Volume 44; Issue supplement

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Seibutsu Butsuri
Volume 44; Issue supplement

Seibutsu Butsuri

Volume 44; Issue supplement

1

2P219 Silicon nanoparticles : Application to imaging the motion of single molecules in live cell membranes

Ritchie, Ken, Goto, Miki, Nishimura, Hirohito, Kusumi, Akihiro

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Seibutsu Butsuri

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2004

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2004

2

10.2142/biophys.44._s10_

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Seibutsu Butsuri

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2004

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3

10.2142/biophys.44._s1_

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Seibutsu Butsuri

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2004

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2004

4

10.2142/biophys.44._s5_

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Seibutsu Butsuri

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2004

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5

10.2142/biophys.44.app17

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Seibutsu Butsuri

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2004

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6

1P283 Photocycle of photoactive yellow protein studied by microsecond-millisecond spectroscopy

Imamoto, Y., Kataoka, M.

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Seibutsu Butsuri

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2004

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2004

7

1P284 The role of PYP domain in Ppr(PYP-Phytochrome Related Protein)

Hayashi, M., Kamikubo, H., Shirai, K., Yamazaki, Y., Imamoto, Y., Kataoka, M.

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Seibutsu Butsuri

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2004

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PDF, 240 KB

2004

8

1P285 Synthesis and characterization of PYP chromophore model compound containing a Cys residue

Okamoto, K., Yamamoto, H., Sumi, T., Okamura, T., Ueyama, N.

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Seibutsu Butsuri

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2004

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2004

9

1P288 A nobel method to calculate the excited state of protein

Kawaguchi, K., Yamato, T.

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Seibutsu Butsuri

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2004

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2004

10

1P290 Identification of interaction molecule with PYP from Rhodobacter capsulatus

Yamazaki, Y., Kamikubo, H., Imamoto, Y., Kataoka, M.

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Seibutsu Butsuri

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2004

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2004

11

1P291 Phototaxis and photoreceptor protein of purple nonsulfer bacterium

Mawatari, R., Saeki, K., Hisatomi, O., Tokunaga, F.

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Seibutsu Butsuri

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2004

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PDF, 252 KB

2004

12

1P293 Computer Simulation of Cooperative Movement of Bacteria in Colony Pattern Formation

Ueno, Y., Morikawa, R., Hayashi, M.

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Seibutsu Butsuri

Year:

2004

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2004

13

1P294 Strategies of amoebic motion

Nishimura, S.I., Sasai, M.

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Seibutsu Butsuri

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2004

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2004

14

1P295 Self-organization of an envelope of cell layer from a cell aggregate

Honda, H., Nagai, T., Tanemura, M.

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Seibutsu Butsuri

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2004

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15

1P296 Functions realized by some soft gears system

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Seibutsu Butsuri

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2004

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16

1P299 Selection of initial conditions for recursive production of multicellular organisms

Yoshida, H., Furusawa, C., Kaneko, K.

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Seibutsu Butsuri

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2004

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2004

17

1P303 Stoichiometric interactions between cyanobacterial clock proteins KaiA and KaiC

Hayashi, F., Ito, H., Fujita, M., Iwase, R., Uzumaki, T., Ishiura, M.

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Seibutsu Butsuri

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2004

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2004

18

1P309 Effects of cellular interaction on cell dynamics

Ohnuma, K., Furue, M., Asashima, M., Kaneko, K.

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Seibutsu Butsuri

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2004

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2004

19

1P312 Analysis of fluctuation on gene expression in uniform environment

Yamada, T., Sadamitsu, M., nagahisa, K., Furusawa, C., Shimizu, H.

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Seibutsu Butsuri

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2004

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2004

20

1P313 Decision making to competitive stimulation of attractant and repellent by physarum polycephalum

Takagi, S., Ueda, T.

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Seibutsu Butsuri

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2004

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2004

21

1P316 Distortion of inside of crystal due to temperature change and impurities on crystallization of protein

Kunita, M., Sakurazawa, S.

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Seibutsu Butsuri

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2004

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2004

22

1P317 High-quality protein crystal growth by magneto-Archimedes levitation

Maki, S., Ataka, M.

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Seibutsu Butsuri

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2004

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2004

23

1P319 Crystallization mechanism of bitter gourd trypsin inhibitor II : The influence of intramolecular fluctuational motions

Takahashi, D., Nishimoto, E., Shinkai, A., Yamashita, S.

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Seibutsu Butsuri

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2004

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2004

24

1SB54 Water molecules bound to proteins determined by neutron diffraction experiment

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Seibutsu Butsuri

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2004

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25

2P001 Crystal structure of tryptophan synthase α_2β_2complex from hyperthermophile

Lee, S.J., Ogasahara, K., Ma, J., Nishio, K., Ishida, M., Yamagata, Y., Tsukihara, T., Yutani, K.

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Seibutsu Butsuri

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2004

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2004

26

2P002 Structural basis for the recognition of a nuclear export cargo (Kap60p) by an exportin (Cselp) and RanGTP

Matsuura, Y., Stewart, Murray

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Seibutsu Butsuri

Year:

2004

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2004

27

2P005 Crystal structure of heme binding protein P46 from Bacteroides fragilis

Izumi, A., Otto, Ben, Heddle, Jonathan, Park, S.Y., Tame, Jeremy R.H.

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Seibutsu Butsuri

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2004

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PDF, 250 KB

2004

28

2P006 Neutron Structure analysis of Human Hemoglobin

Morimoto, Y., Park, S.Y., Shibayama, N., Kurihara, K., Tanaka, I., Tamada, T., Kuroki, R., Niimura, N.

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Seibutsu Butsuri

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2004

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2004

29

2P007 Crystallographic study of Hyp proteins for [NiFe]-hydrogenase maturation

Watanabe, S., Matumi, R., Kita, A., Atomi, H., Imanaka, T., Miki, K.

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Seibutsu Butsuri

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2004

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2004

30

2P011 Crystal structure of 4-oxalocrotonate tautomerase from Thermus thermophilus HB8

Kida, H., Kita, A., Miki, K.

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Seibutsu Butsuri

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2004

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2004

31

2P012 Crystal structure of ATP-binding domain of amino acid transporter from Thermus thermophilus HB8

Akiyama, N., Kita, A., Miki, K.

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Seibutsu Butsuri

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2004

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2004

32

2P013 X-ray crystal structure analysis of Tip, novel protein secreted by H.pylori

Tsurumura, T., Suganuma, M., Katunuma, N., Tsuge, H.

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Seibutsu Butsuri

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2004

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2004

33

2P014 Crystal structures of two isozymes of citrate synthase from Sulfolobus tokodaii

Murakami, M., Ihara, K., Kouyama, T.

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Seibutsu Butsuri

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2004

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2004

34

2P015 Structural analysis of protein by using distance geometry method in aqueous solution

Yamane, T., Ikeguchi, M., Kidera, A., Okamura, H., Nishimura, Y.

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Seibutsu Butsuri

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2004

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2004

35

2P016 Structure analysis of fungal protease inhibitor from silkworm by NMR

Kanaori, K., Nakaishi, M., Taniguchi, M., Kamei, K.

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Seibutsu Butsuri

Year:

2004

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2004

36

2P019 Structural analysis of G protein by solid state NMR

Omichi, H., Todokoro, Y., Wakamatsu, K., Fujiwara, T., Akutsu, H.

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Seibutsu Butsuri

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2004

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2004

37

2P020 Secondary Structural Analysis of H^+-ATP Synthase Subunit c by High-Resolution Solid-State NMR

Kobayashi, M., Matsuki, Y., Fujiwara, T., Akutsu, H.

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Seibutsu Butsuri

Year:

2004

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2004

38

2P022 Amyloid fibril structure proposed from IR-microscope linear dichroism

Hiramatsu, H., Goto, Y., Naiki, H., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

39

2P023 The structure of the interaction part of the amyloid fibril of beta 2 microglobulin elucidated by IR microscope

Lu, M., Hiramatsu, H., Goto, Y., Naiki, H., Kitagawa, T.

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Seibutsu Butsuri

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2004

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2004

40

2P029 Application of single particle methods into electron crystallographic analysis

Shiokawa, K., Tahara, Y., Hayashi, Y., Tani, K., Fujiyoshi, Y.

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Seibutsu Butsuri

Year:

2004

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2004

41

2P030 Massive parallel calculation of single particle analaysis for membrane proteins

Kawata, M., Sato, T.

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Seibutsu Butsuri

Year:

2004

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2004

42

2P031 Exploring protein-segment conformational space

Ikeda, K., Tomii, K., Higo, J.

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Seibutsu Butsuri

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2004

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2004

43

2P034 Analysis of Folding of beta-Sandwich Proteins Based on the Contact Maps Derived from the Statistics of Interresidue Average Distances

Ishizuka, Y., Kikuchi, T.

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Seibutsu Butsuri

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2004

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2004

44

2P035 How effective for fold recognition is a potential of mean force for relative orientation between contacting residues in proteins?

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Seibutsu Butsuri

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2004

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2004

45

2P036 Classification of protein structures by Delauney tetrahedron codes

Teramoto, Y., katto, J., Wako, H.

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Seibutsu Butsuri

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2004

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2004

46

2P038 Development of protein structure prediction system "IDDD/ABLE"

Nakamura, S., Ishida, T., Kobayashi, T., Terada, T., Shimizu, K.

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Seibutsu Butsuri

Year:

2004

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2004

47

2P039 Search among structual space for protein with Wang-Langau MD

Nagasima, T., Mitsui, T., Kinjo, A., Nishikawa, K.

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Seibutsu Butsuri

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2004

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2004

48

2P040 Prediction of protein disordered region from amino acid sequences

Ishida, T., Terada, T., Nakamura, S., Shimizu, K.

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Seibutsu Butsuri

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2004

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2004

49

1SC52 Synchronous neural activities in the olfactory center of a terrestrial mollusk

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Seibutsu Butsuri

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2004

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50

1SC53 Single-neuron analysis for change in expression level of CREB genes during associative learning in pond snail

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Seibutsu Butsuri

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2004

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51

1SC54 Synaptic plasticity and cognitive function linked by theta rhythm in rats

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Seibutsu Butsuri

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2004

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2004

52

2P041 Extension of the method of Fragment Assenbly for membrane proteins

Miki, T., Hujitsuka, Y., Takada, S.

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Seibutsu Butsuri

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2004

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2004

53

2P042 A study of fragment selection for fragment assembly method predicting protein tertiary structures

Park, S.J., Chikenji, G., Fujitsuka, Y., Takada, S.

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Seibutsu Butsuri

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2004

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2004

54

2P044 Fast numerical calculation of molecular surface area, volume and solvation free energy

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Seibutsu Butsuri

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2004

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2004

55

2P045 Detection of Chaotic Aspects in Structural Quantities for Globular Proteins

Kubota, Y., Tsuchiya, T.

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Seibutsu Butsuri

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2004

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PDF, 240 KB

2004

56

2P046 Folding Simulation of a WW domain

Satoh, D., Terada, T., Nakamura, S., Shimizu, K.

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Seibutsu Butsuri

Year:

2004

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2004

57

2P049 Molecular dynamics simulation on Prion Protein: effect of P102L mutation

Sekijima, M., Motono, C., Noguchi, T., Kaneko, K., Akiyama, Y.

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Seibutsu Butsuri

Year:

2004

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2004

58

2P050 Analysis of the transition pathway from the L to M intermediate of Photoactive Yellow Protein based on Multicanonical MD simulation

Arai, S., Gao, Q., kamiya, N., Higo, J., Sakurai, M.

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Seibutsu Butsuri

Year:

2004

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2004

59

2P052 Development of the semi-flexible docking tool and application to the docking between PPARgamma and coactivator peptide

Kamiya, N., Shiraki, T., Kodama, T.S., Jingami, H.

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Seibutsu Butsuri

Year:

2004

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2004

60

2P054 Verification of pressure reversal hypothesis by docking simulation : Anesthetics interact with protein, and squeeze out of it by pressure

Isogai, H., Seto, T., Nosaka, S.

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Seibutsu Butsuri

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2004

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2004

61

2P055 Structural analysis of drug binging site on human serum albumin by molecular dynamics simulations

Fujiwara, S., Amisaki, T.

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Seibutsu Butsuri

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2004

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2004

62

2P057 Replica exchange molecular dynamics simulation of protein in diffracted X-ray tracking

Kawashima, Y., Okamoto, Y.

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Seibutsu Butsuri

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2004

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2004

63

2P060 Crystal structure of TilS : implications for reaction mechanism

Nakanishi, K., Fukai, S., Ikeuchi, Y., Soma, A., Suzuki, T., Nureki, O.

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Seibutsu Butsuri

Year:

2004

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2004

64

2P061 Characterization of SOUL in Mouse Eyes : Optical Absorption, Resonance Raman Spectral and Heme Binding Properties

Sagami, I., Sato, E., Uchida, T., Sato, A., Kitagawa, T., Igarashi, J., Shimizu, T.

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Seibutsu Butsuri

Year:

2004

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2004

65

2P062 Heme Binding Affinity of Iron Response Regulator (Irr) and its Regulation Mechanism

Nakagaki, M., Bamba, A., Ishikawa, H., Iwai, K., O'Brian, Mark, Morishima, I., Is, K.

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Seibutsu Butsuri

Year:

2004

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2004

66

2P063 Spectroscopic Characterization of Heme Binding and Coordination Structure in Iron Regulatory Protein 2(IRP2)

Endo, R., Ishikawa, H., Iwai, K., Morishima, I., Ishimori, K.

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Seibutsu Butsuri

Year:

2004

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2004

67

2P064 Redox-controlled conformational change of heme PAS sensor

Kobayashi, K., Tagawa, S., Yokota, N., Kurokawa, H., Shimizu, T.

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Seibutsu Butsuri

Year:

2004

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2004

68

2P065 Resonance Raman Study on the CO-dependent regulatory mechanism of NPAS2

Uchida, T., Sato, E., Kodo, R., Mukaiyama, Y., Kurokawa, H., Sagami, I., Simizu, T., Kitagawa, T.

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Seibutsu Butsuri

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2004

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2004

69

2P066 Activation Mechanisms of Transcriptional Regulator CooA Revealed by Small-angle X-ray Scattering

Akiyama, S., Fujisawa, T., Ishimori, K., Morishima, I., Aono, S.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

70

2P068 Exogenous ligand binding properties of human neuroglobin

Uno, T., Tsutsumi, H., Ryu, D., Kiyota, K., Tomisugi, Y., Ishikawa, Y.

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Seibutsu Butsuri

Year:

2004

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2004

71

2P069 Structural dynamics of hemoglobin following dissociation of dioxygen

Murakawa, Y., Nagai, M., Mizutani, Y.

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Seibutsu Butsuri

Year:

2004

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2004

72

2P070 Effect of silica-sol on cooperative oxygen binding of hemoglobin

Shimizu, H., Imai, K.

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Seibutsu Butsuri

Year:

2004

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2004

73

2P073 EPR analysis of hemoprotein with integar spin system (S=2) : Mn^-myoglobin

Horitani, M., Murata, T., Hori, H.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

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PDF, 245 KB

english, 2004

74

2P075 X-ray crystal structure of bis-histidine coordinated myoglobin mutants

Uno, T., Kiyota, K., Sakamoto, R., Tomisugi, Y., Ishikawa, Y., Ikemizu, S.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

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PDF, 245 KB

english, 2004

75

2P076 The Stabilization of Novel Heme Proteins Using Phage Display

Nogami, K., Takata, K., Ishimori, K., Morishima, I.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

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PDF, 245 KB

english, 2004

76

2P077 Regulation of Heme Peroxidase Reactions by Controlling the Position of the Radical Center

Ichimura, S., Tosha, T., Sugihara, Y., Kitagawa, T., Ishimori, K., Morishima, I.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

77

2P078 Interactions between Coral Allene Oxide Synthase and Substrate : Resonance Raman Investigation

Tosha, T., Uchida, T., Brash, Alan R., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

78

2P079 D_2O effect on ^1H-ENDOR signals of putidaredoxin-P450cam complex

Ishikawa, N., Kondou, M., Hori, H.

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Seibutsu Butsuri

Year:

2004

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2004

79

2P080 Reaction Mechanism of Nitric Oxide Reductase Cytochrome P450nor from Fusarium oxysporum

Tsukamoto, K., Watanabe, T., Nagashima, U., Akiyama, Y.

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Seibutsu Butsuri

Year:

2004

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2004

80

1SD53 How structure of photosystem I influences its primary photochemistry

Journal:

Seibutsu Butsuri

Year:

2004

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2004

81

2P083 Crystal structure of heme oxygenase-2 from cyanobacterium Synechocystis sp. PCC 6803

Sugishima, M., Hagiwara, Y., Zhang, Xuhong, Yoshida, T., Migita, C.T., Fukuyama, K.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

82

2P085 Redox of high-molecular weight cytochrome c by x-ray irradiation using the microspectroscopy

Sato, M., Morimoto, Y., Shibata, N., Komori, H., Takayama, Y., Ozawa, K., Akutsu, H., Higuchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

83

2P086 The reaction mechanism of AsA-dependent cytochrome b561 reduction as revealed by DEPC treatment of cytochrome b5

Nakanishi, N., Takeuchi, F., Hori, H., Okamoto, H., Tamura, A., Tsubaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

84

2P089 Expression and extraction of bovine/human hybrid cytochrome c oxidase in and from HeLa cells

Shimokata, K., Murayama, H., Katayama, Y., Suematsu, M., Yoshikawa, S., Tsukihara, T., Shimada, H.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

85

2P091 Crystallization of bovine heart Cytochrome c oxidase stabilized with 3-oxatridecyl-mannoside

Hanada, M., Fukumoto, M., Yamamoto, S., Sugimura, T., Aoyama, H., Shinzawa Itoh, K., Tsukihara, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

86

2P092 Structure of active sites of oxidized bovine heart cytochrome c oxidase

Aoyama, H., Muramoto, K., Suga, M., Hirata, K., Yamashita, E., Shinzawa-Itoh, K., Yoshikawa, S., Tsukihara, T.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

87

2P094 Resonance Raman spectroscopy of reaction intermediates of cytochrome c oxidase in intact mitochondria

Takahashi, T., Ogura, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

88

2P096 Detection of the primary ferrous nitrosyl heme intermediate in the reduction of NO by cytochrome ba_3 oxidase

Varotsis, Costas, Ohta, T., Kitagawa, T., Daskalakis, Vanselis, Gialou, Irene, Soulimane, Tewfik, Pinakoulaki, Eftychia

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

89

2P100 Structure and function of feast/famine regulatory proteins : 2. Interacton of DM1 with ligands studied using a crystal structure

Koike, H., Ishijima, S. A., Sakuma, M., Minahiro, K., Suzuki, M.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

90

2P103 Development of Prediction System for Transcription Factors and Their Targets

Sarai, A., Ahmad, Shandar, Kono, H.

Journal:

Seibutsu Butsuri

Year:

2004

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PDF, 252 KB

2004

91

2P105 Self-Organized Ordered Structure of a Single DNA Chain : What does Decide the Morphology of Toroid?

Journal:

Seibutsu Butsuri

Year:

2004

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2004

92

2P108 Analysis of DNA nano-structures by Fluorescence Correlation Spectroscopy

Kii, H., Tamura, M., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

93

2P109 Kinetic analysis of DNA hybridization of uniform melting temperatures

Kitajima, T., Takinoue, M., Suyama, A.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

94

2P111 Spectroscopic analysis of DNA duplex including T-T mismatches

Oda, S., Yamaguchi, H., Kondo, Y., Ono, A., Tanaka, Y.

