Volume 45; Issue supplement

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Seibutsu Butsuri
Volume 45; Issue supplement

Seibutsu Butsuri

Volume 45; Issue supplement

1

3P108 Hartree-Fock and DFT calculations for the reaction mechanism of nitric oxide reductase cytochrome P450nor from Fusarium oxysporum

Tsukamoto, K., Akiyama, Y.

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Seibutsu Butsuri

Year:

2005

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PDF, 268 KB

2005

2

10.2142/biophys.45.app48

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Seibutsu Butsuri

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2005

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PDF, 4 KB

2005

3

10.2142/biophys.45.as1

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Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 7.84 MB

english, 2005

4

1P276 Kinetic analysis of photoreacted bacteriorhodopsin by means of fast MEM algorithm

Journal:

Seibutsu Butsuri

Year:

2005

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2005

5

1P277 Counterion switch model in bovine rhodopsin examined by FTIR spectroscopy

Ota, T., Furutani, Y., Kandori, H., Terakita, A., Shichida, Y.

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Seibutsu Butsuri

Year:

2005

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PDF, 265 KB

2005

6

1P278 Comparative analyses of cephalochordate melanopsin with Gq-coupled invertebrate rhodopsin

Terakita, A., Koyanagi, M., Tsukamoto, H., Kubokawa, K., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 265 KB

2005

7

1P279 Characterization of ascidian cyclic nucleotide-gated (CNG) channels

Nakagawa, M., Kamata, K., Miyamoto, Y., Kusakabe, T., Tsuda, M.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 265 KB

2005

8

1P281 Interaction sites of rhodopsin kinase (GRK1) to S-modulin

Torisawa, A., Tachibanaki, S., Kawamura, S.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 238 KB

2005

9

1P282 Improved Prediction of onedimensional protein structures

Kinjo, A.R., Nishikawa, K.

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Seibutsu Butsuri

Year:

2005

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PDF, 238 KB

2005

10

1P284 Prediction of protein-protein interaction using statistical potential

Fukuhara, N., Kawabata, T., Go, N.

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Seibutsu Butsuri

Year:

2005

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PDF, 238 KB

2005

11

1P285 Exhaustive search for protein surface similarities using a grid computing system

Minai, R., Iwasaki, M., Murakmai, H., Matsuo, Y.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 250 KB

2005

12

1P287 Structural analysis of leucine-rich repeat (LRR) varinats in proteinsassociated with human diseases

Matsushima, N., Enhkbayar, Purejav

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Seibutsu Butsuri

Year:

2005

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PDF, 250 KB

2005

13

1P288 Analysis of helix packing in transmembrane proteins using contact map

Hasegawa, H., Nishio, T., Shimizu, T.

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Seibutsu Butsuri

Year:

2005

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PDF, 250 KB

2005

14

1P289 Helical parameters of alpha-helices in proteins

Eahkbayar, Purejav, Osaki, M., Matsushima, N.

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Seibutsu Butsuri

Year:

2005

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PDF, 273 KB

2005

15

1P290 Prediction of interfaces for oligomerizations of G-protein coupled receptors

Nemoto, W., Toh, H.

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Seibutsu Butsuri

Year:

2005

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PDF, 273 KB

2005

16

1P292 Structural based analysis and classification of protein-carbohydrate interactions

Shionyu-Mitsuyama, C., Kinoshita, K., Kidera, A., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 273 KB

2005

17

1P294 Analysis of Amino Acid Conservation in Transmembrane Helices

Watanabe, Y., Nishio, T., Shimizu, T.

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Seibutsu Butsuri

Year:

2005

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2005

18

1P295 Formation of bottleneck on catalytic reaction networks

Qin, Z., Kaneko, K.

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Seibutsu Butsuri

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2005

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2005

19

1P296 Spatiotemporal pattern formation in an array of enzymes : effects of molecular discreteness and fluctuation

Togashi, Y., CASAGRANDE, Vanessa, MIKHAILOV, Alexander S.

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Seibutsu Butsuri

Year:

2005

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PDF, 254 KB

2005

20

1P300 Adaptive response in Gene-Metabolite interaction network

Hoshino, E., Kaneko, K.

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Seibutsu Butsuri

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2005

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2005

21

1P305 Selection of cellular state by molecular fluctuation

Furusawa, C., Kaneko, K.

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Seibutsu Butsuri

Year:

2005

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2005

22

1P306 Analysis of Interaction Between Different Layers in Hierarchy in Biological System using Plasmodium of Physarum Polycephalum

Shirakawa, T., Gunji, Y.P.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 284 KB

2005

23

1P307 Dynamical model of collective motion in multicell systems

Takayanagi, Shin-ichi, Nemoto, Koji

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Seibutsu Butsuri

Year:

2005

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2005

24

1P308 Mathematical model study of amoeba motion

Matsuo, M., Ishihara, S.

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Seibutsu Butsuri

Year:

2005

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2005

25

1P309 Study on Locomotion and Shape of Amoeba

Nishimura, S.I., Sasai, M.

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Seibutsu Butsuri

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2005

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2005

26

1SF05 Protein structures of the innate immune system in invertevrates

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Seibutsu Butsuri

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2005

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2005

27

1SF06 A serine protease zymogen functions as a sensor for the innate immunity of horseshoe crab

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Seibutsu Butsuri

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2005

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2005

28

1P313 Membrane current fluctuations in the modified Oosawa model with Ca-sensitive ion channels

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Seibutsu Butsuri

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2005

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2005

29

1P314 Role of protein polymorphism in path selection in signaling system

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Seibutsu Butsuri

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2005

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2005

30

1P315 Scanner for High-speed AFM

Nakakita, R., Kodera, N., Ando, T.

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Seibutsu Butsuri

Year:

2005

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PDF, 235 KB

2005

31

1P316 High-speed AFM imaging stabilized by control of cantilever excitation using its second harmonic oscillation

Sakashita, M., Kodera, N., Ando, T.

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Seibutsu Butsuri

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2005

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PDF, 235 KB

2005

32

1P319 Height of biological molecules in liquids with AFM

Okajima, T., Tokumoto, H.

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Seibutsu Butsuri

Year:

2005

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PDF, 252 KB

2005

33

1P321 Development of a high-speed atomic force microscope for imaging of dynamic behavior of protein molecules

Kodera, N., Miyagi, A., Yamashita, H., Nakakita, R., Sakashita, M., Ito, H., Uchihashi, T., Ando, T.

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Seibutsu Butsuri

Year:

2005

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2005

34

1P323 Molecular mapping using Pulsed-Force-Mode AFM in solution

Haruta, H., Morii, T., Yoshimura, H., Okada, T., Ogawa, Y., Okada, T.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 267 KB

2005

35

1P326 Single molecule imaging of lipid rafts in normal cells

Sakata-Sogawa, K., Yamasaki, S., Hiroshima, M., Saito, T., Tokunaga, M.

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Seibutsu Butsuri

Year:

2005

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2005

36

1P327 Development of a novel mechano-fluorescence microscope for measurement of DNA/protein interaction at single molecule level II

Yokota, H., Han, YW., Allemand, Jean-Francois, Xi, Xueuang, Croquette, Vincent, Bensimon, David, Harada, Y.

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Seibutsu Butsuri

Year:

2005

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2005

37

1P329 Advanced Microscopy capable of detecting three-dimensional movement with nanometer-scale accuracy

Mizutani, K. Q. T., Okada, T., Uenoyama, A., Masaike, T., Miyata, M., Nishizaka, T.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

38

1P330 Real-time imaging of the gravity signal transduction in Arabidopsis

Saito, K., Watahiki, M., Yamamoto, K., Nagai, T.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 258 KB

2005

39

1P331 A FRET-based technique for imaging polymerized state of intracellular tubulin

Niino, Y., Iguchi, T., Oka, K.

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Seibutsu Butsuri

Year:

2005

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2005

40

1P333 Protein expression profiling for single-cell using microbead array technology

Sasuga, Y., Terada, K., Tani, T., Ohara, O., Harada, Y.

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Seibutsu Butsuri

Year:

2005

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2005

41

1P336 Scanning probe microscopic study on cell-membrane in liquid

Yoshino, T., Matsunaga, S., Nihei, A., Iida, Y., Machida, S., Ohtani, T., sugiyama, S.

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Seibutsu Butsuri

Year:

2005

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2005

42

1P337 Observation of the chromosome by SPM SIS mode

Shigeno, M., Inoue, A.

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Seibutsu Butsuri

Year:

2005

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2005

43

1P342 A new imaging method, high NA apodizedphase contrast microscopy, reveals dynamics of nne structures in living cells

Katoh, K., Otaki, T.

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Seibutsu Butsuri

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2005

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2005

44

1P344 Development of flash contact soft x-ray microscope (FC-SXRM) with selectivity of visual field

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 304 KB

2005

45

1P345 Element Analysis by Projection X-ray Microscopy

Tsuruta, S., Sakata, M., Kawasaki, T., Namiki, H., Yoshimura, H.

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Seibutsu Butsuri

Year:

2005

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PDF, 267 KB

2005

46

1P346 High-speed real-time spectroscopic and ratiometric optical imaging of neuronal activities in hippocampal slices

Tominaga, T., Tominaga, Y., Ichikawa, M.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 267 KB

2005

47

1P348 Labeling and imaging of mRNAs in living cells

Yamagishi, M., Sasuga, Y., Terada, K., Harada, Y., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 267 KB

2005

48

1P349 Real time imaging of specific messenger RNA in a living cell using artifical antisense nucleic acids

Okabe, K., Ikeda, H., Harada, Y., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 143 KB

2005

49

1P350 ln vivo single molecule tracking with Quantum dot in mouse tumor model

Tada, H., Higuchi, H., Watanabe, T., Ohuchi, N.

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Seibutsu Butsuri

Year:

2005

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PDF, 143 KB

2005

50

1SB53 Structural dynamics of actin filaments: its possible roles in force generation

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Seibutsu Butsuri

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2005

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2005

51

1SB54 What we know about the kinesin-microtubule structures

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Seibutsu Butsuri

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2005

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PDF, 240 KB

2005

52

2P001 Analysis of Gating Mechanism of the E-coli Mechanosensitive Channel, MscL, by Computational Chemistry

Sawada, Y., Murase, M., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 279 KB

2005

53

2P004 Effects of lipid membranes on the secondary structure of a prion protein neurotcotic fragment

Miura, T., Yoda, M., Takaku, N., Hirose, T., Takeuchi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

54

2P007 Probing the folding free energy landscape of chignolin

Satoh, D., Terada, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 244 KB

2005

55

2P008 Prediction of protein disordered region from amino acid sequences-Improvement of prediction method with tertiary structure prediction

Ishida, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 244 KB

2005

56

2P009 ab initio Molecular Dynamics simulation : Optimization of biomolecule

Jono, R., Terada, T., Ishitani, R., Nakamura, S., Shimizu, K.

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Seibutsu Butsuri

Year:

2005

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PDF, 265 KB

2005

57

2P010 Analysis of comformational space of segments in globular proteins

Ikeda, K., Tomii, K., Hirokawa, T., Higo, J.

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Seibutsu Butsuri

Year:

2005

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PDF, 265 KB

2005

58

2P015 Crystallization and preliminary X-ray analysis of VAP

Igarashi, T., Takeda, S., Araki, S., Oishi, Y., Mori, H.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 251 KB

2005

59

2P016 Crystal structure of Endophilin BAR domain : two mechanisms to drive membrane curvature

Takeda, S., Masuda, M., Sone, M., Kamioka, Y., Ohki, T., Mori, H., Mochizuki, N.

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Seibutsu Butsuri

Year:

2005

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PDF, 251 KB

2005

60

2P017 Crystal structure of penicillin binding protein 4 from Escherichia coli, both in the native form and covalently linked to antibiotics

Kishida, H., Unzai, S., Park, S.-Y., Tame, Jeremy R.H.

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Seibutsu Butsuri

Year:

2005

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PDF, 277 KB

2005

61

2P019 X-ray crystal structure analysis of xyloglucan-specific exo- and endo-glucanases belonging to glycoside hydrolase family 74

Kondo, H., Yaoi, K., Noro, N., Hiyoshi, A., Sugimoto, H., Suzuki, M., Tsuda, S., Mitsuishi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 277 KB

2005

62

2P021 Solution structures of six flbronectin type III domains of human Neogenin

Tochio, N., Sasagawa, A., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

63

2P022 Solution structure of roadblock from Drosophila melanogaster

Taguchi, M., Kouno, T., Nabesima, Y., Mizuguti, M., Takasugi, H., Mori, Y., Sinoda, H., Kawano, K.

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Seibutsu Butsuri

Year:

2005

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2005

64

2P023 Solution structure of fungal protease inhibitor from silkworm

Kanaori, K., Nakaishi, M., Taniguchi, M., Kamei, K.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

65

2P024 Solution structure of N-terminal PDZ domain from mouse TJP2

Suetake, T., Hayashi, F., Shirouzu, M., Terada, T., Terada, T., Inoue, M., Yabuki, T., Aoki, M., Matsuda, T., Seki, E., Hirota, H., Yoshida, M., Tanaka, A., Hayashizaki, Y., Yokoyama, S.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

66

2P028 Dynamic assembly properties of nonmuscle myosin II isoforms assessed by fluorescence cross-correlation spectroscopy

Mitsuhashi, M., Sakata, H., Kinjo, M., Takahashi, M., Yazawa, M.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

67

2P035 Database of protein structural changes

Amemiya, T., Koike, R., Fuchigami, S., Ikeguchi, M., Kidera, A.

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Seibutsu Butsuri

Year:

2005

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2005

68

2P036 Development of the validator for discriminating between physiological and crystal contacts

Tsuchiya, Y., Kinoshita, K., Ito, N., Nakamura, H.

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Seibutsu Butsuri

Year:

2005

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2005

69

2P037 Calculation of solvation free energy of biomolecules : Evaluation of numerical error of continuum model

Journal:

Seibutsu Butsuri

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2005

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2005

70

2P038 Proton transfer through peptide bond

Kamiya, K., Boero, Mauro, Shiraishi, K., Oshiyama, A.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 261 KB

2005

71

2P039 Analysis of energy flow in the protein

Ishikura, T., Watanabe, H., Yamato, T.

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Seibutsu Butsuri

Year:

2005

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2005

72

1SC51 Dynamic interactions between myristoylated proteins and lipids in the biomembrane supramolecular assemblies

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Seibutsu Butsuri

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2005

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2005

73

2P042 Structural analysis of amyloid fibril formed in human calcitonin peptide DFNKF as revealed by ^C solid-state NMR spectroscopy

Daidoji, K., Fujita, H., Inoue, R., Nishimura, K., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 267 KB

english, 2005

74

2P043 Protein interactions among neck proteins, gp13/gp14, and the connector protein, gp15, of bacteriophage T4

Akhter, Tahmin, Kanamaru, S., Arisaka, F.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

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PDF, 267 KB

english, 2005

75

2P044 Evidence for nanostructural and superstructural differences of peptidase-treated collagen matrices

Morimoto, K., Kunii, S., Shibano, M., Saito, T.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

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PDF, 267 KB

english, 2005

76

2P045 Structural inspection of the auto-inhibition mechanism of GGA proteins

Kamikubo, H., Kawasaki, M., Kato, R., Nakayama, K., Wakatsuki, S., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

77

2P046 Amino acid substitutions on protein-protein interfaces that will cause the change of oligomeric states

Nishi, H., Ota, M.

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Seibutsu Butsuri

Year:

2005

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2005

78

2P049 The analysis of the interaction between MHC class I and CLIP

Takekawa, K., Okuda, A., Nakagawa, M., Azuma, T., Kozono, H.

Journal:

Seibutsu Butsuri

Year:

2005

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PDF, 281 KB

2005

79

2P051 Mass spectrometry on H/D exchange of dihydrofolate reductase mutants at methionine-42

Inno, M., Yamamoto, T., Ohmae, E., Iwakura, M., Gekko, K.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

80

2P052 Variable pressure NMR revealed a conserved exited state conformer between ubiquitin and ubiquitin-like protein NEDD8

Kitahara, R., Sakata, E., Kasuya, T., Yamaguchi, Y., Kato, K., Tanaka, K., Yokoyama, S., Akasaka, K.

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Seibutsu Butsuri

Year:

2005

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2005

81

2P054 The structure-function relationship between a novel DNA binding domain (STPR) and its tandem repeat unit

Matsumoto, D., Yamaki, T., Saito, S., Kawaguchi, K., Yamamoto, H., Kamijima, T., Aizawa, T., Takiya, S., Demura, M., Nitta, K., Kawano, K.

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Seibutsu Butsuri

Year:

2005

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2005

82

2P055 Crystal structure of a putative transcription repressor from C.glutamicum

Gao, Y.-G., Yao, M., Ito, H., Tanaka, I.

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Seibutsu Butsuri

Year:

2005

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2005

83

2P056 Spectroscopic Studies on the Cobalt-Substituted Blasticidin S deaminase from Aspergillus terreus

Nosaka, M., Higuchi, T., Furuichi, M., Kohzuma, T.

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Seibutsu Butsuri

Year:

2005

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2005

84

2P057 pH dependency of type II copper site structure of copper-containing nitrite reductase

Yoshida, Y., Sasakawa, Y., Kohzuma, T.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

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PDF, 251 KB

english, 2005

85

2P060 Protein Structure Prediction on Distributed Computing

Ando, T., Yamato, I., Kobayashi, N., Asahi, Y., Takeda, M.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

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PDF, 251 KB

english, 2005

86

2P063 Molecular Dynamics Simulation of Peptide in the Generalized Isobaric-Isothermal Ensemble

Okumura, H., Okamoto, Y.

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Seibutsu Butsuri

Year:

2005

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2005

87

2P065 Thermodynamic analysis of protein aggregation using highly simplified amino acid sequences

Kuroda, Yutaka, Kato, Atsushi, Soda, Kunitsugu

Journal:

Seibutsu Butsuri

Year:

2005

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2005

88

2P066 Structure of amyloid beta peptide in aqueous environment

Takano, K., Endo, S., Mukaiyama, A., Chon, H., Matsumura, H., Koga, Y., Kanaya, S.

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Seibutsu Butsuri

Year:

2005

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2005

89

2P067 Prevention of thermal aggregation of lysozyme using various polyamine analogues

Okanojo, M., Shiraki, K., Takagi, M.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

90

2P068 Effect of Ca2+ concentration on the stability and folding of canine milk lysozyme

Nakatani, H., Nakao, M., Maki, K., Saeki, K., Aizawa, T., Demura, M., Kawano, K., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

91

2P070 The solvent effect on the structural stability of protein

Yamamoto, M., Tomizawa, Y., Shimizu, A.

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Seibutsu Butsuri

Year:

2005

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2005

92

2P072 NMR investigation of the refolding intermediate of pyrrolidone carboxyl peptidase from a hyperthermophile

Takeuchi, M., Mizuguchi, M., Kouno, T., Ohki, S., Yutani, K., Mori, Y., Shinoda, H., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

93

2P073 Regeneration of Bacteriorhodopsin from thermally unfolded Bacterio-Opsin at alkaline pH

Sugiyama, H., Yokoyama, Y., Ghimire, G.D., Sonoyama, M., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

94

2P075 Ultrasonication-induced amyloid fibril formation of beta_2-microglobulin

Ohhashi, Y., Kihara, M., Naiki, H., Goto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

95

2P079 Implication of the long range interaction formation between the two sub-domains during the folding process of staphylococcal nuclease

Onitsuka, M., Kamikubo, H., Yamazaki, Y., Imamoto, Y., Kataoka, M.

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Seibutsu Butsuri

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2005

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2005

96

1SC52 Signal transduction in the induced microdomains in the cell membrane: single-molecule approach

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Seibutsu Butsuri

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2005

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2005

97

1SC53 Molecular components in the membrane microdomain of mammalian central nervous system

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Seibutsu Butsuri

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2005

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2005

98

1SC54 Membrane lipid dynamics and cellular morphogenesis

Umeda, M., Taniuchi, K., Inadome, H., Shishioh, N., Kato, U.

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Seibutsu Butsuri

Year:

2005

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2005

99

2P081 Effects of glycerol on disulfide regeneration processes of 2SS[6-127,64-80] variants of lysozyme

Okamoto, K., Noda, Y., Tachibana, H., Segawa, S.

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Seibutsu Butsuri

Year:

2005

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2005

100

2P083 Symmetry Breaking in Protein Folding

Itoh, K., Sasai, M.

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Seibutsu Butsuri

Year:

2005

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2005

101

2P085 Development of the fluorescence detection device to observe single molecule dynamics of protein folding for extended periods

Maeda, A., Kinoshita, M., Konno, T., Goto, Y., Takahashi, S.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

102

2P086 Analysis of factors responsible for enhanced thermostability of protein : systematical analysis

Yokota, K., Sato, K., Ohki, S.

