Volume 14; Issue 23-24

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PROTEOMICS
Volume 14; Issue 23-24

PROTEOMICS

Volume 14; Issue 23-24

1

Leveraging the complementary nature of RNA-Seq and shotgun proteomics data

Wang, Xiaojing, Liu, Qi, Zhang, Bing

Journal:

Year:

2014

Language:

english

File:

PDF, 909 KB

english, 2014

2

The proteome under translational control

Gawron, Daria, Gevaert, Kris, Van Damme, Petra

Journal:

Year:

2014

Language:

english

File:

PDF, 1.17 MB

english, 2014

3

A proteogenomics approach integrating proteomics and ribosome profiling increases the efficiency of protein identification and enables the discovery of alternative translation start sites

Koch, Alexander, Gawron, Daria, Steyaert, Sandra, Ndah, Elvis, Crappé, Jeroen, De Keulenaer, Sarah, De Meester, Ellen, Ma, Ming, Shen, Ben, Gevaert, Kris, Van Criekinge, Wim, Van Damme, Petra, Menscha

Journal:

Year:

2014

Language:

english

File:

PDF, 1.29 MB

english, 2014

4

High-throughput parallel proteogenomics: A bacterial case study

Chapman, Brett, Bellgard, Matthew

Journal:

Year:

2014

Language:

english

File:

PDF, 1.65 MB

english, 2014

5

Proteomic analysis and genome annotation of Pichia pastoris , a recombinant protein expression host

Renuse, Santosh, Madugundu, Anil K., Kumar, Praveen, Nair, Bipin G., Gowda, Harsha, Prasad, T. S. Keshava, Pandey, Akhilesh

Journal:

Year:

2014

Language:

english

File:

PDF, 728 KB

english, 2014

6

Linking cancer genome to proteome: NCI's investment into proteogenomics

Rivers, Robert C., Kinsinger, Christopher, Boja, Emily S., Hiltke, Tara, Mesri, Mehdi, Rodriguez, Henry

Journal:

Year:

2014

Language:

english

File:

PDF, 86 KB

english, 2014

7

Proteogenomic strategies for identification of aberrant cancer peptides using large-scale next-generation sequencing data

Woo, Sunghee, Cha, Seong Won, Na, Seungjin, Guest, Clark, Liu, Tao, Smith, Richard D., Rodland, Karin D., Payne, Samuel, Bafna, Vineet

Journal:

Year:

2014

Language:

english

File:

PDF, 1.41 MB

english, 2014

8

Revisiting the identification of canonical splice isoforms through integration of functional genomics and proteomics evidence

Li, Hong-Dong, Menon, Rajasree, Omenn, Gilbert S., Guan, Yuanfang

Journal:

Year:

2014

Language:

english

File:

PDF, 450 KB

english, 2014

9

Integration of mass spectrometry and RNA-Seq data to confirm human ab initio predicted genes and lncRNAs

Sun, Han, Chen, Chen, Shi, Meng, Wang, Dandan, Liu, Mingwei, Li, Daixi, Yang, Pengyuan, Li, Yixue, Xie, Lu

Journal:

Year:

2014

Language:

english

File:

PDF, 889 KB

english, 2014

10

N-terminomics and proteogenomics, getting off to a good start

Hartmann, Erica M., Armengaud, Jean

Journal:

Year:

2014

Language:

english

File:

PDF, 431 KB

english, 2014

11

Construction and assessment of individualized proteogenomic databases for large-scale analysis of nonsynonymous single nucleotide variants

Krug, Karsten, Popic, Sasa, Carpy, Alejandro, Taumer, Christoph, Macek, Boris

Journal:

Year:

2014

Language:

english

File:

PDF, 742 KB

english, 2014

12

Cover Picture: Proteomics 23-24'14

Journal:

Year:

2014

File:

PDF, 181 KB

2014

13

ProteoAnnotator - Open source proteogenomics annotation software supporting PSI standards

Ghali, Fawaz, Krishna, Ritesh, Perkins, Simon, Collins, Andrew, Xia, Dong, Wastling, Jonathan, Jones, Andrew R.

Journal:

Year:

2014

Language:

english

File:

PDF, 779 KB

english, 2014

14

Proteogenomics

Journal:

Year:

2014

Language:

english

File:

PDF, 198 KB

english, 2014

15

Proteomic signatures associated with p53 mutational status in lung adenocarcinoma

Taguchi, Ayumu, Delgado, Oliver, Çeliktaş, Müge, Katayama, Hiroyuki, Wang, Hong, Gazdar, Adi F., Hanash, Samir M.

Journal:

Year:

2014

Language:

english

File:

PDF, 700 KB

english, 2014

16

Compact variant-rich customized sequence database and a fast and sensitive database search for efficient proteogenomic analyses

Park, Heejin, Bae, Junwoo, Kim, Hyunwoo, Kim, Sangok, Kim, Hokeun, Mun, Dong-Gi, Joh, Yoonsung, Lee, Wonyeop, Chae, Sehyun, Lee, Sanghyuk, Kim, Hark Kyun, Hwang, Daehee, Lee, Sang-Won, Paek, Eunok

Journal:

Year:

2014

Language:

english

File:

PDF, 776 KB

english, 2014

17

Proteogenomics in microbiology: Taking the right turn at the junction of genomics and proteomics

Kucharova, Veronika, Wiker, Harald G.

Journal:

Year:

2014

Language:

english

File:

PDF, 436 KB

english, 2014

18

Discovery of rare protein-coding genes in model methylotroph Methylobacterium extorquens AM1

Kumar, Dhirendra, Mondal, Anupam Kumar, Yadav, Amit Kumar, Dash, Debasis

Journal:

Year:

2014

Language:

english

File:

PDF, 714 KB

english, 2014

19

Contents: Proteomics 23-24'14

Journal:

Year:

2014

Language:

english

File:

PDF, 493 KB

english, 2014

20

9 Standard abbreviations

Journal:

Year:

2014

Language:

english

File:

PDF, 53 KB

english, 2014

21

Editorial Board: Proteomics 23-24'14

Journal:

Year:

2014

Language:

english

File:

PDF, 131 KB

english, 2014