Volume 9; Issue 11

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PLoS Genetics
Volume 9; Issue 11

PLoS Genetics

Volume 9; Issue 11

1

Neuron-Specific Feeding RNAi in C. elegans and Its Use in a Screen for Essential Genes Required for GABA Neuron Function

Firnhaber, Christopher, Hammarlund, Marc, Goodman, Miriam B.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.24 MB

english, 2013

2

Interplay between Active Chromatin Marks and RNA-Directed DNA Methylation in Arabidopsis thaliana

Greenberg, Maxim V. C., Deleris, Angelique, Hale, Christopher J., Liu, Ao, Feng, Suhua, Jacobsen, Steven E., Chen, Xuemei

Journal:

Year:

2013

Language:

english

File:

PDF, 2.15 MB

english, 2013

3

Retrotransposon Silencing During Embryogenesis: Dicer Cuts in LINE

Faulkner, Geoffrey J., Bickmore, Wendy A.

Journal:

Year:

2013

Language:

english

File:

PDF, 209 KB

english, 2013

4

Demographic Divergence History of Pied Flycatcher and Collared Flycatcher Inferred from Whole-Genome Re-sequencing Data

Nadachowska-Brzyska, Krystyna, Burri, Reto, Olason, Pall I., Kawakami, Takeshi, Smeds, LinnÃ©a, Ellegren, Hans, Payseur, Bret A.

Journal:

Year:

2013

Language:

english

File:

PDF, 847 KB

english, 2013

5

Activin Signaling Targeted by Insulin/dFOXO Regulates Aging and Muscle Proteostasis in Drosophila

Bai, Hua, Kang, Ping, Hernandez, Ana Maria, Tatar, Marc, Rulifson, Eric

Journal:

Year:

2013

Language:

english

File:

PDF, 2.75 MB

english, 2013

6

DUX4 Binding to Retroelements Creates Promoters That Are Active in FSHD Muscle and Testis

Young, Janet M., Whiddon, Jennifer L., Yao, Zizhen, Kasinathan, Bhavatharini, Snider, Lauren, Geng, Linda N., Balog, Judit, Tawil, Rabi, van der Maarel, Silvère M., Tapscott, Stephen J., Feschotte, Cé

Journal:

Year:

2013

Language:

english

File:

PDF, 1.19 MB

english, 2013

7

Activin-Like Kinase 2 Functions in Peri-implantation Uterine Signaling in Mice and Humans

Clementi, Caterina, Tripurani, Swamy K., Large, Michael J., Edson, Mark A., Creighton, Chad J., Hawkins, Shannon M., Kovanci, Ertug, Kaartinen, Vesa, Lydon, John P., Pangas, Stephanie A., DeMayo, Fran

Journal:

Year:

2013

Language:

english

File:

PDF, 13.48 MB

english, 2013

8

Deletion of the Murine Cytochrome P450 Cyp2j Locus by Fused BAC-Mediated Recombination Identifies a Role for Cyp2j in the Pulmonary Vascular Response to Hypoxia

Zhou, Guo Ling, Beloiartsev, Arkadi, Yu, Binglan, Baron, David M., Zhou, Weihua, Niedra, Rasma, Lu, Naifang, Tainsh, Laurel T., Zapol, Warren M., Seed, Brian, Bloch, Kenneth D., Nobrega, Marcelo A.

Journal:

Year:

2013

Language:

english

File:

PDF, 1014 KB

english, 2013

9

MYB10 and MYB72 Are Required for Growth under Iron-Limiting Conditions

Palmer, Christine M., Hindt, Maria N., Schmidt, Holger, Clemens, Stephan, Guerinot, Mary Lou, Long, Terri A.

Journal:

Year:

2013

Language:

english

File:

PDF, 6.53 MB

english, 2013

10

Genetic and Functional Studies Implicate Synaptic Overgrowth and Ring Gland cAMP/PKA Signaling Defects in the Drosophila melanogaster Neurofibromatosis-1 Growth Deficiency

Walker, James A., Gouzi, Jean Y., Long, Jennifer B., Huang, Sidong, Maher, Robert C., Xia, Hongjing, Khalil, Kheyal, Ray, Arjun, Van Vactor, David, Bernards, René, Bernards, André, Copenhaver, Gregory

Journal:

Year:

2013

Language:

english

File:

PDF, 5.88 MB

english, 2013

11

Genomic Mechanisms Accounting for the Adaptation to Parasitism in Nematode-Trapping Fungi

Meerupati, Tejashwari, Andersson, Karl-Magnus, Friman, Eva, Kumar, Dharmendra, Tunlid, Anders, Ahrén, Dag, Richardson, Paul M.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.13 MB

english, 2013

12

Inhibition of the Smc5/6 Complex during Meiosis Perturbs Joint Molecule Formation and Resolution without Significantly Changing Crossover or Non-crossover Levels