Journal:

Seibutsu Butsuri

Year:

2004

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PDF, 236 KB

2004

95

2P113 Mechanism of R-loop formation at an AGAGG repeat

Toriumi, K., Tsukahara, T., Ogasawara, E., Hanai, R.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

96

2P119 Indirect readout in protein-DNA recognition : evaluation of conformational energy of DNA from molecular dynamics simulations

Arauzo-Bravo, Marcos J., Ahmad, Shandar, Fujii, S., Takenaka, S., Kono, H., Go, N., Sarai, A.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

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PDF, 222 KB

english, 2004

97

2P120 Umbrella sampling simulation of branch migraion in RuvA tetramer - Holliday junciton DNA complex

Ishida, H., Go, N.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

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PDF, 222 KB

english, 2004

98

1SD54 Structure and function of the cytochrome b_6f complex of oxygenic photosynthesis

Journal:

Seibutsu Butsuri

Year:

2004

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2004

99

2P122 Conformational Transition of DNA : Difference between Linier DNA and Circular DNA

Sato, Y., Hamada, T., Kubo, K., Kishida, T., Mazda, ., Yoshikawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

100

2P125 RNA aptamer specific for influenza hemagglutinin protein

Penmetcha, Kumar, Nishikawa, S., Kawasaki, K.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

101

2P128 Purification of the MotA/MotB stator complex in the flagellar motor of Salmonella typhimurium

Kojima, S., Minamino, T., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2004

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2004

102

2P130 Property of the Type III flagellar export chaperones and their substrate complexes

Imada, K., Yamane, M., Furukawa, Y., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

103

2P133 Deletion Analysis of the Hook Capping Protein FlgD

Matsunami, H., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

104

2P139 Effects of Monoterpene Volatiles on TypeIII protein secretion of Salmonella typhimuriun

Mizusaki, H., Yamasaki, Y., Akimitu, K., Aizawa, S., Shimada, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

105

2P142 Polar and helical localization of the chemoreceptor in an Escherichia coli cell

Yoshimoto, M., Shiomi, D., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

106

2P143 Negative feedback through the localization control of the receptor methylesterase CheB in the bacterial chemotaxis

Banno, S., Shiomi, D., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

107

2P144 Subcellular localization of the redox sensor Aer of Escherichia coli and its interaction with the chemoreceptor

Obata, Y., Shiomi, D., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

108

2P146 Single CheY regulates two different flagellar motors in Vibrio alginolyticus

Kojima, M., Yakushi, T., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

109

2P152 Calmodulin alters the dimer structure of smooth muscle IQGAP1

Hatakeyama, I., Yoshinaga, N., Yan, L-J., Minagawa, K., Okamoto, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

110

2P153 The projection domain of MAP4 participate in the cooperative binding to microtubule

Fujii, M., Hisanaga, S., Hotani, H., Itoh, T.J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

111

2P154 The projection domain dependent modification of the activities of the heat-stable MAPs on the microtubule dynamics

Permana, S., Hisanaga, S., Morita, T., Hotani, H., Itoh, T. J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

112

2P155 Theoretical approach to the mechanism by which the mitotic apparatus determines the position of the contractile ring in sea urchin eggs

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

113

2P160 Analysis of lamellipodial movements by optical trapping technique

Sakai, K., Miyata, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

114

2SB02 Functional crosstalk between Ca^ channels in junctional membrane complex

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 228 KB

2004

115

2P162 Measurement of ATP-induced contraction of cytoskeletal cortex of Dictyostelium

Yoshioka, K., Sun, Y., Mizuno, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

116

2P166 Stochastic modeling for gradient sensing by chemotactic cells with adaptation and amplification

Ishii, D., Ishikawa, K.L., Nakazawa, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

117

2P168 Effects of cAMP stimulation on efficiency of galvanotaxis in Dictyostelium discoideum

Sato, M., Ueda, M., Kuwayama, H., Takagi, H., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

118

2P169 Influence of the magnetic field exerted on form formation of physarum

Sakuma, A., Yamauchi, M., Ohno, E., Nishio, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

119

2P170 Spontaneous fluctuation of membrane potential in Paramecium

Hara, M., Nakaoka, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

120

2P173 Measuring protein kinase C dynamics using TIRFM

Ohsugi, Y., Saito, K., Tamura, M., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

121

2P174 Three-dimensional single particle tracking of the movements of HER2 in KPL4 Cell

Watanabe, T.M., Higuchi, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

122

2P175 The visualization of intercellular interaction by tracking nano-particles

Takaki, N., Higuchi, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

123

2P176 Intelligent behavior of avian influenza virus

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

124

2P179 Analysis of diffusional motion of molecular rulers in nucleoplasm and nucleolus by fluores-cence correlation spectroscopy

Pack, C., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 225 KB

2004

125

2P185 Steady-state rafts consisting of GPI anchored protein dimers

Suzuki, K, Fujiwara, T, Ritchie, Ken, Edidin, Miehael, Kusumi, A

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

126

2P186 Transient formation of endocytotic raft domains induced by receptor tyrosine kinase activation

Kobayashi, T., Takeda, Y., Murakami-Tanaka, M., Yoshimura, A., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

127

2P188 The plasma membrane compartmentalization for phospholipid diffusion is universally found in mammalian cells in culture

Umemura, Y, Murase, K, Fujiwara, T, Suzuki, K, Iino, R, Yamashita, H, Saito, M, Ritchiel, Ken, Kusumi, A, Murakoshi, H

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

128

2P189 Microtubule-based vesicle transport is facilitated by actin filaments in the early endocytic pathway

Akiyama, S., Miyata, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 277 KB

2004

129

2P190 Response of OxLDL receptors on the cell surface; a fine observation of the correlation between the expression level and its function

Matsunaga, S., Xie, Q., Sakakibara, Y., Machida, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 277 KB

2004

130

2P193 Cell cycle-dependent dynamics of the endoplasmic reticulum (ER) in mammalian cells (II) : Mechanism of membrane fusion of the ER

Kano, F., Kondo, H., Yamauchi, S., Tanaka, A.R., Hosokawa, N., Nagata, K., Murata, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

131

2P196 Tension-dependent formation of stress fibers from F-actin meshwork

Hirata, H., Tatsumi, H., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

132

2P199 Analysis of cytoskeleton organization of the fibroblast cultured on the elastic substrate

Harada, I., Akaike, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

133

2SB04 Cellular localization and genetic dieseases associated with the mutations in ABC transporters

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

134

2SC01 Molecular Properties of Visual Pigments and Photoreceptor Functions

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

135

2P201 Analysis of mechanical characteristics of cytoskeleton using micropatterned substrate

Oguni, A, Harada, I, Akaike, T

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

136

2P204 Femtosecond Pulsed Laser Induces an Intracellular Ca^ Transient and Its Intercellular Propagation in the A253 cell line

Tanimura, N., Nakabayashi, S., Yamashita, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

137

2P206 Interaction between neurites and keratinocytes

Kawamura, T., Suzuki, R., Furuno, T., Nakanishi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 248 KB

2004

138

2P207 Involvement of Syn-CAM in the interaction between nerves and mast cells

Furuno, T., Ito, A., Kitamura, Y., Nakanishi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 248 KB

2004

139

2P208 The role of cadherins in neurite-mast cell communication

Suzuki, A., Suzuki, R., Furuno, T., Nakanishi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 248 KB

2004

140

2P212 vesicle deformation in shear flow

Noguchi, H., Gompper, Gerhard

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 216 KB

2004

141

2P215 Microscopic observation of liposome shrinkage and membrane fusion induced by peptides derived from influenza hemagglutinin

Inaba, T., Nomura, F., Ishikawa, S., Takahashi, S., Hotani, H., Takiguchi, K., Nagata, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 274 KB

2004

142

2P217 Melittin determines the topological transformation of liposomes through their binding manner to membrane

Nomura, F., Nakamura, Y., Hotani, H., Takiguchi, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

143

2P220 Interaction between sphingomyelin and cholesterol in CHO cells inferred by imaging technique of membrane fluidity

Muto, K., Ohba, T., Ohki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

144

2P226 Development of a novel method for analyzing gating mechanism of a single mechanosensitive channel

Machiyama, H., Tatsumi, H., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

145

2P228 Identification of tension sensor of MscS, a mechanosensitive channel of E. coli

Nomura, T., Yoshimura, K., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

146

2P234 Functional interaction between sarcoplasmic reticulum Ca^-ATPases

Ushimaru, M., Fukushima, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

147

2P236 Irrelevance of the Free Energy Change of ATP Hydrolysis as the Energy Source of Work by ATPase

Fukushima, Y., Ushimaru, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

148

2P237 Mechanisms underlying discrimination of arnino acid ligands by two closely related chemoreceptors, Tsr and Tar of Escherichia coli

Tajima, H., Sakuma, M., Hattori, F., Sumii, M., Nara, T., Kamo, N., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

149

2P238 MD simulation of the ligand recognition by the aspartate chemorecptor Tar

Hotta, Y., Tajima, H., Hattori, F., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

150

2P239 Relationship between receptor methylation and dimer-to-dimer interaction in chemotactic signal transduction of Escherichia coli

Irieda, H., Homma, M., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

151

2P240 A solid state ^C NMR study of the structure of the PLC-deltal PH domain at the membrane : the effest of a negatively lipid

Tuzi, S., Sugita, T., Uekama, N., Okada, M., Yagisawa, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

152

2SC02 Phototransduction in cones

Tachibanaki, S., Arinobu, D., Matsukawa, Y.-S., Tsushima, S., Kawamura, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

153

2SC03 Light-driven Translocation of Arrestin-EGFP Fusion Prtein in Xenopus Rod Photoreceptors

Edward, N.Pugh Jr., Calvert, Peter

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

154

2SC05 Feedback Regulation of Ca Current in Photoreceptors

Tachibana, M, Hosoi, N, Arai, I

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

155

2P245 Cryogenic atomic force microscope observation of purple photosynthetic bacteria chromatophore

Yamamoto, D., Iida, K., Fukushima, Y., Ito, S., Nango, M., Kouyama, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

156

2P246 Stabilization of photosynthetic antenna protein LH2 by adsorption inside silica nano-pore

Oda, I., Shibata, Y., Kajino, T., Fukushima, Y., Iwai, S., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

157

2P247 Variation of antenna size of a purple bacterium Rhodospirillum rubrum grown under the different light intensity

Mochida, T., Akiyama, M., Itoh, Y., Nagasima, K., Hara, M., Wakayama, T., Hoshino, T., Kobayashi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

158

2P251 Detection of low-frequency vibrational modes of reaction intermediates in photosynthetic water oxidation

Kimura, Y., Yamanari, T., Ishii, A., Hasegawa, K., Ono, T.-A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

159

2P252 What was 'split signal'?

Mino, H., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

160

2P253 Secondary electron transfer pathway via carotenoid and chlorophyll Z in photosystem II

Kitajima, Y., Sugiura, M., Noguchi, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

161

2P256 Modification of spectral and kinetic properties of fluorescence in phosphatidylglycerol depleted thylakoid membranes

Komura, M., Shibata, Y., Domonkos, Ildiko, Gombos, Zoltan, Wada, H., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

162

2P260 Pigments analyses of Acaryochloris marina and Gloeobacter violaceus PCC7421

Itoh, Y., Miyashita, H., Yamashita, T., Tsutiya, T., Mimuro, M., Kobayashi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

163

2P261 Photosystem II in heterocyst in Nostoc sp. Studied by confocal microspectroscopy

Sugiura, K., Shibata, Y., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

164

2P262 Phycobilin content influences phtosystems in Acaryochloris.marina containing chlorophyll d

Shigenaga, T., Aoyama, D., Nakamura, Y., Mino, H., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

165

2P264 Detection of conformational change from dark state to M intermediate in a Photoactive Yellow Protein with hydrophobic fluorescent probes

Matsumoto, K., Hamada, N., Ichida, H., Nakamura, R., Kanematsu, Y., Tokunaga, F.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

166

2P266 MD Simulation Study of the Ground and Intermediate States of Phot-LOV2

Nabeno, M., Kamiya, N., Higo, J., Tokutomi, S., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

167

2P267 The role of PAS domain for oligomeric state and DNA binding activity of PpsR

Fukusumi, H., Yamazaki, Y., Kamikubo, H., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

168

2P271 Production of Metal Nanowires by Use of Self-Assembly of RecA Protein and DNA

Nishinaka, T., Hashimoto, M., Nakamura, A., Kumaki, J., Yashima, E.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 275 KB

2004

169

2P272 Single-molecule Imaging of membrane proteins embedded in a planner bilayer

Tabata, K., Yamada-Kato, Y., Ide, T., Okuno, D., Yabe, I., Nishizaka, T., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 275 KB

2004

170

2P273 3D reconstruction imaging of membrane fluidity (2)

Ohba, T., Aso, K., Ohki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 323 KB

2004

171

2P275 In vivo Observation of Subcellular Nano-Structures with Hilbert Differential Electron Microscopy

Nagayama, K., Danev, Radostin, Nitta, K., Kaneko, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 323 KB

2004

172

2P276 Observation of chromosomes and proteins by scanning probe micoscopy

Sugiyama, S., Shichiri, M., Yoshino, T., Sekiguchi, H., Sasou, M., Hagiwara, S., Ohtani, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 323 KB

2004

173

2P277 Direct measurement of the change of the double helical structure in a single DNA molecule

Hayashi, M., Harada, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

174

2P279 Protein tyrosine phosphatase activity is reduced during cell growth, as revealed by ratiometric imaging of living cells

Kikuchi, K., Takakusa, H., Nagano, T., Sawano, A., Miyawaki, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

175

2P280 Lateral diffusion of IP_3 receptor typel is regulated by actin filaments and 4.1N

Fukatsu, K., Bannai, H., Zhang, S., Nakamura, H., Inoue, T., Mikoshiba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

176

2SD02 Protein folds and knots

Taylor, William R.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 174 KB

english, 2004

177

2P282 Imaging of CD69 translocation to the cell surface on the activation of neutrophil

Yamagishi, M., Murayama, K., Sakamoto, A., Arai, T., Suzuki, K., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

178

2P283 Single molecule imaging of mRNA splicing

Ishihama, Y., Tadakuma, H., Tani, T., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

179

2P285 Single-molecule imaging of integrated membrane protein, FtsH

Ohkawa, J., Okuno, T., Ogura, T., Oiwa, K., Nishizaka, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

180

2P286 Development of a high-pressure fluorescent microscope

Nishiyama, M., Kimura, Y., Terazima, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

181

2P287 Development of a novel mechano-fluorescence microscope for measurement of DNA/protein interaction at single molecule level

Yokota, H., Allemand, Jean-Francois, Xi, Xuguang, Croquette, Vincent, Bensimon, David

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

182

2P289 Preparation of substrata for high-speed AFM imaging of protein molecules at work

Maeda, D., Miyagi, A., Kodera, N., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

183

2P290 Improvements in the high-speed AFM

Ito, H., Uchihashi, T., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

184

2P292 Direct measurement of unbinding force between complementary strands of DNA

Hibino, M., Fujikawa, J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

185

2P293 Biosensing with one micro liter suspension using AFM

Tanaka, S., Sugasawa, H., Morii, T., Okada, T., Abe, M., Kato, N., Kuroda, R., Nasu, T., Nagai, M., Umemura, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 318 KB

2004

186

2P294 Fabrication of nano-pattern using replica molding of self-assembled protein

Yamashita, H., Nagaoka, S., Matsushita, T., Nishikawa, T., Sezaki, H., Norioka, S., Wazawa, T., Aoyama, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 318 KB

2004

187

2P295 Invasiveness of insertion operation using an ultra-thin needle upon a living cell

Nakamura, C., Han, S., Obataya, I., Nakamura, N., Miyake, J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 318 KB

2004

188

2P296 Single cell operation by using AFM with various ultra-thin needles and LSM observation

Obataya, I., Nakamura, C., Han, S., Nakamura, N., Miyake, J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 318 KB

2004

189

2P297 Improvements of a sorter using thrmosensitive hydrogel in micro flow system

Sugino, H., Shirasaki, Y., Wada, Y., Tsutsui, K., Edura, K., Shoji, S., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 229 KB

2004

190

2P298 Biomolecules Sorting By Micro Flow System with Thermal Gelation

Shirasaki, Y., Izumi, T., Mizuno, J., Shoji, S., Wada, Y., Tsukita, S., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 229 KB

2004

191

2P300 A massively parallel memory based on hairpin DNA

Takinoue, M., Hatano, Y., Suyama, Akira

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 229 KB

2004

192

2P301 Conversion of nucleic acid sequence by autonomous molecular computer

Kiga, D., Mochida, T., Takinoue, M., Suyama, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

193

2P302 Control of higher order structure of single genomic DNA using optical tweezers

Oana, H., Kubo, K., Atomi, H., Imanaka, T., Yoshikawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

194

2P303 Controlling of higher otder structure of single genomic DNA : Visualization with FM/AFM

Shindo, E., Kubo, K., Nakai, T., Oana, H., Imanaka, T., Atomi, H., Hazemoto, N., Yoshikawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

195

2P306 The effect of N-terminal residues on the self-assembly of apoferritin

Yoshizawa, K., Iwahori, K., mishima, Y., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

196

2P307 Characterization of Es-cherichia coli Dps : DNA-binding proteins from starved cells

Mishima, Y., Yamane, M., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

197

2P309 Fabrication of indium nano particles using ferriritn

Okuda, M., Yamashita, I., Yoshimura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

198

2P311 Fabrication of perfect and uniform iron-core in ferritin

Kondo, T., Okuda, M., Kobayashi, Y., Sonoda, K., Yoshimura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

199

2P314 Cell Culture and purification of the selected cells on close-packed microsphere monolayer

Anzai, Y., Moriguchi, H., Hattori, A., Kaneko, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 316 KB

2004

200

2P319 Directional control of gliding motility of Mycoplasma mobile by lithographic micropatterns

Hiratsuka, Y., Miyata, M., Uyeda, T.Q.P.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 204 KB

2004

201

2SD04 Intrinsic Disorder and Protein Function

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 198 KB

english, 2004

202

2SD05 Protein structure predictions for new fold targets in CASP6

Chikenji, G., Fujitsuka, Y., Park, S.J., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 198 KB

english, 2004

203

3SA01 Web services will expand the rich information environment for biology

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 198 KB

english, 2004

204

3P001 How L-arginine solubilize and renature recombinant protein from inclusion bodies

Umetsu, M., Tsumoto, K., Nitta, S., Adschiri, T., Kumagai, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

205

3P002 Enhancement of Protein Solubility by Adding Charged Amino Acids

Kato, A., Kuroda, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

206

3P004 AC calorimetric heat-capacity measurement on thermal denaturation in proteins I. Pepsinogen

Yao, H., Ema, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

207

3P005 Correlation between alcohol induced denaturation of synthetic peptide and structure of solvent clusters

Nakamura, S., Yoshida, K., Lee, S., Yamaguchi, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

208

3P012 Stability of cytochrome c-552 from a moderate thermophilic bacterium, Hydrogenophilus thermoluteolus

Ichiki, S., Nakamura, S., Ohshima, A., Kobayashi, Y., Hasegawa, J., Uchiyama, S., Nishihara, H., Mizuta, K., Sanbongi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

209

3P015 Direct observation of the enthalpy change accompanying the acid-induced transition from the native to moltenglobule state of cytochrome c

Nakamura, S., Kidokoro, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

210

3P016 Pressure effect on the secondary structure of cytochrome c

Ikeuchi, Y., Okuno, A., Taniguchi, Y., Kato, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

211

3P017 Contribution of dehydration to reduced cytochrome c folding revealed by high pressure measurements

Kimura, T., Sekiyama, N., Sakamoto, K., Morishima, I., Ishimori, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 282 KB

2004

212

3P018 Slow motion analysis of cytochrome c folding dynamics using a porous sol-gel

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 282 KB

2004

213

3P019 Development of the rapid mixing apparatus by laser processing and elucidation of the initial collapse in the cytochrome c folding

Matsumoto, S., Yane, A., Goto, Y., Takahashi, S., Hashida, M., Fujita, M., Nakashima, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 282 KB

2004

214

3P020 Iso-1-Cytochrome c Folding Studied by a New Method of Single Molecule Detection

Kinoshita, M., Goto, Y., Takahashi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 282 KB

2004

215

3P022 Helix environment in the early folding intermediate of apomyoglobin detected by time-resolved IR spectroscopy

Nishiguchi, S., Goto, Y., Takahashi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

216

3P024 Substrate-recognition mechanism on non-native structure of Staphylococcal nuclease

Onitsuka, M., Kamikubo, H., Yamazaki, Y., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

217

3P025 The role of active site residues in the conformational stability of ribonuclease HII from a hyperthermophile, Thermococcus kodakaraensis

Mukaiyama, A., Koga, Y., Takano, K., Kanaya, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

218

3P030 Solvent effect on the conformation of Hen-Egg-White-Lysozyme by Low-Frequency Raman spectroscopy

Noguchi, H., Taniguchi, Y., Kato, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

219

3P032 Residue-specific study on effects of glycerol on proteins in non-native states -Differences between 0SS and 2SS-variants of lysozyme

Yamasaki, K., Kimura, M., Noda, Y., Tatibana, H., Segawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

220

3P033 Structural analysis of lysozyme 2SS variant [6-127, 64-80] by means of NMR-detected amide hydrogen exchange

Doi, G., Yamazaki, K., Segawa, S., Tachibana, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

221

3P034 Mass spectrometric study of regeneration processes of disulfide bridges in 3SS-variants of lysozyme : Effects of glycerol

Okamoto, K., Noda, Y., Tachibana, H., Segawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

222

3P040 Acid Denaturation and Refolding of Green Fluorescent Protein

Enoki, S., Saeki, K., Maki, K., Inobe, T., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 220 KB

2004

223

3SA03 Standardization and Integration of Protein Structure Database

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 215 KB

2004

224

3SA05 Hydrogen and hydration for bio-macromolecules

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 215 KB

2004

225

2SA51 Microbial Rhodopsins : Structure and Mechanism in Sensory Signaling and Transport

Spudich, John L.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 241 KB

english, 2004

226

10.2142/biophys.44.s1_2

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 241 KB

english, 2004

227

3P041 Structure of the transition state for folding of human α- lactalbumin

Saeki, K., Kamagata, K., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

228

3P042 Effects of the Stabilization of the Molten Globule State on the Folding Mechanism of α-Lactalbumin

Matsuura, A., Mizuguchi, M., Nabeshima, Y., Demura, M., Nitta, K., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

229

3P046 Effect of the Ionic Strength on the Thermal Unfolding Process of Granulocyte-Colony Stimulating Factor(G-CSF)

Yamazaki, K., Iwura, T., Ishikawa, R., Ozaki, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

230

3P047 The role of amino acid residues existing in unusual environments of hyperther-mophile protein in folding and stability

Iimura, S., Ogasahara, K., Noda, Y., Segawa, S., Yutani, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

231

3P048 Thermodynamic and mechanical stability of concatenated GroES

Sakane, I., M., Fumihiro, Hongo, K., Mizobata, T., Kawata, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

232

3P049 Influence of GroEL fluctuations by binding nucleotides using single molecule detection system

Miyazaki, T., Okumura, Y., Kawata, Y., Sasaki, Y. C.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 263 KB

2004

233

3P050 Activation mechanisms of hyperthermophilic Pyrobaculum islandicum glutamate dehydrogenase produced in recombinant E. coli

Nishikawa, Y., Goda, S., Yoneda, K., Sakuraba, H., Tsuge, H., Katunuma, N., Hiragi, Y., Ohshima, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 263 KB

2004

234

3P051 Relationship between local/global structures and import rates of mitochondrial precursor proteins

Satoh, T., Esaki, M., Fernandez, Julio M., Endo, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 263 KB

2004

235

3P052 An attempt at understanding sequence information in photoactive yellow protein

Shirai, K., Yamazaki, Y., Kamikubo, H., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 263 KB

2004

236

3P055 Prevention of thermal aggregation of lysozyme using naturally occurring polyamines

Okanojo, M., Shiraki, K., Takagi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 213 KB

2004

237

3P058 Analysis of amyloid-like fibril formation of a disulfide-deficient variant of hen lysozyme

Takizawa, T., Kouno, T., Ohkawa, T., Kondo, J., Yoshizumi, A., Mori, Y., Akasaka, K., Tachibana, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

238

3P060 Contribution of the Folding Intermediates to Amyloid Fibrillation Investigated Using the Canine Milk Lysozyme Variant

Nonaka, Y., Watanabe, M., Aizawa, T., Mizuguchi, M., Demura, M., Nitta, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

239

3P063 Structural variety of amyloid fibrils formed by yeast prion Sup35 in different solutions

Kishimoto, A., Hasegawa, K., Suzuki, H., Taguchi, H., Yoshida, M., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

240

3P065 Study on the interaction between hair proteins and some agents which improve hair setting durability

Itou, T., Nojiri, M., Otsuka, Y., Nakamura, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

241

10.2142/biophys.44.s206_2

Kamatari, Y.O., Saito, K., Izumi, K., Kaneno, D., Nakamura, A., Abe, T., Seimiya, K., Kasai, T., Tochio, N., Chikayama, E., Koshiba, S., Hayashi, F., Hirota, H., Yoshida, M., Inoue, M., Yabuki, T., Ao

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

242

3P067 ROKKY : Protein Structure Prediction Server

Jin, W., Furuta, T., Park, S.J., Koga, N., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

243

3P071 Study of a protein structure sampling method simulating molecular chaperone toward the de novo structure prediction

Furuta, T., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

244

3P072 Lattice model study on stability of protein dimer

Nakanishi, K., Kikuchi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

245

3P075 Contribution of Hydration Water to the Partial Specific Volume of Proteins

Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

246

3P076 Statistical Analysis of Hydrogen Bonds in Protein Interior

Shiina, S., Hara, T., Seki, Y., Mori, K., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

247

3P079 Large gain in translational entropy of water upon protein folding

Harano, Y., Kinoshita, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 257 KB