Journal:

Seibutsu Butsuri

Year:

2005

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2005

103

2P088 Development of the nanosecond resolution laser temperature-jump system using continuous wavelength light probe

Kamatari, Y.O., Nakamura, H.K., Matsumoto, T., Kuwata, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

104

2P089 Time-resolved fluorescence and resonance raman measurements of the initial collapse in cytochrome c folding

Matsumoto, S., Yane, A., Goto, Y., Hashida, M., Fujita, M., Nakashima, S., Takahashi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

105

2P092 Effect of pressure on protein dynamical transition studied by molecular dynamics Simulation

Nakagawa, H., Joti, Y., Kataoka, M., Go, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

106

2P093 The secondary structural stability of a coiled coil (GCN4-pl) peptide against temperature and pressure

Imamura, H., Takekiyo, T., Taniguchi, Y., Isogai, Y., Kato, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

107

2P094 Roles of translational movement of water molecules in protein stability : physics of thermal and pressure denaturations

Harano, Y., Kinoshita, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

108

2P095 Non-linear cooperation of solution components that can promote human amyloidgenesis

Konno, T., Morii, T., Oiki, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

109

2P096 Inclusion systems of CD with amino acids in aqueous solution as revealed by volume

Kamiyama, T., Yamane, T., Kitajuku, S., Kimura, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

110

2P097 A Development of MD method using a modification of the Tsallis distribution

Horie, M., Fukuda, I., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

111

2P098 Development of the Method of Hybrid QM/MM Simulation including chemical bond on QM/MM boundary

Nakata, K., Yonezawa, Y., Nakamura, H., Takada, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

112

2P099 Study on the interaction of pi-electron of Benzene and Water molecule using QM/MM simulation

Yonezawa, Y., Nakata, K., Takada, T., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

113

2P101 Development of new solid-state NMR techniques of low sample heating for characterization of hydrated biomolecules

Nishimura, K., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

114

2P103 Immobilization of proteins to silica substrate employing fusion tags for surface forces mesurement of interaction

Yamaguchi, T., Suzuki, T., Morikawa, K., Toyoshima, Y., Syouda, S., Kurihara, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

115

2P104 Prediction of ligand-binding sites of proteins by the 3D-RISM theory : Waterbinding sites of lysozyme

Imai, T., Hiraoka, R., KOVALENKO, Andriv, Hirata, F.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

116

2P105 fast unbiased multiple reference alignment method

Kawata, M., Sato, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

117

2P106 A new method for refinement of protein structure with SAXS constraints

Kojima, M., Timchenk, Alexander, Higo, J., Ito, K., Kihara, K., Takahashi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

118

2P108 New strategy for proteome analysis of urine proteins

Okusa, H., Matsumoto, K., Baba, S., Ohishi, M., Kodera, Y., Maeda, T., Kuruma, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

119

2P111 Effect of the point spread function of XRII-CCD detector on WAXS patterns

Inano, D., Sugimoto, Y., Wakabayashi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

120

2P113 Spectral Clustering of Single Particle Analysis in Electron Microscopy

Ueno, Y., Umeyama, S., Kawata, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

121

2P116 Quantitative single molecule FRET measurement for structural dynamics study

Sugawa, M., Arai, Y., Iwane, A.H., Ishii, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

122

2P119 Development of potential maps for amino-acid side chains in solution

Kimura, N., Yoshida, D., Iwaoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

123

1SD51 Network dynamics and information

Watanabe, S., Ogawa, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

124

1SD53 Latent stereotypy and metastability in Spontaneous activity in the neocortex

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

125

2P122 Fabrication of freezing with controlling apparratus temperature and humidity for electron cryo-microscopy

Hirai, C., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

126

2P124 Kinetics analyze of DNA hybridization

Kitajima, A., Takinoue, M., Suyama, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

127

2P131 Dielectric Spectroscopy of Short Oligo DNA : Effects of Hybridization

Omori, S., Katsumoto, Y., Asami, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

128

2P133 Spectroscopic analysis of DNA duplex including T-Hg-T base pairs

Oda, S., Yamaguchi, H., Ono, A., Kojima, C., Kondo, Y., Tanaka, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

129

2P134 Analysis of sequence-dependent properties of DNA by molecular dynamics simulation

Fujii, S., Takenaka, S., Kono, H., Go, N., Aarai, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

130

2P135 Specific binding of metal cation to mismatch base Pair : Development of novel strategy for single nucleotide polymorphism (SNP) genotyping

Torigoe, H., Kawahashi, K., Takamori, A., Kozasa, T., Ono, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

131

2P136 Single molecular measurement of the binding constant of ethidium bromide to DNA

Hayashi, M., Harada, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

132

2P138 Fluorescence correlation spectroscopy and fluorescent polarization measurement of DNA/YOYO complex

Shimizu, M., Sasaki, S., Tsuruoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

133

2P139 Elastic responses and visualization of a single collapsed DNA in stretching

Murayama, Y., Ishida, R., Sano, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

134

2P140 Synthesis of Long-Template DNA by using Enzymatic Reaction and Regular Alignment of Au-particle

Tanaka, S., Fritzsde, Wolfgang, Sako, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

135

2P142 Inhibition of RNA-protein interaction by RNA-RNA interaction

Yano, A., Harada, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

136

2P143 Balance of Direct Readout and Indirect Readout Contributions to Protein-DNA Recognition

Kono, H., Kumar, Shaji, Ahmad, Shandar, Arauzo Bravo, Marcos J, Fujii, S., Go, N., Sarai, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

137

2P145 Molecular Dynamics Simulations of DNA : Application to the Specificity of Protein-DNA Recognition

Arauzo-Bravo, Marcos, Kono, H., Fujii, S., Sarai, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

138

2P146 Analysis of branch migration of Holliday junction model using molecular dynamics simulation

Ishida, H., Go, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

139

2P147 Transition on the higher-order structure of giant DNA speficic to the sequence in cationic oligopeptide

Morita, H., Hazemoto, N., Akitaya, T., Yoshikawa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

140

2P148 Structural transition on the higher-order structure of giant DNA induced by oligopeptide containing histidine, or acetylated lysine

Takase, K., Umeda, N., Tsuda, A., Hazemoto, N., Murata, S., Yoshikawa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

141

2P150 Elucidation of molecular mechanism for the 'catch' state of invertebrate smooth muscle by electron cryo-microscopy

Mise, H., Yasunaga, T., Yoshio, M., Yamada, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

142

2P151 Visualization of the ATP hydrolysis intermediate of myosin II by electron cryo-microscopy

Ohta, Y., Umeki, N., Maruta, S., Katayama, E., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

143

2P156 Structural basis for Ca2+-regulated muscle relaxation at interaction sites of troponin with actin and tropomyosin

Murakami, K., Yumoto, F., Ohki, S., Yasunaga, T., Tanokura, M., Wakabayashi, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

144

2P159 Novel function of Spura-molecular complex found in osmotic response of actin filaments

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

145

1SD55 Spatio-temporal appraisal of serotonin effects on functions of an insect brain

Okada, K., Kanzaki, R.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

146

1SD57 Dendritic integration and extraction of sensory information in single neuron

Ogawa, H., Oka, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

147

2P161 Dynamics and orientation of troponin C studied by ESR using bifunctional chiral spin labels

Nakamura, M., Chatani, S., Yamamoto, Y., Arata, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

148

2P165 Extension and fatigue of skeletal muscle partly release restricted water in the myofilament lattice

Takemori, S., Yamaguchi, M., Kimura, M., Ohno, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

149

2P166 The inhibition of sliding movement of actin filament by crosslinked tropomyosin

Mizuno, H., H., Hajime

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

150

2P168 fluctuations of Speckled actin decorated with Tn-TM

Takasu, H., H., Hajime

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

151

2P170 Rate of energy dissipation of Brownian motor models - estimation by quantifying the correlation and the response functions

Harada, T., Sasa, S. -i.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 251 KB

2005

152

2P171 Observation of stepwise movements of motor proteins in living cells using new FIONA method

Watanabe, TM, Higuchi, H

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 251 KB

2005

153

2P173 Molecular mechanisms of the rotary motor F1-ATPase : molecular dynamics simulation

Koga, N., Okazaki, K., Takeuchi, S., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

154

2P174 Analysis of elastic coupling of ATP synthase with single-molecule manipulation and microfabrication techniques

Hirono-Hara, Y., Takeuchi, S., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

155

2P177 Structure of central stalk subunit F in V type ATPase/synthase

Makyoio, H., Iwata, S., Yoshida, M., Yokoyama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

156

2P179 The affinity of nucleotide for F_1-ATPase depends on the angle of the γ subunit

Adachi, K., Nishizaka, T., Noji, H., Itoh, H., Oiwa, K., Yoshida, M., Kinosita, K. Jr.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

157

2P183 Determination of the cDNA sequence of a Chlamydomonas single-headed axonemal dynein heavy chain

Yagi, Toshiki, Hirono, Masafumi, Kamiya, Ritsu

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

158

2P185 The dissection of intra molecular communications between the ATPase site and microtubulebinding site in the dynein heavy chain

Kon, T., Imamura, K., Ohkura, R., Autoh, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

159

2P187 Characterization of an SH1 helix mutant of myosin

Hanamoto, D., Iwai, S., Sutoh, K., Chaen, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

160

2P189 Function of MAP2/MAP4/tau superfamily in microtubular supramolecular-structure

Tokuraku, K., Noguchi, T., Nishie, M., Matsushima, K., Kotani, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

161

2P191 Energy landscape of the interaction between an actin filament and a myosin molecule

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

162

2P193 Temperature Dependence of Myosin V Motility

Inoue, T., Kubota, H., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

163

2P195 Watching leg motion in walking myosin V

Shiroguchi, K., Kinosita, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

164

2P196 Processive movement of Myosin V without swing of lever arm domain

Komori, Y., Iwane, A.H., Ikebe, M., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

165

2P200 Photoregulation of Calmodulin activity by incorporated photochromic molecule

Shishido, H., Yamada, M., Suzuki, A., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

166

1SE52 Experimental approaches for systematic analyses of biomolecular interactions

Journal:

Seibutsu Butsuri

Year:

2005

File:

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2005

167

1SE55 Structural insight into meeting and parting complexes of proteins and RNA(s)

Numata, T., Fukai, S., Oshikane, Y., Nakamura, Y., Suzuki, T., Nureki, O.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

168

2P203 Molecular dynamics simulation of actomyosin system using coarse-grained model III

Terada, T.P., Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

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2005

169

2P206 The flagellar P-ring component protein FlgI of Escherichia coli : Analysis of its intramolecular disulfide bond and ring assembly

Hizukuri, Y., Yakushi, T., Kawagishi, I., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

170

2P209 Subcellular localization of the polar-flagellar number regulators FlhF and FlhG in Vibrio aginolyticus

Kusumoto, A., Shinohara, A., Yakushi, T., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

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2005

171

2P210 Observation of GFP-fused rotor protein in the rotating flagellar motor

Fukuoka, H., Sowa, Y., Yorimitsu, T., Ishijima, A., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

172

2P212 Quantitative analysis of the hop diffusion of membrane molecules : theory and tracking by high-speed single fluorescent molecule imaging

Shan, X.-Y., Ritchie, Ken, Fujiwara, T., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

173

2P215 Live cell imaging of single GLUT4 molecule in adipocyte using semiconductor nano crystal

Fujita, H., Watanabe, T., Nedachi, T., Higuchi, H, ., Kanzaki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

174

2P216 Detection of Racl recruitment to focal adhesion by single fluorescent molecule tracking

Shibata, A., Nagai, R., K., Keiji, Tatematsu, M., Kobayashi, T., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

175

2P217 Molecular mechanism of nucleocytoplasmic transport elucidated by single molecule imaging

Tokunaga, M., Imamoto, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

176

2P218 Analysis of the cell nucleolar microenvironment and the effects of physiological conditions in cell using Molecular Rulers

Pack, C., Saito, K., Tamura, M., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

177

2P219 Regulation of the dynamic instability of microtubules by the projection domain of heat-stable MAPs

Permana, Sofy, Hisanaga, S., Itoh, J.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

178

2P221 Self-organization of stress fibers from F-actin meshwork

Hirata, H., Tatsumi, H., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

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2005

179

2P223 Identification of a novel actin-related protein in Tetrahymena cilia

Kato-Minoura, T., Kuribara, S., Kato, M., Numata, O.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

180

2P225 Design a high strength gel capable of cellular proliferation

Chen, Y.M., Yasuda, K., Osada, Y., Gong, Jian Pine

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

181

2P226 Dynamic behavior of edndothelial cells on hydrogels

Ogawa, R., Chen, Y.M., Kakugo, A., Furukawa, H., Gong, Jian Pin, Osada, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

182

2P228 Subcellular localization and clustering of the redox sensor Aer of Escherichia coli

Ohta, N., Banno, S., Obata, Y., Shiomi, D., Homma, M., Kawagishi,

Journal:

Seibutsu Butsuri

Year:

2005

File:

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2005

183

2P229 Expression and purification of the ligand-binding domain of the Salmonella typhimurium citrate chemoreceptor Tcp

Hotta, Y., Iwama, T., Homma, M., Kasagishi, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

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2005

184

2P230 G protein shuttling between cytoplasm and membrane in Dictyostelium

Miyanaga, Y., Ueda, M., Kuwayama, H., Ynagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

185

2P231 Subcellular localization of the bacterial chemotactic adaptation enzyme CheB regulated by its conformational change

Banno, S., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

186

2P235 A model for chemotaxis

Inoue, M., Kaneko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

187

2P237 Microscopic analysis of neutrophil cell mobility in novel 3-D network collagen matrix lacking telopeptides

Kunii, S., Saito, T., Shibano, M., Morimoto, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

188

2P239 Conformational analysis of adrenocorticotropic hormone (ACTH)bound to un-, and saturated phospholipid bilayers using solid state NMR

Myoga, H., Nishimura, K., Narita, M., Kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

189

2P240 Conformational analysis of alpha-MSH bound to phospholipids bilayers using solid state NMR

Takeda, E., Nishimura, K., Kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

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2005

190

2SA02 Attempt of Gedanken Experiment for Understanding of Chemo-mechanics in Sliding Machines

Journal:

Seibutsu Butsuri

Year:

2005

File:

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2005

191

2P241 Effect of Positively Charged Short Peptides on Stability of Cubic Phases of DOPA/MO Membranes

Masum, Shah Md, Li, Shu Jie, Awad, Tarek, Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 238 KB

english, 2005

192

2P247 What environment does laurdan sense?

Ohba, T., Ohki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

193

2P248 Structure analysis of monoolein cubic phase using Grastecki-Holyst simple model

Takahashi, H., Abe, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

194

2P253 Local morphological changes of liposome networks

Fukagawa, A., Nomura, M., Ito, K., Akiyoshi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

195

2P257 Structural analysis of intercellular lipids in skin stratum corneum using a micro X-ray beam

Ohta, N., Oka, T., Inoue, K., Yagi, N., Hatta, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 287 KB

2005

196

2P261 Synthesis of fluorescent agonist suitable for single molecule measurement of channel protein

Aoki, T., Yoshimura, Y., Fujimoto, K., Ide, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

197

2P262 Simultaneous measurement of electrical and optical properties of single BK channel : Immobilization by annexin 5

Takeuchi, Y., Ichikawa, T., Aoki, T., Ide, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

198

2P263 Immobilization of a channel protein in planar bilyers for simultaneous optical and electrical recording of single drug bindings

Ide, T., Takeuchi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

199

2P264 Visualization and current recordings of single mechanosensitive channels : toward an understanding of structural basis of channel gating

Machiyama, H., Tatsumi, H., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

200

2P266 Analysis of fibrillation mechanism by myocardial multicellular model

Takahashi, M., Yashima, K., Hotta, K., Oka, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

201

2P268 Probing cytoplasmic domain of KcsA channel by use of surface plasmon resonance signal

Iwamoto, M., Shimizu, H., Inoue, F., Konno, T., Nihei, A., Sasaki, C., Oiki, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

202

2P271 Assignment of the Hydrogen-out-of-plane Vibrations in the K intermediate of pharaonis Phoborhodopsin

Furutani, Y., Sudo, Y., Wada, A., Ito, M., Kamo, N., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

203

2P274 Study on the dynamics of interaction between sensoryrhodopsin II D75N mutant and Transducer protein

Inoue, K., Sasaki, J., Terazima, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

204

2P275 Low-temperature FTIR spectroscopy of the azide-bound Halorhodopsin that pumps protons

Muneda, N., Shibata, M., Sasaki, T., Demura, M., Kamo, N., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

205

2SA04 Single molecule measurement of the bacterial flagellar motor

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

206

2SA05Ratchet model, single molecule observation of F_1 motor, and energetics

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

207

2P282 Comparative analyses of activation mechanisms of rhodopsin using site-directed mutagenesis

Tsukamoto, H., Terakita, A., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

208

2P284 Effect of Schiff base protonation on the quantum yield of visual pigments

Tsutsui, K., Imai, H., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

209

2P285 Visual cycle of vertebrate taken place at photoreceptor

Takimoto, N., Iwamoto, H., Horie, T., Kusakabe, T., Tsuda, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

210

2P286 Molecular properties Of mouse visual pigments

Imai, H., Sakurai, K., Onishi, A., Chisaka, O., Shichid, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

211

2P287 Origin of vertebrate retina composed of ON-type photoreceptors and OFF-type photoreceptors

Toda, Y., Horie, T., Takimoto, N., Nakagawa, M., Kusakabe, T., Horiguchi, H., Hariyama, T., Tsuda, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

212

2P288 Preliminary X-ray crystallographic analysis of squid rhodopsin

Murakami, M., Kouyama, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

213

2P289 Analysis on the conformational change dynamics around LOV2 domain of Phototropin

Eitoku, T., Nakasone, Y., Matsuoka, D., Tokutomi, S., Terazima, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

214

2P292 C=O Stretching Vibrations from FMN and Peptide Backbone Identified by ^C Labeling in the LOV2 domain of Adiantum Phytochrome3

Iwata, T., Nozaki, D., Sato, Y., Sato, K., Nishina, Y., Shiga, K., Tokutomi, S., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

215

2P293 Mutational analyses of FAD-binding BLUF domain of AppA for a signaling state

Masuda, S., Hasegawa, K., Ono, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

216

2P294 Analysis of the structural change on the cytoplasmic surface of metabotropic glutamate receptor by the disulfide cross-linking strategy

Yamashita, T., Teraikita, A., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

217

2P300 Comprehensive functional classification and identification 87 prokayotic and 21 eukaryotic transmembrane proteins

Yoshida, S., Matsuya, M., Atai, M., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

218

2P301 Definition and classification of functional domains on loop regions of prokaryotic transmembrane proteins

Hirayama, S., Matsushiro, K., Yoshida, S, Arao, M., Mizuta, S., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

219

2P302 Comprehensive detection of transmembrane protein genes associated with epilepsy

Inoue, Y., Kanai, K., Mizuta, S., Okada, M., Kaneko, S., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

220

2P303 FCANAL : A structure based protein function prediction method. Application to enzymes and binding proteins

Suzuki, A., Ando, T., Matsumura, A., Sakao, H., Yamato, I., Miyazaki, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

221

2P304 Structure-based bioinformatics analyses of protein-RNA interface toward developing a computational method to predict protein-RNA interface

Kim, Oanh, Yura, K., Go, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

222

2P305 Computational Prediction of Receptor-G protein Binding Selectivity

Suwa, M., Yabuki, Y., Muramatsu, T., Hirokawa, T., Mukai, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

223

2P306 Determination of optimum BTPs for classification/identification of GPCRs based on the classification framework of GPCRDB

Yamazaki, Y., Nakamura, H., Inoue, Y., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

224

2P308 Stochastics dynamics of coupled repressilators

Yoda, M., Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

225

2P312 Localized single molecule surface enhanced resonance raman scattering

Watanabe, K., Tsunoda, M., Ueno, T., Yamagishi, M., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

226

2P314 Boundary-element calculations of electrorotation spectra for spherical cells

Sekine, K., Cui, H.S., Matsushima, E., Takeda, T., Asami, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

227

2P316 Dissection and recovery of chromosome fragments and BAC clone mapping by scanning probe microscopy

Sugiyama, S., Tsukamoto, K., Kusazaki, S., Yoshino, T., Sasou, M., Wakayama, J., Yamamoto, K., Ohtani, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

228

2P317 Quantification of the size of nanoparticles on soft materials using atomic force microscopy

Oikawa, K., Kim, H., Kira, A., Okano, K., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

229

2P319 Measurement of antigen-antibody interactions by AFM

Wakayama, J., Akanuma, S., Sekiguchi, H., Ohtani, T., Sugiyama, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

230

2P320 Development of a novel microscope for sirmultaneous observation of mechanochemical coupling

Ariga, T., Komori, T., Nishikawa, S., Iwane, A., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

231

Committee for Gender equality and the young researcher problem : Gender Equality movement Symposium For improving research-activities support

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 218 KB

2005

232

1SA51 Biophysics of mechanosensitive channels in bacteria("Japan-Australia Joint Symposium on Biophysics" (English Session))

Martinac, Boris

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 218 KB

2005

233

1SA53 Applications of FRET in Biophysics("Japan-Australia Joint Symposium on Biophysics" (English Session))

dos Remedies, CG, Chhabra, D, Dedova, I, Safer, D, De La Cruz, E

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 218 KB

2005

234

2P323 Quantitative Analysis of Expressed Rare Messages in Single Cell Level using Gold Nano-Particles

Kim, H., Kira, A., Kohno, H., Matsumura, K., Orita, K., Oikawa, K., Okano, K., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 286 KB

2005

235

2P325 Analyzing the single cell response of macrophage to the antigen stimulation (I) Development of antigen-stimulation and analysis system

Shindou, H., Orita, K., Matsumura, K., Wakamoto, Y., Ishimoto, H., Yanagihara, K., Kohno, S., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 290 KB

2005

236

2P326 Analyzing the single cell response of macrophage to the antigen stimulation (II) Processing of acquired information in the single cell

Orita, K., Shindou, H., Matsumura, K., Wakamoto, Y., Ishimoto, H., Yanagihara, K., Kohno, S., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 290 KB

2005

237

2P331 Towards a fast small DNA sequencer using real-time electrochemical monitoring of DNA replication reaction

Iizuka, T., Tomita, M., Tanaka, T., Kanemura, T., Husimi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

238

2P332 Stabilzation of the baseline drift on brain activity observation by NIRS using wavelength differential method

Yamada, T., Umeyama, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

239

3P001 The Changes of Database Enrichment for in silico screening by using modeling proteins

Omagari, K., Fukunishi, Y., Kubota, S., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

240

3P005 Analysis of native contact pattern of 48-residue segments taken from proteins

Ito, J., Mitomo, D., Ikeda, K., Higo, J.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

241

3P008 Properties of Residue Pair Correlation Functions Based on the Potential Derived from the Interresidue Average Distance Statistics

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

242

3P011 Crystallization and preliminary X-ray crystallographic analysis of 35 kDa hemin binding protein in Porphyromonas gingivalis

Kakuda, Shinji, Horigome, Daisuke, Shibata, Yasuko, Suzuki, Mamoru, Shiroza, Teruaki, Abiko, Yoshimitsu, Nakagawa, Atushi

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

243

3P012 X-ray structural study of the activation mechanisim of the active site of [NiFe]hydrogenase

Higuchi, Y., Miyabe, N., Nakahara, A., Ogata, H., Komori, H., Shibata, N., Hirota, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

244

3P013 Crystal structure of the complex between metapyrocatechase and its inhibitor

Kita, A., Ishida, T., Tanaka, H., Morimoto, Y., Horiike, K., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 240 KB

2005

245

3P014 Crystallographic study of yeast Sec2, a guanine nucleotide exchange factor (GEF) for yeast Rab GTPase, Sec4

Sato, Y., Fukai, S., Nureki, O.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 240 KB

2005

246

3P020 Determination of the conformation and configuration of arthrofactin by NMR

Kondo, Y., Morikawa, M., Ikegami, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 284 KB

2005

247

2SC01 Biological roles of lipid microdomain in the central nervous systems

Hirabayashi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

248

2SC02 Glycosphingolipid-binding proteins and lipid raft signaling

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

249

2SC03 Relationship between the substrate specificities and lipid-microdomain localization of glycosyltransferases in Saccharomyces cerevisiae

Uemura, S., Kihara, A., Inokuchi, J., Igarashi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

250

3P025 Single Particle Analysis of Image Data Acquired by Zernike Phase Contrast Transmission Electron Microscope

Danev, Radostin, Nagayama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

251

3P026 The effect of electron dose in single particle image analysis

Kato, T., Yoshida, T., Ohkubo, T., Kobayashi, Y., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

252

3P027 Single particle analysis of non-selective cationpermeable channel TRPC3

Mio, K., Ogura, T., Hara, Y., Mori, Y., Sato, C.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

253

3P029 Efficient Sampling of Specific Conformations of Peptides with Generalized Multicanonical Molecular Dynamics Method

Itoh, S.G., Okamoto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

254

3P030 Analysis of the hydration structure of proteins in the non-native state by molecular dynamics simulation

Miyamoto, T., Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

255

3P031 Role of Hydrophobic Clusters in Protein Folding

Matsumoto, H., Ismail, E. Rozi, Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

256

3P032 Molecular Dynamics of lysozyme variants lacking a disulfide bridge : Temperature dependence of molecular dynamics simulation

Mizuguchi, T., Okada, O., Segawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

257

3P033 Development of a Technique of Dynamical Structure Prediction of Proteins Using a Coarse-grained Model

Sasaki, T.N., Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 247 KB

2005

258

3P034 Reconstruction of multi-dimensional free energy landscape from single molecule time series and molecular memory

Baba, A., Komatsuzaki, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 247 KB

2005

259

3P035 Search for thermostabilizing factors of homologous cold shock proteins based on the amino acid sequences, 3D structures and MD simulations

Motono, C., Gromiha, Michael, Kumar, Sandeep

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 247 KB

2005

260

3P037 The unfolding simulation of goat α-lactalbumin

Oroguchi, T., Ikeguchi, M., Kidera, A., Saeki, K., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

261

3P038 Molecular Simulation Study to Reveal Origin of Protein Boson Peak

Joti, Y., Kitao, A., Go, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

262

3P039 Revisit of Crowding Problems for Cytoplasm Using the OZ-HNC Theory

Akiyama, R., Karino, Y., Kinoshita, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

263

3P041 Principal Component Analysis and Relaxation Mode Analysis of a Peptide

Mitsutake, A., Iijima, H., Takano, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

264

3P043 Structural Characteistic of Dihydrofolate Reductase from Deep-sea Bacteria by High Pressure NMR

Hata, K., Ying, Xu, Ohmae, E., Gekko, K., Kitahara, R., Yokoyama, S., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

265

3P044 Amyloid formation of transthyretin with fibril seeds

Igarashi, K., Mizuguchi, M., Nabesima, Y., Mori, Y., Shinoda, H., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

266

3P045 Direct observation ofβ_2-microglobulin amyloid fibril formation at neutral pH

Ozawa, D., Ban, T., Kameda, A., Naiki, H., Goto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

267

3P049 Activation mechanism of hyperthermophilic glutamate dehydrogenase produced as an inactive misfolded form in Escherichia coli

Goda, S., Kojim, M., Nishikawa, Y., Sakuraba, H., Hiragi, Y., Ohshima, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 285 KB

2005

268

3P050 Non-native states of protein studied in a residue-specific manner in the presence of different kinds of solvent additives

Kimura, M., Zhang, C., Matso, K., Noda, Y., Tachibana, H., Segawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 285 KB

2005

269

3P054 Mechanism stabilizing non-native alpha-helical structure in partially folded states of equine beta-lactoglobulin

Yamada, Y., Nakagawa, K., Yajima, T., Saito, K., Tokushima, A., Ikeguchi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

270

3P057 The conformational characterization of the partially unfolded state by the time-resolved fluorescence spectroscopy of single-Trp protein