Lilienthal, Ingrid, Kanno, Takaharu, SjÃ¶gren, Camilla, Hollingsworth, Nancy M.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.24 MB

english, 2013

13

Recruitment of TREX to the Transcription Machinery by Its Direct Binding to the Phospho-CTD of RNA Polymerase II

Meinel, Dominik M., Burkert-Kautzsch, Cornelia, Kieser, Anja, O'Duibhir, Eoghan, Siebert, Matthias, Mayer, Andreas, Cramer, Patrick, Söding, Johannes, Holstege, Frank C. P., Sträßer, Katja, Copenhaver

Journal:

Year:

2013

Language:

english

File:

PDF, 2.80 MB

english, 2013

14

The Maternal-to-Zygotic Transition Targets Actin to Promote Robustness during Morphogenesis

Zheng, Liuliu, SepÃºlveda, Leonardo A., Lua, Rhonald C., Lichtarge, Olivier, Golding, Ido, Sokac, Anna Marie, Stern, David L.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.32 MB

english, 2013

15

The Light Skin Allele of SLC24A5 in South Asians and Europeans Shares Identity by Descent

Basu Mallick, Chandana, Iliescu, Florin Mircea, MÃ¶ls, MÃ¤rt, Hill, Sarah, Tamang, Rakesh, Chaubey, Gyaneshwer, Goto, Rie, Ho, Simon Y. W., Gallego Romero, Irene, Crivellaro, Federica, Hudjashov, Geor

Journal:

Year:

2013

Language:

english

File:

PDF, 629 KB

english, 2013

16

Deletion of an X-Inactivation Boundary Disrupts Adjacent Gene Silencing

Horvath, Lindsay M., Li, Nan, Carrel, Laura, Bartolomei, Marisa S.

Journal:

Year:

2013

Language:

english

File:

PDF, 3.50 MB

english, 2013

17

Oct4 Is Required ∼E7.5 for Proliferation in the Primitive Streak

DeVeale, Brian, Brokhman, Irina, Mohseni, Paria, Babak, Tomas, Yoon, Charles, Lin, Anthony, Onishi, Kento, Tomilin, Alexey, Pevny, Larysa, Zandstra, Peter W., Nagy, Andras, van der Kooy, Derek, Downs,

Journal:

Year:

2013

Language:

english

File:

PDF, 2.32 MB

english, 2013

18

The Histone Variant His2Av is Required for Adult Stem Cell Maintenance in the Drosophila Testis

Prado, Jose Rafael Morillo, Srinivasan, Shrividhya, Fuller, Margaret T., White, Rob A. H.

Journal:

Year:

2013

Language:

english

File:

PDF, 20.39 MB

english, 2013

19

A Genetic Approach to the Recruitment of PRC2 at the HoxD Locus

Schorderet, Patrick, Lonfat, Nicolas, Darbellay, Fabrice, Tschopp, Patrick, Gitto, Sandra, Soshnikova, Natalia, Duboule, Denis, Cavalli, Giacomo

Journal:

Year:

2013

Language:

english

File:

PDF, 3.34 MB

english, 2013

20

Fine-Mapping the Genetic Association of the Major Histocompatibility Complex in Multiple Sclerosis: HLA and Non-HLA Effects

Patsopoulos, Nikolaos A., Barcellos, Lisa F., Hintzen, Rogier Q., Schaefer, Catherine, van Duijn, Cornelia M., Noble, Janelle A., Raj, Towfique, Gourraud, Pierre-Antoine, Stranger, Barbara E., Oksenbe

Journal:

Year:

2013

Language:

english

File:

PDF, 976 KB

english, 2013

21

Fission Yeast Shelterin Regulates DNA Polymerases and Rad3ATR Kinase to Limit Telomere Extension

Chang, Ya-Ting, Moser, Bettina A., Nakamura, Toru M., Lingner, Joachim

Journal:

Year:

2013

Language:

english

File:

PDF, 3.20 MB

english, 2013

22

Whole Genome, Whole Population Sequencing Reveals That Loss of Signaling Networks Is the Major Adaptive Strategy in a Constant Environment

Kvitek, Daniel J., Sherlock, Gavin, Zhang, Jianzhi

Journal:

Year:

2013

Language:

english

File:

PDF, 1.09 MB

english, 2013

23

Elevated Mutagenesis Does Not Explain the Increased Frequency of Antibiotic Resistant Mutants in Starved Aging Colonies

Katz, Sophia, Hershberg, Ruth, Malik, Harmit S.