2004

248

3P080 Hydration thermodynamics of protein studied by the 3D-RISM theory

Imai, T., KOVALENKO, Andriy, Hirata, F.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 257 KB

2004

249

3SB03 Diels-Alder Reaction in Proteins

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

250

3P081 Changes in thermodynamic properties caused by amino acid substitutions in lattice proteins

Abe, H., Wako, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

251

3P087 Effects of the removal of a S-S bond, C64-C80 or C76-C94, on the structural stability of lysozyme predicted by MD simulation

Fukutsuka, K., Okada, O., Segawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

252

3P088 Folding/unfolding pathways of a (β/α)_8-barrel protein studied by molecular dynamics simulations and protein fragmentation experiments

Akanuma, S., Miyagawa, H., Kitamura, K., Yamagishi, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

253

3P090 Protein dynamics of ligandinduced conformational change in adenylate kinase

Fuchigami, S., Ikeguchi, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

254

3P093 Phytogeny of protein folding trajectories reveals a unique pathway to native structure

Ota, M., Ikeguchi, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 215 KB

2004

255

3P094 A ligand-protein docking accompanied by the large-scale conformational change of the protein using steered MD

Tatsumi, R., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 215 KB

2004

256

3P096 Free-energy landscape of a peptide studied by a multi-overlap MD simulation

Itoh, S., Okamoto, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 215 KB

2004

257

3P099 Volume Fluctuation Dynamics of Proteins by Molecular Dynamics Simulation

Mori, K., Yamada, Y., Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

258

3P100 Theoretical analysis of High pressure NMR experiment by molecular dynamics simulation

Hashimoto, M., Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

259

3P103 Gene expression on bead using in vitro virus

Yamaguchi, J., Sasaki, T., Siratori, M., Funatsu, T., Nemoto, N.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 222 KB

english, 2004

260

3P107 Design of Antibody-Mimetic Artificial Proteins

Suzuki, H., Konakahara, T., Morii, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 223 KB

2004

261

3P108 Creation of cold-adapted subtilisin by directed evolution

Kawabata, M., Morimoto, S., Tamura, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 223 KB

2004

262

3P110 Engineering of phenylacetaldehyde reductase for improved substrate conversion in concentrated 2-propanol

Makino, Y., Dairi, T., Itoh, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

263

3P116 The correlation of the novel protein secondary structure assignment and the cleavage site of protein sequence with protease

Hong, R., Osoegawa, H., Konko, K., Ohuchi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

264

3P117 Expression of beta propeller type phosphotriesterase and its secondary structure analysis

Hirano, S., Abe, M., Ohuchi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

265

3P118 Computational protein design system with allatom models

Ito, H., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

266

3P119 Born Energy calculation of Avian Pancreatic Polypeptide by using Boundary Element Method

Kawakami, T., Iwanaga, T., Takasaki, T., Irisa, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

267

3P120 Possible predictability on the stable structures of proteins based on nanosecond molecular dynamics simulations

Murayama, S., Mori, T., Nishigaki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

268

3SB05 Structural chemical mechanism of cytochrome c oxidase

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

269

3P124 Directional motion induced by dynamically regulated energy barriers

Nakagawa, N., Komatsu, T.S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

270

3P128 A Model for free energy transduction by correlated fluctuation

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

271

3P131 A preferential landing model for processive 5.5nm steps of myosin-II

Kitamura, Kazuo, Tokunaga, Makio, Hikikoshi Iwane, Atsuko, Yanagida, Toshio

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

272

3P133 The structural relaxation of myosin motor domain : Molecular dynamics simuiations

Takagi, F., Kikuchi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

273

3P134 Free energy landscape of tubulin by realistic lattice model

Kenzaki, H., Kikuchi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

274

3P136 Crystallization of ATPsynthase

Shirakihara, Y., Shiratori, A., Murakami, S., Suzuki, T., Yoshida, M., Shirakihara, C

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

275

3P137 X-ray crystal structure analysis of TF_1 epsilon subunit

Kajiwara, N., Tanaka, H., Yagi, H., Tsukihara, T., Yamada, Y., Yoshida, M., Akutsu, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

276

3P140 Conformational states of the epsilon-subunit of F_0F_1 ATP synthase revealed by single-pair FRET

Iino, R., Suzuki, T., Yoshida, M

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

277

3P142 Angle dependency of ATP-binding constant of F1-ATPase

Sakakihara, S., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

278

3P146 Temperature Dependence of the Rotation of F_1-ATPase(2)

Furuike, S., Sakaki, N., Adachi, K., Itoh, H., Kon-Shimo, R., Yoshida, M., Kinosita Jr., K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

279

3P149 Mechanism of rotation and ATP binding/release in F_1-ATPase

Adachi, K., Nishizaka, T., Shimabukuro, K., Noji, H., Itoh, H., Oiwa, K., Yoshida, M., Kinosita Jr., K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

280

3P152 Imaging of the movements of single motor proteins labeled with CdSe nano-particle at no-load and high-resolution

Sato, T., Watanabe, T., Higuchi, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

281

3P153 Myosin V with quantum dot for analyzing its motility at high spatiotemporal resolution

Tanaka, Y., Kinoshita, T., Koide, H., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 194 KB

english, 2004

282

3P154 Watching leg motion of walking myosin V

Shiroguchi, K., Kinosita Jr, K.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 194 KB

english, 2004

283

3P155 Motility of mvosin-V regulated by dissociation of single calmodulin moleucles

Nguyen, HoaAnh, Higuchi, H.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 194 KB

english, 2004

284

3P156 Observation of one molecular MyosinV in the presence of Ca^

Koide, H., Kinoshita, T., Tanaka, Y., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 194 KB

english, 2004

285

3P160 Observation of ligand-induced structural changes of myosin VI by electron cryo-microscopy

Kano, Y., Sato, O., Honma, K., Ikebe, R., Ueyama, T., Ikebe, M., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

286

3SC01 Biophysics as a basis of nano-bio-engineering

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 255 KB

2004

287

3SC03 Potential of New Nano-biology Explored by High-speed Atomic Force Microscopy

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 255 KB

2004

288

3P161 Cargo binding regulates the processivity of single-headed wild-type myosin-VI

Iwaki, M., Katayama, E., Ikebe, M., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

289

3P164 Influence of AMP-PNP on movement and fluctuations an actin filament sliding on Dictyostelium myosin

Sakamaki, J., Hatori, K., Imai, E., Honda, H., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

290

3P165 Kinetic analyses of a recombinant motor domain of Chara corallina myosin

Ito, K., Kashiyama, T., Sutoh, K., Yamamoto, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 268 KB

2004

291

3P167 Single molecule mechanics of Chara myosin : investigation of processivity

Nose, H., Machiyama, H., Ishijima, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 268 KB

2004

292

3P168 Three-dimensional structure of EDC-crosslinked acto-S1 under super-activatedATPase conditions

Katayama, E., Nonaka, K., Umeki, N., Yoshizawa, T., Oguchi, Y., Kimori, Y., Maruta, S., Baba, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 268 KB

2004

293

3P169 Analysis of cooperative binding between actin and myosin by GFP fusion HMM

Ijichi, K., kuroki, R., Uyeda, T.Q.P, Tokuraku, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

294

3P170 Photoregulation of smooth muscle myosin ATPase activity by photochromic molecule

Yamada, M., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

295

3P171 Elongation, contraction, and bending motion of actin bundles induced by double-head myosin

Takiguchi, K., Tanaka-Takiguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

296

3P172 MAP4 isoforms regulate sliding velocity of microtubule-kinesin

noguchi, T., matusima, K., kotani, S., Tokuraku, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

297

3P173 Force-velocity relation-ships of heterodimeric kinesins : 'hopping' by rapid detachment and re-attachment of head

Imafuku, Y., Thomas, N., Tawada, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

298

3P174 The speed of microtubules moving along and across kinesin filaments is independent of angles between microtubules and kinesin filaments

Taba, T., Edamatsu, M., Toyoshima, Y.Y, Toba, S., Yamada, A., Imafuku, Y., Tawada, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

299

3P176 Observation of conformational changes of kinesin walking along microtubules using single molecule FRET technique

Tomishige, M., Stuurman, Nico, Vale, Ronald D.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

300

3P177 How are the helix 12 in α- and β-tubulin subunit involved in kinesin motility?

Uchimura, S., Katsuki, M., Kawaguchi, T., Usui, T., Osada, H., Muto, E.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

301

3P180 Analysis of Conformational Changes in the Unique loop L5 of Rice Knesin

Umeki, N., Nakayama, Y., Ohori, M., Yamada, M., Kondo, K., Mitsui, T., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

302

3P181 Biochemical analysis on the properties of C.elegans kinesin Unc-116 motor domain using fluorescent probe

Nakayama, Y., Umeki, N., Kondo, K., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 221 KB

2004

303

3P182 Incorporation of photochromic molecule into the functional site of kinesin and photo-regulation of ATPase activity

Ohori, M., Nakajima, Y., Tada, H., Kondo, K., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 221 KB

2004

304

3P183 Role of unique loop L5 in the motor domain of kinesin

Tada, H., Kondo, K., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 221 KB

2004

305

3P184 Function-alization of Microtubule by Supramolecular Side Chain and Motility Assay on Kinesin Motor Substrate

Kato, K., Goto, R., Kato, K., Furusawa, K., Shibakami, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 221 KB

2004

306

3P185 Oscillatory movement of multiple one-headed kinesin molecules on a bead

Kamei, T., Higuchi, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 276 KB

2004

307

3P187 Approach to 3D-reconstruction of cytoplasmic dynein heavy chain by electron cryo-microscopy

Saito, R., Kon, T., Ohkura, R., Nishiura, M., Ueyama, T., Suto, K., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 276 KB

2004

308

3P190 Multiple ATP-hydrolyzing sites that potentially function in cytoplasmic dynein

Takahashi, Y., Edamatsu, M., Toyoshima, Y.Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

309

3P191 Interaction between cytoplasmic dynein stalk and microtubules

Hirota, K., Edamatsu, M., Toyoshima, Y.Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

310

3P192 The minimal motor domain of cytoplasmic dynein

Nishiura, M., Kon, T., Ohkura, R., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

311

3P194 Mutational analysis of AAA1 and AAA3 modules of cytoplasmic dynein

Imamura, K., Kon, T., Ohkura, R., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

312

3P195 Processivity of single-headed cytoplasmic dynein

Shima, T., Kon, T., Ohkura, R., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

313

3P197 Evaluation of machanical propreties of Chlamydomonas inner-arm dynein subspecies f by using in vitro motility assay

Kotani, N., Sakai, Y., Kojima, H., Oiwa, K., Sakakibara, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

314

3P200 X-ray diffraction analysis of the dynamic structural change of sea-urchin sperm flagellar axonemes

Kamimura, S., Wakamatsu, J., Tamura, T., Fujisawa, T., Iwamoto, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

315

3SD01 Crystal structure of the Escherichia coli AcrA

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

316

3P201 Molecular shape or Gli349, contribute to binding to solid surface during mycoplasma gliding

Adan, O.J., Uenoyama, A., Miyata, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

317

3P203 Identification of target for binding during Mycoplasma gliding

Nagai, R., Miyata, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

318

3P204 Steps in slow flagellar rotation

Sowa, Y., Rowe, Alexander, Yakushi, T., Homma, M., Berry, Richard, Ishijima, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

319

3P205 Significance of an intramolecular disulfide bond in the flagellar P-ring component protein Flgl of Escherichia coli

Hizukuri, Y., Yakushi, T., Kawagishi, I., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

320

3P207 Assembly of the stator proteins, PomA and PomB, into flagellar motor

Fukuoka, H., Kusumoto, A., Yakushi, T., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

321

3P212 Search for amino acid components inducing ingestion or rejection of seaweeds in Aplysia feeding behavior

Fujimoto, K., Kinugawa, A., Nagahama, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

322

3P213 Simultaneous measurement of dynamics of sensor-protein localization and motility behavior in individual Escherichia coli cells

Inoue, I., Shiomi, D., Kawagishi, I., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

323

3P215 Cloning of olfactory receptor genes from the olfactory epithelium of Cynopus pyrrhogaster

Takashima, M., Sawada, K., Nakamura, T., Iwasa, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

324

3P218 Comprehensive analysis of enzymes for brain neurosteroids using PCR primers desighed by a nearest neighbering thermodynamic calculation

Ishii, H., Sonoki, Y., Furukawa, A., Hojo, Y., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

325

3P219 Acute morphological changes of hippocampal dendritic spine caused by stress-hormone

Komatsuzaki, Y., Hojo, Y., Sonoki, H., Oishi, Y., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

326

3P222 Synaptic stimulation-dependent local translational regulation by a novel RNA-binding protein RNG105

Shiina, N., Shinkura, K., Tokunaga, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

327

3P223 Molecular imaging of local translation initiation in neuronal dendrites

Miyagi, H., Shiina, N., Tokunaga, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

328

3P224 Association of neuronal mRNA transport complex and mitochondrial rRNA

Shinkura, K., shiina, N., Sakata-Sogawa, K., Tokunaga, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

329

3P228 Identification and characterization of gravity sensing genes by gene knockdown and behavioural analysis

Tsuda, M., Arime, Y., Inada, K., Sakurai, D., Horie, T., Kusakabe, T., Kohmura, Y., Ohtsuki, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

330

3P233 The effects of estradiol and DES on the rat hippocampus using multielectrode arrays

Ogiue-Ikeda, M., Takata, N., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

331

3P235 Synaptic localization of estrogen receptor alpha and neurosteroidogenic enzymes in the hippocampus

Mukai, H., Kominami, S., Murakami, G., Hojo, Y., Janssen, William, Morrison, John, Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

332

3P239 Role of arachidonic acid and its metabolites in the induction of DHPG-induced long-term depression

Shiroma, S., Kometani, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

333

3P240 Neural mechanisms of monkey prefrontal cortex for time perception

Oshio, K., Chiba, A., Inase, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

334

3SD04 Functon and Structure of human erythrocyte membrane protein Band 3

Abe, Y., Hamasaki, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

335

3SD05 Structure and function of Ca pump and the molecular basis of genetic diseases caused by its mutations

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

336

3SA51 Forefront of Technological Development for Structural Genomics/Structural Proteomics

Nakagawa, A., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

337

3P245 Electrophysiological measurements of artificially constructed neuronal networks

Suzuki, I., Sugio, Y., Jimbo, Y., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 288 KB

2004

338

3P246 Electrophysiological measurement of network consisted of nerve tissue and single cell

Shibata, K., Sugio, Y., Suzuki, I., Kaneko, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 288 KB

2004

339

3P247 Asynchronous Parallel Computing Process of Slime Mold Computer

Aono, M., Hara, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 288 KB

2004

340

3P249 The depth perception induced from plaid pattern motion

nakamura, T., Yano, R.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

341

3P250 New method for event detection by both forward and backward prediction, illustrating the event in time series of insect

Fukano, T., Gunji, Y-P.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

342

3P251 Statistical characteristics in the random motion of Amoeba proteus

Masaki, N., Tsuchiya, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

343

3P252 Thermodynamical and Informatical Interpretation of Evolutionary Dynamics in an Evolution Reactor

Aita, T., Husimi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

344

3P253 Universal Property of Network Evolution : Emergence of Scale-Free Network

Furusawa, C., Kaneko, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

345

3P254 A Model of Proto-cells based on Three Dimensional Lattice Artificial Chemistry

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

346

3P256 Promoter evolution in a Natural-Selection-type evolution experiment based on isothermal nucleic acid amplification

Nagayasu, H., Ma, X., Ageno, Y., Husimi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

347

3P262 Prebiotic synthesis of complex molecules in hydrothermal environments and their characterization

Shibata, H., Koyama, A., Imai, E., Honda, H., Hatori, K., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

348

3P263 Molecular evolution of brain-specific globin, Neuroglobin

Wakasugi, K., Morishima, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

349

3P268 A domain architecture analysis in single-spanning transmembrane proteins

Arai, M., Fukushi, T., Mizuta, S., Satake, M., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

350

3P269 Analysis of contact pairs between transmembrane helices

Hayashibara, H., Hamada, S., Nishio, T., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

351

3P270 Multiple alignment of transmembrane protein sequences and length-variable loops

Ohta, T., Kimura, T., Nishio, T., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

352

3P272 Prediction of Protein-Protein interactions using the physicochemical properties and the shapes of molecular surfaces

Tsuchiya, Y., Kinoshita, K., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

353

3P273 CoLBA : Comparative ligand binding analysis

Hirokawa, T., Akiyama, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

354

3P274 Analysis of physical properties of all-α and all-β type proteins

Imai, K., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

355

3P277 Specific combinations of amino acid fragments for discrimination of allergens from non-allergens

Asakawa, N., Teshima, R., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 233 KB

2004

356

3P279 A highly reliable prediction procedure of transmembrane topology for GPCR classification and identification

Inoue, Y., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 233 KB

2004

357

3SA54 Protein Crystallization Under the Micro Gravity Condition

Inaka, K, Sugiyama, S, Tanaka, H, Yamanaka, S, Yamanaka, M, Sato, M, Kobayashi, T

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

358

3SA55 Crystal structure determination using a laboratory X-ray source

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

359

3P281 Highly condenced GPCR Gene Cluster(Gene nion)

Suwa, M., Fujibuchi, W., Ono, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

360

3P282 FCANAL : a structure based protein function prediction method. Application to enzyme active sites and metal binding sites

Suzuki, A., Ando, T., Yamato, I., Miyazaki, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

361

3P288 Shift of alternative splicing profiles on Arabidopsis thaliana transcriptome under cold stress

Iida, K., Seki, M., Sakurai, T., Satou, M., Akiyama, K., Toyoda, T., Konagaya, A., Shinozaki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

362

3P289 Automatic identification of transcription factors(TFs) and Comparative genomics of TFs

Minezaki, Y., Nishikawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

363

3P290 Analysis of tandem repeats found in 44 prokaryotic genomes and genome evolution

Mizuta, S., Abulimiti, A., Kimura, T., Oosawa, K., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

364

3P296 Single bio-molecular fluctuations and molecular activities due to light absorption

Okumura, Y., Miyazaki, T., Sasaki, Y.C.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 267 KB

2004

365

3P299 Observation of the fluorescence change of green fluorescence protein under mechanical perturbation with an AFM probe

Kodama, T., Ohtani, H., Arakawa, H., Ikai, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 267 KB

2004

366

3P301 The subject arid the possibility of biomaterial observation by SPM

Shigeno, M., Nihei, A., Matsuzawa, O., Watanabe, N., Shirakawabe, Y., Inoue, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

367

3P304 Improvement of method for time-lapse measurement of mRNA in single live cell

Kohno, H., Kim, H., Suzuki, I., Okano, K., Osada, T., Ikai, A., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

368

3P305 Development of Probe Production for Quantitative Measurement of Expressed Gene Numbers

Kim, H., Okano, K., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 291 KB

2004

369

3P306 Development of a single-mode waveguide SPR sensor fabricated through a polymer replication method

Nishikawa, T., Kishimoto, J., Sezaki, H., Matsushita, T., Yamashita, H., Norioka, S., Wazawa, T., Aoyama, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 291 KB

2004

370

3P307 Development of a new system for acquiring action potentials from individual neurons derived from suprachiasmatic nucleus

Sugio, Y., Terazono, H., Suzuki, I., Kaneko, T., Nakashima, M., Sasaki, H., Jimbo, Y., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 291 KB

2004

371

3P308 Analysis of response to stationary phase buffer in Escherichia coli

Wakamoto, Y., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 291 KB

2004

372

3P312 Activity measurements of mitochondria adsorbed on plastic or glass base

Uechi, Y., Yoshioka, H., Saegusa, H., Ohta, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

373

3P313 A novel method of thermal activation and temperature measurement in the microscopic region around single living cells

Zeeb, Vadim, Suzuki, M., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 274 KB

2004

374

3P315 Development of a next-generation technology(FTMRI) for human brain mapping

Seiyama, A., Seki, J., Yoshioka, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 274 KB

2004

375

3SA56 Structural analysis of membrane protein by solid-state NMR

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

376

3SB52 Internalization of muscarinic acetylcholine receptors

Haga, T., Yoshida, N., Jojima, E., Saito, H., Morisawa, K., Hashimoto, Y., Ichiyama, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

377

10.2142/biophys.44.s271

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 4 KB

2004

378

10.2142/biophys.44.s273_1

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 105 KB

2004

379

10.2142/biophys.44.s273_2

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 105 KB

2004

380

10.2142/biophys.44.s274

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 200 KB

2004

381

10.2142/biophys.44.s275_1

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 144 KB

2004

382

3SB54 Interactions of adaptor proteins in the intracellular vesicle transport : receptors, ubiquitin, and small GTPases

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

383

10.2142/biophys.44.s280_2

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 151 KB

2004

384

3SC52 Structural Analysis of Reaction Intermediates of Heme Oxygenase Catalysis

Unno, M., Matsui, T., Ikeda-Saito, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

385

3SC56 Crystal structure of the human FEN1-PCNA complex

Sakurai, S., Kitano, K., Morioka, H., Hakoshima, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 201 KB

2004

386

3SC57 Catalytic mechanism of copper amine oxidase : H-tunneling in the reductive half-reaction

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 201 KB

2004

387

1SA03 Molecular mechanism of mammalian ER stress response : dynamic crosstalk between response pathways

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

388

1SA04 Function of YaeL, an E. coli membrane protease involved in extracytoplasmic stress response

Akiyama, Y., Kanehara, K., Ito, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

389

1P001 Construction of an expression system of canine milk lysozyme in the metylotrophic yeast Pichia pastoris

Akieda, D., Aizawa, T., Yasui, M., Nonaka, Y., Watanabe, M., Yamamoto, H., Demura, M., Kawano, K., Nitta, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

390

1P003 Structure and Activity of ASABFd18c, Antibacterial Peptide Isolated from the Nematode Ascaris suum

Nakano, M., Aizawa, T., Miura, K., Hoshino, H., Miyazawa, M., Kato, Y., Kumaki, Y., Demura, M., Tsuda, S., Kawano, K., Nitta, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

391

1P006 Analysis of self assembly of glucagon and interaction with lipid bilayers by solid state NMR

Fujita, H., Kikuchi, A., Nishimura, K., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 248 KB

2004

392

1P009 NMR analyses of relation-ship between multidomain structure and functions of protein disulfide isomerase

Nakano, M., Yamaguchi, Y., Murakami, C., Harada, T., Kurimoto, E., Asami, O., Kazino, T., Inaba, K., Kato, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

393

1P012 Identification of prefoldin interaction site of archaeal group II chaperonin

Murase, Y., Zako, T., Ide, N., Yoshida, T., Iizuka, R., Yohda, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