Fukunaga, Y., Yamashita, K., Nishimoto, E., Yamashita, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 276 KB

2005

271

3P059 Normal Mode Analysis of Isothermal Compressibility of Mutant Proteins

Mimura, S., Yamato, T., Gekko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 276 KB

2005

272

3P060 FT-IR spectroscopic study on the secondary structure of pressure induced aggregates of equine serum albumin

Okuno, A., Kato, M., Taniguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 276 KB

2005

273

3P061 Increased Protein Transsplicing Reacion by Optimized Reaction Conditions

Kamioka, T., Souya, S., Kuroda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

274

2SC06 Development of DDS Nanoparticles Bearing Complex Carbohydrate Ligands and Their Medicinal Applications

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

275

2SD02 Tension dependent regulation of actin dynamics in vivo and vitro

Hayakawa, K., Tatsumi, H., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

276

3P066 Comparative study on dynamic structures of homologous proteins by normal mode analysis

Wako, H., Otsuka, M., Tomizawa, Y., Kato, M., Endo, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 280 KB

2005

277

3P071 Functionalization of Photoactive Yellow Protein Having Simplified AminonAcid Sequence

Nakata, K., Shirai, K., Imamoto, Y., Yamazaki, Y., Kamikubo, H., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

278

3P074 Highthroughput screening of mutant AKR enzymes using genotypephenotype linked microarray evolution reactor chip

Hosoi, Y., Biyan, Manish, Nemoto, T., Akagi, T., Ichiki, T.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 245 KB

english, 2005

279

3P075 Genotype-phenotype linked Microarray Evolution Reactor: Construction and screening a new fluorescent protein from random-sequence space

Biyani, Manish, Hosoi, Y., Ichiki, T., Nemoto, N.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 245 KB

english, 2005

280

3P076 New species of in vitro virus

Arai, H., Ueno, S., Suzuki, M., Husimi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 245 KB

english, 2005

281

3PO77 In vitro compartmentalization by liposome : sorting and gene selection by FACS

Sunami, T., Sato, K., Tsukada, K., Matsuura, T., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

282

3P078 Function of DNA binding protein Zif268 is tolerant to domain substitution

Nobuhara, K., Matsuura, T., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

283

3P081 Heme Binding in Iron Response Regulator (Irr) and its Regulation Mechanism

Nakagaki, M., Uchida, T., Kobayashi, K., Ishikawa, H., Kitagawa, H., Iwai, K., O'Brian, Mark, Ishimori, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

284

3P083 Protein Conformational Changes in the EC DOS Protein upon Redox Change or Ligand Binding Probed by UV Resonance Raman Spectroscopy

El-Mashtoly, Samir, Kurokawa, Hirofumi, Shimizu, Toru, Kitagawa, Teizo

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

285

3P084 Heme catabolism by Glycine max (soy bean) heme cxygenase-1,SbHO-1

Goya, Tomohiko, Zhang, Xuhong, Yoshida, Tadashi, Migita, Catharina T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

286

3P085 Circular dichroism of recombinant human hemoglobin

Nagai, M., Nagai, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

287

3P087 Amino acid sequences of ancestral myoglobin inferred by the maximum likelihood method

Isahida, M., Yasuda, A., Yamasaki, I., Ota, M., Isogai, Y., Imai, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

288

3P088 Allosteric properties of the hemoglobin from a bony fish, the bluefin tuna (Thunnus orientalis)

Kenjo, T., Tsunesige, A., Miyazaki, G., Imai, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

289

3P089 Oxygen binding properties of myoglobin and hemoglobin of diving mammals

Koyanagi, M., Nagatomo, S., Fujise, Y., Yamada, T., Mita, H., Yamamoto, Y., Imai, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

290

3P090 Origin of Functional Difference in Tyrosinate-ligated Homologous Enzymes, Coral Allene Oxide Synthase and Catalase

Tosha, T., Uchida, T., Brash, Alan R., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

291

3P091 Structural change of the heme-containing transcriptional activator CooA on DNA binding: A resonance Raman spectroscopic study

Kubo, M., Inagaki, S., Uchida, T., Aono, S., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

292

3P092 Dynamics of heme structure following dissociation of dioxygen : a study on myoglobin

Murakawa, Y., Mizutani, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

293

3P098 hanism of proton pumping by bovine heart cytochrome oxidase: Study on a pumping site mutant Asp51Gly

Shimokata, K., Katayama, Y., Suematsu, M., Tsukihara, T., Yoshikawa, S., Shimada, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

294

3P102 Resonance Raman Spectra of Cytochrome c Oxidase Reconstituted in Phospholipid Vesicles

Yamada, M., Yamaguchi, S., Ogura, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

295

3P104 Spectroscopic Characterization of Heme Coordination Structure in Iron Regulatory Protein 2 (IRP2)

Endo, R., Ishikawa, H., Uchida, T., Kobayashi, K., Kitagawa, T., Iwai, K., Ishimori, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

296

2SD04 Control and measurement of the beating synchronization in cardiomyocytes

Kaneko, T., Kojima, K., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

297

2SD05 Tensional Homeostasis: Stabilization of Intracellular Tension Responding to External Stress

Mizutani, T., Haga, H., Takahashi, M., Koyama, Y., Kawabata, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

298

3P111 Analysis of the CO-bound structure of cytochrome c oxidase

Kanda, K., Muramoto, K., Shinzawa-Itoh, K., Yamashita, E., Aoyama, H., Tukihara, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

299

3P112 Analysis of the cyanide-bound structure of cytochrome c oxidase in the reduced state

Ohta, K., Muramoto, K., Shinzawa-Itoh, K., Yamashita, E., Aoyama, H., Tsukihara, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

300

3P113 Structural analysis of the x-ray induced photoreduction of cytochrome c oxidase

Ido, W., Muramoto, K., Shinzawa-Itoh, K., Yamashita, E., Aoyama, H., Tsukihara, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

301

3P122 Examination of the solution structures between native and E. coli -expressed lightharvesting membrane proteins

Otomo, S., Mochizuki, Y., Shimada, Y., Suzuki, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

302

3P123 Stabilization of bovine heart NADH-ubiquinone oxidoreductase(complex I) with phospholipids

Sugiyama, H., Nakatubo, R., Terada, T., Itou-Shinzawa, K., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

303

3P124 Structural analysis of membrane protein by solid-state correlation NMR between protein-^C and lipid-^2H, ^P

Harada, E., Todokoro, Y., Fujiwara, T., Akutsu, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

304

3P126 Thermalstability of bacteriorhodopsin reconstituted in DMPC liposome

Negishi, R., Sonoyama, M., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

305

3P127 Signal assignments and secondary structural analysis of uniformly labeled H^+-ATP synthase subunit c by high-resolution solid-state NMR

Kobayashi, M., Matsuki, Y., Yumen, I., Fujiwara, T., Akutsu, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

306

3P128 Single-pair FRET analysis for conformation changes of ABC transporters

Toei, M., Yoshida, M., Yokoyama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

307

3P129 Crystal structure of xenon enclosed bacteriorhodopsin

Hasegawa, D., Kasahara, T., Murakami, M., Kouyama, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

308

3P131 The three-dimensional structure of FtsH oligomer from E. coli by cryonegative electron-microscopy

Saikawa, N., Suzuki, H., Akiyama, Y., Ito, K., Kimura, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

309

3P132 Theoretical study of solvent effect on electronic structure of biomolecules in solution by the integral equation theory

Yoshida, N., Hirata, F.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

310

3P134 Ab initio fragment MO calculations of whole protein-ligand complexes: FK506 binding protein with high affinity ligands

Nakanishi, I., Fedorov, Dmitri, Kitaura, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 211 KB

2005

311

3P135 Magnetic tests and ferromagnetic resonance on Daphnia resting eggs

Sakata, M., Kawasaki, T., Shibue, T., Tsuruta, S., Yoshimura, H., Namiki, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 211 KB

2005

312

3P138 Gluconate-gluconate interaction and its strong effect on heat-induced myosin gel

Ooi, A., Tamura, Y., Okagaki, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

313

3P143 Analysis of Hydrophobic Effects by Molecular Dynamics Simulation

Shimbo, Y., Seki, Y., Matsumoto, H., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

314

3P144 Polarization Characteristics of Water Molecules in Various Clusters

Ohta, S., Matsumoto, H., Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

315

2SE01 Regulatory mechanisms of alternative splicing in metazoans

Hagiwara, M., Kuroyanagi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

316

2SE02 Roles of alternative splicing for diversification of protein structure and function

Shionyu, M., Yura, K, Hijikata, A., Nakahara, T., Shinoda, K., Yamaguchi, A., Takahashi, K., Go, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

317

2SE03 Molecular mechanism of muscle-specific pre-mRNA splicing

Sakashita, E., Endo, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

318

3P145 Evaluation of electrostatic interactions using non-periodic boundary condition by molecular dynamics simulation

Uda, T., Seki, Y., Yamada, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

319

3P146 Structural analysis of alcohol-water mixture by molecular dynamics simulation

Nagai, H., Tomizawa, T., Kobayashi, H., Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

320

3P148 Evaluation of the potential models for water molecule contained in protein

Aramaki, T., Okimoto, N., Yasuoka, K., Kawamura, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

321

3P149 Effects of halogen ions and ionic strength on the formation of hyper-mobile water around poly x.x-ionene

Miura, Y., Miyazaki, T., Suzuki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

322

3P151 Dielectric measurements of aqueous solutions of chondroitin sulfate A and viscoelastic properties of its gels

Saito, S., Miyazaki, T., Butler, James, Suzuki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

323

3P152 Effects of chaotropic ions on the fluorescence spectrum of water

Mogami, G., Miyazaki, T., Suzuki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

324

3P160 Molecular dynamic simulations of isolated beta-subunit of F_1-ATP synthase

Nakao, M., Fuchigami, S., Kidera, A., Ikeguchi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

325

3P163 New Reaction Intermediate of F_1-ATPase found at low temperature

Watanabe, R., Shimabukuro, K., Yoshida, M., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

326

3P167 Temperature Dependence of the Rotation of F_1-ATPase (3)

Furuike, S., Adachi, K., Sakaki, N., Itoh, H., Shimo-Kon, R., Yoshida, M., Kinoshita, K. Jr.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

327

3P168 A unified theory of the workings of motor proteins

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

328

3P170 Analysis of an idealized model for a rotary molecular motor

Amari, S., Sasaki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

329

3P173 A Region of the Essential Light Chain involved in the Regulation of Conformational Transition/Filament Assembly of Smooth Muscle Myosin

Katoh, T., Takeucjhi, M., Ishida, A., Taniguchi, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

330

3P175 Singlemolecular analysis of the binding state of one-headed myosin V and actin

Oguchi, Y., Olivares, Adrian O, Cruz, Enrique M De La, Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

331

3P178 Consideration of information processing of a molecular motor

Tanaka, H., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 240 KB

2005

332

3P179 Effect of stochastic step size on the actin-myosin sliding motion

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 240 KB

2005

333

3P180 Calculation of potential of mean force between actin molecules making contact through excluded volume effect

Shimada, Y., Irisa, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 240 KB

2005

334

3P182 The role of dynactin p150 revealed by microtubule binding

Kobayashi, T., Shiroguchi, K., Edamatsu, M., Toyoshima, Y.Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

335

3P183 Direct observation of motility of the minus-end directed motor protein Pkl1

Iwasaki, S., Furuta, K., Takakura, K., Toyoshima, YY.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

336

3P184 Incorporation of photochromic molecule into the microtubule binding site of Kinesin

Nakajima, Y., Yamada, M., Kondo, K., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

337

2SE04 Isolation and functional analysis of a novel subtype of Rpn10, an ubiquitinbinding subunit of the 26S proteasome

Kawahara, H., Minami, R., Shimada, M., Yokosawa, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

338

3SB51 Introdction:Flow of excitation energy and electrons in protein. Past and future: A view from experimental research

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

339

3P185 Interaction of a new ATP analogue with kinesin and myosin

Umeki, N., Umezu, N., Mitsui, T., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

340

3P188 2-dimensional measurement of Kinesin move with quantum dots

Sato, T., Watanabe, T., Higuchi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

341

3P189 Regular 8-nm steps, 7pN force and cooperative steps generated by single molecules of cytoplasmic dynein

Toba, S., Watanabe, T., Yamaguchi, L., Toyoshima, Y.Y., Higuchi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 253 KB

2005

342

3P191 Stable nucleotide binding to axonemal dynein in the regulation of microtubule sliding of flagella

Inoue, Y., Shingyoji, C.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 253 KB

2005

343

3P193 Structural changes responsible for the dynein power stroke

Shima, T., Imamura, K., Kon, T., Ohkura, R., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

344

3P198 Dynamic residue paring for the universal joint mechanism of the flagellar hook

Fadel, Samatey, Matsunami, H., Imada, K., Nagashima, S., Kitao, A., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

345

3P199 Study of the periplasmic fragment of MotB, a stator component of the flagellar motor from Salmonella

Kojima, S., Furukawa, Y., Minamino, T., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

346

3P201 Role of the charged residues in the rotor and stator of a Na^+-coupling flagellar motor in Escherichia coli

Yakushi, Toshiharu, Yane, Jung-Hoon, Fukuoka, Hajime, Homma, Michio, Blair, David

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

347

3P202 Improvement in motion efficiency of spirochete in viscous environment

Nakamura, S., Adachi, Y., Magariyama, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

348

3P207 Distributions of actin filament binding proteins are unrelated to the retrograde flow in filopodia and lamellipodia

Nakagawa, H., Terasaki, A.G., Ohashi, K., Miyamoto, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 224 KB

2005

349

3P208 Molecular mechanism of lamellipodium dynamics

Kohmoto, S., Miyata, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 224 KB

2005

350

3P210 Structural Transition of Actin Filament in a Cell-Sized Water Droplet

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

351

3P211 Development of cell type identifying and sorting by using transporter-mediated labeling regent

Anzai, Y., Hattori, A., Okano, K., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

352

3P214 Relationship between thermosensitivity and membrane fluidity in Paramecium

Sasaki, T., Toyoda, T., Nakaoka, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

353

3P218 Critical Role of osteopontin in osteoclast differentiation and activation

Suzuki, K., Sodek, Jaro, Yamada, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

354

3P219 Preparation of the mammalian Exocyst complex for the three-dimensional structure determination

Fukai, S., Shirakawa, R., Horiuchi, H., Mio, K., Maruyama, Y., Sato, C., Nureki, O.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

355

3P222 Do mitochondria change their activity by crowding?

Ohta, Y., Yoshioka, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

356

3P223 Measurements of density change in a single mitochondrion

Ohta, Y., Morikawa, D.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

357

3SB52 Spectroscopy of individual Light-Harvesting antenna complexes from photosynthetic bacteria

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

358

3SB53 Where does the Q-M coherence break?: Usefulness of the theory for electron or excitation transfer via a midway molecule in biosystems

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

359

3SB55 Electron transfer reactions in biomolecules

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

360

Application of newly developed microthermometer for the detection of heat generation developed by HeLa cell

Suzuki, M., Zeeb, Vadim, Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

361

NADPH oxidase-induced differentiation in B-cells elucidated with cell cycle analysis

Ando, Y., Suzuki, T., Hiraoka, W.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

362

Detecting the emergence of separate entities within a mother cell in Escherichia coli

Umehara, S., Hattori, A., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

363

New aspects of interaction between ceramide and glycerophospholipids

Sato, SB, Kurumada, S., Yano, Y., Matsuzaki, K., Kobayashi, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

364

Micropatterned composite membranes of polymerized and fluid lipid bilayers : Incorporation of fluid bilayers by the vesicle fusion process

Okazaki, T., Morigaki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

365

Substrate supported phospholipid membranes studied by SPR and surface plasmon fluorescence spectroscopy (SPFS)

Morigaki, K., Tawa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

366

Cyclic lipid-two-tailed lipid communication

Shibakami, M., Goto, R., Miyoshi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

367

Effect of alcohol on aggregated structure of gangliosides

Hirai, H., Hirai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

368

3P248 Formation of Cubic Phases from Large Unilamellar Vesicles of DOPG/MO Membranes Induced by Low Concentrations of Ca^

Awad, Tarek, Okamoto, Y., Masum, Shah, Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

369

Effect of Antimicrobial Peptide, Magainin 2, 0n Membrane Permeability of Giant Unilamellar Vesicles

Tamba, Y., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 281 KB

2005

370

3P251 Study on interactions of somatostatin with lipid bilayers by solid state NMR

Okada, Y., Nishimura, K., Sasaki, J., Kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 281 KB

2005

371

3P253 Successive Memory Recalls by Slime Mold Neurocomputer

Aono, M., Hara, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

372

3P256 Co-application of NMDA and DHPG results in an induction of LTP

Nakao, Y., Yamamoto, K., Kometani, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

373

3P257 Contribution of arachidonic acid and its metabolites to DHPG induced long-term depression in the hippocampus

Fukumoto, S., Shiroma, S., Kometani, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 276 KB

2005

374

3P258 Development of small multi-electrodes-array system and electrophysiological measurements of artificially constructed neural network

Suzuki, I., Hattori, A., Sugio, Y., Jimbo, Y., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 276 KB

2005

375

3P259 Stepwise controlling derection of neurite outgrowth for single cell and electropysiological measurement

Kitamura, T., Suzuki, I., Sugio, Y., Shibata, K., Kaneko, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 276 KB

2005

376

3P260 Localization of Activated Ca^/calmodulin-Dependent Protein kinase II within a spine

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 276 KB

2005

377

3P262 Analysis of gene expression associated with longterm memory in Lymnaea stagnalis using a cDNA microarray

Asami, S., Ito, E.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 253 KB

2005

378

3SB56 Marcus theory is not almighty for the electron transfer in biological systems

Kakitani, T., Nishioka, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 227 KB

2005

379

3SC51 Introduction : Fluctuation, Phenotypic Plastisicty and Evolution

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 227 KB

2005

380

3P268 Activin A modulates dendritic spines in rat hippocampus

Mitsuhashi, K., Mukai, H., Hojo, Y., Asashima, M., Fukui, A., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

381

3P269 Analysis of Estrogen Receptor alpha localization in rat hippocampus by centrifugal preparation and immunological approach

Murakami, G., Kominami, S., Mukai, H., Kimoto, T., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

382

3P271 Cryogenic ENDOR study of water molecule nearby SO-state Mn cluster in PhotosystemII

Yamada, H., Mino, H., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

383

3P273 Electronic structure of the cation radical of P680 in photosystem II

Kitajima, Y., Mizuide, H., Tomo, T., Sugiura, M., Noguchi, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

384

3P274 Infrared measurements of the redox cofactors in photosystem II using the ATR method

Okubo, T., Suzuki, H., Sugiura, M., Noguchi, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

385

3P277 A theoretical study of the primary charge-separation process in the photosynthetic reaction center

Yamasaki, H., Takano, Y., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

386

3P278 Sulfur oxidation pathways linked with photosynthetic electron transfer pathway in the green sulfur bacterium Chlorobium tepidum

Azai, C., Tsukatani, Y., Itoh, S., Oh-oka, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

387

3P282 The variety of pigment complex in oxygenic photosynthetic cyanobacteria, Acaryochloris sp.

Uchida, S., Nagai, H., Mino, H., Kobayashi, M., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

388

3P283 Fluorescence properties of a cyanobacterium Acaryochloris sp. strain Awaji

Akiomto, S., Murakami, A., Yokono, M., Koyama, K., Tsuchiya, T., Miyashita, H., Yamazaki, I., Mimuro, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

389

3P284 Function of photosynthetic light-harvesting membrane protein LH2 and Reaction center complex inside silica nano-pores

Oda, I., Ishizaka, S., Tsutsui, Y., Shibata, Y., Dewa, M., Kajino, T., Fukushima, Y., Iwai, S., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

390

3P285 Crystal structure of WSCP, a putative Chltransporter in green plants, reveals a mechanism protecting chlorophyll from its photooxidation

Horigome, D., Satoh, H., Itoh, N., Mitsuaga, K., Oonishi, I., Nakagawa, A., Uchida, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

391

3P287 Excitation energy transfer in the antenna system with divinyl-chlorophylls in the vinyl reductase-depressing Arabidopsis

Yokono, M., Ohamae, M., Akimoto, S., Yamazaki, I., Nagata, N., Tanaka, A., Mimuro, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

392

3P289 Theoretical study of decomposition process of firefly dioxetanone to generate electronic excited oxyluciferin

Sakai, H., Wada, N., Kusunoki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

393

3P290 Anomalous Energy Gyap Dependence of the Rate of Electron Transfer in Protein Environment Caused by Inelastic Tunneling Mechanism

Nishioka, H., Kimura, A., Yamato, T., Kawatsu, T., Kakitani, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

394

3P291 DNA-dependent protein kinase mediates the higher-order transition of DNA conformation

Takahagi, M., Yoshikawa, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

395

3P295 Evolution through a neutral path in a promoter evolution experiment based on the isothermal nucleic acid amplification

Ma, X., Nagayasu, H., Ageno, Y., Kunii, T., Husimi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

396

3P297 Simulating Evolution of Phenotype-Genotype Mapping in Morphogenesis

Fujimoto, K., Ishihara, S., Kaneko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 296 KB

2005

397

3P300 Extracting properties of fitness landscape from in vitro evolution : application to in vitro evolution for infactivity of fd phage

Aita, T., Hayashi, Y., Toyota, H., Husimi, Y., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 296 KB

2005

398

3P301 Evolutionary Process for Creation of Flexibility of Bio-organisms

Ito, Y., Toyota, H., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

399

3P303 Exploring to the network configuration of essential metabolic maps

Azuma, Y., ota, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

400

3SC54 Cell signaling and fluctuations

Ueda, M., Shibata, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 186 KB

2005

401

3P306 Phase-locking of brain wave to flicker stimuli

Nishifuji, S., Ohkado, H., Tanaka, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

402

3P308 Rotating spiral waves in the organizing Physarum plasmodium

Takagi, S., Ueda, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

403

3P312 Stochastic Fluctuation and Relaxation in a Genetic Feedback Loop

Okabe, Y., Yagi, Y., Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

404

3P314 A dynamical system with rugged energy landscape

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

405

3P316 Force mechanical detection of act in filament using antibodyimmobilized nanoneedle

Nakamura, C., Sato, T., Obataya, I., Nakamura, N., Miyake, J.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

406

3P317 Analyzing motions of microtubules gliding on kinesin motors in micro-fabricated patterns

Nitta, T., Hirano, M., Hess, Henry

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

407

3P318 Artificial cells equipped with cellular connection mechanism

Nomura, S.-i.M., Kaneda, M., Kondoh, S., Nakahama, K., Morita, I., Akiyoshi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

408

3P319 Novel electroporation method having no dependence on cell size or shape

Kurosawa, O., Oana, H., Wake, Y., Matsuoka, S., Noma, A., Kotera, H., Sashizu, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

409

3P320 Investigation of optimal design of microfluidles devices for alignment of single cells using microfabrication technique

Hattori, A., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

410

3P321 High reproducible method for multiple array of artificial planar lipid bilayers

Suzuki, H., Tabata, K., Noji, H., Takeuchi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

411

3P322 Nano-characterization and nano-fabrication of a nafion film in liquids

Umemura, K., Wang, Tons, Hara, M., Kuroda, R., Uchida, O., Nagai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

412

3P326 Effect of the N-terminus of E. coli Dps on its function

Mishima, Y., Yamane, M., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

413

3P330 Fabrication of zinc oxide nano-particles using ferritin and H202

Okuda, M., Nishio, K., Matsukawa, N., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

414

3P331 The effect of N-terminal residuse of L-chain apoferritin on the biomineralization

Yoshizawa, K., Iwahori, K., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

415

3P332 The synthesis of semiconductor nanoparticles in the Listeria ferritin cavity

Enomoto, T., Iwahori, K., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

416

3P333 Perfect two-dimensional array of iron nano-articles using protein ferritin

Kondoh, T., Kobayashi, Y., Okuda, M., Suzuki, T., Fukano, H., Yoshimura, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

417

3P334 Poly(ethylene glycol) grafting through poly(acrylic acid) for protein resistant glass surface

Wazawa, T., Katsura, Y., Aoyama, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

418

3P336 Fabrication of semiconductor nanoparticles in the apoferritin cavity

Iwahori, K., Yoshizawa, K., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

419

3P337 Gold nano-particles work as a carrier in immunological response

Ishii, N., Fitrilawati, F., Manna, A., Akiyama, H., Tamada, Y., Tamada, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

