., Tanaka, Toshiko, Timpson, Nicholas John, Semple, Robert K., Soranzo, Nicole, Song,

Journal:

Year:

2009

Language:

english

File:

PDF, 661 KB

english, 2009

17

Multi-Organ Expression Profiling Uncovers a Gene Module in Coronary Artery Disease Involving Transendothelial Migration of Leukocytes and LIM Domain Binding 2: The Stockholm Atherosclerosis Gene Expression (STAGE) Study

Hägg, Sara, Skogsberg, Josefin, Lundström, Jesper, Noori, Peri, Nilsson, Roland, Zhong, Hua, Maleki, Shohreh, Shang, Ming-Mei, Brinne, Björn, Bradshaw, Maria, Bajic, Vladimir B., Samnegård, Ann, Silve

Journal:

Year:

2009

Language:

english

File:

PDF, 1.07 MB

english, 2009

18

SOS Response Induces Persistence to Fluoroquinolones in Escherichia coli

Dörr, Tobias, Lewis, Kim, Vulić, Marin, Rosenberg, Susan M.

Journal:

Year:

2009

Language:

english

File:

PDF, 372 KB

english, 2009

19

The Eureka Moment: An Interview with Sir Alec Jeffreys

Gitschier, Jane

Journal:

Year:

2009

Language:

english

File:

PDF, 182 KB

english, 2009

20

Aging Mice Show a Decreasing Correlation of Gene Expression within Genetic Modules

Southworth, Lucinda K., Owen, Art B., Kim, Stuart K., Copenhaver, Gregory P.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.09 MB

english, 2009

21

Increased Expression and Protein Divergence in Duplicate Genes Is Associated with Morphological Diversification

Hanada, Kousuke, Kuromori, Takashi, Myouga, Fumiyoshi, Toyoda, Tetsuro, Shinozaki, Kazuo, Walsh, Bruce

Journal:

Year:

2009

Language:

english

File:

PDF, 223 KB

english, 2009

22

Autoimmune Disease Classification by Inverse Association with SNP Alleles

Sirota, Marina, Schaub, Marc A., Batzoglou, Serafim, Robinson, William H., Butte, Atul J., Allison, David B.

Journal:

Year:

2009

Language:

english

File:

PDF, 410 KB

english, 2009

23

Fruit-Surface Flavonoid Accumulation in Tomato Is Controlled by a SlMYB12-Regulated Transcriptional Network

Adato, Avital, Mandel, Tali, Mintz-Oron, Shira, Venger, Ilya, Levy, Dorit, Yativ, Merav, Domínguez, Eva, Wang, Zhonghua, De Vos, Ric C. H., Jetter, Reinhard, Schreiber, Lukas, Heredia, Antonio, Rogach

Journal:

Year:

2009

Language:

english

File:

PDF, 3.37 MB

english, 2009

24

Pparγ2 Is a Key Driver of Longevity in the Mouse

Argmann, Carmen, Dobrin, Radu, Heikkinen, Sami, Auburtin, Aurélie, Pouilly, Laurent, Cock, Terrie-Anne, Koutnikova, Hana, Zhu, Jun, Schadt, Eric E., Auwerx, Johan, Barsh, Gregory S.

Journal:

Year:

2009

Language:

english

File:

PDF, 280 KB

english, 2009

25

Alternative Splicing Events Are a Late Feature of Pathology in a Mouse Model of Spinal Muscular Atrophy

Bäumer, Dirk, Lee, Sheena, Nicholson, George, Davies, Joanna L., Parkinson, Nicholas J., Murray, Lyndsay M., Gillingwater, Thomas H., Ansorge, Olaf, Davies, Kay E., Talbot, Kevin, Horwitz, Marshall S.

Journal:

Year:

2009

Language:

english

File:

PDF, 540 KB

english, 2009

26

Progressive Purkinje Cell Degeneration in tambaleante Mutant Mice Is a Consequence of a Missense Mutation in HERC1 E3 Ubiquitin Ligase

Mashimo, Tomoji, Hadjebi, Ouadah, Amair-Pinedo, Fabiola, Tsurumi, Toshiko, Langa, Francina, Serikawa, Tadao, Sotelo, Constantino, Guénet, Jean-Louis, Rosa, Jose Luis, Orr, Harry

Journal:

Year:

2009

Language:

english

File:

PDF, 850 KB

english, 2009

27

Homeobox Transcription Factors Are Required for Conidiation and Appressorium Development in the Rice Blast Fungus Magnaporthe oryzae

Kim, Seryun, Park, Sook-Young, Kim, Kyoung Su, Rho, Hee-Sool, Chi, Myoung-Hwan, Choi, Jaehyuk, Park, Jongsun, Kong, Sunghyung, Park, Jaejin, Goh, Jaeduk, Lee, Yong-Hwan, Copenhaver, Gregory P.