394

1P014 Role of the Helical Protrusion of the Group II Chaperonin

Iizuka, R., Yoshida, T., Zako, T., Inobe, T., Kuwajima, K., Yohda, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

395

1P015 A binding mode of MHC classI and CLIP

Takekawa, K., Nakagawa, M., Tsutsumi, Y., Ishimura, Y., Morii, H., Nakanishi, H., Azuma, T., Kozono, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

396

1P016 Segmental flexibility of antibody molecules in antigen binding in solution

Nishio, K., Oda, M., Nakagawa, M., Sagawa, T., Azuma, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

397

1P025 Role of KaiA functional domains in circadian rhythms of cyanobacteria as revealed by crystal structure

Uzumaki, T., Fujita, M., Nakatsu, T., Hayashi, F., Shibata, H., Itoh, N., Kato, H., Ishiura, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

398

1P027 Protein-protein interaction between gp10 and gp11, baseplate proteins from bacteriophage T4

Nakao, T., Ali, Said, kanamaru, S., Arisaka, F.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

399

1P030 Novel stable interactions between cell adhesion molecules detected using intermolecular force microscopy at sub-piconewton resolution

Tsukasaki, Y., kitamura, K., Shimizu, K., Iwane, A. H., Takai, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

400

1P032 Structural study on fluorescent properties of new GFP-like proteins

Fukumura, E., Kikuchi, A., Karasawa, S., Miyawaki, A., Shiro, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

401

1P034 Novel Mechanisms of pH sensitivity in tuna hemoglobin : a structural explanation of the Root effect

Yokoyama, T., Chong, Khoon.Tee, Miyazaki, G., Morimoto, H., Shih, Daniel T-B., Unzai, S., Tame, Jeremy.R.H, Park, S-Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 270 KB

2004

402

1P035 A Novel Backbone Cyclization Method of Unprotected Polypeptides

Takahashi, H., Sota, H., Hong, X. Q., Takenawa, T., Iwakura, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 270 KB

2004

403

1P036 Cloning and characterization of aspartase-like gene product from Thermotoga maritima

Nishida, K., Sakane, I., Hongo, K., Mizobata, T., Kawata, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 270 KB

2004

404

1P037 Infrared spectroscopic study on the binding of a metal ion to a mutant Akazara scallop troponin C(E142D)

Nara, M., Yumoto, F., Nagata, K., Tanokura, M., Kagi, H., Ojima, T., Nishita, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

405

1P038 Mass spectrometry on H/D exchange of dihydrofolate reductase mutants at methionine-42

Inno, M., Yamamoto, T., Ohmae, E., Iwakura, M., Gekko, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

406

1P039 Crystal structure of maltohexaose-producing amylase complexed with maltohexaose

Kanai, R., Haga, K., Akiba, T., Yamane, K., Harata, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

407

1SA05 Molecular mechanism for the substrate recognition of ubiquitin ligases that recognize sugar chains in ERAD pathway

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

408

1SA06 The mechanisms of vesicle budding from the endoplasmic reticulum

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

409

1SA07 Molecular mechanism and physiological role of autophagy

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

410

1SB01 Single-molecule observation and conformational changes of flagellar dynein

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

411

1P041 The Role of a Magnesium Ion in the CRE Recognition Mechanism by the Transcription Factor CREB

Shiomitsu, E., Odai, K., Sugimoto, T., Ito, E.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

412

1P042 The domain-domain interaction in glucansucrase : enzymatic and physico-chemical properties of a series of C-terminal deletion mutants

Sadakane, T., Komatsu, H., Sarai, A., Kodama, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

413

1P044 Quantitative prediction of a change in the protein-protein interaction caused by a substitution of an amino acid residue at interface

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

414

1P047 Modeling of Loops in Protein Structures

Watanabe, Y.S., Fukunishi, Y., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

415

1P048 Development of BD Simulation Software : Application to Elucidation of Site Directed Mutagenesis Effect in Kir Channel Molecule

Takahashi, T., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

416

1P051 Moleculer dynamics simulation using off-lattice Janus-type Go model to study structural transitions of motor proteins

Nakamura, H. K., Hayashida, T., Takano, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

417

1P052 Apploach to atom model construction from 3-dimensional electron microscopic images using Spatially-Restricted Molecular Dynamics

Noda, K., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

418

1P054 Cooperative Motions of Protein and Hydration Water Molecules : Molecular Dynamics Study of Scytalone Dehydratase

Okimoto, N., Nakamura, T., Suenaga, A., Futatsugi, N., Hirano, Y., Taiji, M., Konagaya, A., Yamaguchi, I., Ebisuzaki, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

419

1P057 Structural change of protein described by linear response theory : Internal coordinates

Omori, S., Ikeguchi, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

420

1P058 Relation between structural change and substrate recognition function of MutT

Higuchi, M., Ishida, H., Kitao, A., Yamagata, Y., Go, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

421

1P060 Isolation and characterization of novel cytokine from the insect integument

Nakatogawa, S., Oda, Y., Aizawa, T., Demura, M., Hayakawa, Y., Nitta, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

422

1P062 Visualization of the interaction between amyloid-beta-protein and GM1-ganglioside

Wakabayashi, M., Matsuzaki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

423

1P063 Kinetic correlation between insulin reduction and its aggregation induced by protein disulfide isomerase

Maeda, R., Takeda, N., Ado, K., Horibe, T., Kikuchi, M., Taniguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

424

1P064 Temperature effects on the structure of PDI and reduction rate of inslin by PDI

Ado, K., Maeda, R., Horibe, T., Kikuchi, M., Takeda, N., Taniguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

425

1P068 Sensitive and precise measurement of the glycosidase activity using multi-wave-length bicinchoninic-acid method

Souma, S., Karim, Nurul, Arikawa, K., Kidokoro, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

426

1P073 Calcium binding reaction in Calmodulin : Change in solvation of protein and calcium ions

Kobayashi, C., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

427

1P075 Docking simulation based on the Poisson-Boltzmann model

Washio, T., Fukunishi, H., Takada, T., Tokushima, D., Shimada, J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

428

1P076 Application of Density Functional Theory Calculations to Flavoenzymes

Tamaoki, H., Tanaka, T., Sato, K., Setoyama, C., Nishina, Y., Tokuoka, K., Satoh, A., Miyahara, I., Hirotsu, K., Shiga, K., Miura, R.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

429

1P077 Development of single amino acid potentials for amino acids with rotational freedom on the side chain

Yosida, D., Masatsugu, T., Iwaoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

430

1P078 Investigation of structure Sampling performance of Tsallis Dynamics

Horie, M., Fukuda, I., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

431

1P079 An evaluation method of in silico screening using HIV-1 protease and inhibitor

Nomura, J., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

432

1SB02 Molecular mechanism of dynein movement

Kon, T., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

433

1SB03 Dynamic behavior of dynein and myosin V revealed by high-speed atomic force microscopy

Kodera, N., Miyagi, A., Maeda, D., Sakakibara, H., Oiwa, K., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

434

1P085 A method for conformation study of labeled protein by excimer fluorescence in the use of fluorescence detected circular dichroism

Ikkai, T., Shimada, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

435

1P087 Secondary Structure Analysis of Proteins by Vacuum-Ultraviolet Circular Dichroism Spectroscopy

Yonehara, R., Matsuo, K., Sakurada, Y., Gekko, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

436

1P088 Single molecule imaging of bio-molecular interactions using nano apertures

Ueno, T., Tanii, T., Shimamoto, N., Miyake, T., Odomari, I., Shoji, S., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

437

1P089 Antigen-Antibody-Reaction Analysis by Fluorescence Correlation Spectroscopy

Sakata, H., Morioka, H., kinjo, M., Tamura, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 333 KB

2004

438

1P096 Growing Neural Gas Network enables highly accurate classification of protein images taken by cryo-EM

Ogura, T., Sato, C.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

439

1P099 Analysis of membrane topology of an ethylene receptor protein ETR1 for the expression in E.coli

Kanemoto, M., Nakamura, H., Shiro, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

440

1P100 Dynamics of MBD1-MBD/Methylated DNA complex

Inomata, K., Ohki, I., Shimotake, N., Fujiwara, K., Tochio, H., Shirakawa, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

441

1P102 Specific lipids bound to bovine heart mitochondrial respiratory complexes

Terada, H., Yamasaki, A., Sugimura, T., Shinzawa-Itoh, K., Tadehara, Y., Hanada, M., Aoyama, H., Tsukihara, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

442

1P105 The function of the proton-counter transport in Ca^ATPase of sarcoplasmic reticulm

Miyashita, N., Sugita, Y., Ikeguchi, M., Toyoshima, C.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

443

1P106 Analysis of water transport of Aquaporin-1 by molecular dynamics simulation

Hashido, M., Ikeguchi, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

444

1P107 Molecular Dynamics Simulation of Rhodopsin

Watanabe, T., Ikeguti, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

445

1P110 Regeneration of bacteriorhodopsin from denatured bacterioopsin

Sugiyama, H., Sonoyama, M., Ghimire, G.D., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

446

1P111 Structural comparision between bacteriorhodopsin and archaerhodopsin family

Yoshimura, K., Enami, N., Okumura, H., Murakami, M., Ihara, K., Kouyama, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

447

1P113 The role of Arg-Thr and Lys-Thr of pharaonis halorhodopsin

Sato, M., Kubo, M., Aizawa, T., Kamo, N., Nitta, K., Demura, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

448

1P114 Spectroscopic analysis on the interaction between membrane and soluble proteins

Izumikawa, N., Nishikori, S., Hagihara, Y., Yumoto, N., Shiraki, K., Takagi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

449

1P115 Measurement of thermodynamic parameters for intervesicular transfer of a transmembrane helix

Ogura, M., Yano, Y., Matsuzaki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

450

1P116 Self-assembly of membrane protein structures by generalized-ensemble simulations

Kokubo, H., Okamoto, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

451

1P118 Structural Analysis of Mastoparan-X Bound to Membrane by Solid-State NMR

Todokoro, Y., Yumen, I., Kang, Shin-Won, Park, Jan-Su, Kohno, T., Wakamatsu, K., Fujiwara, T., Akutsu, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

452

1P119 Structural analysis of bacterial light-harvesting membrane proteins

Otomo, S., Gokan, K., Kobayashi, M., Nozawa, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

453

1SC02 Interacton between pigment cells to form patterns on animals

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

454

1P121 Analysis of Daphnia resting eggs by electron spin resonance(ESR) spectroscopy

Sakata, M., Kawasaki, T., Shibue, T., Takada, A., Yoshimura, H., Namiki, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

455

1P124 Dielectric property of the hyper mobile water around charged polymer chains

Miyazaki, T., Miura, Y., Saito, S., Suzuki, M., Suzuki, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

456

1P125 Dielectric property of the hypermobile water around urea molecules

Kokubo, D., Miyazaki, T., Suzuki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

457

1P126 Mechanism of Aggregate Formation of Proteins in the Mixture of Water and Organic Substances

Takahashi, N., Tomizawa, T., Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

458

1P129 Effects of models of water on number density of water molecules in contact with hydrophobic surface from molecular dynamics simulations

Hirata, Y., Irisa, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

459

1P135 Experimental and simulation studies of the unfolding of recombinant and authentic lactalbumin : Effect of an N-terminal methionine residue

Oroguchi, T., Ikeguchi, M., Saeki, K., Kidera, A., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

460

1P138 Structure of rabbit skeletal muscle myosin heavy chains A and B

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

461

1P139 Structural basis of myosin phosphatase inhibitor, CPI-17

Ohki, S., Eto, M., Yokota, K., Matsuzawa, F.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

462

1P140 Asymmetric photocross-linking of singly phosphorylated smooth muscle heavy meromyosin

Takeya, K., Takahashi, M., Katoh, T., Yazawa, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

463

1P142 The classification of Ca regulation types of shell muscle contraction

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

464

1P144 The Troponin Globular Portion Binding Domain of Tropomyosin is Critical for Ca^-Dependent Regularion of Striated Muscle Thin Filament

Sakuma, A., Shitaka, Y., kimura, C., Sakiyama, K., Miki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

465

1P145 Crystal structure of the N-domain of human cardiac troponin C in complex with trifluoperazine

Takeda, S., Igarashi, T., Oishi, Y., Mori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

466

1P148 Structural basis for Ca^-sensitive muscle relaxation at actin-binding sites of troponin

Murakami, K., Yumoto, F., Ohki, S., Yasunaga, T., Tanokura, M., Wakabayashi, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

467

1P150 Spin-spin relazation of 1-H NMR signals from myofibril suspension of rabbit skeletal muscle

Ohno, T., Kimura, M., Chiba, M., Yamaguchi, M., Takemori, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 220 KB

2004

468

1P152 Inhibition of sliding movement of actin filaments by crosslinked tropomyosins 2

Nakagawa, S., Honda, H., Hatori, K., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 220 KB

2004

469

1P158 Folding mechanism of actin analyzed by fluorescence microscopy

Okatani, M., Yamagishi, M., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

470

1P159 Biased motion of actin filaments driven by heat pulse

Kuradomi, T., Kawaguchi, T., Hatori, K., Honda, H., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

471

1P160 Surface rupture analysis of sarcomere structure of skeltal muscle myofibrils by laser tweezer technique

Takenouchi, T., Ohtsuki, M., Miyashiro, D., Kunioka, Y., Yamada, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

472

1SC04 Molecular mechanism of oscillatory expression of the somite segmentation clock

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 188 KB

2004

473

1SC05 DNA Chips Experiments for Gene Expression Profiles and Molecular Diagnostics

Halperin, Avraham, Buhot, Arnaud, Zhulina, Ekaterina B.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 188 KB

2004

474

1SC06 Spatio-temporal structure in micrometer-scale systems

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 188 KB

2004

475

1P163 Factors determining the correlation between myocardial SPOC and heartbeat

Sasaki, D., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 270 KB

2004

476

1P164 Observation of binding of HMM molecules to an actin filament fixed on glass surface

Taguchi, Y., Hatori, K., Honda, H., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 270 KB

2004

477

1P165 Length dependence of sarcomeres against the mechanical stimuli in spontaneous oscillatory contraction (SPOC) of skeletal muscle

Shimamoto, Y., Suzuki, M., Yasuda, K., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

478

1P167 An establishment of human muscle actin expression system

Iwasa, M., Sano, KI., Maeda, K., Maeda, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

479

1P169 Structural and functional analysis of RCM-causing mutants of human cardiac troponin I

Yumoto, F., Lu, Q., Nagata, K., Morimoto, S., Tanokura, M., Ohtsuki, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 255 KB

2004

480

1P170 Molecular mechanics of masticatory muscle myosin

Ohnuki, Y., Kunioka, Y., Ohtsuki, M., Yamada, T., Saeki, Y., yanagisawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 255 KB

2004

481

1P171 Creation of Nano-Biomachine with Muscle Proteins

Shikinaka, K., Kakugo, A., Gong, Jian Ping, Osada, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 255 KB

2004

482

1P172 Effects of proteolytic treatments on the molecular structures in cardiac and skeletal myofibrils studied by AFM and SDS-PAGE

Akiyama, N., Ohnuki, Y., Saeki, Y., Kunioka, Y., Yamada, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 255 KB

2004

483

1P175 Conformational changes of smooth muscle heavy mero myosin, studied by X-ray solution scattering

Sugimoto, Y., Kondrashkina, Elena, Arata, T., Aihara, T., Takezawa, Y., Irving, Thomas C., Wakabayashi, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

484

1P176 Elucidation of molecular mechanism for the 'catch' state of invertebrate smooth muscle by electron cryo-microscopy

Mise, H., Yasunaga, T., Yoshio, M., Yamada, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

485

1P177 Acto-myosin(S1) chimera developed as a dynamic model of intermediate states

Siddique, S. P., Maruko, H., Miyazaki, T., Katayama, E., Uyeda, T.Q.P., Suzuki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 263 KB

2004

486

1P179 Neutron fiber diffraction of the thin filaments

Fujiwara, S., Matsumoto, F., Deshimaru, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 263 KB

2004

487

1P181 Role of myosin binding in the thin filament activation in skeletal muscle during normal contraction

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

488

1P182 Modeling X-ray analysis of a perturbed structure of the myosin filament and crossbridge disposition in the relaxed and contracting states

Oshima, K., Takezawa, Y., Sugimoto, Y., Irving, Thomas C., Wakabayashi, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

489

1P183 Mechanism of spontaneous oscillatory contraction studied by A-band motility assay system and regulatory proteins

Suzuki, M., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

490

1P187 Effects of polyols on the cross section of skinned fiber

Kimura, M., Suzuki, Y., Takagishi, K., Takemori, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

491

1P189 How does asymmetry of cyclobolaphiles effect on their assembly formation?

Shibakami, M., Goto, R., Miyoshi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

492

1P192 Stability of Giant Unilamellar Vesicles and Large-Unilamellar Vesicles of Liquid-Ordered Phase Membranes in the presence of Triton X-100

Tamba, Y., Tanaka, T., Yahagi, T., Yamashita, Y., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

493

1P193 Actin/Filamin A Gel in Giant Liposomes of Liquid-Ordered Phase Membrane

Sano, R., Ohashi, K., Ito, T., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

494

1P194 Interaction of magainin 2 with giant liposome

Tamba, Y., Masum, Shah Md., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

495

1P196 Investigation of the physical property on liposome suspension by FACS

Sato, K., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

496

1P198 Molecular dynamics simulation of GMl/cholesterol/phospholipid mixed membranes

Mori, K., Hata, M., Neya, S., Hoshino, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

497

1SD03 Molecular recognitions of the cell surface receotors between APC and T-cell

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

498

1P202 Effect of Positively-Charged Short Peptide on Stability of Cubic Phases of Monoolein-Dioleoylphosphatidic Acid Mixtures

Masum, Shah Md., Awad, Tarek S., Li, Shu Jie, Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 218 KB

english, 2004

499

1P203 PH Dependence of Effect of Peptides Interacting with Electricaly Neutral Membrane Interface on Stability of Cubic Phases of MO Membrane

Masum, Shah Md., Awad, Tarek S., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 218 KB

english, 2004

500

1P204 Formation of Cubic Phases from Large Unilamellar Vesicles of Monoolein/ Dioleoylphsphatidylglycerol Membranes Induced by Ca^

Awad, Tarek S., Masum, Shah Md., Sano, R., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 218 KB

english, 2004

501

1P205 Elucidation of native structure of ACTH(1-24) bound to DMPG/DMPC mixed lipid bilayers by solid state NMR

Nishimura, K., Myoga, H., Narita, M., Kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

502

Analysis of interaction between adrenocorticotropic hormone (ACTH) and DMPG/DMPC lipid bilayers by solid state NMR

Myoga, H., Nishimura, K., Narita, M., Kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

503

1P207 Analyses of interactions between somatostatin(SS-14) and neutral/cationic lipid bilayers by solid state NMR

Sasaki, J., Nishimura, K., Kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

504

1P208 Structure and dynamics of beta-endorphin bound to phospholipid bilayers by solid state NMR

Harada, A., Nishimura, K., Yokoyama, M., Kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

505

1P212 Lithographic micro-patterning of substrate-supported lipid bilayers

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

506

1P215 Controlling orientation of membrane proteins and its verification

Yamaguchi, N., Koyama, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 217 KB

2004

507

1P216 An attempt of peptide design based on N-terminal sequence of bacteriorhodopsin and fabrication of hybrid film of retinoic acid and peptide

Goto, K., Narumi, Y., Oishi, H., Tsujiuchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 217 KB

2004

508

1P217 A qualitative analysis of the properties of the hybrid film of dimyrstoylphosphatidylcholine and retinoic acid

Ito, M., Goto, K., Tsujiuchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

509

1P218 Structure of raft-model membrane and permeability of water studied by using solution neutron scattering

Hirai, M., Koizumi, M., Hirai, H., Kasahara, K., Kouhei, K., Suzumi, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

510

1P220 Observation of barotropic phase behavior of phospholipid-cholesterol binary bilayer membrane using fluorescent probe method

Tamai, N., Khammanivong, S., Uemura, M., Matsuki, H., Kaneshina, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

511

1P222 Atomic force microscopic observation of lipid membranes at high humidity II. : DMPC-cholesterol mixtures

Okamoto, J., Ema, K., Yao, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

512

1P226 Structure and thermal history dependant phase behavior of hydrated synthetic acylamino-phospholipid : DDPC

Takahashi, H., Okumura, Y., Sunamoto, J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

513

1P229 Interactions of Local Anesthetics with Model Biomembrane(2) : Effect of cholesterol

Matsuoka, K., Tanioka, Y., Hata, T., Satake, H., Matsuki, H., Kaneshina, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

514

1P231 DSC study of effects of melittin on lipid binary mixtures

Kodama, A., Ohki, K., Ohba, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

515

1P233 Analysis of molecular and physiological properties of visual pigments using cone pigment knock-in mice

Sakurai, K., Imai, H., Onishi, A., Chisaka, O., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

516

1P235 Binding and dissociation of chloride ion on group L photoreceptor

Morizumi, T., Kuwayama, S., Onishi, A., Imai, H., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

517

1P237 Analysis of retinal-opsin interaction in invertebrate-type rhodopsin having binding ability to agonist all-trans-retinal

Tsukamoto, H., Terakita, A., Koyanagi, M., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

518

1SD05 An aproach to determine the crystal structure of cytokine-receptor complex

Kuroki, R., Tamada, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

519

1SA53 Protein structure reconstruction : single particle analsis using electron microscopy

Ogura, T., Sato, C.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

520

1P241Origin of the vertebrate visual cycle system : II

Iwamoto, H., Horie, T., Okunou, K., Kusakabe, T., Tsuda, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

521

1P242 Identification of genes specifically expressed in rod or cone photoreceptor cells

Matsukawa, Y.S., Aman, Y., Tachibanaki, S., Kawamura, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

522

1P243 Cloning and characterization of chicken melanopsin

Torii, M., Okano, T., Nakamura, A., Fukada, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

523

1P244 Study of reaction dynamics of octopus rhodopsin

Inoue, K., Matsumoto, K., Tsuda, M., Terazima, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

524

1P245 Purification and characterization of activated GPCR : octopus acid metarhodopsin

Matsumoto, K., Ashida, A., Tsuda, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

525

1P247 Structural changes upon retinal photo-isomerization in squid retinochrome at 77-270 K studied by FTIR spectroscopy

Furutani, Y., Terakita, A., Shichida, H., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

526

1P248 One-way proton transport in bacteriorhodopsin is modulated by changes in the interaction of the Schiff base with water molecules

Maeda, A., Gennis, Robert B., Balashov, Sersei P., Ebrey, Thomas G.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

527

1P250 Signal assignments and Analysis of local motion in ^C labeled bacteriorhodopsin as studied by high resolution solid state NMR

Ohmine, M., Kawamura, I., Yamaguchi, S., Nishimura, K., Tuzi, S., Saito, H., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

