Volume 52; Issue 3

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Proteins: Structure, Function, and Bioinformatics
Volume 52; Issue 3

Proteins: Structure, Function, and Bioinformatics

Volume 52; Issue 3

1

Molecular modeling studies on CNG channel from bovine retinal rod: A structural model of the cyclic nucleotide-binding domain

Marco Punta, Andrea Cavalli, Vincent Torre, Paolo Carloni

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 511 KB

english, 2003

2

Parallel tempering simulations of HP-36

Chai-Yu Lin, Chin-Kun Hu, Ulrich H. E. Hansmann

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 257 KB

english, 2003

3

Detecting distant homologs using phylogenetic tree-based HMMs

Bin Qian, Richard A. Goldstein

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 259 KB

english, 2003

4

Fold recognition, homology modeling, docking simulations, kinetics analysis and mutagenesis of ATP/CTP:tRNA nucleotidyltransferase from Methanococcus jannaschii

Janusz M. Bujnicki, Megan A. Albert, Donald J. Nelson, David L. Thurlow

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 1017 KB

english, 2003

5

Nonequilibrium, multiple-timescale simulations of ligand-receptor interactions in structured protein systems

Ying Zhang, Michael H. Peters, Yaohang Li

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 275 KB

english, 2003

6

Atoms-in-molecules study of the genetically encoded amino acids. III. Bond and atomic properties and their correlations with experiment including mutation-induced changes in protein stability and genetic coding

Chérif F. Matta, Richard F. W. Bader

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 592 KB

english, 2003

7

A template search reveals mechanistic similarities and differences in β-ketoacyl synthases (KAS) and related enzymes

Jennifer H. Dawe, Craig T. Porter, Janet M. Thornton, Alethea B. Tabor

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 270 KB

english, 2003

8

A consensus-binding structure for adenine at the atomic level permits searching for the ligand site in a wide spectrum of adenine-containing complexes

Yosef Y. Kuttner, Vladimir Sobolev, Alexander Raskind, Marvin Edelman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 192 KB

english, 2003

9

Deciphering a novel thioredoxin-like fold family

Lisa N. Kinch, David Baker, Nick V. Grishin

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 970 KB

english, 2003

10

Characterization of sequence variability in nucleosome core histone folds

Steven A. Sullivan, David Landsman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 229 KB

english, 2003

11

Crystal structures of MTH1187 and its yeast ortholog YBL001c

Xiao Tao, Reza Khayat, Dinesh Christendat, Alexei Savchenko, Xiaohui Xu, Sharon Goldsmith-Fischman, Barry Honig, Aled Edwards, Cheryl H. Arrowsmith, Liang Tong

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 190 KB

english, 2003

12

Exploring the origin of the ion selectivity of the KcsA potassium channel

Anton Burykin, Mitsunori Kato, Arieh Warshel

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 1.01 MB

english, 2003

13

Comparative analysis of structural properties of the C-type-lectin-like domain (CTLD)

Alex N. Zelensky, Jill E. Gready

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 1.16 MB

english, 2003