Volume 15; Issue 10

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Protein Science
Volume 15; Issue 10

Protein Science

Volume 15; Issue 10

1

Association of putative concave protein-binding sites with the fluctuation behavior of residues

Asli Ertekin, Ruth Nussinov, Turkan Haliloglu

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 872 KB

english, 2006

2

Altered dynamics in Lck SH3 upon binding to the LBD1 domain of Herpesvirus saimiri Tip

David D. Weis, Peter Kjellen, Bartholomew M. Sefton, John R. Engen

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 476 KB

english, 2006

3

Combinatorial Domain Hunting: An effective approach for the identification of soluble protein domains adaptable to high-throughput applications

Stefanie Reich, Loretto H. Puckey, Caroline L. Cheetham, Richard Harris, Ammar A.E. Ali, Uma Bhattacharyya, Kate Maclagan, Keith A. Powell, Chrisostomos Prodromou, Laurence H. Pearl, Paul C. Driscoll,

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 556 KB

english, 2006

4

Probing protein structure and dynamics by second-derivative ultraviolet absorption analysis of cation–π interactions

Laura H. Lucas, Baran A. Ersoy, Lisa A. Kueltzo, Sangeeta B. Joshi, Duane T. Brandau, Nagarajan Thyagarajapuram, Laura J. Peek, C. Russell Middaugh

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 869 KB

english, 2006

5

Theoretical investigation of the photoinitiated folding of HP-36

Soonmin Jang, Narasimha Sreerama, Vivian H.-C. Liao, S. Hsiu-Feng Lu, Feng-Yin Li, Seokmin Shin, Robert W. Woody, Sheng Hsien Lin

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 588 KB

english, 2006

6

Molecular dynamics and in vitro analysis of Connexin43: A new 14-3-3 mode-1 interacting protein

Darren J. Park, Tracey A. Freitas, Christopher J. Wallick, Carrie V. Guyette, Bonnie J. Warn-Cramer

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 858 KB

english, 2006

7

Design and NMR conformational study of a β-sheet peptide based on Betanova and WW domains

Ana M. Fernández-Escamilla, Salvador Ventura, Luis Serrano, M. Angeles Jiménez

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 833 KB

english, 2006

8

Oligomerization behavior of the archaeal Sm2-type protein from Archaeoglobus fulgidus

Turgay Kilic, Sarah Sanglier, Alain Van Dorsselaer, Dietrich Suck

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 680 KB

english, 2006

9

Elucidation of the mechanism of the regulatory function of the Ig1 module of the fibroblast growth factor receptor 1

Vladislav V. Kiselyov, Arthur Kochoyan, Flemming M. Poulsen, Elisabeth Bock, Vladimir Berezin

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 229 KB

english, 2006

10

Methods for the accurate estimation of confidence intervals on protein folding φ-values

Ingo Ruczinski, Tobin R. Sosnick, Kevin W. Plaxco

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 290 KB

english, 2006

11

Variants of DsRed fluorescent protein: Development of a copper sensor

Pharhad Eli, Avijit Chakrabartty

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 236 KB

english, 2006

12

Characterization of the five novel Ly-6 superfamily members encoded in the MHC, and detection of cells expressing their potential ligands

Meera Mallya, R. Duncan Campbell, Begoña Aguado

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 1.05 MB

english, 2006

13

Localization of binding sites in protein structures by optimization of a composite scoring function

Andrea Rossi, Marc A. Marti-Renom, Andrej Sali

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 747 KB

english, 2006

14

Amyloid formation in denatured single-mutant lysozymes where residual structures are modulated

Tomonori Mishima, Takatoshi Ohkuri, Akira Monji, Taiji Imoto, Tadashi Ueda

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 262 KB

english, 2006

15

The origami of thioredoxin-like folds

Jonathan L. Pan, James C.A. Bardwell

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 518 KB

english, 2006

16

Three-dimensional structure and ligand interactions of the low molecular weight protein tyrosine phosphatase from Campylobacter jejuni

Dmitri Tolkatchev, Rustem Shaykhutdinov, Ping Xu, Josée Plamondon, David C. Watson, N. Martin Young, Feng Ni

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 831 KB

english, 2006

17

Active TEM-1 β-lactamase mutants with random peptides inserted in three contiguous surface loops

Pascale Mathonet, Julie Deherve, Patrice Soumillion, Jacques Fastrez

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 676 KB

english, 2006

18

Selection of allosteric β-lactamase mutants featuring an activity regulation by transition metal ions

Pascale Mathonet, Humberto Barrios, Patrice Soumillion, Jacques Fastrez

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 402 KB

english, 2006

19

Structure and function of Rv0130, a conserved hypothetical protein from Mycobacterium tuberculosis

Patrik Johansson, Alina Castell, T. Alwyn Jones, Kristina Bäckbro

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 1003 KB

english, 2006

20

NMR structure of the enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system and its interaction with GatA

Laurent Volpon, Christopher R. Young, Allan Matte, Kalle Gehring

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 368 KB

english, 2006

21

Trapping the tetrahedral intermediate in the alkaline phosphatase reaction by substitution of the active site serine with threonine

Jie Wang, Evan R. Kantrowitz

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 299 KB

english, 2006

22

Engineered zinc-binding sites confirm proximity and orientation of transmembrane helices I and III in the human serotonin transporter

Kellie J. White, Philip D. Kiser, David E. Nichols, Eric L. Barker

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 831 KB

english, 2006

23

The MRG domain of human MRG15 uses a shallow hydrophobic pocket to interact with the N-terminal region of PAM14

Peng Zhang, Jingyue Zhao, Bing Wang, Jiamu Du, Yongcheng Lu, Jiangye Chen, Jianping Ding

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 717 KB

english, 2006