528

1P251 Acidic and Alkaline Forms of Bacteriorhodopsin

Okumura, H., Murakami, M., Kouyama, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

529

1P256 Low-temperature FTIR spectroscopy of Anabaena sensory rhodopsin

Kawanabe, A., Furutani, Y., Juneg, Kwang-Hwan, Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

530

1P258 Interaction between active state of pharaonis phoborhodopsin and its transducer protein

Sudo, Y., Nishihori, T., Iwamoto, M., Shimono, K., Kamo, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

531

1P260 Molecular recognition mechanism of the interaction between pharaonis phoborhodopsin and its transducer protein

Yamabi, M., Hasegawa, C., Sudo, Y., Iwamoto, M., Shimono, K., Kamo, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

532

1P262 Analysis of the interaction between pharaonis phoborhodopsin and its cognate transducer in the cytoplasmic side by Solid-State NMR

Kawamura, I., Yoshida, H., Ikeda, Y., Sudo, Y., Iwamoto, M., Shimono, K., Saito, H., Kamo, N., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

533

1P264 Quantum Chemical Study on the Spectral Tuning Mechanism of Retinal Proteins

Sakurai, M., Saito, S., Miyagawa, Y., Okada, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

534

1P266 Photoreaction mechanism of Neurospora rhodopsin studied by low-temperature FTIR spectroscopy

Sumii, M., Furutani, Y., Bezerra Jr., Arandi G., Waschuk, Stephen, Brown, Leonid S., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

535

1P267 Resonance Raman Investigation of (6-4)Photolyase : FAD Cofactor Is in a Strong Hydrogen-bonding Environment

Li, Jiang, Uchida, T., Todo, T., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

536

1P269 Reconstitution of the isotope-labeled FMN chromophore into phototropin

Nozaki, D., Iwata, T., Sato, Y., Sato, K., Nishina, Y., Shiga, K., Tokutomi, S., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

537

1P271 Difference of photoreactions between LOV1 and LOV2 domains in Adiantum phy3

Iwata, T., Nozaki, D., Tokutomi, S., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

538

1P276 Trapping of a Light-induced Primary Intermediate at 10 K in Photocycle of a blue light sensory BLUF Protein Tl10078

Fukushima, Y., Okajima, K., Shibata, Y., Ikeuchi, M., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

539

1P278 Photocycle Mechanism of A Blue Light Photoreceptor AppA by Raman Spectroscopy

Sano, R., Unno, M., Masuda, S., Ono, T., Yamauchi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

540

1P279 Spectroscopic properties for an interaction between the blue-light photoreceptor, AppA and PpsR

M., Makoto, Fukusumi, H., Yamazaki, Y., Kamikubo, H., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

541

1P280 Protein Structural Changes during the formation of M Intermediate in Photoactive Yellow Protein : Ultraviolet Resonance Raman Study

Unno, M., El-Mashotoly, Samir F., Kumauchi, M., Hamada, N., Tokunaga, F., Yamauchi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

542

1SA54 Development of Magnetic Resonance Imaging Micro-scope and Visualization of Magnetic Information in Space

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

543

1SB51 Folding Mechanism of Proteins

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

544

10.2142/biophys.44._s12_

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 64 KB

2004

545

10.2142/biophys.44._s9_

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 225 KB

2004

546

10.2142/biophys.44.app18

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 293 KB

2004

547

1P298 Boolean Network with Probabilistic Response Corresponding to Real-valued Inputs

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 230 KB

2004

548

1P310 A reaction-diffusion model for signal-transfer system based on fluctuation dynamics

Toshi, M., Kaneko, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

549

1P318 Crystallization of a new enzyme, O-phosphoserine sulfhydlylase, with hyperthermostability

Ataka, M., Mino, K., Ishikawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 158 KB

2004

550

1SB56 Interaction between proteins and water in time domain

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

551

1SC51 Classical conditioning of earthworm by vibration and light

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

552

2P004 Crystal Structure of HI1472, Iron compound binding protein from Heamophilus Influenzae

Kishida, H., Nishino, A., Unzai, S., Roper, David I., Tame, Jeremy R. H., Park, S.-Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

553

2P017 The Study of Interaction between Gelsolin and Amyloid β-peptide by NMR

Fukasawa, H., Mizuguchi, M., Nabesima, Y., Nakamura, T., Matsuura, A., Sugaya, T., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

554

2P027 A molecular dynamics simulation study of the origin of the mechanical strength of bovine carbonic anhydrase

Ohta, Satoko, Afrin, Rehana, Alam, Mohammad Taufiq

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

555

2P032 View of fold universe generated from 50-residue segments taken from proteins

Ito, J., Ikeda, K., Higo, J., Maruyama, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

556

2P048 Molecular mechanism of increase of the hydrophobic effect in aqueous urea solutions

Ishizuka, T., Shimizu, S., Terada, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

557

2P059 Crystallization of the TsuBCD complex

Numata, N., Fukai, S., Ikeuchi, Y., Suzuki, T., Nureki, O.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

558

2P072 Differences in heme structure among Hemoglobins M revealed by resonance Rarnan spectroscopy

Jin, Y., Nagai, M., Nagai, Y., Imai, K., Nagatomo, S., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 228 KB

2004

559

2P074 UV Resonance Raman Studies on the Trigger of Structural Changes of Myoglobin upon Ligand Binding

Gao, Y., Pal, Biswajit, Hayashi, T., Harada, K., Nakagawa, T., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 245 KB

english, 2004

560

2P081 Heme structure and drug binding affinities of human CYP2C9 : Effect of SNPs

Uno, T., Watanabe, R., Shigetomi, T., Tomisugi, Y., Ishikawa, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

561

2P088 Reconstitution of mitochondrial cytochrome bc_1 complex with recombinant iron-sulfur protein

Miki, T., Sasuga, Y., Harada, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

562

2P090 Construction of the expression system for bacterial aa_3-type cytochrome c oxidase

Yukutake, Y., Shimokata, K., Katayama, Y., Suematsu, M., Muramoto, K., Yoshikawa, S., Shimada, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

563

2P098 Diffusional motion along DNA molecules induced by RecA protein

Kimura, Y., Kinebuchi, T., Kabata, H., Kurumizaka, H., Washizu, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

564

2P101 Structure and function of feast/famine regulatory proteins : 3.interaction between the FL11 protein and the fl11 promoter

Yokoyama, K., Koike, H., Ishijima, S.A., Clowney, L., Kikuchi, T., Suzuki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

565

2P118 Latest Developments in ProNIT : Thermodynamic Database for Protein-Nucleic Acid Interactions

Kumar, Shaji M.D., Prabakaran, Ponraj, Uedaira, H., Gromiha, Michael M., Kitajima, K., Sarai, A.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 222 KB

english, 2004

566

2SA01 Atomic model of depolymerization mechanism of micro-tubules by a kinesin superfamily protein, KIF2C

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 254 KB

2004

567

2P123 Quantitative Measurement of thermal denaturation efficiency of double stranded DNA immobilized on chip surface

Okano, K., Orita, K., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

568

2P126 Purification and characterization of the flagellar basal body of Azospririllum brasilence

Saito, T., Mizusaki, H., Aizawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 257 KB

2004

569

2P127 The flagellar moter of tethered cells

Mashimo, T., Yamaguchi, S., Aizawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 257 KB

2004

570

2P129 Crystal structure of cytoplasmic domain of FlhA, a subunit of the flagellar export apparatus of Salmonella

Saijo-Hamano, Y., Imada, K., Minamino, T., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

571

2P131 Analysis of interactions between flagellin and its export chaperon FliS from Salmonella typhimurium - part 2

Furukawa, Y., Samatey, Fadel A, Matsunami, H., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

572

2P132 The role of the N-terminal domain of FliK, a hook-length control protein in export specificity switching of the flagellar export apparatus

Minamino, T., Moriya, N., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

573

2P134 Functional analysis of Salmonella flgE mutants that produce short hooks with filaments attached

Moriya, N., Minamino, T., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

574

2P137 Analysis of fleN flagellar number mutant of Pseudomonas aeruginosa

Shibata, S., Aizawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

575

2P148 Analysis of yeast prion dynamics in a single cell

Ayano, S., Noma, S., Yoshida, M., Taguchi, H., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

576

2SA03 Regulation of Microtubule Dynamics by Plus-End-Binding Proteins within Cells

Mimori-Kiyosue, Y

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 228 KB

2004

577

2SB01 Specific localization of inwardly rectifying K+ channels and its molecular basis in the vectorial transport of epithelial and glial cells

Hibino, H., Kurachi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 228 KB

2004

578

2P161 Directional control of cell motility on line-patterned substrates

Asano, Y., Hiratsuka, Y., Uyeda, T.Q.P.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

579

2P164 Positive feedback mechanisms of PTEN localization in Dictyostelium cells

Matsuoka, S., Ueda, M., Devreotes, Peter N., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

580

2P165 Reversal of chemotactic signaling in a lipid metabolism mutant

Matsuoka, S., Ueda, M., Kuwayama, H., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

581

2P167 Noisy signal amplification in ultrasensitive signal transduction network

Shibata, T., Fujimoto, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

582

2P177 Analysis of translational diffusion of GFP in cell by fluorescence correlation spectroscopy

Terada, N., Tadakuma, H., Ishihama, Y., Zako, T., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 225 KB

2004

583

2P191 ER-to-Golgi vesicular transport is dependent on the assembly/disassembly of ER exit sites

Yamauchi, S., Kano, F., Tanaka, A.R., Kondo, H., Murata, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 277 KB

2004

584

2SB03 Mechanisms of apical and basolateral sorting of heterodimeric amino acid transporters

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

585

2P205 Molecular mechanism of mast cell activation-induced neuronal response

Suzuki, R., Furuno, T., Nakanishi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 248 KB

2004

586

2P211 B-cell differentiation induced by NADPH oxidase

Suzuki, T., Hiraoka, W.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 216 KB

2004

587

2P218 The mechanism for the regulation of degranulation by cornplexin in mast cells

Sakiyama, H., Tadokoro, S., Nakanishi, M., Hirashima, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

588

2P224 The spider toxin GsMTx-4 inhibits stretch-activated big Kca channel through the modification of voltage gating mechanism

Tang, QY., Naruse, K., Sachs, Frederick, Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

589

2P225 A novel method for forming bilayer membranes : An approach to development of biosensors

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

590

2P229 Effect of arginine for Na^+-driven flagellar motor of alkalophilic Bacillus

Atsumi, T., Yoshimura, F., Sugiyama, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

591

2SC04 Regulation of Light Signaling in Rod Cells by G-protein βγ Complex

Kassai, H., Aiba, A., Nakao, K., Nakamuta, K., Katsuki, M., Xiong, Wei-Hone, Yau, Kine-Wai, Imai, H., Shichida, Y., Takao, T., Okano, T., Fukada, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

592

2P241 A high-resolution solid-state NMR study of the PRIP-1 PH domain at the lipid bilayer surface

Tanaka, H., Yagisawa, H., Hirata, M., Tuzi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

593

2P243 The role of cyclophilin D on persistence of mitochondrial membrane potential

Suzuki, H., Machida, K., Higashino, K., Fujita, C., Osada, H., Ohta, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

594

2P249 FTIR analysis on the proton release reactions in the photosynthetic water oxidizing complex

Suzuki, H., Sugiura, M., Noguchi, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

595

2P255 Electron transfer in reaction center of Heliobacterium modesticuldum studied by cryogenic ESR spectroscopy

Miyamoto, Ryo, Oh-oka, Hirozo, Mino, Hiroyuki, Itoh, Shigeru

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

596

2P257 Structure Analysis of Chlorosomal Bacteriochlorophyll c Aggregate by Solid-State NMR

Egawa, A., Akiba, K., Mizoguchi, T., Hara, K., Kakitani, Y., Koyama, Y., Fujiwara, T., Akustu, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

597

2P258 Excitation relaxation processes of carotenoids deriving from a purple photosynthetic bacterium

Higuchi, M., Mimuro, M., Yokono, M., Murai, Y., Oomae, A., Akimoto, S., Yamazaki, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

598

2P274 Analysis of protein's surface profile through simulation of its quick-freeze deep-etch replica image

Kimori, Y., Oguchi, Y., Ichise, N., Baba, N., Katayama, E.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 323 KB

2004

599

2P278 Development of the molecular interaction analysis system using microbeads array

Sasuga, Y., Ohara, O., Tani, T., Harada, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

600

2P281 Mechanical Measurement on Green Fluorescent Protein with Atomic Force Microscopy

WANG, Tong, Nakajima, K., Hara, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

601

2P284 Fluorescence colocalization imaging of two single-molecules in living cells

Koyama-Honda, I., Ritchie, Ken, Fujiwara, T., Iino, R., Murakoshi, H., Kasai, RS., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

602

2P299 Development of a molecular memory based on surface-bound hairpin DNA

Hatano, Y., Takinoue, M., Suyama, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 229 KB

2004

603

2P313 Control of the synchronization of the beating in the cardiac myocytes by excitable or nonexcitable cells

Kaneko, T., Kojima, K., Suzuki, I., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 316 KB

2004

604

2P315 Development of agarose-gel microfabrication techniques as methods for morphological control of cultured cells

Moriguchi, H., Hattori, A., Kaneko, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 316 KB

2004

605

2P316 Development of the single-cell-based high-speed buffer exchange method using laminar flow in microfluidic pathways and centrifugal force

Orita, K., Hattori, A., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 316 KB

2004

606

2P317 Design and creation of light responsible fusion protein

Fujimoto, S., Yamazaki, Y., Kamikubo, H., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 204 KB

2004

607

3P003 Observation of the Structural Changes of Alanyl-alanine crystal studied by terahertz time-domain spectroscopy

Yamaguchi, M., Yamarnoto, K., Tani, M., Hangyo, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

608

3P008 Mass spectrometry on H/D exchange of poly-L-glutamic acid in helix form

Yamamoto, T., Izumi, S., Gekko, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

609

3P026 The study on the folding of canine milk lysozyme

Nakao, M., Maki, K., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

610

3P027 Adsorption behavior of Canine milk lysozyme(CML) in Molten Globule state onto Hydroxyapatite

Shimamoto, S., Aizawa, T., Yasui, M., Yamamoto, H., Demura, M., Nitta, K., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

611

3P028 Volumetric behavior of the native and molten globule state of canine milk lysozyme

Watanabe, M., Aizawa, T., Demura, M., Nitta, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

612

3P035 Site-specific twist of peptide bond in human lysozyme by localized hydrogen or hydration water observed by neutron crystallography

Chiba, K., Matsui, T., Chatake, T., Ohhara, T., Ostermann, Andreas, Tanaka, I., Yutani, K., Niimura, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

613

3SA02 Standardization of microarray data and a gene expression database

Tateno, Y., Ikeo, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 215 KB

2004

614

3P053 Interaction of the N-terminal domain of Escherichia coli heat shock protein ClpB and protein aggregates during chaperone activity

Tanaka, N., Tani, Y., Hattori, H., Tada, T., Kunugi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 213 KB

2004

615

3P069 Understanding principles of protein structure from structure prediction

Chikenji, G., Fujitsuka, Y., Park, S.J., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

616

3P077 Increase of water residence time in the first hydration layer of protein in aqueous solution with ectoine

Yu, I., Nagaoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 257 KB

2004

617

3SB02 Enzyme reaction mechanism analyzed by atomic resolution crystallography

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

618

3P086 Dynamical structure reproduction of alpha, alpha/beta, and beta proteins

Sasaki, T.N., Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

619

3P098 Correlation of protein dynamics with the elastic incoherent neutron scattering profile

Tokuhisa, A., Jochi, Y., Kamikubo, H., Nakagawa, H., Kitao, A., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

620

3P111 Foldability, enzymatic activity, and interacting ability of barnase mutants obtained by permutation of secondary structure units

Tsuji, T., Yanagawa, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

621

3SB07 Studies on cytochrome c oxidase by site-directed mutagenesis

Shimokata, K., Katayama, Y., Shimada, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

622

3SB08 Theoretical studies on proton and electron transfers in proteins

Shiraishi, K., Kamiya, K., Oshiyama, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

623

3P138 Structural analysis of H^+-ATPase beta subunit by segmental isotope labeling and residual dipolar couplings

yagi, H., Tsujimoto, T., Yamazaki, T., Yoshida, M., Akutsu, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

624

3P139 Stepwise rotation of V_1ATPase

Imamura, H., Funamoto, S., Yoshida, M., Yokoyama, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

625

3P143 Highly coupled ATP synthesis by single Fl molecule

Rondelez, Yannick, Nakashima, T., Tresset, Guillaume, Yamada, Y., Fujita, H., Takeuchi, S., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

626

3P144 F1 modulates the rate of ATP hydrolysis reaction depending on the angle of gamma

Watanabe, R., Shimabukuro, K., Yoshida, M., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

627

3P147 Site occupancy and ATP hydrolysis activity of F_1-ATPase without noncatalytic nucleotide binding site

Shimo-Kon, R., Muneyuki, E., Sakaki, N., Adachi, K., Furuike, S., Itoh, H., Yoshida, M., Kinosita Jr., K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

628

3P150 Direct measurement of potential of nucleotide free F_1-ATPase

Hirono-Hara, Y, Kuroda, A, Noji, H

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

629

3P158 Processive movement of myosin V on a subtilisin-cleaved actin filament

Kubota, H., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

630

3P162 Calmodulin light chain is essential for the large 35 nm step of higher plant myosin XI

Tominaga, M., Kojima, H., Yokota, E., Nakamori, R., Kuradomi, T., Shimmen, T., Oiwa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

631

3P179 Nucleotide-dependent structural changes of microtubules complexed with Kar3

Hirose, K., Akimaru, E., Endow, Sharyn, Amos, Linda

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

632

3P186 Steric entropy barriers directing Brownian stepping movement of kinesin

Taniguchi, Y., Nishiyama, M., Ishii, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 276 KB

2004

633

3P188 Structural Study of Dynein binding to microtubule and comparison with Kinesin

Mizuno, N., Toyoshima, Y.Y., Kikkawa, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 276 KB

2004

634

3P193 LIS1 and NUDEL cooperatively regulate motor activity of cytoplasmic dynein

Toba, S., Toyo-oka, K., Hirotsune, S., Toyoshima, Y.Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

635

3P198 The effect from minus-charged region of the microtubule and 1D-Brownian motion along a microtubule of the Chlamydomonas inner-arm dynein c

Kikumoto, M., Nakamori, R., Sakakibara, H., Oiwa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

636

3P199 Transverse stiffness distributions along sea urchin sperm flagella studied by AFM

Kunioka, Y., Hamazaki, A., Kamimura, S., Yamada, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

637

3P202 Establishment of Mycoplasma mobile triton model and identification of energy source for gliding motility

Uenoyama, A., Miyata, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

638

3P216 Direct effects of corticosterone on mitochondrial electron transfer system

Ichikawa, F., Teratani, T., Aochi, K., Ohta, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

639

3P217 Electrophysiological analysis of the effect of neurosteroids on the synapses in rat hippocampus

Oishi, Y., Hojo, Y., Komatsuzaki, Y., Sonoki, Y., Nakajima, K., Nakanishi, H., Kimoto, T., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

640

3P220 Activin A acutely increases dendritic spine density in rat hippocampus

Mitsuhashi, K., Mukai, H., Hojo, Y., Asashima, M., Fukui, A., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

641

3P225 An RN A-interacting protein, SYNCRIP (hnRNP Q1/NSAP1), is a component of mRNA granules transported on microtubules in neuronal dendrites

Bannai, H., Fukatsu, K., Mizutani, A., Natsume, T., Iemura, S., Ikegami, T., Inoue, T., Mikoshiba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

642

3P229 Sample preparation and structural analysis of CNR/Protocadherin alpha ectodomain

Morishita, H., Shibata, N., Umitsu, M., Murata, Y., Ikegami, T., Yagi, T., Higuchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

643

3SD03 Structure and mechanism of drug transport by P-glycoprotein

Omote, H., Al-Shawi, Marwan K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

644

3P241 Presynaptic representation and postsynaptic extraction of sensory parameters for directional tuning property in the cricket cereal system

Ogawa, H., Oka, K., Miller, John P.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

645

3P244 Multiple sequence learning in theta phase coding model in T-maze alternation task

Wagatsuma, H., Yamaguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

646

3P248 Searching for the central pattern generator of the earthworm locolotion

Shimoi, T., Mizutani, K., Kitamura, Y., Ogawa, H., Oka, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 288 KB

2004

647

3P255 Dyamics in Limited Universe and Hidden Property

Sasai, K., Gunji, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

648

3P258 Origin and evolution of the genetic code and most primitive mRNAs : Further evidence for the poly-tRNA theory

Saito, D., Uriu, K., Murayama, Y., Ohshima, M., Sunaga, R., Ohnishi, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

649

3P259 In situ UV-visible spectroscopy for the investigation of the hydrothermal origin of life

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

650

3P265 ProMode - Visualization of knowledge information in normal mode animations

Wako, H., Otsuka, M., Tomizawa, Y., Kato, M., Endo, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

651

3P266 Identification of rigid domains by using complete graph and application to SCOP

Mashiko, R., Wako, H., Yamana, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

652

3P275 Analysis of transmembrane helices and mitochondrial membrane proteins for improving membrane protein prediction system SOSUI

Tsuji, T., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

653

3P280 Prediction of interafaces for oligomerizations of G-protein coupled receptors

Nemoto, W., Toh, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 233 KB

2004

654

3SA52 New approach for protein engineering

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

655

3SA53 Protein crystallization by complexation with an antibody fragment

Tamada, T., Kuroki, R.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

656

3P283 Effects of alternative splicing on protein 3D structures

Shionyu, M., Yura, K., Hagino, K., Hijikata, A., Hiroshima, Y., Nakahara, T., Eguchi, T., Shinoda, K., Yamaguchi, A., Takahashi, K., Itoh, T., Imanishi, T., Gojobori, T., Go, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

657

3P291 Evolutional model of power law behavior in transcriptome and gene family

Ogasawara, O., Kubota, I., Okubo, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

658

3P293 Origin and evolution of photosynthetic reaction center and archeal/bacterial/fungal opsins

Ishimoto, Y., Murayama, Y., Saito, D., Uriu, K., Yamazaki, M., Furuichi, N., Ohnishi, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 267 KB

2004

659

3P295 Force Field of Individual Protein Molecules Under X-ray Radiation

Sasaki, Y.C., Okumura, Y., Miyazaki, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 267 KB

2004

660

3P298 Single molecule surface enhanced Raman imaging and spectroscopy with silver nano particles

Maruyama, Y., Ishikawa, M., Futamata, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 267 KB

2004

661

3P300 Single hydrogen bonds of DNA base pairs detected by intermolecular force microscopy

Hiroshima, M., Tokunaga, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 267 KB