420

3P339 Immobilization of Au nano-particles on substrate by cysteine mutant TRAP

Fujiwara, I., Yoshii, S., Nishio, K., Heddle, Jonathan, Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

421

3P340 Properties of Polyhedra

Hamada, N., Nakamura, R., Ichida, H., Kanematsu, Y., Tokunaga, F., Mori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

422

3P341 Crystallization of PYP for neutron crystallography

Yamaguchi, S., Kamikubo, H., Shimizu, N., Yamazaki, Y., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 282 KB

2005

423

3P342 N-terminal segmental dynamics of Cystatin as a regulatory factor for its crystallization

Takahashi, D., Kouzuma, Y., Nishimoto, E., Yamashita, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 282 KB

2005

424

3P345 Change of cuticle ultrarstructure caused by hair damage

Kawasoe, T., Fujiyama, T., Shimizu, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 282 KB

2005

425

3SD55 Broadband dielectric study on dynamics of water/biomolecules

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

426

3SE51 Molecular mechanisms of self-assembly and switching of the bacterial flagellum

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

427

3P345 Mechanism of ultrasound-indused inactivation of tyrosinase

Takahashi, T., Sato, M., Suzuki, T., Terakawa, K., Hiraoka, W.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

428

3P346 Anti-static phase-plate for phase TEM

Okawara, H., Nagayama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

429

3P347 Observation of the Carbon Nanotube by Fluorescence Microscope and Scanning Electron Microscope

Shimizu, A., Nagai, M., Arai, F., Fukuda, T., Ishijima, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

430

3P348 Single-cell analysis of E.coli's polarity

Ayano, S., Inoue, I., Shiomi, D., Kawagishi, I., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

431

3P352 Improvement of RTRAC (autonomous molecular computer) for scientific and diagnostic application

Kiga, D., Takinoue, M., Shohda, K., Kageyama, Y., Toyoda, T., Sugawara, T., Suyama, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 209 KB

2005

432

10.2142/biophys.45.s296_1

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 119 KB

2005

433

10.2142/biophys.45.s296_2

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 119 KB

2005

434

10.2142/biophys.45.s297_1

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 211 KB

2005

435

10.2142/biophys.45.s297_2

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 211 KB

2005

436

10.2142/biophys.45.s298

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 720 KB

2005

437

3SE54 Role of water in the proton pumping cycle of bacteriorodopsin

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

438

1SA56 Novel Bioimaging Opened up with Phase Contrast Electron Microscopy("Japan-Australia Joint Symposium on Biophysics" (English Session))

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 227 KB

english, 2005

439

New generation system Biacore T100(2LS-B)

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 95 KB

2005

440

10.2142/biophys.45.s301

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 142 KB

2005

441

10.2142/biophys.45.s304_1

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 138 KB

2005

442

10.2142/biophys.45.s304_2

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 138 KB

2005

443

3SF52 Instrumentation of Nano-Force Scanning Probe Microscopy and the Application to Cell Biology

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

444

3SF55 Single molecule approach to the function of biomolecules

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 198 KB

2005

445

1P002 Cavity dynamics of protein by MD simulation

Nakai, S., Matsumura, N., Toyokawa, J., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 248 KB

english, 2005

446

1P005 Conformational change of calmodulin studied by X-ray solution scattering and molecular dynamics simulation

Hoshino, Y., Sugimoto, Y., Wakabayashi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

447

1P006 Molecular dynamics study of conformational changes in human serum albumin by binding of fatty acids

Fujiwara, S., Amisaki, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

448

1P007 Free-energy landscape of a 10-residue peptide obtained from multicanomical molecular dynamics simulation and its calibration method

Kamiya, N., Yonezawa, Y., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

449

1P011 Analysis of Salmonella Flagellar Filaments with Raman Optical Activity Spectra

Uchiyama, T., Sonoyama, M., Hamada, Y., Oosawa, K.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 238 KB

english, 2005

450

1P014 Normal mode analyses of hetero and homo dimeric proteins

Endo, S., Wako, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

451

1P016 X-ray crystal structure analysis of type II antifreeze protein from Longsnout poacher

Nishimiya, Y., Sugimoto, H., Sato, R., Noro, N., Kondo, H., Takamichi, M., Miura, A., Tsuda, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

452

1P017 Structural analysis of mutants of cyanobacterial circadian clock protein KaiB

Iwase, R., Imada, K., Hayashi, F., Uzumaki, T., Namba, K., Ishiura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 292 KB

2005

453

1P023 Structural change in UDP-N-acetylglucosamine pyrophosphorylase from Candida albicans

Maruyama, D., Nishitani, Y., Nonaka, T., Kita, A., Fikami, T.A., Sogabe, S., Mio, T., Yamada-Okabe, H., Yamada-Okabe, T., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

454

1P027 Phosphorylation-induced conformational change of NADPH oxidase subunitp47^ : A site-directed spin labeling (SDSL) study

Suzuki, T., Inanami, O., Kuwabara, M., Inagaki, F., Hiraoka, W.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 294 KB

2005

455

1P029 Analyses of interaction of chaperonin with prefoldin and delivery of substrate protein from prefoldin to chaperonin

Murase, Y., Zako, T., Iizuka, R., Ide, N., Yoshida, T., Maeda, M., Yohda, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

456

1P030 Conformation change of hyperthermophilic archaeal group II chaperonin depending upon bound nucleotide

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

457

1P032 Temperature and pressure effects on the structure and functions of protein disulfide isomerase

Ado, K., Takeda, N., Kikuchi, M., Taniguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

458

1SB02 Single molecule imaging and quantification of interactions with molecular complexes in cells

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

459

1SB03 Signaling for axonal outgrowth at the growth cone

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

460

1P034 Spectroscopic and Electrochemical Studies of Pseudoazurin M16X Variants

Obara, Y., Abdelhamid, Rehab F, Brown, Doreen E, Juda, Gregory A, Shepard, Erick M, Dooley, David M, Hori, H., Kohzuma, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

461

1P036 Implication for reaction mechanism of bacterial NAD dependent isocitrate dehydrogenase based on crystal structure and quantum chemistry

Imada, K., Tamura, T., Takenaka, R., Kobayashi, I., Inagaki, K., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

462

1P041 Dynamical observations of antibody fluctuations by binding antigens using X-ray single molecule detection system

Sagawa, T., Azuma, T., Sasaki, Y.C.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

463

1P044 Unique properties of arginine kinase from Sabellastarte indica

Uda, K., Matsumoto, A., Shima, M., Suzuki, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

464

1P046 Molecular mechanism of signal transduction of two-component system protein histidine kinase

Yamada, S., Akiyama, S., Sugimoto, H., Kumita, H., Ito, K., Fujisawa, T., Nakamura, H., Shiro, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

465

1P047 X-ray crystallographic analysis of a G protein mutant unable to couple to receptors

Morikawa, T., Muroya, A., Nakajima, Y., Tanaka, T., Wakamatsu, K., Sugio, S., Kohno, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

466

1P048 Functional analysis of IgM receptor on B cell

Ishikawa, K., Nakagawa, M., Shibuya, A., Azuma, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

467

1P054 Isolation and structure of fatty acid-bound α-lactalbumin prepared by the new heating method

Sato, T., Akimoto, K., Kamiya, M., Aizawa, T., Demura, M., Nitta, K., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

468

1P057 Expression and analysis of T4 baseplate protein gp48

Nakano, S., Kanamaru, S., Arisaka, F.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 286 KB

2005

469

1P062 Understanding protein conformational change by using Multiple GO Model

Okazaki, K., Koga, N., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

470

1P065 Collective motion of water field vicinity of the structural transition of biomolecule

Noda, S., Baba, A., Komatsuzaki, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

471

1P067 Identification of a client polypeptide interacting with the molecular chaperone HtpG

Nakamoto, H., Sato, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

472

1P071 Glycerol effects for the folding reaction of wild-type Staphylococcal nuclease

Baba, T., Kamikubo, H., Onitsuka, M., Yamazaki, Y., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

473

1P072 Effect of trehalose on the aggregation of β-amyloid

Watanabe, A., Okahata, Y., Furusawa, H., Hoshi, M., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

474

1P076 Amyloid-like Fibril Formation of Hen Lysozyme Single-Disulfide Variants

Shimoura, H., Kouno, R., Akasaka, K., Tachibana, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

475

1P077 Separate peptide regions are structured in fibrils of hen lysozyme disulfide-deficient variant

Tachibana, H., Kimura, M., Takizawa, T., Segawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

476

1P080 Site-specific conformational changes during unfolding/folding of BGTI

Matsumoto, S., Takahashi, D., Nishimoto, E., Kimura, M., Yamashita, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

477

1P082 The & phi- Value Analysis of Goat & alpha-Lactalbumin in the Absence of Calcium Ions

Tomoyori, K., Saeki, K., Maki, K., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

478

1P083 Structural stability of BPTl variants with highly simplified amino acid sequences

Yamada, M., Nakamura, S., Murakami, S., Kato, A., Kidokoro, S., Kuroda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

479

1P084 Structure formation and non-enzymatic deamidation of asparagine residus in canine milk lysozyme

Nonaka, Y., Akieda, D., Aizawa, T., Demura, M., Nitta, K., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

480

1P085 What interactions are important for the stability and specificity of conformations of a β-hairpin peptide

Yoda, T., Sugita, Y., Okamoto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

481

1P086 Structural stability of human tear lipocalin mutants

Tsukamoto, S., Yamasita, T., Sato, M., Tsuge, H., Fujiwara, K., Ikeguchi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

482

1P089 Developing a method for predicting the partial molecular volume of proteins in nonnative states

Seki, Y., Soda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

483

1P092 NMR resonance assignments and native-state hydrogen/deuterium exchange of a proline-free variant of staphylococcal nuclease

Maki, K., Endo, T., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

484

Is the denatured state of protein homogeneous in terms of the time scale of conformational interconversion

Yusa, M., Noda, Y., Tachibana, H., Segawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

485

1P095 Analyses of the folding reaction of the bovine β-lactoglobulin mutant using pulse-labeling H/D exchange

Yagi, M., Kameda, A., Sakurai, K., Nishimura, C., Goto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

486

1P096 Plasticity of protein substructures in evolution and roles of residues in folding

Nagao, C., Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

487

1P099 Protein grabs a ligand by extending anchor residues : Molecular Simulation for Ca^ binding to Calmodulin loop

Kobayashi, C., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 193 KB

english, 2005

488

1P100 Hydration structure change of protein upon ligand binding and domain closure

Kitao, A., Hayward, Steven

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 193 KB

english, 2005

489

1P101 Theoretical studies on model reaction pathways of prostaglandin D_2 synthase

Yamaguchi, N., Mori, S., Kohzuma, T., Takada, T., Sakata, F.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

490

1P109 Screening research for antifreeze proteins using cold-finger device

Miura, K., Hoshino, T., Tsuda, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

491

1P111 Characterization of a fish antifreeze protein from Sebastes steindachneri Hilgendorf

Yoshida, T., Tanaka, S., Nishimiya, Y., Miura, K., Miura, A., Tsuda, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

492

1SD01 Multiple funnels for protein dynamical function

Okazaki, K., Koga, N., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 218 KB

2005

493

1P114 Roles of N- and C- terminal domains of cyanobacterial circadian clock protein KaiC

Hayashi, F., Iwase, R., Uzumaki, T., Ishiura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

494

1P116 Exploration of the second ATP-binding site of GroEL

Takahashi, K., Kinoshita, K., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

495

1P119 kinetic study of reconstituted translation-replication system

Kita, H., Hosoda, K., Matsuura, T., Tsukada, K., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

496

1P120 Nucleotide-dependent Morphological Analysis of the RecA-DNA Filamentous Complex

Nishinaka, T., Doi, Y., Hashimoto, M., Shibata, T., Harada, Y., Kinosita, K., Noji, H., Yashima, E.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

497

1P123 Unexpected cleavage occurred in modified sigma7O subunit of active E. coli RNA polymerase

RajanBabu, Suganthan, Sato, Y., Yagi, S., Gyedu, Ampaabeng, Shimamoto, N.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 242 KB

english, 2005

498

1P126 Enzymology of Q beta replicase: Template RNA catches "Q beta replicase" in a trap

Hosoda, K., Kita, H., Matsuura, T., Tsukada, K., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

499

1P129 Compensatory Responses of Null-operator Gene Expression to Nutritional Changes in Escherichia coli

Suzuki, T., Kashiwagi, A., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 226 KB

2005

500

1P130 Biochemical properties of ordinary and dark myosins from carp skeletal muscle

Okagaki, T., takami, M., Hosokawa, K., Yano, M., Higashi-Fujime, S., Ooi, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 226 KB

2005

501

1P131 The phosphorylation state of twitchin does not affect on the Ca^-dependency of myosin Mg-ATPase activity of bivalve adductor muscle

Yamada, A., Yoshio, M., Oiwa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 226 KB

2005

502

1P133 Re-examinations of the Effects of BDM on the Actin-Myosin Interactions

Ohtsuki, M., Akiyama, N., Shimamoto, Y., Ishiwata, S., Kunioka, Y., Yamada, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

503

1P135 Self-regulation mechanism in an assembly of molecular motors-Regulatory role of myosin-ADP complex

Shimamoto, Y., Suzuki, M., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

504

1P142 Configuration of Myosin Crossbridges in Relaxed and Contracting Muscles Determined by Intensity Analysis of Myosin-based Reflections

Oshima, K., Takazawa, Y., Kobayashi, T., Thomas, C. Irving, Wakabayashi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

505

1P147 Structure Analysis of the Thin Filament Including Troponin by X-ray Diffraction

Matsuo, T., Ueno, Y., Takezawa, Y., Oshima, K., Wakabayashi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

506

1P148 Unusual movement of actin filament decorated with TRM-labeled-Troponin

Misawa, S., Mizuno, H., Honda, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

507

1P149 Regulatory roles of inhibitory region of Akazara scallop troponin-I

Tanaka, H., Ohtsuki, I., Ojima, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

508

1P151 Development and verification of the observation system for F_oF_1-ATP synthase rotation driven by membrane potential

Tabata, K., Iino, R., Ueno, H., Yamada-Kato, Y., Ide, T., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

509

1P152 Direct observation of stepping motion of the bacterial flagellar motor

Sowa, Y., Alexander, Rowe, Mark, Leake, Yakushi, T., Homma, M., Richard, Berry

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

510

1SD03 Protein function is driven by the intrinsic dynamics

Fuchigami, S., Ikeguchi, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 153 KB

english, 2005

511

1SD05 Vibrational dynamics and energy transport in proteins

Leitner, David M.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 153 KB

english, 2005

512

1P155 Identification of stator subunit in V-ATPase

Nakano, M., Tamakoshi, M., Imamura, H., Iino, R., Yoshida, M., Yokoyama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

513

1P159 Relation between heat-driven unidirectional movement of actins and their structures

Kawaguchi, T., Honda, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 247 KB

2005

514

1P161 Interaction between the tail and the AAA ring structure of cytoplasmic dynein

Numata, N., Kon, T., Ohkura, R., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

515

1P162 Kinetic analysis of the conformational changes of cytoplasmic dynein

Mogami, T., Kon, T., Ohkura, R., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

516

1P163 The binding and movement of single and two molecules of cytoplasmic truncated single-headed Dynein

Nguyen, HoaAnh, Kon, Tkkahide, Sutoh, Kazuo, Higuchi, Hideo

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

517

1P166 A mesurement of high-frequency nanometerscale vibration in flagella axonemes

Noda, N., Kamimura, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

518

1P169 Single molecule mechanics of recombinant Chara myosin motor domain

Kojima, H., Ito, K., Kimura, S., Yamamoto, K., Oiwa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

519

1P170 Plus- and minus-end directed kinesins cause tug of war movement of microtubules in vitro

Fujiwara, H., Tadakuma, H., Tomishige, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

520

1P171 Analysis of conformational changes on the functional sites of kinesin using fluorescent probe

Inada, Y., Umeki, N., Yamada, M., Nakajima, Y., Kondo, K., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

521

1P172 Effect of incorporated novel photochromic molecule into the Loop 11 of kinesin

Yamada, M., nakajima, Y., Kondo, K., Maeda, H., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

522

1P174 Observation of conformational intermediates of ATPase-deficient mutantkinesin using single molecule FRET

Mori, T., Nakajima, S., Tadakuma, H., Tomishige, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

523

1P178 Myosin Vl-actin interaction : Dependence on loading direction and nucleotide state of a motor

Mikhailenko, Sergey, Oguchi, Y., Olivares, Adrian, De La Cruz, Enrique, Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

524

1P179 Effective movement of the cooperative action of multi-headed molecular motors

Esaki, S., Ishii, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

525

1P181 Cooperative behavior of stochastic molecular motor

Nishikawa, M., Nishikawa, S., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

526

1P182 Translational and rotational steps of single myosinll molecules

Nishikawa, S., Nishikawa, M., Martin, Zullieer, Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

527

1P183 Structural analysis of the periplasmic flagella in Borrelia burgdorferi

Shibata, S., Aizawa, S., Charon, Nyles W.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

528

1P184 Classification of the flagellar polymorphic family by helical parameters

Fujii, M., Shibata, S., Aizawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

529

1P185 Characterization of two flagella systems of Azospirillum brasilense

Kanbe, M., Ebisawa, T., Aizawa, S.-I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

530

1P188 Analysis of interactions between FliI, flagellar specific ATPase, and flagellin-FliS complex

Furukawa, Y., Kazetani, K., Fadel, Samatey, Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

531

1P190 Oligomerization control of the flagellum-specific ATPase FliI in Salmonella

Minamino, T., Tahara, A., Kazetani, K., Furukawa, Y., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

532

1P191 Thermal denaturation analysis of temperature sensitive mutant of FIhAc, a subunit of the flagellar protein export apparatus of Salmonella

Shimada, M., Saijo-Hamano, Y., Furukawa, Y., Minamino, T., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

533

1SE01 A new frontier of archaenal retinal proteins

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

534

1SE03 Structure and function of chloride-pump, halorhodopsin

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

535

1SE04 Molecular mechanisms on color-tuning among archaeal rhodopsins and on the interaction between the photoreceptor and its transducer

Shimono, K., Sudo, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

536

1P195 Single molecule observation of interaction between EGF receptor and an adaptor protein Grb2 reconstituted in vitro

Morimatsu, M., Ohta, K., Yanagida, T., Sako, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 284 KB

2005

537

1P197 Single-molecular analysis of membrane-binding and enzymatic kinetics of PTEN

Matsuoka, S., Vazquez, Francisca, Ueda, M., Kuwayama, H., Devreotes, Peter, Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

538

1P198 Fluorescence labeling of the C-terminus of thrombopoietin with a puromycin analogue and its application to single-molecule imaging

Sakamoto, A., Watanabe, T., Yamagishi, M., Aizawa, Y., Kato, T., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

539

1P199 Improvement of single-molecule tracking by the development of new fluorescent silicon nanoparticles

Nishimura, H., Ritchie, Ken, Goto, M., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

540

1P202 Functional recombination of inner arm dynein with inner arml-lacking flagellar axonemes of Chlamydomonas mutants

Yamamoto, R., Yagi, T., Kamiya, R.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 265 KB

english, 2005

541

1P204 Effects of the projection domain of heatstable MAPs on kinesin motility

Fujii, M., Tanimura, A., Itoh, T.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 265 KB

english, 2005

542

1P205 Live imaging of Non-muscle myosin II in epithelial cells

Watanabe, T., Hosoya, H., Yonemura, S.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 282 KB

english, 2005

543

1P206 Molecular mechanism of mechanically induced detachment of integrin : involvement of Ca^ dependent phosphatase

Kiyoshima, D., Kawakami, K., Tatsumi, H., Hayakawa, K., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 282 KB

english, 2005

544

1P208 Structural analysis of native membrane cytoskeleton under cryoelectron microscope

Usukura, J., Makihara, M., Watanabe, T., Tanaka, N., Kaibuchi, K.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 282 KB

english, 2005

545

1P210 Regulation of neurofilament motility along microtubules by phosphorylated and dephosphorylated MAPs

Leterrier, Jean-Francois

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

546

1P212 Gradientproducing mechanism for graded radial extension of lamellipodia

Mizuno, T., Seki, T., Sun, Y., Yoshioka, K., Kawasaki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

547

1P216 Two-dimensional Infrared Spectroscopy and Molecular Dynamics of Liquid Formamide

Lima, M., Volkov, Victor, Foggi, P., Chelli, Riccardo, Righini, Roberto

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 216 KB

2005

548

1P218 Fission, growth and multiplication of lipid vesicles

Ueno, M., Sriwongsitanont, S., Chungcharoenwattana, S., Kashiwagi, H., Chaki, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 231 KB

2005

549

1P219 Structure-function analysis of mitochondrial fusion component, Mitofusin

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 231 KB

2005

550

1P220 Analysis of Mast Cell Degranulation using isolated SNAREs

Sakiyama, H., Nakanishi, M., Hirashima, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 231 KB

2005

551

1P221 Direct observation of membrane tubulation process of giant liposome induced by brain extract

Tanaka-Takiguchi, Y., Takiguchi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

552

1P225 Asymmetric nucleocytoplasmic transport revealed by a novel assay system using planner reconstituted nuclear envelope

Okonogi, A., Hiroshima, M., Shiina, N., Kose, S., Imamoto, N., Tokunaga, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

553

1SE05 Hydrogen-bonding networks of archaeal rhodopsins studied by FTIR spectroscopy

Furutani, Y., Shibata, M., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

554

1SE06 Crystal structures of acid blue and alkaline purple forms of bacteriorhodopsin

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

555

1SE07 Changes in local conformations and motions of rhodopsin induced by isomerization of retinal as studied by solid-state NMR

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

556

1P233 Expression analysis of signal-transducing proteins in the newt olfactory epithelium

Takashima, M., Okano, K., Sawada, K., Nakamura, T., Iwasa, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

557

1P234 Formation of orthogonal arrays and 2D crystals of AQP4

Tanimura, Y., Hiroaki, Y., Kamegawa, A., Nishikawa, K., Fujiyoshi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

558

1P235 Ligand screening of G protein-coupled receptors from a random peptide library

Sasaki, Y., Takeda, S., Yamada, K., Katakai, R.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

559

1P236 The mechanism of glutamate release from differentiated astrocytes

Shiga, H., Ito, E.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

560

1P238 Decrease of membrane fluidity at hippocampal pyramidal neuron due to aging

Sakakibara, M., Fukaya, T., Gondaira, T., Kashiyae, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

561

1P239 Analysis of the interaction between gymnemic acid and cyclodextrins

Izutani, Y., Kanaori, K., Oda, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

562

1P240 RNG105: A regulatory protein in synaptic stimulation-dependent local translation in neuronal dendrites

Shiina, N., Shinkura, K., Tokunaga, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

563

1P241 Synthesis of Brain Steroids in Rat Hippocampal Neurons

Hojo, Y., Nakajima, K., Nakanishi, H., Ishii, H., Kimoto, T., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 231 KB

2005

564

1P242 Modulation of neurotransmission at hippocampus by female hormone and stress hormone

Ooishi, Y., Hojo, Y., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 231 KB

2005

565

1P243 Acute morphological changes of hippocampal dendritic spine mediated by glucocorticoid receptor

Komatsuzaki, Y., Murakami, G., Kimoto, T., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 231 KB

2005

566

1P246 The pathway of brain neurosteroid synthesis in the rat hippocampus

Nakajima, K., Hojo, Y., Nakanishi, H., Kimoto, T., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

567

1P247 Association of neuronal mRNA transport complex and mitochondria

Shinkura, K., Shiina, N., Sakata-Sogawa, K., Tokunaga, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

568

1P248 Poisson and fractal processes in the locomotor activity in ant and mouse

Hanai, K., Satoji, Y., Yamaoka, R., Ozaki, M., Yokoyama, C., Nakatomi, Y., Fukui, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

569

1P250 Characteristics of motive force derived from a trajectory analysis of Amoeba proteus

Masaki, N., Tsuchiya, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 201 KB

2005

570

1P251 Neuroendocrine modulation of social cognition and economic decision-making

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 201 KB

2005

571

1P252 Spectral tuning in Photoactive Yellow Protein

Kawaguchi, K., Yamato, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 201 KB

