Volume 53; Issue 3

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Proteins: Structure, Function, and Bioinformatics
Volume 53; Issue 3

Proteins: Structure, Function, and Bioinformatics

Volume 53; Issue 3

1

Unfolding of the cold shock protein studied with biased molecular dynamics

Giulia Morra, Milan Hodoscek, Ernst-Walter Knapp

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 365 KB

english, 2003

2

Fluorescent dyes as probes to study lipid-binding proteins

Alexander V. Pastukhov, Ira J. Ropson

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 153 KB

english, 2003

3

Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7 Å resolution

Azusa Seto, Mikako Shirouzu, Takaho Terada, Kazutaka Murayama, Seiki Kuramitsu, Shigeyuki Yokoyama

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 211 KB

english, 2003

4

Importance of sequence specificity for predicting protein folding pathways: Perturbed Gaussian chain model

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 782 KB

english, 2003

5

Atomic contact vectors in protein-protein recognition

Julian Mintseris, Zhiping Weng

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 426 KB

english, 2003

6

Crystal structure of UDP-N-acetylglucosamine acyltransferase fromHelicobacter pylori

Byung Il Lee, Se Won Suh

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 133 KB

english, 2003

7

The tissue factor/factor VIIa/factor Xa complex: A model built by docking and site-directed mutagenesis

Brian V. Norledge, Ramona J. Petrovan, Wolfram Ruf, Arthur J. Olson

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 323 KB

english, 2003

8

Automatic annotation of protein function based on family identification

Federico Abascal, Alfonso Valencia

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 133 KB

english, 2003

9

Characterization of the active site of DNA polymerase β by molecular dynamics and quantum chemical calculation

Robert C. Rittenhouse, Wlodzimierz K. Apostoluk, John H. Miller, T. P. Straatsma

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 763 KB

english, 2003

10

A second binding site revealed by C-terminal truncation of calpain small subunit, a penta-EF-hand protein

E.K. Leinala, J.S.C. Arthur, P. Grochulski, P.L. Davies, J.S. Elce, Z. Jia

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 331 KB

english, 2003

11

The importance of explicit chain representation in protein folding models: An examination of ising-like models

John Karanicolas, Charles L. Brooks III

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 338 KB

english, 2003

12

RDOCK: Refinement of rigid-body protein docking predictions

Li Li, Rong Chen, Zhiping Weng

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 641 KB

english, 2003

13

Dissecting subunit interfaces in homodimeric proteins

Ranjit Prasad Bahadur, Pinak Chakrabarti, Francis Rodier, Joël Janin

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 322 KB

english, 2003

14

Elucidation of the disulfide-folding pathway of hirudin by a topology-based approach

C. Micheletti, V. De Filippis, A. Maritan, F. Seno

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 200 KB

english, 2003

15

Many residues in cytochrome c populate alternative states under equilibrium conditions

Michael P. Williamson

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 183 KB

english, 2003

16

The intracellular domain of the Drosophila cholinesterase-like neural adhesion protein, gliotactin, is natively unfolded

Tzviya Zeev-Ben-Mordehai, Edwin H. Rydberg, Ariel Solomon, Lilly Toker, Vanessa J. Auld, Israel Silman, Simone Botti, Joel L. Sussman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 599 KB

english, 2003

17

Accessibility of oxygen with respect to the heme pocket in horseradish peroxidase

Mazdak Khajehpour, Ivo Rietveld, Sergei Vinogradov, Ninad V. Prabhu, Kim A. Sharp, Jane M. Vanderkooi

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 260 KB

english, 2003

18

Three-dimensional structural location and molecular functional effects of missense SNPs in the T cell receptor Vβ domain

Zhen Wang, John Moult

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 322 KB

english, 2003