Journal:

Year:

2013

Language:

english

File:

PDF, 532 KB

english, 2013

24

Loss of DNMT1o Disrupts Imprinted X Chromosome Inactivation and Accentuates Placental Defects in Females

McGraw, Serge, Oakes, Christopher C., Martel, Josée, Cirio, M. Cecilia, de Zeeuw, Pauline, Mak, Winifred, Plass, Christoph, Bartolomei, Marisa S., Chaillet, J. Richard, Trasler, Jacquetta M., Lee, Jea

Journal:

Year:

2013

Language:

english

File:

PDF, 4.01 MB

english, 2013

25

Removal of Misincorporated Ribonucleotides from Prokaryotic Genomes: An Unexpected Role for Nucleotide Excision Repair

Vaisman, Alexandra, McDonald, John P., Huston, Donald, Kuban, Wojciech, Liu, Lili, Van Houten, Bennett, Woodgate, Roger, Jinks-Robertson, Sue

Journal:

Year:

2013

Language:

english

File:

PDF, 2.00 MB

english, 2013

26

Molecular Recognition by a Polymorphic Cell Surface Receptor Governs Cooperative Behaviors in Bacteria

Pathak, Darshankumar T., Wei, Xueming, Dey, Arup, Wall, Daniel, Hayes, Christopher S.

Journal:

Year:

2013

Language:

english

File:

PDF, 8.89 MB

english, 2013

27

Ash1l Methylates Lys36 of Histone H3 Independently of Transcriptional Elongation to Counteract Polycomb Silencing

Miyazaki, Hitomi, Higashimoto, Ken, Yada, Yukari, Endo, Takaho A., Sharif, Jafar, Komori, Toshiharu, Matsuda, Masashi, Koseki, Yoko, Nakayama, Manabu, Soejima, Hidenobu, Handa, Hiroshi, Koseki, Haruhi

Journal:

Year:

2013

Language:

english

File:

PDF, 2.80 MB

english, 2013

28

Parallel Evolution of Chordate Cis-Regulatory Code for Development

Doglio, Laura, Goode, Debbie K., Pelleri, Maria C., Pauls, Stefan, Frabetti, Flavia, Shimeld, Sebastian M., Vavouri, Tanya, Elgar, Greg, Eisen, Michael B.

Journal:

Year:

2013

Language:

english

File:

PDF, 24.86 MB

english, 2013

29

Disruption of Drosophila melanogaster Lipid Metabolism Genes Causes Tissue Overgrowth Associated with Altered Developmental Signaling

Sasamura, Takeshi, Matsuno, Kenji, Fortini, Mark E., Bray, Sarah J.

Journal:

Year:

2013

Language:

english

File:

PDF, 9.76 MB

english, 2013

30

RNAâˆ¶DNA Hybrids Initiate Quasi-Palindrome-Associated Mutations in Highly Transcribed Yeast DNA

Kim, Nayun, Cho, Jang-Eun, Li, Yue C., Jinks-Robertson, Sue, Aguilera, AndrÃ©s

Journal:

Year:

2013

Language:

english

File:

PDF, 1.62 MB

english, 2013

31

Reconstructing the Population Genetic History of the Caribbean

Moreno-Estrada, Andrés, Gravel, Simon, Zakharia, Fouad, McCauley, Jacob L., Byrnes, Jake K., Gignoux, Christopher R., Ortiz-Tello, Patricia A., Martínez, Ricardo J., Hedges, Dale J., Morris, Richard W

Journal:

Year:

2013

Language:

english

File:

PDF, 2.74 MB

english, 2013

32

Recurrent Tissue-Specific mtDNA Mutations Are Common in Humans

Samuels, David C., Li, Chun, Li, Bingshan, Song, Zhuo, Torstenson, Eric, Boyd Clay, Hayley, Rokas, Antonis, Thornton-Wells, Tricia A., Moore, Jason H., Hughes, Tia M., Hoffman, Robert D., Haines, Jona

Journal:

Year:

2013

Language:

english

File:

PDF, 983 KB

english, 2013

33

Recombinogenic Conditions Influence Partner Choice in Spontaneous Mitotic Recombination

Cauwood, James D., Johnson, Anthony L., Widger, Alexander, Cha, Rita S., Copenhaver, Gregory P.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.25 MB

english, 2013

34

Pathways-Driven Sparse Regression Identifies Pathways and Genes Associated with High-Density Lipoprotein Cholesterol in Two Asian Cohorts

Silver, Matt, Chen, Peng, Li, Ruoying, Cheng, Ching-Yu, Wong, Tien-Yin, Tai, E-Shyong, Teo, Yik-Ying, Montana, Giovanni, Williams, Scott M.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.24 MB

english, 2013

35

Ribosome Synthesis and MAPK Activity Modulate Ionizing Radiation-Induced Germ Cell Apoptosis in Caenorhabditis elegans

Eberhard, Ralf, Stergiou, Lilli, Hofmann, E. Randal, Hofmann, Jen, Haenni, Simon, Teo, Youjin, Furger, André, Hengartner, Michael O., Garsin, Danielle A.