2005

572

1P253 Molecular dynamics simulation of halorhodopsin with or without chloride ion

Hayashi, M., Shinoda, M., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

573

1P254 Multicanonical molecular dynamics simulation of the M intermediate of Photoactive Yellow Protein

Arai, S., Kamiya, J., Higo, J., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

574

1P256 QM/MM-RPA calculations of the absorption maxima of retinal Proteins

Sakurai, M., Hayashi, T., Saito, S., Houjou, H., Matsuura, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

575

1P260 Characterization of photoreaction of Rc-PYP and discussion of its interaction

Yamazaki, Y., Kamikubo, H., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

576

1P261 Role of chromophore loop in PYP photocycle

Sasayama, H., Harigai, M., Kamikubo, H., Yamazaki, Y., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

577

1P266 Measurement of anion binding dissociation constant of pharaonis halorhodopsin using isothermal titration calorimetry

Hayashi, S., Miyauchi, S., Hasegawa, C., Demura, M., Kamo, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

578

1P267 Structural study of transducer protein pHtrII by NMR

Hayashi, K., Sudo, Y., Mishima, M., Kamo, N., Kojima, C.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

579

1P268 The role of Arginine residue at chloride release channel of pharaonis halorhodopsin

Sato, M., Kikukawa, T., Kamo, N., Aizawa, T., Nitta, K., Demura, M., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

580

1P269 Control of absorption maximum and interaction between arginine and chloride ion in halorhodopsin

Kubo, M., Aizawa, T., Kamo, N., Nitta, K., Kawano, K., Demura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

581

1P270 Effects of transducer binding on pharaonis halorhodopsin

Hsegawa, C., Sudo, Y., Shimono, K., Miyauchi, S., Demura, M., Kamo, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

582

1P272 Structural analysis of Leptosphaeria rhodopsin, bacteriorhodopsin-like proton pump protein from a eucaryote

Sumii, M., Furutani, Y., Waschuk, Stephen, Brown, Leonid S., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

583

1SF01 NMR study on the interaction between chemokine receptors and chemokines

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 219 KB

2005

584

1SF03 Structural Biology of Phagocyte NADPH Oxidase

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 219 KB

2005

585

10.2142/biophys.45.app49

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 112 KB

2005

586

10.2142/biophys.45.cover13

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 84 KB

2005

587

1P275 Analysis of local structure of transmembrane of bacteriorhodopsin in the vicinity of Tyr residues as studied by solid state NMR

Kihara, N., Kawamura, I., Ohmine, M., Tuzi, S., Saito, H., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

588

1P280 The molecular bases of the differences of photoresponse property in rods and cones

Tachibanaki, S., Shimauchi-Matsukawa, Y., Arinobu, D., Takemoto, N., Kawamura, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

589

1P283 Construction and analyses of a non-interacting sites database for protein-protein interaction

Higurashi, M., Nakai, K., Kinoshita, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

590

1P291 A knowledge-based trial to gain information for atomic resolution structures of supra-molecules out of their images by electron microscopy

Yura, K., Ishida, H., Iwasaki, K., Kawabata, T., Tsutsumi, Y., Matsumoto, A., Mayanagi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

591

1P302 State Change of Micorbe in Fluctuating Enviroment

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 206 KB

2005

592

1P303 Hierarchical development and cell plastisity

Nakajima, A., Kaneko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 206 KB

2005

593

1P318 Feed-forward compensation for fast control of tip-surface distance on high-speed AFM

Uchihashi, T., Kodera, N., Yamashita, H., Ito, H., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

594

1P324 Analysis of conformational changes in the chaperonin GroEL using high-speed AFM

Taniguchi, M., Miyagi, A., Kodera, N., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

595

1P334 Development of Environmental Sensitive Photosensitizer for Biological Application

Yogo, T., Urano, Y., Mizushima, A., Inoue, T., Kikuchi, K., Hirose, K., Iino, M., Nagano, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 300 KB

2005

596

1P338 Mechanical responses of single living cell to elongation and contraction : Development of a measuring system using SPM

Tamura, K., Mizutani, T., Haga, H., Kawabata, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

597

2P005 Sequence-structure correlation of loops

Konagai, H., Ishida, T., Nakamura, S., Terada, T., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

598

2P011 Analysis on the relationships between local conformations and sequences in proteins using single site conformational codes

Tokue, Y., Ota, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

599

2P013 Crystal structure of hMTH1-8-oxo-dGTP complex and its active site

Nakamura, T., Toma, S., Ikemizu, S., Shirakawa, M., Nakabeppu, Y., Yamagata, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 251 KB

2005

600

2P018 Structural analysis of Oligopeptide-binding protein OppA homologue from Thermus thermophilus HB8

Morita, A., Sakai, N., Yao, M., Watanabe, N., Tanaka, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

601

1SB56 Structural mechanism of ATP hydrolysis and coupled conformational changes in kinesin-type motor KIF1A

Nitta, R., Okada, Y., Hirokawa, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

602

1SB57 How two-foot molecular motors may "walk"

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

603

2P041 Analysis of amyloid fibril formation in glucagon as studied by solid state NMR

Fujita, H., Nishimura, K., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 267 KB

english, 2005

604

2P047 Trimeric structure of human M-ficolin fibrinogen-like domain

Tanio, M., Kondo, S., Sugio, S., Kohno, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

605

2P048 Crystal structure of the NAD biosynthetic enzyme quinolinate synthase

Sakuraba, H., Yoneda, K., Ohshima, T., Tsuge, H., Katunuma, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

606

2P050 Structural fluctuation of a IDDM inducing MHC at the level of single molecule

Makita, J., Sagawa, T., Azuma, T., Kanagawa, O., Sasaki, Y., Kozono, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 281 KB

2005

607

2P053 The structure of repeat units composed of STPR from silkworm and comparison of the repeat units from silkworm and human

Saito, S., Yamaki, T., Kawaguti, K., Matumoto, D., Yamamoto, H., Kamijima, T., Aizawa, T., Takiya, S., Demura, M., Nitta, K., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

608

2P059 Understanding of the Origin of Transitions in Biological Molecules from the State Space Structures on Multi-dimensional Energy Landscapes

Li, Chun Biu, Komatsuzaki, T.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 251 KB

english, 2005

609

2P062 What is the determinant of the folding and non-folding trajectories in Trp-cage?

Ota, M., Ikeguchi, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

610

2P077 Formation process of amyloid aggregates of apomyoglobin under constant temperature

Koizumi, M., Hirai, M., Inoue, K., Miura, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

611

2P078 Amyloid fibrils formation of photoactive yellow protein

Sakamoto, A., Yamazaki, Y., Shirai, K., Kamikubo, H., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

612

1SC55 HPLC/mass spectrometry-based membrane biochemistry-Side-by-side analyses of raft lipids and proteins

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 221 KB

2005

613

2P087 Dynamic observation of protein folding on AFM

Ishii, T., K., Atsuto, Murayama, Y., Sano, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

614

2P091 Protein folding studied by a high-pressure temperature-jump apparatus

Kamagata, K., Okamoto, K., Nagasawa, M., Matsumoto, M., Nakagawa, T., Kusajima, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

615

2P100 Photoinduced electron transfer in glucose oxidase : picosecond time-resolved ultraviolet resonance Raman study

Fujiwara, A., Mizutani, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

616

2P102 Direct measurement of spoecific interaction between Transcription Factor Protein and DNA

Nakata, Y., Shimizu, Y., Suzuki, T., Fujita, M., Kurihara, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

617

2P109 Analysis of complex formation among FEN1, PCNA and 5-prime flap DNA by Fluorescence Cross Correlation Spectroscopy

Sakata, H., Uchida, M., Kinjo, M., Morioka, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

618

2P129 Step-like elongation of a single chromosome on mechanical stretching

Ikeda, K., Hoshi, O., Ushiki, T., Haga, H., Kawabata, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

619

2P132 Dielectric Spectroscopy of Short Oligo DNA : DNA Concentration, Length and Sa lt Concentration Dependence of the Dielectric Increment

Katsumoto, Y., Omori, S., Asami, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

620

2P144 Molecular Mechanism of Cooperativity in Protein-DNA Recognition

Sarai, A., Kono, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

621

2P158 Analysis of Troponinsubunits arrangement within the thin filament with neutron fiber diffraction

Fujiwara, S., Matsumoto, F., Takahashi, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

622

2P162 Imaging of single actin molecules within a filament

Taguchi, Y., H., Hajime

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

623

2P163 Alteration of thin filament length regulation in immobilized soleus muscle of the rat

Ohmori, S., Utaka, J., Kurihara, S., Ishiwata, S., Fukuda, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

624

2P176 Application of external force with traveling wave electric field to F_1 motor

Watanabe-Nakayama, T., Muneyuki, E., Sugiyama, S., Kudo, S., Yoshida, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

625

2P178 Rotation mechanism of V_1 is distinct from that of F_1

Imamura, H., Takeda, M., Funamoto, S., Yoshida, M., Yokoyama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

626

2P180 Rotation of F_1-ATPase with γ subunit truncations

Hossain, Mohammad Delawar, Furuike, S., Maki, Y., Adachi, K., Ali, Md. Yusuf, Huq, Mominul, Yoshida, M., Kinosita, K. Jr.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

627

2P182 The mechanism of regulating the interaction between dynein stalk and microtubules

Hirota, K., Zako, T., Edamatsu, M., Funatsu, T., Toyoshima, Y.Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

628

2P184 Two-dimensional averaged images of the dynactin complex revealed by single particle analysis

Imai, H., Narita, A., Schroer, Trina A., Maeda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

629

2P186 Nucleotide dependent microtubule affinity of cytoplasmic dynein

Imamura, K., Kon, T., Ohkura, R., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

630

2P190 A novel structural intermediate of S1 during re-association with actin : time course analyses using prodan fluorescence

Uyeda, T.Q.P., Umeki, N., Maruta, S., Katayama, E.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

631

2P192 Calmodulin light chains regulate the processivity of higher plant myosin XI

Tominaga, M., Kojima, H., Yokota, E., Nakamori, R., Asano, Y., Kuradomi, T., Shinmen, T., Oiwa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

632

2P198 Single molecule analysis of processive movement of heterodimeric kinesin that comprise two motor heads with different velocities

Onishi, S., Tadakuma, H., Tomishige, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

633

1SE54 Detection of weak interaction of WW domains and ligands and the structural analysis of the WW domain - ligand complex

Kato, Y., Nagata, K., Tanokura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

634

2P208 Rotation rate-torque characteristics of polor flagella of Vibrio alginolyticus

Nishitoba, M., Magariyama, Y., Sugiyama, S., Kudo, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

635

2P211 Single-molecule kinetics of Ras/Raf1 interactions in living cells

Hibino, K., Yanagida, T., Sako, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

636

2P213 Single fluorescent molecule rracking of MARCKS on the cytoplasmic surface of the cell membrane

Iwasawa, K., Kajikawa, E., Hirano, H., Koyama-Honda, I., Kasai, R., Ken, Ritchie, Miwa, Y., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

637

2P214 Mechanical properties of a single microtubule measured by optical tweezers

Ozaki, Y., Shimozawa, T., oguchi, Y., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

638

2P222 A new image analysis to determine three dimensional structures of ends of actin filaments from cryo electron micrographs

Narita, A., Yamashita, A., Maeda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

639

2P233 Involvement of PI3K-dependent signaling pathway in galvanotaxis of amoebae

Sato, M.J., Ueda, M., Takagi, H., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

640

2SA03 Single molecule measurement of an actomyosin motor

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 198 KB

2005

641

2P251 Critical heat capacity in the anomalous swelling region of diacylphosphatidylcholines

Yao, H., Ema, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 239 KB

2005

642

2P252 Effect of ionic strength on highly crystalline phase formation in DMPG dispersion

Kinoshita, M., Kato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 239 KB

2005

643

2P258 Simultaneous electrical and optical observation of single ryanodine binding events to a single ryanodine receptor

Ichikawa, T., Yanagida, T., Ide, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 287 KB

2005

644

2P260 Theoretical Study of Ion Translocation in Carbon Nanotube as an Analogy of Ion Channel

Sumikama, T., Saito, S., Ohmine, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 287 KB

2005

645

2P273 Analysis of the interaction and dynamics between pharaonis phoborhodopsin and its cognate transducer by Solid-State NMR

Kawamura, I., Ikeda, Y., Yoshida, H., Saito, H., Kamo, N., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

646

2P27 Signal assignments and Analysis of local motion in isotopically-labeled bacteriorhodopsin as studied by ^N relaxation time measurements

Ohmine, M., Kawamura, I., Nishimura, K., Tuzi, S., Saito, H., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

647

2P278 Room Temperature FTIR difference spectra of L and M intermediates of bacteriorhodopsin at 5000-800 cm^

Lorenz-Fonfria, Victor, Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

648

2P280 Strongly hydrogen-bonded water molecule present in the rhodopsins with proton-pump activity

Kandori, H., Furutani, Y., Shibata, M., Sumii, M., Mizuide, N., Muneda, N., Ikeda, D., Kawanabe, A., Kamo, N., Demura, M., Ihara, K., Jung, K.-H., Brown, L.S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

649

2SB02 CO Sensory Protein Containing PAS Domains

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

650

2P283 Effect of chloride on the photobleaching process of Group L visual pigment

Morizumi, T., Imai, H., Onishi, A., Shichida, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

651

2P290 Photoreaction of LKP2-LOV and its C82A-mutant

Zikihara, K., Yasuhara, M., Matsuoka, D., Yoshihara, S., Todo, T., Kiyosue, T., Tokutomi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

652

2P296 Searching for chromophore ad spectral analysis of a phytochromelike PixJ1 which shows blue/green reversible photoconversion

Yoshihara, S., Matsuoka, D., Zikihara, K., Kohchi, T., Tokutomi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

653

2P297 Photoconversion mechanisms of PixD protein studied by site-directed mutagenesis and time-resolved spectroscopy

Fukushima, Y., Okajima, K., Shibata, Y., Ikeuchi, M., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

654

2P299 Resonance Raman Study on the Active Site of (6-4) Photolyase : Electron Density Localization in FAD and Strong H-bonding Environment

Li,, Uchida, T., Todo, T., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

655

2P310 Analysis of physicochemical properties of epitope candidate segments of allergen proteins

Asakawa, N., Teshima, R., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

656

2P318 AFM analysis of interaction forces between bio-molecules using ligand-functionalized polymers

Sekiguchi, H., Arakawa, H., Sugiyama, S., Ikai, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

657

2SB05 PAS domain of bacterial photo-sensor. photoactive yellow protein

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

658

2SB06 Molecular dynamics simulation of photoreceptors possessing PAS domains

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

659

2P321 Characteristics of single hydrogen bonds of DNA base pairs detected by intermolecular force microscopy

Hiroshima, M., Tokunaga, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 286 KB

2005

660

2P322 Evaluation of a polyurea thin film by vapor deposition polymerization as the surface for uniform probe immobilization

Kira, A., Kim, H., Okano, K., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 286 KB

2005

661

2P324 Method and its evaluation of SH-ssDNA modification onto gold nanoparticle

Kohno, H., Kira, A., Kim, H., Okano, K., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 286 KB

2005

662

2P327 Analysis method for temporal fluctuation of gene expression activity by deconvolution of amount of the product

Ichinose, J., Kashiwagi, A., Yomo, T., Kaneko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 290 KB

2005

663

2P329 Development of complementary approach for circadian rhythm of suprachiasmatic nucleus

Sugio, Y., Terazono, H., Suzuki, I., Kaneko, T., Jimbo, Y., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

664

2P333 Commissioning & evaluation of the gas detector for small-angle x-ray scattering measurement at BL40B2/SPring-8

Inoue, K., Helsby, William, Clague, Nick, Yagi, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 100 KB

2005

665

3P003 Application of a knowledge-based potential for a rotamer library to 3D model verification in protein structure prediction

Tomii, K., Hirokawa, T., Ota, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

666

3P004 Towards highresolution protein modeling : Fragment assembly method with an allatom energy function

Ito, H., Fujitsuka, Y., Chikenji, G., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

667

3P007 Development of profile-based potential for protein structure prediction

Shirakura, K., Ishida, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

668

3P018 X-ray structure of lipids in bovine heart Cytochrome c oxidase stabillized with 3-oxatridecyl-α-mannoside

Saitou, T., Hanada, M., Sugimura, T., Aoyama, H., Shinzawa-Itoh, K., Tsukihara, T., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 284 KB

2005

669

3P021 Induction factor of structure chnage of TF_1 epsilon subunit

Yagi, H., Kajiwara, N., Tanaka, H., Tsukihara, T., Yamada, Y., Yoshida, M., Akutsu, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

670

3P023 Analysis of dynorphin interaciton with extracellular loop II by solid state NMR

Eguchi, M., Miyamori, T., Sakai, T., Nishimura, K., Kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

671

3P028 The dynamical hierarchy of single molecule time series using a discrete wavelet transform analysis

Sato, S., Baba, A., Komatsuzaki, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

672

3P048 Structure of cytochrome c552 from a moderate thermophilic bacterium : Comparative study on the thermostability of cytochrome c

Nakamura, S., Ichiki, S., Takashima, H., Uchiyama, S., Hasegawa, J., Kobayashi, Y., Sambongi, Y., Ohkubo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

673

3P052 Mechanism of Amyloid-like Fibril Formation of Disulfide-Deficient Lysozyme

Takizawa, T., Kono, R., Ohkawa, T., Akasaka, K., Tachibana, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 285 KB

2005

674

3P053 Effect of octylglucoside on the stability of the conformation of OmpA in the presence of guanidine hydrochloride

Takahashi, M., Kameyama, K., Ishiguro, R., Katabuchi, M., Iida, R., Hiramatsu, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

675

3P055 A stable intermediate state detected in the thermal transition of cytochrome c under low salt concentration

Kidokoro, S., Nakamura, S., Baba, T., Seki, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

676

3P062 Intermolecular interaction of actin measured by dynamic light scattering

Kanzaki, N., Uyeda, T.Q.P, Onuma, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

677

3P064 Temperature jump timeresolved resonance Raman study of the heat denaturation process of cytochrome c

Nagano, Y., Gu, Y., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

678

3P067 Study of dynamics and mechanism of Tanford transition of bovine β-lactoglobulin

Sakurai, K., Goto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 280 KB

2005

679

3P069 An analysis of the folding nuclei determined by the protein engineering experiments on the basis of the hydrophobic effect

Nakamura, S., Narikiyo, O.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

680

3P086 Oxygen binding properties of recombinant human hemoglobin with heme rotational disorder

Aki-Jin, Y., Nagatomo, S., Yamamoto, Y., Nagai, M., Imai, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

681

3P093 Structural dynamics of oxygen sensor protein FixL following ligand dissociation

Hiruma, Y., Kikuchi, A., Shiro, Y., Mizutani, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

682

3P094 Attempt of real-time visualization of the conformational change in mitochondrial cytochrome bc_1 complex

Miki, T., Tani, T., Harada, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

683

3P096 Path(s) of the electron transportation from CPR to heme in rat heme oxygenase-1

Migita, C.T., Togashi, S., Zhang, X., Yoshida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

684

3P101 Red-Excited Resonance Raman Spectroscopy of Reaction Intermediates of Heme Enzymes

Ikemura, K., Shimada, H., Shinzawa-Ito, K., Yoshikawa, S., Ogura, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

685

3P103 CRYSTALLOGRAPHIC STUDY ON THE DIOXYGEN COMPLEX OF WILD-TYPE AND MUTANT CYTOCHROME P450CAM

Nagano, S., Poulos, Thomas

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

686

3P105 Roles of Glutamine189 at the Heme Distal Site in the Peroxidase Reaction of Prostaglandin H Synthase-2

Ichimura, S., Taniguchi, S., Morishima, I., Ishimori, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

687

3P106 Structural biological study of reaction intermediates of heme oxygenase

Unno, M., Ikeda-Saito, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

688

3P109 Diverse Effects of Amphipathic-Amphoteric Kosmotropes on the Oxygenation Properties of Human Hemoglobin A

Haga, Takehiko, Tsuneshige, Antonio

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

689

3P115 Cell-free synthesis of functional Paracoccus denitrificans cytochrome c oxidase

Katayama, Y., Ogura, T., Shimokata, K., Suematsu, M., Tsukihara, T., Yoshikawa, S., Shimada, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

690

3P117 Molecular dynamics simulation of water channel protein Aquaporin family

Hashido, M., Ikeguchi, M, Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

691

3P118 Molecular Dynamics Simulation of Phoborhodopsin/Transducer Complex

Nishikata, N., Hashido, M., Fuchigami, S., Ikeguchi, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

692

3P119 Topology prediction of the transmembrane herix by non-transmembrane reaion of membrane protein

Ohnishi, T., Tanaka, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

693

3P121 Effect of hydrophobic mismatch on thermodynamics for self-association of a trasmembrane helix

Yano, Y., Matsuzaki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

694

3P137 Vitrification of trehalose is required for larvae of polypedirum vanderplanki to survive desiccation

Furuki, T., Akao, K., Watanabe, M., Kikawada, T., Nakahara, Y., Okuda, T., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

695

3P140 Role of the electrostatic interaction in kinetics of DNA-surfactant complexe formation

Sasaki, S., Kawashima, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

696

3P141 Theoretical study on the stability of amphiphile aggregates: RISM approach

Miyata, T., Hiratra, F.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

697

3P142 solvation effect on dissociation of DNA : 3D-RISM analyses

Maruyama, Y., Kovalenko, Andriy, Hirata, F.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

698

2SD07 Morphological and structural changes in adipocytes during differentiation

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

699

3P147 Morphological investigations on freeze-control effects of sugar solutions via FE-TEM

Uchida, T., Nagayama, M., Shibayama, T., Gohara, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

700

3P154 Determination of the body axis of mammalian embryos : Computer simulation using the 3D polyhedral cell model

Honda, H., Hiiragi, T., Nagai, T., Tanemura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 285 KB

2005

701

3P156 On chip regulate differentiation and measure changing character of Neural Stem Cell

Shibata, K., Suzuki, I., Sugio, Y., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 285 KB

2005

702

3P157 Molecular dynamics study of structural stability of Cytochrome C_

Sugiyama, A., Takamatsu, Y., Nishikawa, K., Nagao, H., Nishikawa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

703

3P164 Confomations of epsilon subunit in F_1 forced-rotated by magnetic tweezers

Saita, E., Iino, R., Kato-Yamada, Y., Noji, H., Suzuki, T., Yoshida, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

704

3P165 Improvement of ATPsynthase crystals

Shirakihara, Y., Shiratori, A., Murakami, S., Adachi, H., Matumura, H., Takano, K., Inoue, G., Moti, Y., Sasaki, T., Suzuki, T., Yoshida, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

705

3P169 Small Lattice Gases Model for Micro Particles Transport Systems

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

706

3P186 Identification of the binding site for kinesin in minrotubule using mutant analysis of tubulin

Uchimura, S., Oguchi, Y., Nikawa, J., Ishiwata, S., Muto, E.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

707

3P190 Conformational change of Chlamydomonas inner-arm dynein f (II) by phosphorylation of IC138

Sakakibara, H., Sakai, Y., Burgess, Stanley, Oiwa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 253 KB

2005

708

3P194 Association of the MotX and MotY components with the basal body of the Na^+-driven flagellar motor of V.alginolyticus

Terashima, H., Fukuoka, H., Yakushi, T., Kanbe, M, Aizawa, S-I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

709

3P204 Avian influenza virus is more intelligent than human virus

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

710

3P225 Realtime measurement of 7TM-type receptor-mediated activation of heterotrimeric G-proteins in living cells

Kuwayama, H., Takahashi, M., Ueda, M., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

711

Subcellular localization of histidine kinases in Escherichia coli

Yoshimoto, M., Shiomi, D., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

712

Dynamic localization of glutamate receptors in synapses : stimulation-induced stabilization

Yoshida, H., Nakada, C., Hasegawa, R., Umeda, T., Okabe, S., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

713

Preparation of thin films using retinoic acid, coumarin and DMPC and their photo absorption and emission characteristics

Ito, M., Makino, Y., Hatasawa, T., Tsujiuchi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

714

Spontaneous Formation of Supported Lipid Bilayer Regulated by Surfactant

ISHIGURO, R., SUGIURA, T., KAMEYAMA, K., HIRAMATSU, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

715

Extraction of membrane proteins from proteoliposome using atomic force microscopy