2004

662

3P302 Observation of nanobubbles on Au(111) surface

Kameda, N., Nakabayashi, S., Otuka, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

663

3P314 Scattering and absorption properties in tissues at the 1μm NIR region

Nishimura, G., Tamura, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 274 KB

2004

664

3SB51 Elementary Processes in the Rotation of H^+-ATP Synthase F_1

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

665

10.2142/biophys.44.s275_2

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 144 KB

2004

666

LS15-02 Advanced Computational Techniques for Protein-X Docking : LigandFit and ZDOCK/RDOCK

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 136 KB

english, 2004

667

10.2142/biophys.44.s285

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 1.26 MB

english, 2004

668

1P019 Structural characterization of GGA (VHS-GAT) using x-ray solution scattering

Kamikubo, H., Murasaki, Y., Kawasaki, M., Kato, R., Nakayama, K., Wakatsuki, S., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

669

1P024 Crystal structure of N-acetylglucosaminephosphate mutase from Candida albicans

Nishitani, Y., Maruyama, D., Nonaka, T., Kita, A., Fukami, T.A., Sogabe, S., Mio, T., Yamada-Okabe, H., Yamada-Okabe, T., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

670

1P043 X-ray structural analysis of a barnase-barstar complex. Comparative study of protein structures and dissociation constants

Urakubo, Y., Ikura, T., Ito, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

671

1P053 Proteomic Structural Analysis based on Molecular Dynamics Simulations : Protein-Protein Interactions of Ras-Raf and Ras-RalGDS com

Futatsugi, N., Shirouzu, M., Suenaga, A., Okimoto, N., Narumi, T., Ebisuzaki, T., Yokoyama, S., Taiji, M., Konagaya, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

672

1P066 Molecular mechanism of protein degradation by AAA protease FtsH

Okuno, T., Fukunaga, S., Yamanaka, T., Ogura, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

673

1P070 Detection of the ice-binding manner of antifreeze proteins by using Green Fluorescent Protein(GFP) labeling technique

Miura, K., Tsuda, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

674

1SB05 Observation of conformational changes of kinesin walking along microtubules using single molecule FRET technique

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

675

1P084 NOESY-HSQC simulation on accuracy o protein NMR structures

Ikeya, T., Ito, Y., Shimizu, K., Noguchi, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

676

1P090 Detection of bovine prion protein by fluorescence correlation spectroscopy

Fujii, F., Sakata, H., Ueno, M., Yanagiya, T., Tamura, M., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 333 KB

2004

677

1P091 Fluorescence spectroscopic studies on the mechanism of protein crystallization

Nishimoto, E., Shinkai, A., Yamashita, K., Yamashita, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 333 KB

2004

678

1P093 Specific Interactions between Enzyme-Substrate Complexes Depending on Substrate Chain Length

Suzuki, T., Zhang, Y., Koyama, T., Kurihara, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

679

1P097 Development of effective algorithms for three dimensional reconstruction from electron microscopic images of asymmetric protein

Ueyama, T., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

680

1P098 Image processings of protein molecules in electron microscopy

Ueno, Y., Yamamoto, M., Kawasaki, K., Takahashi, K., Sato, C.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

681

1P103 Resonance Raman spectrum of mitochondrial complexI

Sugiyama, H., Ogura, T., Nakatubo, R., Terada, H., Shinzawa-Itoh, K., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

682

1P104 Identification of binding sites of respiratory chain oxidase with cytochrome c by electron cryo microscopy

Kakihisa, D., Fujishima, H., Sakamoto, J., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

683

1P112 The effect of Triton X-100 to the Schiff base and two dimensional crystalline structure of Natronobacterium pharaonis halorhodopsin

Sasaki, T., Demura, M., Aizawa, T., Nitta, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

684

1P120 UV resonance Raman study of a model complex of the CuB site of cytochrome c oxidase

Nagano, Y., Kitagawa, T., L., Jin-Gang, Naruta, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

685

1SC03 On the roles of transcription/translation processes for circadian rhythm generation in cyanobacteria

Iwasaki, H., Tomita, J., Kondo, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

686

1P123 Physicochemical study for survive mechanism of polypedilum vanderplanki against water stress using multi-channel micro FTIR

Akao, K., Kosyoubu, J., Furuki, T., Watanabe, M., Okuda, T., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

687

1P137 Characterization of mutant actin prepared from Dictyostelium Discoidium

Miura, H., Oguchi, Y., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

688

Ca^-binding to site IV and TnI-binding of body-wall muscle troponin C are essential for development in Caenorhabditis elegans

Takaya, T., Terami, H., Sohda, M., Iio, T., Kagawa, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

689

1P151 Functional analysis of C-terminal region in TnT for Ca-regulatory interaction

Oda, H., Kimura, C., Miki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 220 KB

2004

690

1P156 Unusual inhibition of TnI-fragments on the thin filament motility in vitro

Funamoto, Y., Mizuno, H., Honda, H., Hatori, K., Matuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 226 KB

2004

691

1P157 The Effect of Mutation at Troponin Binding Domain on Thermal Stability of Tropomyosin Obserbed by DSC

Sakiyama, K., shitaka, Y., Sakuma, A., Miki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

692

1P162 Amplification of longitudinal fluctuations of an actin filament on Chara myosin molecules

Hatori, K., Okeno, Y., Honda, H., Shimada, K., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 270 KB

2004

693

1P173 Conformational changes of oyster myosin induced by divalent cations

Taniguchi, M., Okada, T., Oonishi, H., Yazawa, Y., Yamane, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

694

1P178 Visualization of a-helix in actin filament by single particle analysis of electron spectroscopic cryo-microscopy

Narita, A., Yasunaga, T., Wakabayashi, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 263 KB

2004

695

1P186 Axial profiles of the x-ray meridional reflections caused by the extension of actin filaments during force generation of skeletal muscles

Takezawa, Y., Satoi, N., Kobayashi, T., Oshima, K., Sugimoto, Y., Wakabayashi, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

696

1P190 Approaches toward microscopic to macroscopic investigation on the biomembrane interface

Kikuchi, J., Nishihara, T., Sasaki, H., Fukuzawa, S., Tachibana, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

697

1P195 Efficient formation of giant liposomes through the hydration of sugar-containing neutral phospholipid films

Tsumoto, K., Fujino, A., Sakamoto, D., Yoshimura, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

698

1P201 Osmotic stress-X-ray diffraction study of ganglioside GM1/cholesterol mixture

Abe, S., Takahashi, H.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 218 KB

english, 2004

699

1P209 Structural elucidation of γ_2-melanocyte stimulating hormone (γ_2-MSH) bound to DMPC and DMPG lipid bilayers by solid state NMR

Yoshida, S., Nishimura, K., kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

700

1P213 The lateral polarisation of lipid membrane surface dipoles by adsorbed ions

Levadny, Victor, Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 217 KB

2004

701

1P221 Liposome formation from phospholipid dry films

Hishida, M., Seto, H., Yoshikawa, K., Kaewsaiha, Ploysai, Matsuoka, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

702

1P223 Synthesis and characterization of branched model lipids(2) : Effects of methyl branches on lamellar structures

Komatsu, H., Baba, T., Takagi, T., Kanamori, T., Sakai, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

703

1P232 Specific Interaction of Bovine Lactoferricin with Acidic Phospholipid Bilayers and Elucidation of Antimicrobial Activity

Umeyama, M., Nishimura, K., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

704

1P234 Formation of opsin and decay of meta-intermediates of rhodopsin in the rod outer segment membrane of knock-in mice

Imai, H., Kuwayama, S., Onishi, A., Morizumi, T., Chisaka, O., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

705

1P236 Brownian motion of rhodopsin on rod photoreceptor discmembranes

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

706

1P252 In vivo observation of light-induced proton pumping of H. salinarum by using time-resolved fluorometry

Umezawa, T., Ohtani, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

707

1P255 Anion-dependent vibration modes of internal water molecules and the retinal schiff base in pharaonis halorhodopsin

Muneda, N., Shibata, M., Sasaki, T., Shimono, K., Demura, M., Kamo, N., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

708

1P259 Amino acid residues regulating the color among archaeal rhodopsins

Shimono, K., Sudo, Y., Iwamoto, M., Kamo, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

709

1P261 Analysis of the interaction between pharaonis phoborhodopsin and its transducer protein, HtrII, by FTIR spectroscopy

Kamada, K., Furutani, Y., Sudo, Y., Shimono, K., Kamo, N., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

710

1P265 SAC-CI Theoretical Study of the Opsin Dependence of Retinal Protein

Fujimoto, K., Hasegawa, J., Hayashi, S., Nakatsuji, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

711

1SB52 A powerful driving force in protein folding

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

712

10.2142/biophys.44._s13__2

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 946 KB

english, 2004

713

10.2142/biophys.44._s27_

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 84 KB

2004

714

10.2142/biophys.44._s30_

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 4.55 MB

english, 2004

715

1P282 Role of Amino Acid Residues in Met100 Loop of Photoactive Yellow Protein

Harigai, M., Imamoto, Y., Yamazaki, Y., Kamikubo, H., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

716

1P297 Relations between network topologies and degrees of self interaction proteins in evolution of yeast protein-protein interaction network

Hase, T, Ogishima, S, Suzuki, Y, Nakagawa, So, Tanaka, H

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 230 KB

2004

717

2P003 Ligand binding mechanism of human Cytoglobin based on X-ray crystal structure

Makino, M., Sugimoto, H., Sawai, H., Kawada, N., Yoshizato, K., Shiro, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

718

2P018 The structural analysis of polyglutamine tract binding protein-1 by NMR spectroscopy

Takahashi, M., Mizuguchi, M., Nakamura, T., Okazawa, H., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

719

2P024 Raman and Raman Optical Activity Spectra of Flagellar filaments of Salmonella

Uchiyama, T., Sonoyama, M., Hamada, Y., Oosawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 230 KB

2004

720

2P025 Cell-free exnression of prion protein and the structural study using high pressure fluorescence spectroscopy

Gaikwad, Jyoti U., Sasaki, K., Komabayashi, H., Morimoto, K., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

721

1SC55 Object representation by structural description in brain

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

722

2P051 An analysis of conformational change of a protein upon binding to ligand by multicanonical MD

Terada, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

723

2P084 Coordination Structure of the Heme-complex of Cyanobacterial Heme Oxygenase, Syn HO-1

Toyoshima, Y., Xhong, Z., Oda, K., Sugishima, M., Yoshida, T., Ogura, T., Fukuyama, K., Migita, C. T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

724

2P093 Structural refinement of the NO- and CO-coordination in cytochrome c oxidase in the reduced state

Muramoto, K., Aoyama, H., Ishida, K., Kurauchi, T., Aonami, S., Yamashita, E., ShinzawaItoh, K., Tsukihara, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

725

2P099 Crystal Structures of the Catalytic Domains of Pseudouridine Synthases RluC and RluD from Eschericia coli

Mizutani, K., Machida, Y., Unzai, S., Park, S.-Y., Tame, Jeremy R.H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

726

2P104 The higher order structure of circular DNA : Scaling analysis on the AFM data

Araki, S., Nakai, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

727

2P107 DNA Measurements by Using Fluorescence Correlation Spectroscopy and Two-Color Fluorescence Cross Correlation Spectroscopy

Takagi, T., Tamura, M., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 248 KB

2004

728

1SD55 Integration of structural information and genomic information of a novel cyanobacterirum

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 254 KB

2004

729

2P124 DNA folding induced by basic oligopeptides

Morita, H., Hazemoto, N., Akitaya, T., Murata, S., Yoshikawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

730

2P135 Mechanism of flagellar hook bending flexibility revealed by molecular dynamic simulation of protofilament extension and compression

Samatey, Fadel, Kitao, A., Imada, K., Matsunami, H., Nagashima, S., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

731

2P147 Quantitative approach to the dynamics of energy metabolism within single E. coli cells

Umehara, S., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

732

2P150 Polymerization and depolymerization dynamics of actin filaments : Regulation by HMM

Matsunawa, E., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

733

2P184 Single fluorescent molecule tracking of MARCKS on and near the cytoplasmic surface of the cell membrane

Iwasawa, K., Kajikawa, E., Koyama-Honda, I., Kasai, R., Ritchie, Ken, Miwa, Y., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

734

2P187 Stimulation-dependent remodeling of synapses : analysis by imaging NMDA receptor dynamics

Yoshida, H., Nakada, C., Hasegawa, R., Urushido, T., Umeda, T., Okabe, S., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

735

2P210 Chemical and biological properties of cell growth inhibitor derived from spinal cord(2)

Imafuku, C., Emoto, Y., Tawada, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 216 KB

2004

736

2P231 Expression of mechanosensitive channel MscL with cell-free system

Yoshimura, K., Nomura, T., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

737

2P235 Characterizations of heme transport in animal cells

Nara, M., Sato, M., Shiro, Y., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

738

2P242 Identification of a Vibrio cholerae chemoreceptor-like protein Mlp24 involved in taxis to serine and other amino acids

Ito, Y., Hyakutake, A., Nishioka, N., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

739

2P248 Inelastic tunneling from bacteriopheophytin to the primary quinone in bacterial photosynthetic reaction center

Nishioka, H., Kawatsu, T., Kimura, A., Yamato, T., Kakitani, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

740

2P259 Formation of Chl d from Chl a in aqueous acetone in the presence of Papain

Koizumi, H., Watanabe, S., Gotoh, T., Itoh, Y., Akiyama, M., Miyashita, H., Tushiya, T., Miumuro, M., Yamashita, T., Kobayashi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

741

3P011 Expression of thermophilc hydrogen-oxidizing bacterium Hydrogenobactor thermophilus cytochrome c552 in Escherichia coli and its stability

Oikawa, K., Nakamura, S., Takayama, S., Hasegawa, J., Kobayashi, Y., Yamamoto, Y., Uchiyama, S., Sambongi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

742

3P037 pH-dependent conformational change of equine beta-lactoglobulin

Ohkouchi, M., Nagashima, K., Yamada, Y., Ikeguchi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 220 KB

2004

743

3SA04 Integration of information on biomolecules

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 215 KB

2004

744

3P043 Protective effect of sodium dodecyl sulfate on the thermal denaturation of serum albumin

Moriyama, Y., Kawasaka, Y., Kobayashi, C., Takeda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

745

3P059 Amyloid aggregate formation process of apomyoglobin and effect of ganglioside

Koizumi, M., Hirai, M., Inoue, K., Miura, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

746

3P062 Structural determination of insulin aggregate and amyloid fibril studied by high pressure FT-IR spectroscopy

Takeda, N., Maeda, R., Ado, K., Horibe, T., Kikuchi, M., Taniguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

747

3SB04 Direct observation of photolysis-induced structural changes in hemoglobin

Adachi, S., Shiro, Y., Park, S.-Y., Tame, Jeremy R. H., Shibayama, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

748

3P082 The acceleration effect of Ruggedness for the conformation transition kinetics of bio-macromolecular

Shimono, M., Komatsuzaki, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

749

3P089 Enthalpic barrier at the transition state of a protein, SH3 domain, with a charge-neutralized allatom protein model

Mitomo, D., Maruyama, K., Higo, J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

750

3P105 Construction of peptide-block deletion/insertion libraries for the study on structure-function relationship

Yoshida, C., Kitamura, K., Nishigaki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 223 KB

2004

751

3P112 Construction of the protein-based Supramolecular unit by connecting tube-like protein with cubic protein

Sugimoto, K., Kanamaru, S., Arisaka, F., Yamasita, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

752

3P115 The correlation of the novel protein secondary structure assignment and CD spectrum of protein

Osoegawa, H., Konko, K., Ohuchi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

753

3P121 Cavities in protein structure : Preservation of cavity locations in a protein from different biological species

Nakai, S., Matsumura, N., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

754

3P122 Novel functions of a sulfur atom in proteins : Phylogenetic analysis on the conservation of S…O interactions

Iwaoka, M., Isozumi, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

755

3P130 Molecular dynamics simulation of actomyosin system using coarse-grained model II

Terada, T.P., Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

756

3SC02 Growth Factor in Solid Phase : Growth Promotion of NIH3T3 Cells by FGF2-immobilized Polyhedron

Mori, H., Furuyama, A., Shukunami, C., Hiraki, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 255 KB

2004

757

3SC05 Design of Intelligent Nano-Biointerface and It's Biomedical Applications

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

758

3P209 Regulations for the number of the polar flagella by FlhF and FlhG in Vibrio alginolyticus

Kusumoto, A., Kamisaka, K., Terashima, H., Shinohara, A., Yakushi, T., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

759

3P226 Tetanus induced Ca^ increase and activation of mitochondria in presynaptic terminals

Suzuki, N., Hirata, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

760

3P292 Evolutionary analyses of archaeal type retinal proteins from a genus Haloarcula

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

761

3P309 Simultaneous measurement of growth and movement of swimming cells using onchip single-cell cultivation system

Hattori, A., Umehara, S., Wakamoto, Y., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

762

10.2142/biophys.44.s267_2

Fujimura, Y., Yoshioka, S., Kinoshita, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

763

3P311 The analysis of cellular functions by multipoint Fluorescence Correlation Spectroscopy(FCS)

Takahashi, Y., Sawada, R., Ishibashi, K., Mikuni, S., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

764

3P317 Development of high sensitive and multifrequency ESR apparatus and its application to DNA studies

Hobo, F., Yashiro, H., Hagiwara, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 150 KB

2004

765

10.2142/biophys.44.s279

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 104 KB

2004

766

3SB56 Structural rearrangement of integrins in transmembrane signaling

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

767

3SC54 Intermediate structure and hydroxylation mechanism of xanthine oxidoreductase

Okamoto, K., Matsumoto, K., Yamaguchi, Y., Matsumura, T., Hille, Russ, Eger, Bryan, Pai, Emil F., Nishino, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

768

1SA02 SecA-SecYEG protein translocation machinery : toward molecular understanding of its dynamic actions

Mori, H., Nakatogawa, H., Vassylyev, Dmitry, Ito, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

769

1P004 Separation of amyloid fibrillation site from active site in calcitoni

Naito, A., Kamihira, M., Fujita, H., Endo, H., Itoh, Y., Nishimura, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

770

1P005 Analysis of Interaction between Extracellular Loop II of the Kappa Opioid Receptorn and Dynorphin by Solid-State NMR.

Miyamori, T., Nishimura, K., kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 248 KB

2004

771

1P017 Conformational change of mouse anti-NP antibody constant domains induced by antigen binding

Sagawa, T., Oda, M., Morii, H., Kozono, H., Azuma, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

772

1P023 Crystal structure of KP-43 protease and alteration of substrate specificity of subtilisin

Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

773

1P040 The conformation and the characteristic fluorescence decay of active site in ribosome-inactivating proteins

Fukunaga, Y., Nishimoto, E., Yamashita, K., Watanabe, K., Yamashita, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

774

1P045 Development of a method for detecting similarities among protein surface regions using physicochemical properties of atomic environments

Minai, R., Matsuo, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

775

1P046 Quantum chemical study on in silico prediction of protein functions

Fukushima, K., Wada, M., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

776

1P059 Typical structure of carbohydrate binding site

Shionyu-Mitsuyama, C., Shirai, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

777

1P061 Dissociation processes of amyloid-like fibrils studied by high pressure fluorescence technique

Latif, Abdul Raziq Abdul, Tachibana, H., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

778

1P069 Transient-phase kinetic and thermodynamic studies on the cofactor binding to 3alpha-hydroxysteroid dehydrogenase

Kataoka, S., Ueda, S., Imamura, S., Ohnishi, M., Ishijima, S., Sagami, I., Oda, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

779

1P072 Analysis of the bacteria deactivation mechanism of cluster ions generated by plasma discharge

Nishikawa, K., Yagi, H., Bamba, A., Digel, I., Demirci, T., Artmann, G.M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

780

1P082 Periodic fast multipole methods : stress tensor and quasi-two-dimensional system

Amisaki, T., Fujiwara, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

781

1P117 Solution NMR Study of Halobacterial Transducer pHtrII Linker Region

Fukuzaki, Y., Okuda, H., Sudo, Y., Yamabi, M., Mishima, M., Kamo, N., Kojima, C.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

782

1SC01 Experiments and mathematical modeling for the phase dynamics of oscillation of the plasmodium of true slime mold

Kobayashi, R., Tero, A., Nakagaki, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

783

1P132 NeuroD2 induces the differentiation of embryonic stem cells into neurons

Sugimoto, Y., Furuno, T., Nakanishi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

784

1P141 Actin-activated Mg-ATPase activity under the catch state of bivalve adductor muscle

Yamada, A., Yoshio, M., Oiwa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

785

1P155 The distances between Troponin T and Tropomyosin in the thin filament observed by FRET

Kimura, C., Miki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 226 KB

2004

786

1P174 Flexibility of head-tail junction of heavy meromyosin observed by high-pressure small-angle X-ray scattering

Kuwamoto, S., Fujisawa, T., Maeda, Y., Okamoto, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

787

1P200 Structural analysis of cell membrane complex (CMC) in cuticle using a micro X-ray beam

Ohta, N., Oka, T., Inoue, K., Yagi, N., Kato, S., Hatta, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

788

1SD01 Crystal structure of human mini TrpRS

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

789

1P224 Effect of cholesterol on the ripple phase in sphingomyelin bilayers

Kinoshita, M., Kato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

790

1P240 A novel constitutively active mutation on the cytoplasmic surface of metabotropic glutamate receptor

Yamashita, T, Terakita, A., Kai, T., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

791

10.2142/biophys.44._s6_

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 77 KB

2004

792

1P301 Membrane current fluctuations in the modified Oosawa model with Ca-gated K-channels

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 230 KB

2004

793

1P304 A novel circadian clock system conceivable in C. elegans

Hasegawa, K., Saigusa, T., Tanaka, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 229 KB

2004

794

1P305 Energy metabolism and biological time in the nematode C.elegans

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 229 KB

2004

795

1P311 Information Processing on a Reaction-Diffusion System : Distance Detector

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

796

1P314 Analysis of protoplasmic pattern that suggests rapid coherence recovery in Physarum polycephalum

Tsuda, S., Gunji, Y.P.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 276 KB

2004

797

2P021 Conformational stability of hen lysozyme at low temperature and high pressure

Maeno, A., Takeuchi, R., Fujisawa, M., Kamatari, Y.O., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 230 KB

2004

798

2P028 Structural characteristics of amyloid protofibril of disulfide-deficient lysozyme revealed by the atomic force microscopy

Kono, R., Takeuchi, R., Fujisawa, M., Tachibana, H., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

799

2P033 Prediction of Folding Mechanism of Plant Hemoglobins by Contact Maps Derived from the Statistics of Interresidue Average Distances

Nakajima, S., Alvrarez-Salgado, Emma, Arredondo-Peter, Raul, Kikuchi, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