Journal:

Year:

2013

Language:

english

File:

PDF, 3.02 MB

english, 2013

36

A New Role for the GARP Complex in MicroRNA-Mediated Gene Regulation

Vasquez-Rifo, Alejandro, BossÃ©, Gabriel D., Rondeau, Evelyne L., Jannot, Guillaume, Dallaire, Alexandra, Simard, Martin J., Pasquinelli, Amy E.

Journal:

Year:

2013

Language:

english

File:

PDF, 3.17 MB

english, 2013

37

Translation Initiation Factors eIF3 and HCR1 Control Translation Termination and Stop Codon Read-Through in Yeast Cells

Beznosková, Petra, Cuchalová, Lucie, Wagner, Susan, Shoemaker, Christopher J., Gunišová, Stanislava, von der Haar, Tobias, Valášek, Leoš Shivaya, Hinnebusch, Alan G.

Journal:

Year:

2013

Language:

english

File:

PDF, 5.15 MB

english, 2013

38

Roles of XRCC2, RAD51B and RAD51D in RAD51-Independent SSA Recombination

Serra, Heïdi, Da Ines, Olivier, Degroote, Fabienne, Gallego, Maria E., White, Charles I., Puchta, Holger

Journal:

Year:

2013

Language:

english

File:

PDF, 2.98 MB

english, 2013

39

Contrasted Patterns of Crossover and Non-crossover at Arabidopsis thaliana Meiotic Recombination Hotspots

Drouaud, Jan, Khademian, Hossein, Giraut, Laurène, Zanni, Vanessa, Bellalou, Sarah, Henderson, Ian R., Falque, Matthieu, Mézard, Christine, Ma, Hong

Journal:

Year:

2013

Language:

english

File:

PDF, 2.06 MB

english, 2013

40

Crosstalk between NSL Histone Acetyltransferase and MLL/SET Complexes: NSL Complex Functions in Promoting Histone H3K4 Di-Methylation Activity by MLL/SET Complexes

Zhao, Xiaoming, Su, Jiaming, Wang, Fei, Liu, Da, Ding, Jian, Yang, Yang, Conaway, Joan W., Conaway, Ronald C., Cao, Lingling, Wu, Donglu, Wu, Min, Cai, Yong, Jin, Jingji, Vertino, Paula M.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.61 MB

english, 2013

41

Transposable Prophage Mu Is Organized as a Stable Chromosomal Domain of E. coli

Saha, Rudra P., Lou, Zheng, Meng, Luke, Harshey, Rasika M., Burkholder, William F.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.89 MB

english, 2013

42

RNAi-Dependent and Independent Control of LINE1 Accumulation and Mobility in Mouse Embryonic Stem Cells

Ciaudo, Constance, Jay, Florence, Okamoto, Ikuhiro, Chen, Chong-Jian, Sarazin, Alexis, Servant, Nicolas, Barillot, Emmanuel, Heard, Edith, Voinnet, Olivier, Reik, Wolf

Journal:

Year:

2013

Language:

english

File:

PDF, 1.04 MB

english, 2013

43

Decoding a Signature-Based Model of Transcription Cofactor Recruitment Dictated by Cardinal Cis-Regulatory Elements in Proximal Promoter Regions

Benner, Christopher, Konovalov, Sergiy, Mackintosh, Carlos, Hutt, Kasey R., Stunnenberg, Rieka, Garcia-Bassets, Ivan, Barsh, Gregory S.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.55 MB

english, 2013

44

Mouse BAZ1A (ACF1) Is Dispensable for Double-Strand Break Repair but Is Essential for Averting Improper Gene Expression during Spermatogenesis

Dowdle, James A., Mehta, Monika, Kass, Elizabeth M., Vuong, Bao Q., Inagaki, Akiko, Egli, Dieter, Jasin, Maria, Keeney, Scott, Schimenti, John C.

Journal:

Year:

2013

Language:

english

File:

PDF, 15.04 MB

english, 2013

45

MYB97, MYB101 and MYB120 Function as Male Factors That Control Pollen Tube-Synergid Interaction in Arabidopsis thaliana Fertilization

Liang, Yan, Tan, Ze-Min, Zhu, Lei, Niu, Qian-Kun, Zhou, Jing-Jing, Li, Meng, Chen, Li-Qun, Zhang, Xue-Qin, Ye, De, Higashiyama, Tetsuya

Journal:

Year:

2013

Language:

english

File:

PDF, 1.35 MB

english, 2013