Yasuda, M., Afrin, Rehana, Jacobson, Martin, Ikai, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

716

Flow cytometric analysis of cell-sized liposomes : novel approach toward construction of an artificial cell model

Sato, K., Ishikawa, K., Obinata, K., Wei, Yu, Wakabayashi, M., Naksidhi, T., Mitamura, Elizabeth, Shima, Y., Sugawara, T., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

717

Sugar-sugar interactions of ganglio side/cholesterol mixtures

Abe, S., Takahashi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

718

Effects of hexadecanol on stability of gel phases of lipid membranes

Okamoto, Y., Yahagi, T., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 281 KB

2005

719

3P255 Effects of mental task and caffeine intake on NIRS signal

Seiyama, A., Higashi, T., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

720

3P266 Analysis of synaptic localization of estrogen receptor in the rat hippocampus

Mukai, H., Murakami, G., Kominami, S., Janssen, William, Morrison, John, Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

721

3P267 Female hormone changes the morphology of spines on hippocampal neurons

Tsurugizawa, T., Tanabe, N., Mitsuhashi, K., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

722

3P272 Structural coupling of Ca^ with the oxygen evolving Mn cluster: FTIR analysis by Sr^ substitution

Suzuki, H., Taguchi, Y., Sugiura, M., Boussac, Alain, Noguchi, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

723

3P280 Nanoscale organization of Bacteriochlorophyll c in mesoporous silica

Ogawa, M., Oda, I., Kajino, T., Fukushima, Y., Nango, M., Shibata, Y., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

724

3P286 Study of reaction center using Zncontaining bacteriochlorophyll in a purple bacterium Acidiphilium rubrum

Ikeda, Y., Tomii, T., Mino, H., Itoh, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

725

3P292 Alteration in oxidative stress responses by the pretreatment with CoCl_2

Nomura, Y., Fujiwara, H., Sato, M., Takahashi, E., Feng, Z., Nakamura, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

726

3P294 Development of synchrotron X-ray microbeam irradiation system for radiobiology

Usami, N., Kobayashi, K., Eguchi-Kasai, K., Maezawa, H., Takakura, K., Hieda, K., Hayashi, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

727

3P304 Prediction of cis-regulatory DNAs in the ascidian genome by comparative genomics and computational methods

Kusakabe, T., Park, Keun-Joon, Sierro, Nicolas, Yamasjhita, R., Horie, T., Yoshida, R., Tsuda, M., Nakai, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

728

3SC55 Plasticity, constraints, and morphological homology in vertebrate development and evolution

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 186 KB

2005

729

3SD51 Structural Biology with Advanced Biomolecular Spectroscopy: from Structural Dynamics to Function

Kataoka, M., Joti, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 186 KB

2005

730

3P313 On an abstract dynamical system with autonomous parameter dynamics

Haruna, T., Gunji, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

731

3P323 Micro-rotary motor driven by Mycoplasma mobile

Hiratsuka, Y., Miyata, M., Uyeda, T.Q.P.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

732

3P328 Functional and structural analysis of recombinant Horse Spleen ferritin with N-terminal amino-acid deletion

Mishima, Y., Iwahori, K., Park, S.-Y., Heddle, Jonathan, Tame, Jeremy R.H., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

733

3P343 Change of cell membrane complex of a hair fiber caused by hair damage

fujiyama, T., shimizu, H., kawasoe, T., Ohta, N., Inoue, K., Yagi, N., Hatta, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 282 KB

2005

734

3SD54 Dynamic behavior of biomolecules monitored by Raman spectroscopy

Sugawara, Y., Urabe, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

735

3P349 Visualization of the transition from the prey-predator to symbiotic relationship between Escherichia coli and Dictyostelium discoideum

K., Kumiko, Suzuki, S., Kashiwagi, A., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 209 KB

2005

736

10.2142/biophys.45.s299

Ferrara, Joseph

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 280 KB

2005

737

3SE52 Channel structure reconstruction: single Particle analsis from electron microscopy using ion channels

Ogura, T., Mio, K., Sato, C.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

738

3SE55 Vibrational Spectroscopic Study on Proton Pumping Mechanism of Cytochrome c Oxidase

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

739

1SA54 Biophysics of Molecular Motors("Japan-Australia Joint Symposium on Biophysics" (English Session))

Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 227 KB

english, 2005

740

1SB01 Single-molecule kinetics of Ras/Rafl interactions in limited areas in the plasma membrane

Hibino, K., Sako, Y.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 227 KB

english, 2005

741

10.2142/biophys.45.s302_2

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 97 KB

2005

742

10.2142/biophys.45.s303_1

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 356 KB

2005

743

3SE56 Proton Pumping Mechanism of Cytochrome c Oxidase Based on High-Resolution X-ray Analyses

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

744

3SF51 Center of Excellence for Advanced Life Science on the Base of Bioscience and Nanotechnology

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

745

1P019 Crystal structure of the serine protease from Aeromonas sobria

Utsunomiya, H., Katunuma, N., Kobayashi, H., Yamanaka, H., Fujiki, H., Okamoto, K., Tsuge, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 292 KB

2005

746

1P020 X-ray crystallographic analysis of ferritin mutants

Nagashima, S., Iwahori, K., Imada, K., Namba, K., Yamashita, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 292 KB

2005

747

1P037 Structural change and recognition function of MutT

Higuchi, M., Ishige, H., Kitao, A., Yamagata, Y., Go, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

748

1P038 Thermodynamic properties of Specific interaction between telomere end-binding protein Pot1 and singlestranded telomeric DNA

Furukawa, A., Torigoe, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

749

1P040 Conformational change dynamics in adenylate kinase : Ligand binding induces the intrinsic dynamics

Fuchigami, S., Ikeguchi, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

750

1P045 Crystal structure of 2-Deoxyribose-5-PhosphateAldolase from hyperthermophilic archaeon Pyrobaculum aerophilum

Yoneda, K., Yoshihara, K., Sakuraba, H., Tsuge, H., Katunuma, N., Ohshima, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

751

1P053 Functions of Characteristic C-term region of ASABF, Antibacterial Peptide Isolated from the Nematode Ascaris suum

Nakano, M., Aizawa, T., Miura, K., Hoshino, H., Miyazawa, M., Kato, Y., Kumaki, Y., Demura, M., Tsuda, S., Kawano, K., Nitta, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

752

1P058 Functional and three-dimensional structure analysis of the Ca^-dependent type II antifreeze protein from Japanese smelt

Yasui, M., Kondo, H., Nishimiya, Y., Noro, N., Miura, K., Takamichi, M., Miura, A., Tsuda, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 286 KB

2005

753

1P063 Relationship between structural changes of bacteriorhodopsin upon alkalinization and irreversible photobleaching

Yokoyama, Y., Sonoyama, M., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

754

1P064 Conformational change of E.coli OmpA in the presence of guanidine hydrochloride

Katabuchi, M., Kameyama, K., Ishiguro, R., Takahashi, M., Kashimoto, A., Hiramatsu, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

755

1P066 Hydration effects on the thermal stability of collagen model peptide, (4(R)-hydroxyprolyl-4(R)-hydroxyprolyl-Gly)_

Nishi, Y., Kawahara, K., Nakamura, S., Uchiyama, S., Nishiuchi, Y., Nakazawa, T., Ohkubo, T., Kobayashi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

756

1P068 Thermodynamic study on protein stabilization induced by macromolecular crowding

Suga, Y., Gekko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

757

1P070 The effect of thermal aggregation inhibitors on thermal-assisted refolding

Hamada, H., Shiraki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

758

1P073 The effect of osmolytes on the conformational stability of a hyperthermophilic protein

Mukaiyama, A., Koga, Y., Takano, K., Kanaya, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

759

1P075 Pressure-tuning FT-IR spectroscopic study of the secondary structure of insulin amyloid fibril

Yokota, R., Kato, M., Taniguchi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

760

1P081 Is Prion a downhill folder?

Kuwata, K., Nakamura, H., Kamatari, Y., Matumoto, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

761

1P088 Evaluation of second structures of calmodulin using by infrared spectroscopic analysis

Sasakura, D., Furutoh, K., Miura, T., Nunomura, W., Takakuwa, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

762

1P090 The structure and volume change on the multi-state thermal transition of the moltenglobule state of cytochrome c

Nakamura, S., Baba, T., Seki, Y., Kidokoro, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

763

1P104 Conformational preference in the tetrahedral intermediates of the acylation step of ester hydrolysis catalyzed by lipases and esterases

Takano, Y., Houk, K.N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

764

1P108 Understanding the Mechanism of ATP-dependent protein unfolding and translocation by the Molecular Dynamics Simulation

Takeuchi, S., Takada, S., Koga, N., Kobayashi, C.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

765

1SD02 SOME NEW WAYS TO LOOK AT HOW PROTEINS BEHAVE

Stephen, Berry R., Jun, Lu, Chi, Zhang

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 218 KB

2005

766

1P115 Kinetics of the ATPase and phosphorylation activities of circadian clock protein KaiC from Thermosynechococcus elongates BP-1

Miyake, A., Hayashi, F., Iwase, R., Ishiura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

767

1P134 Inhibition of actin polymerization

Oda, T., Maeda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

768

1P143 Diameter measurements of single skeletal myofibrils by use of Atomic Force Microscope

Hamazaki, A., Miyashiro, D., Akiyama, N., Kunioka, Y., Yamada, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

769

1P150 Development of the single molecule imaging system of the F_o motor

Ueno, H., Tabata, K., Suzuki, T., Iino, R., Ide, T., Yoshida, M., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

770

1SD04 Time scales to attain local ergodicity through vibrational relaxation in proteins

Fujisaki, Hiroshi, Zhang, Yong, STRAUB, JOHN E.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 153 KB

english, 2005

771

1P157 Image Analysis of Actin-Filament as Visualized by Quick-Freeze Replication

Kimori, Y., Oguchi, Y., Ichise, N., Baba, N., Katayama, E.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 247 KB

2005

772

1P168 Single molecule mechanics of higher plant myosin with high resolution nanometry

Asano, Y., Tominaga, M., Nakamori, R., Kojima, H., Oiwa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

773

1P177 Transition of binding states of each kinesin head in the presence of ATP

Akiyama, R., Oguchi, Y., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

774

1SE02 Archaeal type rhodopsin gene expression and distribution in extremely halophilic Archaea

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

775

1P203 Structure and properties of the ODA-DC, a protein complex that anchors outer dynein arms to axonemal microtubules

Wakabayashi, K., Okawa, A., Yagi, T., Kamiya, R.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 265 KB

english, 2005

776

1P207 Observation of the stress fiber deformation on cell detachment by applying shear force

Yamamoto, A., Sakamoto, H., Hanawa, T., Kanazawa, K.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 282 KB

english, 2005

777

1P209 FCS measurement in perfused liver - beyond the cell biology

Saito, Y., Horita, S., Tamura, M., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

778

1P217 Effect of regenerated fibroin on planar bilayer membrane

Toshima, Y., Tamada, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 231 KB

2005

779

1P226 Electron microscopic observation of Na^+/K^+-ATPase using quick-freezing replica technique

Kawasaki, K., Kobayashi, E., Sakamaki, Y., Tahara, Y., Hayashi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

780

1P228 Solid state NMR study of interaction between PLC-deltal EF-hand domain and lipid bilayer

Tanaka, S., Okada, M., Yagisawa, H., Tuzi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

781

1P229 Evaluation of the membrane-binding capacity of the Phospholipase C-deltal PH domain through the non-specific and hydrophobic interaction

Uekama, N., Sugita, T., Okada, M., Yagisawa, H., Tuzi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

782

1SE08 Time-resolved detection of spectrally silent dynamics of protein reactions

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

783

1P244 mRNA analysis of enzymes for brain neurosteroid synthesis in the postnatal and adult rat hippocampus

Ishii, H., Sonoki, Y., Furukawa, A., Hojo, Y., Kimoto, T., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 231 KB

2005

784

1P257 Proton transfer in Photoactive Yellow Protein(PYP)

Kamiya, M., Saito, S., Ohmine, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

785

1P258 Assignment of Raman Spectra of Dark State Photoactive Yellow Protein

Unno, M., Kumauchi, M., Tokunaga, F., Yamauchi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

786

1P263 Effect of interactions between N-terminal and C-terminal part on photoreaction of photoactive yellow protein

Harigai, M., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

787

1P271 Effects of CP-channel mutant halorhodopsin, K215R on photo-intermediates

Saito, Y., Kubo, M., Sato, M., Kikukawa, T., Aizawa, T., Kamo, N., Nitta, K., Kawano, K., Demura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

788

1SF02 PX domain as a signaling modulator

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 219 KB

2005

789

10.2142/biophys.45.cover14

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 141 KB

2005

790

10.2142/biophys.45.index1

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 1.49 MB

english, 2005

791

1P297 Construction and analysis of the time evolution equation for the distribution of cells forthe growth rate depending on the variable

Sato, K., Kaneko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

792

1P298 Maximization of the growth rate in metabolic systems

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

793

1P310 Modeling and simulations of bacteria with Proteus mirabilis-like life cycle

Nakano, K., Morikawa, R., Hayashi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

794

1P341 Observation of ice embedded cyanobacteria by Hilbert differential contrast TEM

Kaneko, Y., Nitta, K., Danev, Radostin, Nakamoto, H., Nagayama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 304 KB

2005

795

1P347 Development of reversible protein highlighting techniques

Ando, R., Mizuno, H., Miyawaki, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

796

2P002 Secondary structure assignment by consecutive pattern of main chain dihedral angles, and its estimation for beta strand structure

Ohuchi, S., Osoegawa, H., Konko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

797

2P012 Crystallographic study of Paa proteins involved in catabolism of phenylacetic acid

Kida, H., Iino, H., Nakagawa, N., Hisano, T., Fujihashi, M., Kita, A., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

798

2P031 Dynamic polymorphism of actin molecules in the act in filament

Kozuka, J., Yokota, H., Ishii, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

799

2P034 Database analysis of local structural changes in proteins

Koike, R., Fuchigami, S., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

800

2P040 Relaxation of a peptide bond planarity in biological systems

Chiba, K., Tsutsumi, Y., Ohhara, T., Nakanishi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

801

2P061 Conformational Fluctuations of Proteins from an Inherent Structure Landscape

Nakagawa, N., Peyrard, Michel

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

802

2P080 Growth and Dissociation of Protofibrils from A Disulfide-Deficient Variant of Hen Lysozyme using AFM and 1H NMR

Kono, R, Kamatari, O., Tachibana, H., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

803

2P090 NMR elucidation of the unusually slow folding mechanism of a protein from a hyperthermophile : NMR peak assignment and H/D exchange reaction

Iimura, S., Umezaki, T., Yagi, H., Ogasahara, K., Akutsu, H., Noda, Y., Segawa, S., Yutani, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

804

2P107 The role of electrostatics in protein from charge distribution analysis of all amino acid sequences in genomes

Ke, R., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

805

2P114 Tryptophan rotomer in protein crystals

Nishimoto, E., Matsumoto, S., Yamashita, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

806

2P115 Development of a single molecule microscope with rapid solution switching system

Sameshima, T., Sato, Y., Ueno, T., Arakawa, T., Shirasaki, Y., Shoji, S., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

807

2P120 Development of electron microscopic images classification method by integration of principal component analysis with cluster analysis

Sumikura, H., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

808

1SD52 A functional role of coherent neuronal activity in cortical networks

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

809

2P121 Development of novel automated determination method of contrast transfer function of electron microscopic images

Imamura, M., Yaunaga, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

810

2P125 Programmable Step-by-Step Assembly of DNA Nanostructures

Tagawa-Nagano, M., Kiga, D., Yoshinobu, T., Iwasaki, H., Suyama, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

811

2P126 Large-capacity molecular memory using hairpin DNA immobilized on a substrate

Endoh, T., Takinoue, M., Suyama, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

812

2P130 Analysis of the probe dependent effects on hybridization of random sequence DNA

ONO, N., Suzuki, S., Furusawa, C., Kashiwagi, A., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

813

2P152 ESR measurement of tropomyosin molecule on the thin filament by sitedirected spin label scanning

Ueda, K., Aihara, T., Ueki, S., Kimura, C., Miki, M., Arata, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

814

1SD56 Dynamic Predictive Coding by the Retina

Hosoya, T., Baccus, Stephen, Meister, Markus

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

815

1SE51 Structural biology of interactome

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

816

2P164 Microscopic measurement of the cross-sectional area of a myofibril in SPOC

Kono, F., Shimamoto, Y., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

817

2P169 Molecular interaction between two troponin C and four troponin I of Caenorhabditis elegans

Amin, Ziaul, Ruksana, Razia, Takaya, T., Kagawa, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 251 KB

2005

818

2P201 The structural relaxation of myosin motor domain and nucleotide dissociation : Molecular dynamics simulations

Takagi, F., Kikuchi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 264 KB

2005

819

2P227 Analysis of cellular function by controlling morphology using the temperature-sensitive culture substrate

Yamaki, K., Harada, I., Akaike, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

820

2P234 Three-dimensional structure of the ligandbinding domain of the serine chemoreceptor Tsr

Tajima, H., Imada, K., Sakuma, M., Sumii, M., Nara, T., Kamo, N., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

821

2SA01 Electronic digital information processing and bioinformation processing

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 198 KB

2005

822

2P246 Study on thermodynamic stable states of DMPC/Melittin system

Tamatsukuri, K., Ohba, T., Ohki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

823

2P259 Molecular Orbital Study of Phospholipid Liposome

Kagawa, H., Ogihara, T., Matsubayashi, Y., Mori, K., Ohe, C., Tamura, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 287 KB

2005

824

2P272 A FRET study of conformational change of Halobacterium transducer II induced by photoactivation of phoborhodopsin

Taniguchi, Y., Ikehara, T., Sudo, Y., Shimono, K., Kamo, N., Watanabe, Y., Toyoshima, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

825

2P281 Internal water molecules in the alkaline and acidic forms of Proteorhodopsin

Ikeda, D., Furutani, Y., Shibata, M., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

826

2P313 Surface enhanced Raman scattering and emission spectra of adsorbed molecules on Ag nanoparticles

Maruyama, Y., Futamata, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

827

3P024 Solution Structure of the SH3 Domain of the Human SRC-like Adopter Protein (SLAP) Reveals A Novel Molecular Recognition Mechanism

Ohnishi, S., Tochio, N., Sato, M., Koshiba, S., Nameki, N., Inoue, M., Kigawa, T., Yokoyama, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

828

3P036 Molecular dynamics simulaion of prion using Janus-type Go model

Nakamura, H.K., Takano, M., Kuwata, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 247 KB

2005

829

3P058 Effect of pressure on the tertiary structure of cytochrome c

Ikeuchi, Y., Taniguchi, Y., Kato, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 276 KB

2005

830

2SD01 Gravitational response and molecular chaperone

Oguro, A., Sakurai, T., Atomi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

831

3P139 Terahertz Attenuated Total Reflection Spectroscopy of liquid water and solutions

Kenmochi, A., Tanabe, T., Oyma, Y., Suto, K., Nishizawa, J., Sasaki, T., Tanno, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

832

3P161 Molecular dynamics simulation of Fo motor driven by chemical potential of proton

Yamasaki, H., Takano, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

833

3P196 Dissection of role of MotY in the Na^+-driven flagellar rotation of Vibrio alginolyticus

Yagasaki, J., Okabe, M., Kurebayashi, R., Yakushi, T., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

834

Structural stability of liquid-crystalline membranes composed of highly fluorinated ether phospholipids

Baba, T., Takai, K., Takagi, T., Kanamori, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

835

3P252 Bindingmechanism of beta-endorphin to un- or saturated phospholipids bilayers using solid state NMR

Harada, A., Nishimura, K., Yokoyama, M., Kira, A., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 281 KB

2005

836

3P264 Crossed barberpole illusion and contour perception

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 253 KB

2005

837

3P275 Mechanism of triplet-state formation on the accessory chlorophyll in the reaction center of photosystem II

Saito, K., Mukai, K., Sumi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

838

3P298 Construction of experimental symbiosis system using nutrient-deficient E. coli

Shiroguchi, Y., Yamauchi, Y., Kashiwagi, A., Mori, K., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 296 KB

2005

839

3P305 Comparative Genomics of Eukaryotic Transcription Factors

Minezaki, Y., Nishikawa, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

840

3P311 Stability against stochastic fluctuations of yeast cell cycle

Okabe, Y., Sasai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

841

3P315 Temporal pattern formation in conformational sizes of a self-oscillating polymer

Ueda, M., Sakai, T., Hara, Y., Yoshida, R., Ito, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

842

3P325 Developments of a multi branching fluid channel sorter using thermosensitive hydrogel

Sugino, H., Shirasaki, Y., Tatsuoka, M., Tsutsui, K., Mizuno, J., Shoji, S., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

843

3P335 High-ordered structuration of nanostructured metal oxide by biomineralization

Umetsu, M., Mizuta, M., Tsumoto, K., Ohara, S., Takami, S., Watanabe, I., Kumagai, I., Adschiri, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

844

10.2142/biophys.45.s295

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 101 KB

2005

845

3SE53 Molecular assembly of giant hemoglobin

Numoto, N., Nakagawa, T., Kita, A., Sasayama, Y., Fukumori, Y., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

846

10.2142/biophys.45.s302_1

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 97 KB

2005

847

1P009 Accessibility of solvent to peptide backbone of S100B on calcium binding

Murayama, K., Matsuda, S.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 238 KB

english, 2005

848

1P010 Characterization of oligomeric forms of human Prion Protein HuPrP^c(23-231) by CD, AFM, and Fluorescence spectroscopy

Sasaki, K., Gaikwad, K., Akasaka, K., Kitamoto, S., Hashiguchi, S., Sugimura, K.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 238 KB

english, 2005

849

1P012 pH dependence of amyloid fibril structures of b2-microglobulin fragment peptides investigated by IR spectroscopy

Lu, M., Hiramatsu, H., Goto, Y., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 238 KB

english, 2005

850

1P018 Crystal structure of esterase A4 that acts alone as a molecular clock

Hiraki, T., Shibayama, N., Tame, Jeremy R.H., Park, S.-Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 292 KB

2005

851

1P024 A highly efficient isotopic labeled protein by using wheat germ cell-free protein synthesis system and an application to NMR technologies

Iihara, A., Nara, Y., Kitano, M., Matsubara, K., Kohno, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

852

1P035 Structure, Stability, and Function of Deletion Mutants atβC-βD Loop of Dihydrofolate Reductase from Escherichia coli

Horiuchi, Yuji, Ohmae, Eiji, Gekko, Kunihiko

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

853

1P039 Structural change of protein described by linear response theory

Omori,, Fuchigami, S., Ikeguchi, M., Kidera, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

854

1P049 Single molecule FRET observation of conformation in mutant Ras incorporated fluorescence dye into the its SwitchII region

ARAI, Y., Wazawa, T., Iwane, A., Yokota, H., Ishii, Y., Kataoka, T., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

855

1P059 Protein folding and its structure change of spider dragline silk

Miyazawa, M., Yukuhiro, K., Mita, K., Katayama, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 286 KB

2005

856

1P060 Chaotic time series analysis of collective motions in proteins

Matsunaga, Y., Biu, Li Chun, Komatsuzaki, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 286 KB

2005

857

1P078 Native protein sequences are designed to destabilize their folding intermediates

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

858

1P079 Mechanism of amyloid formation by beta-lactoglobulin and its relationship with its folding process

Hamada, D., Tanaka, N., Tanaka, T., Yanagihara, I., Pawar, Amol, Vendruscolo, Michele, Dobson, Christopher

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

859

1P097 Transition from non-amyloidogenic aggregates to amyloid fibrils

Sasahara, K., Naiki, H., Goto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 193 KB

english, 2005

860

1P121 Selection of HIV RRE-binding peptides from complex arginine-rich libraries

Sugaya, M., Nishino, N., Katoh, A., Harada, K.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 242 KB

english, 2005

861

1P139 Synthesis of actin filaments using cell free transcription and translation system

Okatani, M., Yamagishi, M., Ueno, T., Funatsu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

862

1P175 The effect on kinesin movement by MAP4 isoforms and its physiological role

Noguchi, T., Matsushima, K., Kotani, S., Tokuraku, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

863

1P186 Roles of FliK central domain in the hook-length control in Salmonella

Takahashi, N., Shibata, S., Aizawa, S., Kelly, Huehes

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

864

1P192 X-ray structural analysis of the cytoplasmic domain of FlhA, a membrane-protein of the bacterial flagellar protein-export apparatus