Journal:

Year:

2009

Language:

english

File:

PDF, 904 KB

english, 2009

28

New Evidence Confirms That the Mitochondrial Bottleneck Is Generated without Reduction of Mitochondrial DNA Content in Early Primordial Germ Cells of Mice

Cao, Liqin, Shitara, Hiroshi, Sugimoto, Michihiko, Hayashi, Jun-Ichi, Abe, Kuniya, Yonekawa, Hiromichi, Larsson, Nils-Göran

Journal:

Year:

2009

Language:

english

File:

PDF, 457 KB

english, 2009

29

Dosage Regulation of the Active X Chromosome in Human Triploid Cells

Deng, Xinxian, Nguyen, Di Kim, Hansen, R. Scott, Van Dyke, Daniel L., Gartler, Stanley M., Disteche, Christine M., Lee, Jeannie T.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.12 MB

english, 2009

30

The Origin Recognition Complex Interacts with a Subset of Metabolic Genes Tightly Linked to Origins of Replication

Shor, Erika, Warren, Christopher L., Tietjen, Joshua, Hou, Zhonggang, Müller, Ulrika, Alborelli, Ilaria, Gohard, Florence H., Yemm, Adrian I., Borisov, Lev, Broach, James R., Weinreich, Michael, Niedu

Journal:

Year:

2009

Language:

english

File:

PDF, 1017 KB

english, 2009

31

Early Evolution of Conserved Regulatory Sequences Associated with Development in Vertebrates

McEwen, Gayle K., Goode, Debbie K., Parker, Hugo J., Woolfe, Adam, Callaway, Heather, Elgar, Greg, Okada, Norihiro

Journal:

Year:

2009

Language:

english

File:

PDF, 1.66 MB

english, 2009

32

Genome-Wide Association Data Reveal a Global Map of Genetic Interactions among Protein Complexes

Hannum, Gregory, Srivas, Rohith, Guénolé, Aude, van Attikum, Haico, Krogan, Nevan J., Karp, Richard M., Ideker, Trey, Kerr, Kathleen

Journal:

Year:

2009

Language:

english

File:

PDF, 2.05 MB

english, 2009

33

A Phenotypic Profile of the Candida albicans Regulatory Network

Homann, Oliver R., Dea, Jeanselle, Noble, Suzanne M., Johnson, Alexander D., Copenhaver, Gregory P.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.96 MB

english, 2009

34

A Constant Light-Genetic Screen Identifies KISMET as a Regulator of Circadian Photoresponses

Dubruille, Raphaëlle, Murad, Alejandro, Rosbash, Michael, Emery, Patrick, Takahashi, Joseph S.

Journal:

Year:

2009

Language:

english

File:

PDF, 3.96 MB

english, 2009

35

TGF-ß Sma/Mab Signaling Mutations Uncouple Reproductive Aging from Somatic Aging

Luo, Shijing, Shaw, Wendy M., Ashraf, Jasmine, Murphy, Coleen T., Kim, Stuart K.

Journal:

Year:

2009

Language:

english

File:

PDF, 3.18 MB

english, 2009

36

Common Genetic Variation and the Control of HIV-1 in Humans

Fellay, Jacques, Ge, Dongliang, Shianna, Kevin V., Colombo, Sara, Ledergerber, Bruno, Cirulli, Elizabeth T., Urban, Thomas J., Zhang, Kunlin, Gumbs, Curtis E., Smith, Jason P., Castagna, Antonella, Co

Journal:

Year:

2009

Language:

english

File:

PDF, 1.71 MB

english, 2009

37

Severe Osteogenesis Imperfecta in Cyclophilin B–Deficient Mice

Choi, Jae Won, Sutor, Shari L., Lindquist, Lonn, Evans, Glenda L., Madden, Benjamin J., Bergen, H. Robert, Hefferan, Theresa E., Yaszemski, Michael J., Bram, Richard J., Byers, Peter H.

Journal:

Year:

2009

Language:

english

File:

PDF, 924 KB

english, 2009

38

Regulators of AWC-Mediated Olfactory Plasticity in Caenorhabditis elegans

O'Halloran, Damien M., Altshuler-Keylin, Svetlana, Lee, Jin I., L'Etoile, Noelle D., Chisholm, Andrew D.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.26 MB

english, 2009

39

Stoichiometry of Base Excision Repair Proteins Correlates with Increased Somatic CAG Instability in Striatum over Cerebellum in Huntington's Disease Transgenic Mice

Goula, Agathi-Vassiliki, Berquist, Brian R., Wilson, David M., Wheeler, Vanessa C., Trottier, Yvon, Merienne, Karine, Pearson, Christopher E.

Journal:

Year:

2009

Language:

english

File:

PDF, 2.01 MB

english, 2009

40

Epigenetic Control of Virulence Gene Expression in Pseudomonas aeruginosa by a LysR-Type Transcription Regulator

Turner, Keith H., Vallet-Gely, Isabelle, Dove, Simon L., Casadesús, Josep

Journal:

Year:

2009

Language:

english

File:

PDF, 1.39 MB

english, 2009

41

The Human Retinoblastoma Gene Is Imprinted

Kanber, Deniz, Berulava, Tea, Ammerpohl, Ole, Mitter, Diana, Richter, Julia, Siebert, Reiner, Horsthemke, Bernhard, Lohmann, Dietmar, Buiting, Karin, Stubbs, Lisa

Journal:

Year:

2009

Language:

english

File:

PDF, 660 KB

english, 2009

42

Discovery of Candidate Disease Genes in ENU–Induced Mouse Mutants by Large-Scale Sequencing, Including a Splice-Site Mutation in Nucleoredoxin

Boles, Melissa K., Wilkinson, Bonney M., Wilming, Laurens G., Liu, Bin, Probst, Frank J., Harrow, Jennifer, Grafham, Darren, Hentges, Kathryn E., Woodward, Lanette P., Maxwell, Andrea, Mitchell, Karen

Journal:

Year:

2009

Language:

english

File:

PDF, 1.18 MB

english, 2009

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