800

2P037 Toward an efficient structure prediction scheme: Combining a structure-sequence alignment method with the Langevin dynamics calculation

CETIN, HIKMET, Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 233 KB

2004

801

2P043 Refinement of Comparative-Modeled Protein Structure by Multicanonical Molecular Dynamics

Ishitani, R., Terada, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 263 KB

2004

802

2P047 The effects of amino-acid replacement on protein dynamics : Normal mode analyses on human lysozyme mutants

Endo, S., Tada, M., Wako, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

803

1SD51 Structure of RC-LH1 core-complex from purple photosynthetic bacteria

Hashimoto, H., Cogdell, Richard J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

804

1SD52 Functional implications of photosystem II from its crystal structural analysis

Shen, J.-R., Kamiya, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

805

2P082 The role of heme proximate amino acids in the substrate binding to IDO

Uno, T., Matuura, A., Hosokawa, T., Tsumoto, R., Tomisigi, Y., Ishikawa, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

806

2P115 deltaG-based prediction and experimental confirmation of SYCRP1-binding sites on Synechocystis genome

Omagari, K., Yoshimura, H., Suzuki, T., Takano, M., Ohmori, M., Sarai, A., Suyama, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

807

2P156 F-actin binding proteins, lasp-1, lasp-2, and fascin show different localisation in the neuronal growth cone

Nakagawa, H., Taguchi, S., Terasaki, A.G., Ohashi, K., Miyamoto, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

808

2P158 Motile responses of dorsal root ganglion growth cones upon application of nerve growth factor

Tani, T., Harada, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

809

2P159 Lateral diffusion pattern and cluster formation of NGF bound receptors in PC12D cells

Shibata, S.C., Yanagida, T., Sako, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

810

2P183 Asymmetric nucleocytoplasmic transport using a novel in vitro assay system

okonogi, A., Hiroshima, M., Shiina, S., Kose, S., Imamoto, N., Tokunaga, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

811

2P195 Restriction of structural changes of an actin filament diminishes ADF/cofilin activity to sever the filament

Hayakawa, K., Tatsumi, H., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

812

2P197 Visualization of the formation of stress fibers : role of actomyosin contraction

Senju, Y., Hirata, H., Miyata, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

813

2SB05 Amplification of receptor signalling by calcium entry mediated translocation and activation of PLC gamma2 in B lymphocytes

Mori, Y., Nishida, M., Numaga, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

814

2P203 Tensional Home-ostasis of a Single Cell Regulated by Phosphorylation of the Myosin Regulatory Light Chain

Mizutani, T., Haga, H., Takahashi, M., Kawabata, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

815

2P209 A cell culture condition which prevents anoikis of MDCK cells

Emoto, Y., Imafuku, C., Tawada, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 216 KB

2004

816

2P216 Behavior of silk fibroin on phospholipid membranes

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 274 KB

2004

817

2P223 Access of non-electrolytes to the central cavity increase the open probability of KcsA potassium channel

Shimizu, H., Inoue, F., Konno, T., Oiki, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

818

2P254 Pigment replacement of Photo-systemII reaction center by Chlorophylld

Hirano, E., Tomo, T., Nakazato, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

819

2P263 Analysis of the recovery process from M intermediate to dark state in the photocycle of analogue PYP by transient absorption spectroscopy

Soda, K., Hamada, N., Ichida, H., Nakamura, R., Matsumoto, K., Kanematsu, Y., Tokunaga, F.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

820

2SD01 PDB alert system for finding the latest New Fold

Koike, R., Kinoshita, K., Yura, K., Ota, M.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 174 KB

english, 2004

821

2P288 Method for understanding AFM movies of protein in light of the atomic structural model

Matada, K., Kodera, N., Miyagi, A., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

822

2P308 Fabrication of semiconductor nanoparticles in the apoferritin protein

Iwahori, K., Yoshizawa, K., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

823

2P310 Two-dimensional crystallization of Dps

Sonoda, K., Okuda, M., Suzuki, K., Yoshizawa, K., Yamashita, I., Yoshimura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

824

3P009 Statistical Analysis of Helix-Coil Transition of Polypeptides Induced by Denaturants

Shinjo, M., Li, Jinsong, Shimizu, A., Kano, F., Matsumura, Y., Teramoto, A., Kihara, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

825

3P014 Mechanism for protein stabilization in Pseudomonas aeruginosa cytochrome c551 and its variants

Sonoyama, T., Uchiyama, S., Nakamura, S., Oshima, A., Kobayashi, Y., Sambongi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

826

3P036 Structural analysis of equine beta lactoglobulin in the non-native states using the site-directed proline substitutons

Nakagawa, K., Tokushima, A., Yamada, Y., Ikeguchi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

827

3P056 Anionic contribution for fibrous aggregation of tau repeat domain

Konno, T., Oiki, S., Hasegawa, K., Naiki, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 213 KB

2004

828

3P057 Calorimetric analysis of amyloid fibril formation of beta-2-microglobulin

Yamamoto, K., Kardos, Jozsef, Hasegawa, K., Naiki, H., Goto, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

829

3P061 Aggregation of Partially Denatured Myosin Subfragment-1 into the Spherical Oligomer with Amyloid-Like Dye Binding Properties

Komatsu, H., Kimori, Y., Nakagawa, H., Kodama, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

830

3P064 Self-assembly of a peptide into nanofiber and its utilization as a new bio-material

Kiyozono, M., Tanaka, S., Mukai, Y., Kawabata, M., Tamura, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

831

3P068 Latest developments in ProTherm : Thermodynamic Database for Proteins and Mutants

Bava, Abdulla, Gromiha, Michael, Uedaira,, Kitajima,, Sarai,

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

832

3P083 Persistence of the modular structure in simulated unfolding processes of protein G

Takahashi, K., Go, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

833

3P084 β-Hairpin Structures of G-peptide in Water Studied by a Molecular Dynamics Simulation

Yoda, T., Sugita, Y., Okamoto, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

834

3P101 Linkage between the N-terminus of a peptide and its encoding mRNA

Ueno, S., Hukaisi, K., Arai, H., Suzuki, M., Husimi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 222 KB

english, 2004

835

3P102 Protein synthesis on bead using in vitro virus : Can immobilized mRNA enhance the translation and folding of protein?

Biyani, Manish, Husimi, Yuzuru, Nemoto, Naoto

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 222 KB

english, 2004

836

3P125 The new inequality among measurable quantities in a flashing ratchet

Hayashi, K., Sasa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

837

3P141 Rotation and hydrolysis activities of F_1-ATPase with γ subunit truncations

Hossain, Mohammad Delawar, Furuike, S., Maki, Y., Adachi, K., Ali, Yusuf, Huq, Mominul, Kinosita, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

838

3P159 Microscopic analysis of interaction of single myosin V molecule with an actin filament

Oguchi, Y., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

839

3P175 Dirnerization of putative coiled-coil stalk region of unc104 kinesin

Shimizu, Y., Morii, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

840

3SC04 3D imaging techniques from atomic to molecular and cellular level

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

841

3P211 The relation between autophosphorylation and dimerization of an oxygen sensor

Tanaka, A., Nakamura, H., Shiro, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

842

3P264 Change of the cell physiological state of Escherichia coli during the formation of symbiotic relationship with Dictyostelium cells

Yamada, A., Matsuyama, S., Todoriki, M., Kashiwagi, A., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

843

3P276 Conformation of helix terminal residues at end region of transmembrane helix

Kitai, Y., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

844

1P010 NMR analysis of the interaction between archaeal prefoldin and chaperonin

Nishi, Y., Kurimoto, E., Yamaguchi, Y., Zako, T., Yoshida, T., Yohda, M., Kato, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

845

1P011 Interaction analysis between hyperthermophilic chaperonin and prefoldin using SPR sensor

Zako, T., Yoshida, T., Kanzaki, T., Murase, Y., Ide, N., Iizuka, R., Funatsu, T., Yohda, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

846

1P013 Structural analysis of hyperthermophilic archaeal chaperonin II mutant fused with substrates

Itami, K., Furutani, M., Maruyama, T., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

847

1P031 Development of a quantitative measurement system for single molecule FRET

Sugawa, M., Arai, Y., Iwane, A.H., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

848

1P049 Prediction of protein-protein interaction residues by using Support Vector Machine

Ishigaki, K., Ishida, T., Terada, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

849

1P074 ATP dependent protein unfolding and translocation by the molecular dynamics simulation

Takeuchi, S., Koga, N., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

850

1P094 Sequence Dependent Interaction between Transcription Factor Protein and DNA Studied by Colloidal Probe Atomic Force Microscopy

Shimizu, Y., Suzuki, T., Fujita, M., Kurihara, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

851

1P108 MD Simulation of Halorhodopsin in Lipid bilayer

Hayashi, M., Miyagawa, Y., Shinoda, W., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

852

1P122 Weak interaction between water and a coagulant of myosin, gluconate

Tamura, Y., Ooi, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

853

1P136 Twitchin of striated adductor muscles regulates interaction between actin and myosin filaments at resting state

Tsutsui, Y., Yoshio, M., Oiwa, K., Yamada, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

854

1P147 Orientations and mobilities of new bifunctional spin labels attached to skeletal troponin C in reconstituted muscle fibers

Nakamura, M., Chatani, S., Ueki, S., Yamamoto, Y., Arata, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

855

1P166 Calculation of potential of mean force between two actin molecules making contact through excluded volume effect

Shimada, Y., Irisa, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

856

1P180 An atomic model of actomyosin rigor complexes from three-dimensional cryo-electron microscopic images

Yasunaga, T., Noda, K., Kano, Y., Wakabayashi, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 263 KB

2004

857

1P191 Shape Changes and Vesicle Fission of Giant Unilamellar Vesicles of Liquid-Ordered Phase Membrane Induced by Lysophosphatidylcholine

Sano, R., Tanaka, T., Yamashita, Y., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

858

1P199 Binary mixtures of ganglioside GM3 and SOPC studied by x-ray diffraction

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

859

1SD04 Structural basis of oxidized LDL recognition by scavenger receotor LOX-1

Ohki, I., Ishigaki, T., Oyama, T., Machida, S., Morikawa, K., Tate, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

860

1P211 Spontaneous formation of supported phospholipid layer assisted by non-ionic surfactant

Sugiura, T., Ishiguro, R., Kameyama, K., Hiramatsu, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

861

1P227 Interactions of Local Anesthetics with Model Biomembrane(3) : Partition into unsaturated phospholipid bilyer membranes

Nishimoto, M., Nagayama, K., Hata, T., Satake, H., Matsuki, H., Kaneshina, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

862

1P228 Interactions of Local Anesthetics with Model Biomembrane(1) : Correlation with anesthetic potency

Yamasaki, N., Hata, T., Satake, H., Matsuki, H., Kaneshina, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

863

1P238 MD Simulation Study on the Solution Structure and Dynamics of the Ground and Intermediate States of Rhodopsin

Miyagawa, Y., Shinoda, W., Okada, T., Higo, J., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

864

1P253 Characteristics of light-independent structural intermediate of halorhodopsin at the ground state

Kubo, M., Sato, M., Kamo, N., Aizawa, T., Demura, M., Nitta, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

865

1P254 Mechanism of chloride-ion pump in pharaonis halorhodopsin studied by FTIR spectroscopy

Shibata, M., Muneda, N., Sasaki, T., Shimono, K., Demura, M., Kamo, N., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

866

1P257 Effects of mutation and transducer binding on the pKa of proton releasing group during the photocycle of ppR

Iwamoto, M., Hasegawa, C., Sudo, Y., Shimono, K., Araiso, T., Kamo, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

867

1P270 Role of Gln1029 and Asn1008 in the Photoactivation Processes of Phy3-LOV2 : Analysis of Q1029L and N1008V using FTIR spectroscopy

Nozaki, D., Iwata, T., Ishikawa, T., Todo, T., Tokutomi, S., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

868

1P272 Photo-induced structure change around LOV2 domain of Phototropin

Eitoku, T., Nakasone, Y., Matsuoka, D., Tokutomi, S., Terazima, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

869

1P277 Light-induced structural changes of AppA for a signaling state

Masuda, S., Hasegawa, K., Ono, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

870

10.2142/biophys.44._s29_

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 5 KB

2004

871

10.2142/biophys.44.app16

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 293 KB

2004

872

1P292 Radiation effects on endocytosis in human breast cancer cell lines

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

873

1P302 Modelling of the regulation of pyruvate dehydrogenase complex

Saito, R., Sarai, N., Matsuoka, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 229 KB

2004

874

1P307 Phase dynamics of the alpha wave under periodic flicker stimuli

Nishifuji, S., Ohkado, H., Tanaka, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

875

1P315 Dynamical formation of protein interaction networks : based on slow relaxations and multi-states in proteins

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 276 KB

2004

876

2P010 Novel crystal structure of L-proline dehydrogenase from P. horikoshii

Tsuge, H., Kawakami, R., Sakuraba, H., Ago, H., Miyano, M., Aki, K., Katunuma, N., Ohshima, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 229 KB

2004

877

2P053 Fast Protein-Protein Docking Prediction Using Series Expansion in terms of Basis Functions Based on Spherical Harmonics

Sumikoshi, K., Terada, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

878

2P071 Study of structure-function relationship of hemoglobin by computer simulation

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 228 KB

2004

879

2P087 Analysis of the interaction between cytochrome c_3 and its physiological partner [NiFe] hydrogenase

Yahata, N., Takayama, Y., Saitoh, T., Ozawa, K., Nakahara, A., Ogata, H., Higuchi, Y., Akutsu, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

880

2P095 Resonance Raman Study on the P intermediate of Paracoccus denitrificans Cytchrome c Oxidase

Ikemura, K., Ogura, T., Mukai, M., Shimada, H., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

881

2P106 Interdependence of Roll and Twist in DNA deformation

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 248 KB

2004

882

2P110 Analysis of sequence-dependent structural properties of DNA by molecular dynamics simulation

Fujii, S., Takenaka, S., kono, H., Go, N., Sarai, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

883

2P149 Effects of myosin-ATPase inhibitor on self-oscillatory properties of embryonic cardiac muscle cells

Aoyama, S., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

884

2P178 Association-dissociation kinetics of beta-actin mRNA binding to ZBP1

Egawa, T., Kurama, H., Sasuga, Y., Harada, Y., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 225 KB

2004

885

2P181 Biological applications of blind spectral decomposition method based on multivariate analysis

Shirakawa, H., Miyazaki, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

886

2P250 Flash-induced FTIR spectrum of the secondary quinone electron acceptor Q_B in photosystem II

Suzuki, H., Nagasaka, M., Sugiura, M., Noguchi, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

887

2P268 A study of oligomeric state of Halorhodospira halophila NifA

Tsuihiji, H., Yamazaki, Y., Kamikubo, H., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

888

2P291 Dynamic behavior of motor proteins captured by high-speed AFM

Miyagi, A., Maeda, D., Kodera, N., Oiwa, K., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

889

2P304 Encaging a coiled DNA by light

Ichikawa, Masatoshi

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

890

2P305 Development of Laser Ablation Method for the Acquisition of Target DNA Fragment

Kurosawa, O., Washizu, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

891

2SD06 Computational design of water-soluble analogues of the potassium channel KcsA

Kono, H., Solvic, A.M., Lear, J.D, Saven, J.G., DeGrado, W.F.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 198 KB

english, 2004

892

3P010 Structural characterization of the peptide fragments corresponding to the folding elements of Escherichia coli dihydrofolate reductase

Arai, M., Iwakura, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

893

3P029 Highly flexible structure of hyper-active mutant of DHFR as revealed by compressibility

Gekko, K., Kamiyama, T., Katayanagi, K., Iwakura, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

894

3P039 Folding core fomation of bovine and equine beta lactoglobulin

Matsumura, Y., Li, Jinsong S., Kihara, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 220 KB

2004

895

3P044 Solution neutron scattering measurements of a protein polysaccharide complex mucin

Watanabe, Y., Shiraishi, M., Otomo, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

896

On the correlation between hydrogen bond field by MD simulation and crystal water sites by cryogenic X-ray crystal structure analyses

Yokomizo, T., Nakasako, M., Higo, J.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 257 KB

2004

897

3P085 Verifing the Generalized Born energy by replica exchange MD method

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

898

3P092 Long-time Simulation of Protein Folding using Brownian Dynamics Parallelized on Symmetric Multi Processing Computer

Ando, T., Yamato, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

899

3P095 Analysis of large scale protein conformational change using Multiple Go Model

Okazaki, K., Koga, N., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 215 KB

2004

900

3P106 A novel method for producing of monoclonal antibody using yeast display system

Nakagawa, M., Okatani, R., Azuma, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 223 KB

2004

901

3P109 Design of stable β-sheet peptides based on a single layer β-sheet

Okamoto, H., Sasakawa, H., Nakagawa, T., Tamura, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

902

3SB06 High resolution structure of cytochrome c oxidase

Muramoto, K., Aoyama, H., Yamashita, E., Shinzawa-Itoh, K., Tsukihara, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

903

3P132 Molecular dynamics simulations of an evolution of collective motions in the motor domain due to a disturbance given to the ATPase pocket

Kawakubo, T., Okada, O., Minami, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

904

3P135 Theoretical model for rotary molecular motors as chemical engines

Sasaki, K., Ito, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

905

3P151 The method of force measurment, after checking single molecules

Nishikawa, S., Nishikawa, M., Zulliger, Martin, Iwane, A.H., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

906

3P210 Purification of Na^+-driven flagellar motor of V.alginolyticus

Terashima, H., Yakushi, T., Kanbe, M., Aizawa, S-I., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

907

3P221 The endocrine disrupter Bisphenol-A acutely induces morphologica changes in rat hippocampal CA1 pyramidal neurons

Tanabe, N, Komatsuzaki, Y, Tsurugizawa, T, Mitsuhashi, K, Ooishi, Y, Murakami, G, Ishii, H, Kimoto, T, Mukai, H, Kawato, S

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

908

3P227 Analysis of tetanus-induced Ca^-independent short term enhancement of EPP at th frog neuromuscular junction

Hirata, N., Toyota, M., Suzuki, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

909

3P238 Acute effect of corticosterone on N-methyl-D-aspartate reseptor-mediated Ca^ elevation in mouse hippocampal slices

Osanai, H., Sato, S., Arakawa, Y., Monma, T., Hirano, A., Saito, M., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

910

3P242 Dynamics of hidden figure perception and its implications for basic activity of the brain

Murata, T., Hamada, T., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

911

3P271 Influence of profile construction methods on protein fold recognition and alignment accuracy

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

912

3P285 Search for DNA repair related genes in Deinococcus radiodurans genome

Yura, K., Kono, H., Go, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

913

3P294 Phylogenetic position of Nymphaeaceae, elucidated by principal coordinate analysis

Uriu, K., Sunaga, R., Goda, M., Ohnishi, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 267 KB

2004

914

10.2142/biophys.44.s278

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 145 KB

2004

915

3SB55 Structures and functions of translocators that mediate protein translocation across the membrane

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

916

3SC53 Molecular mechanism of NO reduction by nitric oxide reductases

Shiro, Y., Kumita, H., Hino, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

917

1P007 NMR analysis of (6-4)photolyase using stable isotope labeling techniques

Kato, A., Ueda, T., Todo, T., Terasawa, H., Shimada, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 248 KB

2004

918

1P021 Double-sided ubiquitin binding of Hrs-UIM

Hirano, S., Kawasaki, M., Ura, H., Kato, R., Stenmark, Harald, Wakatsuki, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

919

1P026 Unique tetramer structure of circadian clock protein KaiB reveals its functional site

Iwase, R., Imada, K., Hayashi, F., Uzumaki, T., Furukawa, Y., Namba, K., Ishiura, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

920

1P033 Fluorescence cross correlation spectroscopic analysis for filament formation of nonmuscle myosinII isoforms

Mitsuhashi, M., Sakata, H., Kinjo, M., Takahashi, M., Yazawa, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 270 KB

2004

921

1P065 Functional analysis of C-terminal deficient mutants of chaperonin GroEL

Miura, T., Zako, T., Ueno, T., Funatu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

922

1SB04 Single-molecule imaging of molecular motors and AAA-proteins by advanced TIRF microscopy

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

923

1P083 Theoretical aspect of Cross-saturation method

Matsumoto, M., Shimada, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

924

1P086 Vacuum-Ultraviolet Circular Dichroism Spectroscopy of Heat and Cold-Denatured Proteins

Matsuo, K., Sakurada, Y., Yonehara, R., Kataoka, M., Gekko, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

925

1P092 Development of a general method for measuring force of interaction between biomolecules by AFM

Sekiguchi, H., Arakawa, H., Ikai, A., Ohtani, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 333 KB

2004

926

1P127 Determination of atomic solvation parameters for implicit solvation method

Shirao, H., Ohishi, K., Masuya, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

927

1P146 Fluorescence imaging of conformational changes in actin filaments

Shimozawa, T., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

928

1P149 ESR analysis of troponin I regulatory region in reconstituted thin filaments

Aihara, T., Ueda, K., Nakamura, M., Ueki, S., Kimura, C., Miki, M., Arata, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 220 KB

2004

929

1P153 KINETICS OF STRUCTURAL TRANSITION OF RECONSTITUTED MUSCLE THIN FILAMENTS WHIT D234 TROPOMYOSIN STUDIED BY FLUORESCENCE ENERGY TRANSFER

Shitaka, Y., Kimura, C., Miki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 226 KB

2004

930

1P210 Membrane Fusion and Disruption Mechanisms of Bombolitin2-DPPC Dispersion Systems by Solid-state NMR Studies

Toraya, S., Nishimura, K., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

931

1P239 Comparative analyses of active state of varied rhodopsins by site-directed mutagenesis

Terakita, A., Tsukamoto, H., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

932

1SA52 Angstrom X-ray lasers exploiting synchrotron science of next generation

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

933

1P249 FTIR study of internal water molecules in the M intermediates of bacteriorhodopsin mutants

Mizuide, N., Shibata, M., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 243 KB

2004

934

1P263 Photochemical reaction of pharaonis phoborhodopsin with W171 mutation at low temperature

Iwasa, T., Abe, E, Yoshida, H., Shimono, K., Kamo, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

935

1P273 Photoreaction of FKF1-LOV domain at low temperature : studied by FTIR and UV-vis absorption

Zikihara, K., Iwata, T., Matsuoka, D., Todo, T., Kandori, H., Tokutomi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

936

1SB53 Role of solvent clusters in protein folding

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

937

10.2142/biophys.44.cover14

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 141 KB

2004

938

1P281 Role of the β5-β6 loop in PYP photocycle

Sasayama, H., Harigai, M., Kamikubo, H., Yamazaki, Y., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

939

1SB55 Role of water molecules in chemical reactions of biological systems

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

940

2P097 Direct observation of the RuvA-RuvB mediated branch migration of Holliday junction DNA with single-molecule analysis