Saijo-Hamano, Y., Imada, K., Minamino, T., Kihara, May, Macnab, Robert M., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

865

1P196 Single-molecule analysis of the association between epidermal growth factor and its receptor on the living cells

Uyemura, T., Takagi, H., Yanagida, T., Sako, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 284 KB

2005

866

1P200 Singlemolecule tracking of raftophilic molecules in the compartmentalized plasma membrane

Umemra, Y., Fujiwara, T., Suzuki, K., Vrljic, Marija, Nishimura, Stefanie Y., Brasselet, Sophie, Mnerner, W.E., Mc-Connell, Harden M., Kusumi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

867

1P201 A Chlamydomonas Flagellar Mutant with Abnormal Outer Dynein Arms Lacking Functional Gamma Heavy Chain

Liu, Zhongmei, Nakazawa, Yuuki, Yagi, Toshiki, Kamiya, Ritsu

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 265 KB

english, 2005

868

1P211 Cellular fluctuation and gradient sensing

Shibata, T., Ueda, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

869

1P213 Intracellular calcium dispersion and cell cycle

Ohnuma, K., Asashima, M., Kaneko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 216 KB

2005

870

1P222 Shape transitions of vesicles in shear and capillary flows

Noguchi, H., Gompper, Gerhard

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

871

1P237 Protective Effect of Chemicals from Freezing on Neuron derived from Cerebral Cortex

Motomura, J., Utida, T., Nagayama, M., gohara, K., Taira, T., Shimizu, K., Sakai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

872

1P259 pH-dependence of the photocycle of photoactive yellow protein

Imamoto, Y., Harigai, M., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

873

1P264 Heat capacity of the transient species during photo-reaction of PYP

Khan, Javaid Shahbaz, Imamoto, Yasushi, Kataoka, Mikio, Tokunaga, Fumio, Terazima, Masahide

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

874

10.2142/biophys.45.app50

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 112 KB

2005

875

10.2142/biophys.45.app51

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 112 KB

2005

876

1P273 Comparative study of the 13-cis and all-trans forms of Anabaena sensory rhodopsin by low-tempreature FTIR spectroscopy

Kawanabe, A., Furutani, Y., Jung, Kwang-Hwan, Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

877

1P293 Analysis of irregular transmembrane helices to develop a new transmembrane topology prediction method

Kimura, T., Ogawa, K., Arai, M., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

878

1P304 On conditions for cell-type diversity of multicellular organisms

Yoshida, H., Anai, H., Orii, S., Kaneko, K., Horimoto, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 206 KB

2005

879

1P311 Dendritic pattern formation in the discrete reaction-diffusion model

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

880

1P325 Singlemolecule imaging of yeast prion fiber using total internal reflection microscopy

Saitoh, S., Kishimoto, A., Ueno, T., Funatsu, T., Taguchi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

881

1P328 Advanced method to detect z-directed motility of molecular motors

Okada, K. T., Mizutani, K. Q. T., Masaike, T., Nishizaka, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

882

1P340 Improvement of a cryo atomic force microscope for structual analysis of biomolecules

Mori, T., Yamamoto, D., Goto, T., Kouyama, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

883

1SB52 The mechanism of force generation by myosin motors: transmission of effects from the ATPase active site to the lever arm

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 240 KB

2005

884

2P025 Auto-accumulation method using simulated annealing enables fully automatic particle pick up

Ogura, T., Sato, C.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

885

2P026 Visualization of domain structure of glucosyltransferase-I by electron cryo-microscopy

Yaji, N., Yasunaga, T., Komatsu, H., Kodama, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

886

2P058 Molecular mechanism of aspartate racemase from hyperthermophilic archaeum analyzed by spontaneous MD docking simulations

Okada, O., Seko, T., Yohda, M.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 251 KB

english, 2005

887

2P071 Protein-solvent interaction upon the acid denaturation of apomyoglobin

Baden, N., Terazima, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

888

2P112 Secondary-structure prediction of poroteins by vacuum-ultraviolet circular dichroism spectroscopy

Matsuo, K., Watanabe, H., Namatame, H., Taniguchi, M., Gekko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

889

2P123 The effect of local nucleotide structure on the global flexibility of circular DNA deduced from normal mode analysis

Matsumoto, Atsushi, Tobias, Irwin, Olson, Wilma

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

890

2P127 Hairpin-like DNA structure formation and minisatellite DNA instability

Kato, M., Haku, T., Minoshima, S., Nagayama, K., Shimizu, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

891

2P137 NMR structural analysis of the CGG/CGG containing DNA complexed with the recognition drugs

Nomura, M., Hagihara, S., Goto, Y., Nakatani, K., Kojima, C.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 262 KB

2005

892

2P154 The effects of point mutation in the region 146-174 of Tm on the regulationability and the thermal stability

Kusakabe, T., Kimura, C., Sakuma, A., Onoue, A., Miki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

893

2P197 Kinetic mechanism of the kinesin steps

Taniguchi, Y., Nishiyama, M., Ishii, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

894

1SE53 Sample manipulation for interaction analysis of macromolecular complex

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

895

2P205 A single CheY regulates two different flagellar motors in different ways in Vibrio alginolyticus

Kojima, M., Kubo, M., Homma, M., Kawagishi, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

896

2P242 Effect of Peptides and Ions Interacting with Electrically Neutral Membrane Interface on Structure of Lipid Membranes in the Lo Phase

Sano, R., Masum, Shah Md, Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 238 KB

english, 2005

897

2P250 Mechanics of cell membrane and lipid layer by Atomic Force Microscopy

Oka, M., Yasuda, M., Uehara, H., Rehana, Afrin, Sekiguchi, H., Ikai, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 239 KB

2005

898

2P267 Coupled K+ water flux measured by a novel osmotic pulse method under the whole-cell patch-clamp configuration

Ando, H., Kuno, M., Shimizu, H., Muramatsu, I., Oiki, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

899

2P269 Laser induced dynamics in cellular systems

Tanimura, N., Yamashita, T., Nakabayashi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

900

2SB01 Redox Sensory Mechanism of Heme PAS Domain from E. coli

Kurokawa, H., Shimizu, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

901

2P295 Pump-dump-fluorescence spectroscopy of photoactive proteins

Nakamura, R., Okafuji, A., Hamada, N., Ichida, H., Tokunaga, F., Kanematsu, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

902

2P309 Software system for the prediction of mitochondria localization on the basis of physicochemical profiles in amino terminal segments

Tsuji, T., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

903

ISA52 Biophysics of mechanosensitive channels in eukaryotes("Japan-Australia Joint Symposium on Biophysics" (English Session))

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 218 KB

2005

904

2P330 Dielectric dispersion of lysed erythrocytes

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

905

3P073 Optimization of amino-acid substitutions in engineered phenylacetaldehyde dehydrogenase

Makino, Y., Dairi, T., Itoh, N.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 245 KB

english, 2005

906

3P079 Directed evolution of unstructured protein based on ligand binding property

Yanagida, H., Matsuura, T., Tamura, A., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

907

3P080 Directed evolution of active RNA dependent RNA polymerase with the aid of green fluorescent protein folding reporter

Takita, M., Ito, Y., Tsukada, K., Matsuura, T., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

908

3P082 Electron Paramagnetic Resonance Analysis of Mn^Mb with an S=2 Integer Spin

Horitani, M., Yashio, H., Hagiwara, M., Hori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

909

3P095 Simulation of giant hemoglobin of Oligobrachia mashikoi

Nagao, H., Sugiyama, A., Yamamoto, T., Takamatsu, Y., Fukumori, Y., Numoto, N., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

910

3P100 A Novel Fiber Optic Apparatus for Resonance Raman Measurements of Photolabile Protein Species

Hashizume, W., Ogura, T., I., Kyoko, Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

911

3P107 The CO dependent activation mechanism of a transcriptional factor CooA

Yamashita, T., Hoashi, Y., Watanabe, K., Tomisugi, Y., Ishikawa, Y., Yamagata, Y., Uno, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

912

3P120 Purification and crystallization of membrane bound nitric oxide reductase from Pseudomonas aeruginosa

Hino, T., Kumita, H., Fukumori, Y., Shiro, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

913

3P125 Correlation between anion binding and the mechanism of oligomer formation for membrane protein halorhodopsin

Sasaki, T., Aizwa, T., Kamo, N., Nitta, K., Kawano, K., Demura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

914

3P136 Structural polymorphism and growth of actin complex in polyelectrolyte system

Kwon, H.J., Shikinaka, M., Kakugo, A., Hurukawa, H., Gong, Jianping, Osada, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 211 KB

2005

915

3P162 Development of new experimental system toward the visualization of the rotation of V-ATPase driven by the membrane potential

Iino, R., Nakano, M., Tabata, K., Imamura, H., Tamakoshi, M., Yokoyama, K., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

916

3P181 A domain structure of dynactin subunit dynamitin(p50)

Tanimoto, H., Maeda, K., Imai, H., Maeda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

917

2SE06 NMR structural biology of protein glycosylation

Yamaguchi, Y., Takahashi, N., Kato, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

918

3P192 Three-dimensional Structure of cytoplasmic dynein by electron cryomicroscopy

Yasunaga, T., Saitoh, R., Kon, T., Nishiura, M., Sutoh, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 253 KB

2005

919

3P195 Crystallization of MotY, the motor protein of Na^+-driven flagella : Improvement of crystallization and heavy-atom derivative

Shinohara, A., Sakuma, M., Yakushi, T., Imada, K., Homma, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

920

3P200 Proton translocation in the MotA/MotB stator complex of the bacterial flagellar motor

Che, YS., Kojima, S., Minamino, T., Kami-ike, N., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

921

3P205 Nerve growth factor induced activation of membrane and cytoskelton in PC12 Cells

Takahashi, M., Jeromin, A, Roder, J, Miyata, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 224 KB

2005

922

3P216 The effects of Monoterpenes and Vitamins on pathogenisis gene expression of Salmonella typhimurium

Mizusaki, H., Yamasaki, Y., Akimitsu, K., Aizawa, S.-I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

923

3P217 Molecular mechanisms of gravity sensing in Arabidopsis seedlings

Toyota, M., Furuichi, T., Tatsumi, H., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

924

Quantitative analysis of spatial pattern of cell network and cell community effect by using cardiac myocyte

Kojima, K., Kaneko, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

925

Distribution of antiGM3 molecules on the membranes of(DPPC+GM3) and (DOPC+GM3)

Yamada, H., Matuoka, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

926

3SC53 Phenotypic Plasticity and Evolvability of Cellular Systems

Furusawa, C., Kaneko, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 227 KB

2005

927

3P279 Estimation of the number of bacteriochlorophyll-c molecules within a chlorosome by singleapparatus observation at cryogenic temperature

Shibata, Y., Saga, Y., Tamiaki, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

928

3P327 Control of protein function by injecting carriers from semiconductor

Oda, M., Nakayama, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

929

1SA55 IGF BINDING PROTEINS: FLEXIBILITY AND FUNCTION("Japan-Australia Joint Symposium on Biophysics" (English Session))

Norton, Raymond, Kuang, Zhihe, Yao, Shenggen, Keizer, David, Wang, Chunxiao, McNeil, Kerrie, Forbes, Briony, Wallace, John, Bach, Leon

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 227 KB

english, 2005

930

10.2142/biophys.45.s303_2

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 356 KB

2005

931

1P008 Refinement of Comparative-Modeled Protein Structure by Multicanonical Molecular Dynamics

Ishitani, R., Terada, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

932

1P022 Structural analysis of ferredoxin dependent bilin reductase, PcyA

Sugishima, M., Hagiwara, Y., Takahashi, Y., Fukuyama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

933

1P026 Structural analysis of proteins in aqueous solution by distance geometry method: structural refinement by simulated annealing

Yamane, T., Ikeguchi, M., Kidera, A., Okamura, H., Nishimura, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 294 KB

2005

934

1P031 Physicochemical Analysis of the Functions of Peptidyl-Prolyl cis/trans Isomerase, human FKBP12

Ikura, T., Ito, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

935

1SB07 Analysis of dynamic changes of the morphology of spines in hippocampus

Tsurugizawa, T., Tanabe, N., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 224 KB

2005

936

1P087 Iso-1-Cytochrome c Folding Studied by a New Method of Single Molecule Detection

Kinoshita, M., Goto, Y., Takahashi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

937

1P093 Hydration effect on the low-energy molecular dynamics of Hen-Egg-White-Lysozyme by inelastic neutron scattering

Shibata, K., Nakagawa, H., Fujiwara, S., Joti, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

938

1P103 A solvent site-dipole field mediating DNA-protein binding

hamasaki, N., mitomo, D., higo, J., yamagishi, A., miyagawa, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

939

1P110 Activity of recombinant antifreeze protein from basidiomycetes, Typhula ishikariensis

Suzuki, K., Fujiwara, M., Hoshino, T., Ohgiya, S., Tsuda, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

940

1P118 Functional analysis of concatenated group II chaperonin mutant

KANZAKI, T., IIZUKA, R., FURUTANI, M., YOHDA, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

941

1P125 Structural basis for anticodon recognition by methionyl-tRNA synthetase

Nakanishi, K., Ogiso, Y., Nakama, T., Fukai, S., Nureki, O.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

942

1SD06 Dynamical Foundation for Molecular Function of Proteins in the Multidimensional State Space Structure

Toda, M., Komatsuzaki, T.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 153 KB

english, 2005

943

1P156 Optimization of ADP and Pi concentrations during mechanically driven ATP synthesis by F_1-ATPase

DIGAMBARA, PATRA, Itoh, H., Kinosita, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

944

1P165 Young's modulus distributions along sea urchin sperm flagella studied by AFM

Kunioka, Y., Yamaguchi, D., Kamimura, S., Yamada, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

945

1P187 The role of the C-terminal domain of Salmonella hook-capping protein FlgD in flagellar hook assembly

Moriya, N., Minamino, T., Kihara, May, Macnab, Robert, Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

946

1P193 Lateral diffusion of membrane proteins measured using total internal reflection fluorescence correlation spectroscopy

Ohsugi, Y., Tamura, M., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 284 KB

2005

947

1P215 Domain formation in lipid bilayer probed in two-dimensional infrared ultrafast experiment

Volkov, Victor, Chelli, Riccardo, Nuti, Francesca, Papini, Anna Maria, Righini, Roberto

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 216 KB

2005

948

1P249 Role of phosphatidylcholine molecular species in the school recognition in the catfish Plotosus lineatus

Matsumura, K., Matsunaga, S., Fusetani, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 201 KB

2005

949

1SF04 SUMOylation of a DNA repair protein

Shirakawa, M., Baba, D., Maita, N., Saito, H., Uchimura, Y., Sugasawa, K., Hanaoka, F., Tochio, H., Hiroaki, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 219 KB

2005

950

1P274 Analysis of proton transfer during the photocycle and the pump mechanism of Proteorhodopsin

Tamogami, J., Kikukawa, T., Kamo, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

951

1P301 The evolutionary driving force of protein-protein interaction network

Hase, T., Ogishima, S., Nakagawa, S., Tanaka, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 206 KB

2005

952

1P317 Highspeed AFM imaging using FM detection of self-resonating cantilever

Ito, H., Yamashita, H., Kodera, N., Uchihashi, T., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

953

1P332 Immobilization of immunoglobulin molecules via biotinylated protein-G bound to a uniform film of two-dimensional crystal of streptavidin

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

954

1P335 Monitoring of intracellular gene delivery and expression using fluorescence correlation spectroscopy

Sasaki, A., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 300 KB

2005

955

1SB51 3D structures of myosins: a survey of the details and their implication

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 240 KB

2005

956

2P014 Crystal structure of a flavoenzyme TTHA0420 from Thermus thermophilus HB8

Imagawa, T., Sugimoto, Y., Utsunomiya, H., Yokoyama, S., Ebihara, A., Kuramitsu, S., Tsuge, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 251 KB

2005

957

2P064 Post-translational control of the SOD1 maturation and its relevance to ALS

Furukawa, Y., O'Halloran, Thomas

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

958

2P074 The Structual Model for the Amyloid Fibril Formed by β_2-microglobulin Fragment Based on Solid-state NMR

Iwata, K., Fujiwara, T., Matsuki, Y., Akutsu, H., Naiki, H., Goto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

959

2P082 Contribution of Cys106-Cys119 to the intermediate formation of equine beta-lactoglobulin

Nakagawa, K., syokita, A., Goto, K., Kawatsu, M., Ikeguchi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

960

2P110 The trials for visualization of hydrogens in the crystal structure of protein molecule by Maximum Entropy Method

Hirata, K., Fukuyama, K., Tanaka, H., Takata, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

961

2P118 Development and evaluation of multi-dimensional single amino-acid potentials in protein

Yoshida, D., Iwaoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

962

2P128 Structure analysis of DNA mini hairpin using locally enhanced sampling method

Yamasaki, S., Nakamura, S., Terada, T., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

963

2P188 Cooperative binding between myosin mutant G680V and actin

kurogi, R., Ueda, T., Tokuraku, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

964

2P202 Structural changes of possessive myosin motors studied by X-ray solution scattering

Sugimoto, Y., Sato, O., Watanabe, S., Takezawa, Y., Ikebe, M., Wakabayashi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 264 KB

2005

965

2P204 Motile mechanism of Myosin V

Tanaka, Y., Koide, H., Hayakawa, F., Uyeda, T.Q.P., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 264 KB

2005

966

2P238 The changes of energy metabolism during the formation of multicellular structure in Dictyostelium discoideum

Nomura, T., Hidai, C., Nakabayashi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

967

2P244 Effect of pH on structure and phase of DOPS/MO membranes

Okamoto, Y., Yamazaki, M.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 238 KB

english, 2005

968

2P245 Study of raft-model liposome using small-angle neutron scattering and neutron spin echo

Hirai, M., Koizumi, M., Hirai, H., Kasahara, K., Yuyama, K., Suzuki, N., May, Roland, Farago, Bela, Zaccai, Joseph

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

969

2P255 Preparation of thin films using retinoic acid. coumarin and stearic acid and their photo reaction on the inorganic films

Tsujiuchi, Y., Ito, M., Makino, Y., Goto, K., Hatasawa, T., Masumoto, H., Goto, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

970

2P277 Low-temperature FTIR spectroscopy of the D85S mutant of bacteriorhodopsin that pumps chloride ions

Shibata, M., Ihara, K., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

971

2SB04 PAS Domains in Plants' Blue-Light Sensor Phototropin

Iwata, T., Tokutomi, S., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

972

3P009 Improving the Efficiency of Protein-Protein Docking Prediction by Search Space Reduction

Sumikoshi, K., Terada, T., Nakamura, S., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

973

3P022 Structural Analysis of ATP in ATP-TF_1Beta complex by Solid State NMR

Todokoro, Y., Miyasaka, Y., Yagi, H., Kainosho, M., Fujiwara, T., Akutsu, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

974

3P047 The role of the long-range interaction during the folding process of staphylococcal nuclease

K., Shingo, Kamikubo, H., Onitsuka, M., Yamazaki, Y., Imamoto, Y., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

975

3P056 Structure of human α-lactalbumin in the transition state for folding

Nakamura, T., Saeki, K., Kamagata, K., Chaudhuri, Tapan K., Arai, M., Kuwajima, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

976

3P072 An "Artificial selection"-type Evolution Reactor Machine for searching high-affinity molecule from random sequences by In-vitro-virus

Nemoto, N., Biyani, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

977

3P099 Investigation of Conformational Changes of Myoglobin upon Ligand binding by UV Resonance Raman Spectroscopy

Gao, Y., El-Mashtoly, Samir, Pal, Biswajit, Harada, K., Nakagawa, T., Kitagawa, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

978

3P114 pH dependency of absorption spectra of bovine heart cytochrome c oxidase

Nishihara, M., ShinzawaItoh, K., Yoshikawa, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

979

3P153 The activation energy of dielectric relaxation frequency of hyper mobile water in KI solution

MIYAZAKI, T., NISHIDA, M., SUZUKI, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 285 KB

2005

980

3P176 A single head myosin V moves along an actin filament with 5.6 nm steps

Okada, T.okada, Kitamura, K., Tanaka, H., Iwane, A.H., Ikebe, M., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

981

3P197 Expression and Oligomerization of Bacterial Flagellar LP-ring Proteins

Matsunami, H., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

982

3P206 Formation of stress fibers in spreading fibroblasts

Senji, Y., Miyata, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 224 KB

2005

983

3P215 Cytosolic pressure-sensitive RVD and RVI in Paramecium analyzed based on the simulated change in the number of cytosolic osmolytes

Naitoh, Y., Iwamoto, M., Alien, Richard D

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

984

3P224 Measurements of mitochondrial membrane potential and cytosolic Ca^ during M phase

Ohta, Y., Sawai, Y., Murai, K., Funakoshi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

985

3SB54 competition between enegry transfer and charge separation in a photosynthetic reaction center

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

986

3SC52 Adaptive response of gene network to environmental changes by attractorselection

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 227 KB

2005

987

3P265 Acute effect of corticosterone on N-methyl-D-aspartate reseptor-mediated Ca^ elevation in mouse hippocampal slices

Osanai, H., Hori, F., Arakawa, Y., Komatsuzaki, Y., Kawato, S., Saito, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

988

3P281 A unique formation of Chl d from Chl a in the presence of papain

H., Sadamasa, K., Hajime, Y., Takashi, H., Takayuki, S., Yoshihiro, K., Masami

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

989

3P307 Biological time by the nematode C.elegans

Suda, H., Shouyama, T., Ishii, N., Yasuda, K., Yokota, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

990

3P338 Fabrication of aluminium nanoparticles using the ferritin protein

Konishi, T., Kondoh, T., Otsuka, Y., Kaneko, T., Fukano, H., Yoshimura, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

991

3SF53 Changes of membrane lipid organization regulate endocytosis and cell polarization

Tanaka, K., Fujimura-Kamada, K., Yamamoto, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

992

3SF54 Can a Nutrient Transporter Be a Target for Drug Development?