Han, Y.-W., Tani, T., Hayashi, M., Hishida, T., Iwasaki, H., Shinagawa, H., Harada, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

941

2P112 Two dimentional structure of GFPmRNA analyzed by binding of fluorescent antisense oligoDNA

Yanagihara, N., Tadakuma, H., Ishihama, Y., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

942

2P116 Interaction Free Energy Landscapes Between Amino Acid Side Chain and Nucleic-Acid Base Pair : Arg, Lys and His

Yoshida, T., Aida, M., Sarai, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

943

2P138 Structural analysis of motility organelle responsible for gliding motility of Saprospira grandis

Ishikawa, N., Aizawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

944

2P182 Analysis of transcription factor binding process in nuclear compartment by fluorescence correlation spectroscopy

Mikuni, S., Tamura, M., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

945

2P232 B.subtilis multidrug transpoter EbrAB : Single polypeptide, EbrB, functions with C-terminus truncation

Kikukawa, T., Nara, T., Miyauchi, S., Kamo, N., Araiso, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

946

2P244 Observation of LH2 and RC-LH1 in chromatophore from purple photosynthetic bacteria by using cryo-AFM

Iida, K., Yamamoto, D., Furukawa, M., Ito, S., Nango, M., Kouyama, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 266 KB

2004

947

3P070 De novo protein structure prediction : Successes and failures in CASP6

Fujitsuka, Y., Chikenji, G., Park, S.J., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 227 KB

2004

948

3P073 The role of water in the state transition of peptide : Application of Transition Path Sampling

Koyama, Y., Endo, M., Takano, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

949

3SB01 Crystallographic Research on Reaction Mechanism in a Protein Molecule

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

950

3P113 Two dimensional crystallization of bacterioferritin

Noguchi, M., Takasaki, U., Takeda, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

951

3P126 Model describing cooperative movement of molecular motors under fluctuating potential

Esaki, S., Ishii, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

952

3P148 Single molecule analysis of the rotation in F_1-ATPase mutant: the effect of ATP-binding dwell length on the catatytic dwell

Shimabukuro, K., Muneyuki, E., Yoshida, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

953

3P231 Synaptic mechanism of facilitated glutamate release by the neurosteroid PREGS in hippocampus

Sokabe, M., Chen, L.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

954

3P236 Analysis of brain neurosteroid synthesis in rat hippocampal neurons

Hojo, Y., Nakajima, K., Enami, T., Kimoto, T., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

955

3P261 Synthesis of metabolites appearing in a TCA cycle in hydrothermal environments

Ikeya, R., Nemoto, A., Imai, E., Honda, H., Hatori, K., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

956

3SC55 Structure and function of the heme-based gas sensor proteins

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 201 KB

2004

957

1P022 Crystal structure and reaction mechanism of UDP-N-acetylglucosamine pyrophosphorylase from Candida albicans

Maruyama, D., Nishitani, Y., Nonaka, T., Kita, A., Fukami, T.A., Sogabe, S., Mio, T., Yamada-Okabe, H., Yamada-Okabe, T., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

958

1SC07 Summary

Yoshikawa, K., Ohta, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 188 KB

2004

959

1P168 Three-dimensional network formation by self-organization of actin on gel surface

Ura, T., Kakugo, A., Gong, Jian Ping, Osada, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

960

1P188 Theory for the response of sudden length change in muscles

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

961

1P225 Formation of lipid bilayer membranes supported on polymer films with micropores and reconstitution of proteins to the supported membranes

Sato, T., Kakutani, T., Tsujii, Y., Fukuda, T., Asami, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

962

1P275 Photocycle of BLUF protein Slr1694 of cyanobacterium Synechocystis sp. PCC 6803

Ono, T., Hasegawa, K., Masuda, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

963

2P213 Theoretical analysis of opening-up liposomes

Umeda, T., Suezaki, Y., Takiguchi, K., Hotani, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 274 KB

2004

964

3P006 Pressure effects on the α-helix of de novo designed peptide and protein

Takeda, N., Takekiyo, T., Okuno, A., Shimizu, A., Isogai, Y., Kato, M., Taniguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

965

10.2142/biophys.44.s277_2

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 283 KB

2004

966

1P131 Serotonin enhances NGF-induced neurite outgrowth via 5-HT_3 receptors in PC12 cells

Homma, K., Kitamura, Y., Ogawa, H., Oka, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

967

2P192 Cell cycle-dependent dynamics of the endoplasmic reticulum (ER) in mammalian cells (I): Mechanism of disruption of the ER network

Tanaka, A.R., Kano, P., Kondo, H., Yamauchi, S., Hosokawa, N., Nagata, K., Murata, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 277 KB

2004

968

3P007 Hydration states of collagen triple helical structures

Nishi, Y., Uchiyama, S., Doi, M., Nishiuchi, Y., Nakazawa, T., Ohkubo, T., Kobayashi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

969

3P023 Significance of oligomerization and rapid collapse in hemeoxygenase folding

Uzawa, T., Kimura, T., Takahashi, S., Ishimori, K., Akiyama, S., Fujisawa, T., Matsui, T., Saito, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 239 KB

2004

970

3P074 Analysis of Contributions of Hydrophobic Cluster Residues to Protein Folding

Matsumoto, H., Rozi, Ismail E., Tsugika, K., Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

971

3P114 Solution structure of designed lambda-Cro

Isogai, Y., Ito, Y., Ikeya, T., Ota, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

972

3P232 Estrogen acutely changes spine morphology on hippocampal CA1 pyramidal neurons

Tsurugizawa, T., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

973

3P303 Visualization for carbon nanotube in aqueous solution

Shimizu, A., Sowa, Y., Nagai, M., Saito, Y., Arai, F., Ishijima, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 262 KB

2004

974

10.2142/biophys.44.s280_1

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 151 KB

2004

975

1P020 The role of the VHS domain in the dimer formation of GGA proteins

Murasaki, Y., Kamikubo, H., Kawasaki, M., Kato, R., Nakayama, K., Wakatsuki, S., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

976

1P101 Stability of purified bovine NADH-ubiquinone oxidoreductase(complexI)

Nakatsubo, R., Sugiyama, H., Terada, H., Sugimura, T., Nakashima, Y., Shinzawa-Itoh, K., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

977

1P130 Polarization Characteristics of Water Molecules in Cluster

Ohta, S., Matsumoto, H., Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

978

1P268 Why don't some phototropin molecules photoreact at low temperatures?

Sato, Y., Iwata, T., Nozaki, D., Tokutomi, S., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

979

1P154 Direct contact of Tn and actin inhibits their binds to HMM

Mizuno, H., Hatori, K., Honda, H., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 226 KB

2004

980

1SC56 Mechanism of visual consciousness in the human brain

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

981

2P136 Implication of a cytoplasmic role of FliK in hook length control

Hirano, T., Shibata, S., Tani, T., Aizawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

982

2P145 Analyses of coupling between 45 chemoreceptor-like proteins and 3 CheA-like kinases of Vibrio cholerae

Hyakutake, A., Itoh, Y., Nishioka, N., Shiomi, D, Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

983

2P221 Analysis of degranulation mechanism in mast cells with latrotoxin

Hirashima, N., Nakanishi, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

984

2P230 Contribution of Na/Ca exchange current to the action potential waveform in mouse ventricular myocytes

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

985

2P312 Two-dimensional array of feri-oxide nano-particles using protein function

Kobayashi, Y., Okuda, M., Kondo, T., Yoshimura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

986

3SD02 Crystal structure of the tripartite RND transporter

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

987

1P161 Time resolved X-ray diffraction studies of the structural changes of actosmooth S1 complex induced by the photolysis of caged ADP

Wakayama, J., Tamura, T., Inoue, K., Yagi, N., Iwamoto, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 270 KB

2004

988

10.2142/biophys.44._s11_

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 58 KB

2004

989

10.2142/biophys.44._s13__1

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 47 KB

2004

990

10.2142/biophys.44.cover13

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 136 KB

2004

991

1P286 Theoretical study of photocycle of PYP : Analyses of structure and dynamics

Kamiya, M., Saito, S., Ohmine, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 216 KB

2004

992

1P287 Analysis of time-resolved fluorescence spectrum of Photoactive Yellow Protein

Koike, K., Kawaguchi, K., Kimura, A., Yamato, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 216 KB

2004

993

1P306 Interaction of two cell cycle control systems in Chlamydomonas

Matsumura, K., Yagi, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

994

2P008 Structural Chemistry of the various states of the Ni atom of oxidized [NiFe] hydrogenase

Nakahara, A., Ogata, H., Komori, H., Shibata, N., Kikuchi, A., Kato, T., Yamauchi, O., Hirota, S., Higuchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

995

2P058 Crystallization and X-ray diffraction analysis of GatDE

Oshikane, H., Fukai, S., Nakama, T., Feng, Liane, Soiwl, Dieter, Nureki, O.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

996

2P102 Structuer and function of feast/famine regulatory proteins : 1. 3D-Reconstruction of various assembly forms by cryo-electron microscopy

Ishijima, S.A., Koike, H., Clowney, L., Tokuyoshi, M., Suzuki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 252 KB

2004

997

2P117 Thermodynamics of protein-DNA complex formation in relation to structure

Uedaira, H., Kono, H., Prabakaran, Ponraj, Kitajima, K., Sarai, A.

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 222 KB

english, 2004

998

2SA02 Regulation of the cooperative binding of the heat-stable MAPs on microtubules

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 254 KB

2004

999

2P151 Characteristic responses of filamin A-crosslinked F-actin networks to mechanical and osmotic stresses

Ito, T., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

1000

2P157 Direct observation of actin meshwork in the groth cone with apodized phaze contrast microscopy

Katoh, K., Otaki, T., Suzuki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 258 KB

2004

1001

2SA04 Functions of Pin1, a regulatory molecule of phophorylated proteins, in cancer and Alzheimer's disease

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 228 KB

2004

1002

2P163 Single-molecule imaging of trimeric G-protein in Dictyostelium cells during chemotaxis

Miyanaga, Y., Ueda, M., Devreotes, Peter N., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

1003

2P172 EGF-binding dynamics to living cells studied by single-molecule observation technique

Teramura, Y., Ichinose, J., Yanagida, T., Sako, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

1004

2P194 Heat Shock Protein(HSP) induced adaptation to mechanical stress

Oguro, A., Sakurai, T., Otawa, M., Okuno, M., Nagata, K., Atomi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

1005

2P198 Dynamic behavior of actin fibers and cytomembrane in reorganizing process of actin cytoskeletal structure

Sato, K., Nishijima, S., Adachi, T., Tomita, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

1006

2P214 Photo-induced reversible morphological transition in a cell-sized liposome

Hamada, T., Sato, Y., Nagasaki, T., Yoshikawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 274 KB

2004

1007

2P233 Permeation of water in mitochondorial membrane

Sonoda, T., Kasai, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

1008

2P269 Electron spin resonance imaging to estimate intracerebral reducing ability of neonatal isolated rats after acute stress

Yokoyama, H., Morinobu, S., Oteki, T., Ueda, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 275 KB

2004

1009

2SD03 Multiple associations of DNA strands with non-complementary sequences and their biological implications

Journal:

Seibutsu Butsuri

Year:

2004

Language:

english

File:

PDF, 174 KB

english, 2004

1010

3P031 Effects of concentrated GuHCl on residue-specific HD-exchange rates of proteins in non-native state-0SS and 2SS-variants of lysozyme

Kimura, M., Yamasaki, K., Iimura, S., Noda, Y., Tatibana, H., Segawa, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

1011

3P045 EspB from enterohaem-orrhagic Escherichia coli O157 is a natively partially folded protein

Hamada, D., Ikegami, T., Yanagihara, I.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 265 KB

2004

1012

3P123 Reconsideration of the relatoinship between modules and Introns

Nosaka, M., Kumamoto, T., NGAHU, Antony

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

1013

3P127 Nonequilibrium Energetics for Molecular Motors : A Phenomenological-Energetics Approach

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

1014

3P129

Abe, A., Takano, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

1015

3P145 Rotation and torque of F_1-ATPase at extremely low ATP concentrations

Sakaki, N., Shimo-Kon, R., Itoh, H., Adachi, K., Muneyuki, E., Yoshida, M., Kinosita Jr., K., Furuike, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

1016

3P157 Motility of pseudo-HMM constructed from single-headed brain myosin Vs

Kinoshita, T., Koide, H., Tanaka, Y., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

1017

3SB09 Vibrational Spectroscopic Study on the Reaction Mechanisms of Hemoproteins

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 255 KB

2004

1018

3P178 Distance change between the two neck-linkers of dimeric kinesin as detected by spin-labeling dipolar ESR

Sugata, K., Kusuhara, H., Nakamura, M., Ueki, S., Fajer, Peter G., Arata, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 234 KB

2004

1019

3P189 Detection of stem swing of cytoplasmic dynein by fluorescence resonance energy transfer(FRET) measurements

Mogami, T., Kon, T., Ito, K., Ohkura, R., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 231 KB

2004

1020

3P196 Role of stable ADP binding in the regulation of microtubule sliding activities by axonemal dynein

Inoue, Y., Oiwa, K., Shingyoji, C.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

1021

3P206 Expression and purification of the cytoplasmic regions of PomA, a motor protein of Na^+-driven flagellar motor

Yakushi, T., Takashimizu, I., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

1022

3P208 Purification and crystalization of MotY, a motor protein of Na+-driven flagella, for X-ray crystalography

Shinohara, A., Sakuma, M., Yakushi, T., Imada, K., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 245 KB

2004

1023

3P214 Expression of lipocalin family genes in the Newt olfactory epithelium

Urano, K., Okano, K., Takeuchi, Y., Takahashi, T., Nakamura, T., Sawada, K., Iwasa, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

1024

3P234 Intracellular distribution analysis of estrogen receptor alpha in the hippocampus

Murakami, G., Kominami, S., Mukai, H., Hojo, Y., Kimoto, T., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

1025

3P243 Linear and non-linear hemodynamic response to EEG

Miwakeichi, F., Valdes-Sosa, Pedro, Mizuhara, H., Yamaguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

1026

3P257 Evolution from tRNA gene cluster [including tRNA(Gly)-tRNA(Cys)-tRNA(Leu)] to 16S rRNA

Murayama, Y., Uriu, K., Saito, D., Ishimoto, Y., Ohnishi, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

1027

3P260 Racemization of Alanine in Hydrothermal Environments-Contribution of the concentration of Alanine

Sangu, T., Horie, M., Nemoto, A., Imai, E., Honda, H., Hatori, K., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

1028

3P267 Reconstruction of native protein structure from one-dimensional information

Kinjo, A.R., Nishikawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 249 KB

2004

1029

3P278 Analysis of nuclear protein by using positive charge core index

Sakiyama, N., Horibe, K., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 233 KB

2004

1030

3P286 Computational analyses of eRF1 molecular surface that is important for stop codon interactions

Kim, Oanh, Yura, K., Go, N., Harumoto, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 235 KB

2004

1031

3P316 Boundary-element calculations for effects of low-frequency electric fields on bio-logical cells with localized deformations in shape

Sekine, K., Nagaomo, K., Matsushima, R., Asami, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 274 KB

2004

1032

3SA57 Stereo-array-isotope-labeling(SAIL) technology : A cutting-edge NMR approach for structural genomics

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

1033

10.2142/biophys.44.s276

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 66 KB

2004

1034

10.2142/biophys.44.s277_1

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 283 KB

2004

1035

3SB53 Vesicular Transport : Molecular Mechanisms and Dynamics

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

1036

10.2142/biophys.44.s283

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 5 KB

2004

1037

1SA01 Membrane targeting of IICBGlc protein is required for the rapid degradation of ptsG mRNA in response to metabolic stress

Morita, T., Kawamoto, H., Tanaka, Y., Inada, T., Aiba, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 259 KB

2004

1038

1P018 Biochemical analysis on the binding sites of Fc alpha/mu receptors

Ishikawa, K., Nakagawa, M., Shibuya, A., Azuma, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

1039

1P050 Determinant of protein quaternary structure. : Insight from sequence, structure and function

Nishi, H., Ota, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

1040

1P067 Reduction of metalloproteins by tyrosine-containing oligopeptides

Hirota, S., Okumura, H., Kondoh, T., Funasaki, N., Watanabe, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 242 KB

2004

1041

1P080 Molecular simulation study to examine the possibility of detecting protein dynamic structure by inelastic neutron scattering

Joti, Y., Kitao, A., Go, N.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 236 KB

2004

1042

1P109 Relationship between retinal isomerization and irreversible photobleaching behavior of bacteriorhodopsin at alkaline pH

Yokoyama, Y., Nakano, T., Sonoyama, M., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 256 KB

2004

1043

1SB06 Studies on the F1-ATPase using single-molecule manipulation and micro-fabrication techniques

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 246 KB

2004

1044

1P134 Gene expression regulated by network motif

Fujimoto, Koichi, Ishihara, Shuji, Shibata, Tatsuo

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

1045

1P185 Structural changes on activation of thin filament of the skeletal muscle inhibited force generation

Tamura, T., Wakayama, J., Yagi, N., Fujisawa, T., Iwamoto, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

1046

1P197 Structure of GD3 Ganglioside/Cholesterol Mixture Depending on Temperature and Salts

Hirai, H., Hirai, M., Kasahara, K., Suzuki, N., Yuyama, K., Hayakawa, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

1047

1SD02 Inhibitor design based on the crystal structure of prostaglandin synthase

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

1048

1P219 Phase Behavior of DPPC-Cholesterol Binary Bilayers : Observation by Fluorescent Probe Prodan

Moribayashi, N., Kusube, M., Tamai, N., Matuki, H., Kanesina, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 251 KB

2004

1049

1P230 Monitoring single protein in artificial lipid bilayers which diffusion is decreased by annexin5

Ichikawa, T., Ide, T., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 250 KB

2004

1050

1P246 Low temperature FTIR spectroscopy of squid rhodopsin

Ota, T., Furutani, Y., Terakita, A., Shichida, Y., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 232 KB

2004

1051

1P274 Light-induced structural changes in phytochrome : studied by small-angle X-ray scattering

Nakasako, M., Iwata, T., Inoue, K., Tokutomi, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 241 KB

2004

1052

2P026 Interaction of thioflavin T fluorescence dye with collagen fibrils

Morimoto, K., Kawabata, K., Kunii, S., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 237 KB

2004

1053

2P056 Simulations of peptide fragments of beta2-microglobulin : towards the understanding of the mechanism of amyloid formations

Nishino, M., Sugita, Y., Yoda, T., Okamoto, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

1054

2P067 Investigation of exogous ligand binding mechanism of Nitrophorin4

Uno, T., Moriyama, Y., Hamabe, Y., Tomisugi, Y., Ishikawa, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 268 KB

2004

1055

2P114 Predictive annotation of DNA-binding residues and proteins based on sequence and structure information

Ahmad, Shandar, Gromiha, Michael, Sarai, Akinori

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 240 KB

2004

1056

2P171 Ultrasensitive intracellular calcium response induced by dimerization of epidermal growth factor receptor

Uyemura, T., Takagi, T., Yanagida, T., Sako, Y.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

1057

2P200 Control of morphology and function of Hepatocyte using the elastic substrate

Ichikawa, M., Harada, I., Akaike, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

1058

2P270 Micro-CT of Psedocneorhinus bifasciatus Roelofs,by projection X-ray microscopy

Tanisako, A., Yoshimura, H.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 275 KB

2004

1059

2P318 Control of protein function on semicon-ductor surfaces

Oda, M., Nakayama, T.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 204 KB

2004

1060

3P097 The role of locally stable structure of protein in forming structural topology:molecular dynamics simulation

Koga, N., Chikenji, G., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 244 KB

2004

1061

3P163 Motility and enzymatic activity of Arabidopsis Myosin, MYAI

Hachikubo, Y, Ito, K, Yamamoto, K

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 238 KB

2004

1062

3P166 Single molecule analysis of recombinant Chara myosin motor domain with and without an actinin neck region

Kojima, H., Ito, K., Kimura, S., Yamamoto, K., Oiwa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 268 KB

2004

1063

3P237 The analysis of stress steroid biosynthesis in rat hippocampus

Sonoki, Y, Ishii, H, Hurukawa, A, kawato, S

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 247 KB

2004

1064

3P297 Measurement of VUV circular dichroism spectra by using polarization modulation of undulator radiation-II

Yamada, T., Yagi-Watanabe, K., Tanaka, M., Kaneko, F., Kitada, T., Ohta, Y., Nakagawa, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 267 KB

2004

1065

3P318 2D free space flow control system using thermoreversible gelation of polymer by IR-LASER

Tatsuoka, Masayasu, Shimomae, Tomohiro, Watabe, Shota, Shirasaki, Yoshitaka, Mizuno, Jun, Shoji, Shuichi, Wada, Yasuo, Funatsu, Takashi

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 150 KB

2004

1066

3SC51 Molecular mechanisms of heme enzymes

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

1067

1P055 Molecular dynamics simulation of chloride channel ClC

Suenaga, A., Goto, K., Yeh, Jay, Taiji, M., Toyama, A., Takeuchi, H., Son, Mingyu, Takayama, K., Iwamoto, M., Sato, I., Narahashi, T., Konagaya, A.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 264 KB

2004

1068

1P071 Observation of the interaction manner between antifreeze proteins and ice crystal by using fluorescence labeling method

Yoshida, T., Miura, K., Tanaka, S., Tsuda, S.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 269 KB

2004

1069

1P133 Relation between adipocyte differentiation and morphological/structural variation in single cell

Nagayama, M., Uchida, T., Taira, T., Hoshi, T., Gohara, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

1070

1P184 The effect of muscle length changes on the x-ray diffraction pattern from tetanized frog skeletal muscle

Tanaka, H., Kobayashi, T., Takezawa, Y., Sugimoto, Y., Oshima, K., Wakabayashi, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 261 KB

2004

1071

1P308 Functional analysis of cell network using cultured cardiac myocyte

Kojima, K., Kaneko, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 253 KB

2004

1072

2P121 Phase Transition in Reconstituted Chromatin

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 260 KB

2004

1073

1P002 Domain structure and function of novel transcriptional regulatory protein FMBP-1

Matsumoto, D., Yamaki, T., Kawaguchi, K., Yamamoto, H., Kumaki, Y., Aizawa, T., Takiya, S., Demura, M., Nitta, K.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 273 KB

2004

1074

3P284 Extended search tools in Het-PDB Navi. : A database of interactions between proteins and small molecules

Yamaguchi, A., Tomoda, S., Yura, K., Go, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 272 KB

2004

1075

1P214 Suported lipid bilayer membrane in lo phase formed by vesicle fusion method

Sano, R., Saito, A., Shimauchi, H., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2004

File:

PDF, 217 KB

2004