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 198 KB

2005

993

1P025 Conformational fluctuation of hen lysozyme studied by high-pressure ^1H-NMR and fluorescence spectroscopy

Maeno, A., Kamatari, S., Yokoyama, S., Akasaka, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 294 KB

2005

994

1P043 Theoretical calculation of binding free energy and binding mode for Adenosine Deaminase inhibitor

Kosugi, T., Nakanishi, I., Kitaura, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

995

1P050 Interaction between calmodulin and A13+

Ohki, S., Kurita, H., Nakatomi, A., Shimahara, H., Yazawa, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

996

1P052 Specific Interaction of Bovine Lactoferricin with Acidic Phospholipid Bilayers

Umeyama, M., Nishimura, K., Naito, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

997

1P055 Structural change and cell death induction of α-lactalbumin complexed with fatty acid

Akimoto, K., Sato, T., Itabashi, M., Kamiya, M., Aizawa, T., Demura, M., Nitta, K., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

998

1SB06 Organelles dynamics during mitosis in mammalian cells

Kano, F., Murata, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 224 KB

2005

999

1P107 Complex study of activator and inhibitor with (Pro)caspase-3

sugimoto, Y., miyauchi, R., tsuge, H., katsunuma, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

1000

1P112 Effects of Antifreeze glycoprotein (AFGP) molecules for growth kinetics of ice crystals

Furukawa, Y., Zepeda, Salvador, Nakaya, H., Uda, Y., Nomura, K., Yokoyama, E., Matsuura, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

1001

1P113 Single-molecule imaging of cyanobacterial circadian clock proteins

Wada, C., Arai, Y., Hayashi, F., Iwase, R., Uzumaki, T., Iwane, A.H., Yanagida, T., Ishiura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

1002

1P117 Identification of bis-ANS incorporation site in the archaeal group II chaperonin

Iizuka, R., Miyata, Y., Nakayama, H., Dohmae, N., Odaka, M., Yohda, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 245 KB

2005

1003

1P124 Crystal structure of hepatocyte nuclear factor 6alpha complexed with DNA

Iyaguchi, D., Yao, M., Watanabe, N., Nishihira, J., Tanaka, I.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 242 KB

english, 2005

1004

1P137 An establishment and analysis of recombinant wild-type and mutant human actins

Iwasa, M., Sano, KI., Maeda, K., Maeda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

1005

1P138 Characterization of mutant actin expressed in Dictyostelium cells

Kubo, K., Oguchi, Y., Kubota, H., Serizawa, K., Ishiwata, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

1006

1P140 Restoration of low-resolution structure of acto-myosin II subfragment-1 complexes by X-ray fiber diffraction

Iwamoto, H., Oiwa, K., Uyeda, T., Wakayama, J., Tamura, T., Fujisawa, T., Yagi, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

1007

1P145 The Crystal Structure of C-terminal Fragment of Rabbit Skeletal a-Tropomyosin

Nitanai, Y., Maeda, K., Oda, N., Minakata, S., Maeda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

1008

1P164 Weak electrostatic binding that enables Brownian motion of particles along microtubules

Minoura, I., Muto, E.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

1009

1P189 Structural analysis of a ring-like complex of the bacterial flagellum-specific ATPase FliI by electron microscopy

Kazetani, K., Minamino, T., Okabe, M., Katou, T., Namba, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

1010

1P194 Single-molecule tracking of cholesterol monomers and clusters in the cell membrane

Koyama-Honda, I., Sanematsu, F., Ito, K., Shimada, Y., Takeda, Y., Ohno-Iwashita, Y., Kusumi, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 284 KB

2005

1011

1P232 Expression of TRPV2 in the axon of olfactory cells at the period of neurite outgrowth

Matsui, H., Kashiwayanagi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

1012

1P255 Molecular Dynamics Simulation of the Wild-Type and Mutated LOV2 Domains

Nabeno, M., Kamiya, N., Higo, J., Tokutomi, S., Sakurai, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

1013

1P343 Phase electronmicroscopic observation of biological specimens

Usuda, N., Atsuzawa, K., Danev, Radostin, Nagayama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 304 KB

2005

1014

2P032 Microscopic analysis of kinesin-microtubule cmplex under high pressure

Nishiyama, M., Kimura, Y., Nishiyama, Y., Terazima, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

1015

2P117 Direct Observation of Cell adhesion molecule Nanoreaction-field Using Flexible Intermolecular Force Microscopy

Tsukasaki, Y., Kitamura, K., Shimizu, K., Iwane, A.H., Takai, Y., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

1016

2P175 Forced rotation of F_1-ATPase in forward directoin enhances ATP hydrolysis

Nakashima, T., RONDELEZ, Yannick, Tresset, Guillaume, Yamada, Y., Sakakihara, S., Fujita, H., Takeuchi, S., Noji, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 249 KB

2005

1017

2P207 Functional analysis of the slowrunning flagellar motor in Salmonella

mashimo, T., aizawa, S., yamaguchi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

1018

1SE56 Magnetic resonance approach to elucidate the dynamics of protein-protein interaction

Tate, Shin-ichi

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 198 KB

2005

1019

2P249 Correlation between lipid composition of cell-sized liposome and its volume of internal/lipid membrane

Obinata, K., Sato, K., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 239 KB

2005

1020

2P265 Exploring a voltage sensor of MscS, a mechanosensitive channel of E. coli

Nomura, T., Yoshimura, K., Sokabe, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

1021

3P002 Structure Prediction of Membrane Proteins by the Fragment Assembly Method

Jin, W., Miki, T., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

1022

2SC04 Aggregation of Alzheimer's Amyloid beta-Protein via Ganglioside Cluster

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

1023

3P042 Protein folding monitored by slow motion

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

1024

3P065 Helix formation in apomyoglobin folding revealed by submillisecond H/D exchange & NMR

Uzawa, T., Nishimura, C., Akiyama, S., Ishimori, K., Takahashi, S., Dyson, Jane, Wright, Peter

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 280 KB

2005

1025

3P116 Structural Fundamentals for Monoamine Oxidase A Inhibition Control Revealed by Molecular Dynamics Simulations

Apostolov, Rossen, Yonezawa, Yasushige, Takano, Yu, Nakamura, Haruki

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

1026

3P155 Development of the methods for isolation, cultivation and control of differentiation of mouse embryonic cardiac stem cell

Kawasaki, A., Kojima, K., Kaneko, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 285 KB

2005

1027

3P159 Springiness caused by twisting and a stretch of neural progenitors' processes may help migration of process-inheriting daughter neurons

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

1028

3P166 A mechanism for the ATPase activity of F_1-ATPase that lacks non catalytic sites

Shimo-Kon, R., Muneyuki, E., Sakaki, N., Adachi, K., Fruike, S., Sakai, H., Yoshida, M., Kinosita, K. Jr.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

1029

3P171 Approach to the mechanical principle of myosin motors using coarse-grained models

Tatsumi, R., Koga, N., Takada, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 236 KB

2005

1030

3P213 Characterization of calcium response of cultured bovine ciliary muscle cells to muscarinic stimulation

Miyazu, M., Ohinata, H., Takai, Y., Takai, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

1031

Uniform-sized Giant Liposomes using Parylene Patterning Method

Kuribayashi, K., Takeuchi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

1032

Preparation of model biological membrane on a substrate by photo polymerization of phospholipid bilayer

Kiritoshi, Y., Morigaki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

1033

Effect of lateral pressure on the interaction between melittin and lipids in membranes

Kodama, A., Ohba, T., Ohki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

1034

3P309 Analyzing the roles of phenotypic diversity produced under a uniform condition in determining new phenotypes at environemntal changes

Wakamoto, Y., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

1035

3P329 Immobilization of ribosomes on surface and SPR monitoring of protein biosynthesis

Matsuura, T., Tanaka, H., Matsumoto, T., Kawai, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

1036

3P351 A theoretical analysis and applications of an autonomous DNA/RNA-based computation element

Takinoue, M., Kiga, D., Suyama, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 209 KB

2005

1037

1P013 The role of water molecules investigated from the low frequency modes of peptides and proteins

Yamaguchi, M., Yamamoto, K., Tani, M., Hangyo, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 259 KB

2005

1038

1P061 Molecular dynamics simulation of amyloid forming by Generalized Born energy

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

1039

1P069 Relation between Entropically Driven Aggregation of Biomacromolecules and Solvation Structure

Karino, Y., Akiyama, R., Kinoshita, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

1040

1SC02 Correlated neuronal activity in the hippocampus in vivo

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 224 KB

2005

1041

1P074 What are the necessary and sufficient conditions for a protein to be foldable? Understanding from the folding elements

Arai, M., Iwakura, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

1042

1P091 Analysis of the folding pathways of ribonulease A by using selenium reagents with high oxidizing ability

Yoneda, M., Henmi, K., Iwaoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

1043

1P224 Stable analogs for phosphoenzyme intermediates of sarcoplasmic reticulum Ca-ATPase

Danko, S., Yamasaki, K., Daiho, T., Suzuki, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

1044

1P231 Effect of cholesterol on structure and dynamics of PLC-deltal PH domain at membrane surface by solid state NMR

Hatakeyama, A., Sugita, T., Okada, M., Yagisawa, H., Tuzi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

1045

1P265 Glycerin effect on the photochemical reaction of pharaonis phoborhodopsin

Iwasa, T., Yakura, Y., Kamo, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

1046

1SD54 Neural mechanisms of time perception in monkey brain

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

1047

2P298 Analysis of structure and light sensing mechanism of PixD in thermophilic cyanobacterium Thermosynechococcus elongatus BP-1

Okajima, K., Kita, A., Fukushima, Y., Ochiai, Y., Shibata, Y., Katayama, M., Morimoto, Y., Itoh, S., Miki, K., Ikeuchi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

1048

2SD06 Mechanical Interaction between Cell and Extracellular Matrices as Elastic Substrate

Harada, I., Akaike, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

1049

2P069 Toward a Systematic Method for Enhancing Protein Solubility

Kato, A., Soda, K., Kuroda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

1050

2P194 Single molecule observation of ATP hydrolysis of Myosin V

Komori, T., Nishikawa, S., Ariga, T., Iwane, A.H., Yamakawa, H., Ohara, O., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

1051

2P199 Intermolecular cross-linking of rice kinesin by photo reactive ATP analogue

Koike, Y., Umeki, N., Umezu, N., Mitsui, T., Maruta, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

1052

2P232 Mechanical cycle of Mycoplasma mobile gliding motility

Uenoyama, A., Seto, S., Mizutani, K.Q.T., Nishizaka, T., Miyata, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 266 KB

2005

1053

3P097 Contribution of the heme-PAS domain of NPAS2 to DNA binding activity

Ishida, M., Uchida, T., Kitagawa, T., Sagami, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

1054

3P293 Survival Study Using Chinese Hamster V79 Cells Irradiated with Synchrotron X-ray Microbeam

Maeda, M., Usami, N., Kobayashi, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

1055

3P296 Prebiotic Oligomarization of Amino acids under the Nonequilibrium Hydrothermal Conditions

Imai, E., Honda, H., Matsuno, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

1056

1SC01 State-Dependent Gating of Sensory Signals in Olfactory Cortex

Murakami, M., Kashiwadani, H., Kirino, Y., Mori, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 224 KB

2005

1057

1SC03 Stimulus dependent modulation of synchronous activities of neurons in area TE of anesthetized macaque monkeys

Uchida, G, Fukuda, M, Sato, T, Tanifuji, M

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 218 KB

2005

1058

1P127 Construction of measurement system for single-molecule dynamics of translation

Nakayama, H., Shimamoto, N., Ito, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

1059

3P130 X-ray crystallographic study of archaerhodopsin-2 at 2.5Å resolution

Yoshimura, K., Enami, N., Ihara, K., Kouyama, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

1060

3P220 Transport mechanism of secretory granules and structural characteristics of secretion site in stimulussecretion coupling of mast cell

Hirashima, N., Nakanishi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

1061

2P003 Protein expression of repetitive structure having Zn finger motif and the secondary structure analysis

Yoshimura, T., CHO, LAY SINT, Ohuchi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 279 KB

2005

1062

2P076 Effects of surface interaction on the Aβ(1-40) amyloid fibril formation and growth

Ban, T., Morigaki, K., Naiki, H., Goto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

1063

2P141 Kinetics of +1 Ribosomal Frameshifthing

Matsuura, T., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 233 KB

2005

1064

3P046 Structural analysis of amyloid fibrils ofβ2-microglobulin using tryptophan fluorescence probe

Kihara, M., Yamamoto, K., Iwata, K., Chatani, E., Hasegawa, K., Naiki, H., Goto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

1065

1P033 Functional Role of Hydrogen Bonding at the Remote Site His6 in the Electron Transfer Reaction of Pseudoazurin

Aono, T., Uchida, Y., Ijima, H., Kohzuma, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

1066

1P102 The analysis of protein functions in live cell by multipoint FCCS measurement

Takahashi, Y., Sawada, R., Saito, K., Kinjo, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

1067

1P154 Inhibitory effeet of TBT-Cl on V-ATPase activity

Takeda, M., Imamura, H., Yoshida, M., Yokoyama, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

1068

1P299 On a role of mutual repression for Feedforward loop, enlarge Hill coefficient without change of threshold value

Ishihara, S., Shibata, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

1069

1P322 Dynamic behavior of dynein c captured by high-speed AFM

Miyagi, A., Kodera, N., Sakakibara, H., Oiwa, K., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 267 KB

2005

1070

2P029 Structural state transitions of actin studied by molecular dynamics simulation

Hayashida, T., Takano, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

1071

2P030 Employment of fluorescence detected circular dichroism for excimer fluorescence : Domains twist of actin induced by ATP

Ikkai, T., Shimada, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

1072

1SB55 Role of microtubule in kinesin motility studied by mutational analysis of tubulin

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

1073

2P149 Functional analysis of NH_2- and COOH- terminal regions of Akazara scallop troponin-T

Suzuki, H., Tanaka, H., Ohtsuki, I., Ojima, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

1074

2P153 Site-directed spin-labeling EPR study of the structural transition of human cardiac troponin C

Ueki, S., Nakamura, M., Arata, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

1075

2P167 Evidence against essential roles of SD-1 of actin in actomyosin motility

Suzuki, M., Siddique, Md.S.P., Miyazaki, T., Katayama, E., Uyeda, T.Q.P.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

1076

2P220 A photochemical cleavage on actin lose both polimerizability and inhibitory action for DNase1

Hayashi, K., Okamoto, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 275 KB

2005

1077

2P224 Constructional research for the morphogenetic dynamics of topographically controlled cells by using hydrogel microfabrication method

Moriguchi, H., Kaneko, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

1078

2P254 How does alkyl chain elongation effect on physicochemical properties of cyclic lipid membrane?

Nakamura, M., Shibakami, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

1079

2P256 Development of an observation system of the formation of a bilayer lipid membrane by using a water immersion objective

Fujiwara, H., Ishiwata, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

1080

2P270 Temperature-dependent interaction changes between pharaonis phoborhodopsin and its transducer protein, pHtrII, by FTIR spectroscopy

Kamada, K., Furutani, Y., Sudo, Y., Shimono, K., Kamo, N., Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

1081

2P279 FTIR study of dark-adapted bacteriorhodopsin

Mizuide, N., Shibata, M., Mordechai, Sheves, Kandori, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 246 KB

2005

1082

2P307 Analysis of nuclear localization signal focusing on physicochemical property

Sakiyama, N., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

1083

2SB03 PAS domain in two-component regulatory system

Yamada, S., Nakamura, H., Shiro, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 238 KB

2005

1084

3P006 Fast Fitting Calculation of Low Resolution Protein Structures using Gaussian Mixture Model

Kawabata, T., Yuta, K., Go, N.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 235 KB

2005

1085

3P010 Prediction of protein-protein interaction using Evolutionary Trace method and molecular surface shape complementarities

Kanamori, E., Kinoshita, K., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 274 KB

2005

1086

3P015 Structural and molecular study of Glu-tRNA^ amidotransferase

Nakamura, A., Sakai, N., Yao, M., Tanaka, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 240 KB

2005

1087

3P016 Improvement of resolution of cytochrome c oxidase crystal using annealing method

Suga, M., Ito-Shinzawa, K., Aoyama, H., Yamashita, E., Yoshikawa, S., Tsukihara, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 240 KB

2005

1088

3P017 Structural study of the electron transfer complex between plant-type Ferredoxin and Sulfite reductase

Kurisu, G., Nakayama, M., Toyoda, H., Kusunoki, M., Hase, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 284 KB

2005

1089

3P019 Approches to High Resolution Strucural Analysis of Rice Dwarf Virus by X-ray Crystallography

Higashiura, A., Miyazaki, N., Hagiwara, K., Omura, T., Tukihara, T., Nakagawa, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 284 KB

2005

1090

3P051 Heat-induced aggregation of apoconcanavalin A observed by fluorescence probes

Kudou, M., Shiraki, K., Takagi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 285 KB

2005

1091

3P063 Trials of getting the information on protein dynamics from the Non-Gaussian behavior on the Elastic Incoherent Neutron Scattering profile

Tokuhisa, A., Joti, Y., Kamikubo, H., Nakagawa, H., Kitao, A., Kataoka, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 257 KB

2005

1092

2SC05 Characterization of the GM3 cluster by using model liposome

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

1093

3P187 Binding analysis between MAP4 isoforms and kinesin

Nishie, M., Noguchi, T., Matsusima, K., Kotani, S., Tokuraku, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 270 KB

2005

1094

3P203 Cell movement within 3-dimensional tissues

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

1095

3P209 The binding mechanism of CapZ to actin filament

Takedea, S., Narita, A., Morii, H., Maeda, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

1096

3P212 A cell culture condition which prevents anoikis of anchorage dependent cells

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 258 KB

2005

1097

Imaging of membrane fluidity change in PC12D cells during apoptosis

Nishida, K., Ohki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

1098

3P261 Analysis of central mechanisms of olfactory learning and discrimination

Watanabe, S., Kirino, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 253 KB

2005

1099

3P270 The effects of estradiol and endocrine disrupter on the rat hippocampus : Multielectrode dish analysis

Ogiue-Ikeda, M., Takada, N., Kawato, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

1100

3P276 Decay mechanism of the chlorophyll triplet state in the presence of QA- in photosystem II

Mukai, K., Saito, K., Sumi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

1101

3P288 Ultrafast excitation relaxation dynamics of the carotenoid isolated from green alga

Murai, Y., Yokono, M., Akimoto, S., Yamazaki, I., Murakami, A., Higuchi, M., Mimuro, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

1102

3P302 New activities of GADV comolexes from hydrothermal conditions onto genes and proteins

Shibata, H., Nemoto, A., Honda, H., Imai, E., Honda, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

1103

3SD52 Protein dynamics studied by neutron incoherent scattering

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 186 KB

2005

1104

3SD53 Studies on Biomolecular Dynamics with Terahertz Time-Domain Spectroscopy

Yamamoto, K., Yamaguchi, M., Tani, M., Hangyo, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 223 KB

2005

1105

3SF56 Molecular imaging: Optical approach for functional genomics

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 198 KB

2005

1106

1P001 Cancer-related Mutations in BRCA1-BRCT Cause Structural Changes in Protein-Protein Binding Sites : A Molecular Dynamics Study

Gough, Craig, Gojobori, T., Imanishi, T.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 248 KB

english, 2005

1107

1P003 An analysis of conformational change of a protein upon binding to ligand by multicanonical MD

Terada, T., Shimizu, K.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 248 KB

english, 2005

1108

1P021 Solution structure and dynamics of Ufm1, a ubiquitin-fold modifier

Sasakawa, H., Sakata, E., Yamaguchi, Y., Komatsu, K., Tanaka, K., Kato, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

1109

1P028 Crystal Structure of Human T-protein of Glycine Cleavage System

Okamura-Ikeda, K., Hosaka, H., Yoshimura, M., Yamashita, E., Toma, S., Nakagawa, A., Fujiwara, K., Motokawa, Y., Taniguchi, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 294 KB

2005

1110

1SB04 A study of cell surface movements and the role of actin cytoskeleton

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

1111

1SB05 Measurements of membrane potential and volume changes of single organelle

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 260 KB

2005

1112

1P051 Protein-protein interaction between calmodulin and glutamic acid decarboxylase

Otosu, T., Matsumoto, T., Nishimoto, E., Yamashita, S., Yamaura, I.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 273 KB

2005

1113

1P056 Overexpression and structure of canine milk lysozyme mutant in Pichia pastoris

Akieda, D., Yasui, M., Nonaka, Y., Shimamoto, S., Nodumi, T., Aizawa, T., Demura, M., Nitta, K., Kawano, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

1114

1SC04 Macroscopic bi-stability in inferior temporal cortex and spike variability

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 218 KB

2005

1115

1P128 Kinetic analysis of Holliday junction branch migration mediated by RuvA-RuvB

Han, Y.-W., Tani, T., Hayashi, M., Yokota, H., Hishida, T., Iwasaki, H., Shinagawa, H., Harada, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

1116

1P136 DSC measurements of tropomyosin mutants and the complex with F-actin and troponin

Onoue, A., Kusakabe, T., Miki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

1117

1P141 The Environment around the Actin filament in Actomyosin

Shimazaki, Y., Honda, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 254 KB

2005

1118

1P160 A diffusional process in an ATP-induced conformational change of myosin

Iwai, S., Sutoh, K., Chaen, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 247 KB

2005

1119

1P167 Evaluation of mechanical properties of Chlamydomonas inner-arm dynein subspecies f by using in vitro motility assay(2)

Kotani, N., Sakai, Y., Kojima, H., Oiwa, K., Sakakibara, H.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 243 KB

2005

1120

1P180 Biased diffusional motion of cargo bound single-headed myosin-VI observed in high viscous solution

Iwaki, M., Ikebe, M., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 255 KB

2005

1121

1P223 Thermal division of cationic liposome adhering double-stranded DNA on inner layer of the membrane

Shohda, K., Takakura, K., Suzuki, K., Toyota, T., Kageyama, Y., Maru, N., Sugawara, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

1122

1P227 A device of lipid bilayer formation for membrane transport imaging

Funakoshi, K., Suzuki, H., Takeuchi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 265 KB

2005

1123

1P230 Solid state NMR study of inhibition mechanism of PLC by U73122

Nakano, M., Okada, M., Yagisawa, H., Tuzi, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

1124

1P245 Bisphenol-A acutely induces morphological changes of dendritic spine structure in rat hippocampal CA1 pyramidal neurons

Tanabe, N., Tsurugizawa, T., Komatsuzaki, Y., Mitsuhashi, K., Ogiue-Ikeda, M., Kimoto, T., Kawato, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

1125

1P286 Classification of physicochemical interactions between dumbbell-type proteins and their target proteins

Uchikoga, N., Mitaku, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 250 KB

2005

1126

1SF08 Solid-state NMR analysis of membrane peptide and protein structures in signal transduction systems

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

1127

1P320 Distance control in high-speed AFM by direct actuation of the cantilever using laser-induced photo-thermal expansion

Yamashita, H., Kodera, N., Miyagi, A., Ito, H., Uchihasi, T., Ando, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

1128

1P339 Visualization of intramitochondrial magnesium concentration

Shindo, Y., Kubota, T., Komatsu, H., Hotta, K., Suzuki, K., Ogawa, H., Oka, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 278 KB

2005

1129

2P006 Analysis of Protein Surface Structure by Level Set Method

Kubota, Y., Nakamura, T., Okano, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 244 KB

2005

1130

2P020 Crystal Structure of the NAD(H) dependent redox sensing represser p25 from Thermus Thermophilus HB8

Sosa, A., Nakamura, A., Komori, H., Kita, A., Miki, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 277 KB

2005

1131

2P084 Crystallographic Analysis of Collagen-Like Triple Helical Structure of (4(R)-Hyp-4(R)-Hyp-Gly)_

Kawahara, K., Nishi, Y., Nakamura, S., Uchiyama, S., Nishiuchi, Y., Nakazawa, T., Ohkubo, T., Kobayashi, Y.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

1132

2P181 Schizosaccharomyces pombe kinesin-related protein Pkl1 is a minusend directed motor

Furuta, K., Maeda, Y., Edamatsu, M., Takahashi, Y., Toyoshima, YY.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 242 KB

2005

1133

2P328 Cross talk free Fluorescence Cross Correlation Spectroscopy using switching method

Nishimura, J., Sugiyama, T., Takahashi, Y., Knjo, M., Miyawaki, A.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 290 KB

2005

1134

3P068 A novel method for preparing rabbit antibody using yeast display system

Nakagawa, M., Azuma, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 280 KB

2005

1135

3P070 Time-resolved Cellular Imaging Using Novel Zinc Responsive Porobe

Kikuchi, K., Hanaoka, K., Nagano, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 256 KB

2005

1136

3P110 Strategies for collecting high resolution data of bovine heart cytochrome c oxidase

Aoyama, H., Yamashita, E., Shinzawa-Itoh, K., Yoshikawa, S., Tsukihara, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 234 KB

2005

1137

3P133 Electronic and solvation structure of molecule in aqueous solution

Sato, H., Sakaki, S.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 211 KB

2005

1138

3P158 The relation between the expression of NeuroD2 and the differentiation into neuron in embryonic stem cells

Sugimoto, Y., Furuno, T., Nakanishi, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 268 KB

2005

1139

3P174 Identification of the single specific-IQ motif responsible for Ca^-induced dissociation of calmodulin in myosin V

Koide, H., Tanaka, Y., Hayakawa, F., Gabriele, Meyer zu Horste, Ando, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 248 KB

2005

1140

2SE05 Analysis of novel functions of cleaved fragments from type l transmembrane proteins

Nakaya, T., Suzuki, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 241 KB

2005

1141

3P299 In vitro evolution of a random polypeptide toward acquiring phage infectivity into E.coli host cells

Hayashi, Y., Aita, T., Toyoda, H., Urabe, I., Yomo, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 296 KB

2005

1142

3P310 Investigation of Chlamydomonas cell cycle control systems

Matsumura, K., Yagi, T., Yasuda, K.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 269 KB

2005

1143

1P004 Brownian dynamics simulation on HERG ion-channel permeation

Kamiya, N., Yonezawa, Y., Nakamura, H.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 248 KB

english, 2005

1144

1P098 Database analysis of correlation between protein temperature factor and structural change on substrate binding

Ikehata, A., Kidera, A., Ikeguchi, M.

Journal:

Seibutsu Butsuri

Year:

2005

Language:

english

File:

PDF, 193 KB

english, 2005

1145

1P105 Novel modulation mechanism of calmodulin : modulation of nrotein 4.1R binding to membrane proteins by calmodulin

Nunomura, Wataru, Takakuwa, Yuichi

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 261 KB

2005

1146

1P132 New Ca regulation mechanism of invertebrate (Hokki clam) muscle conraction

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 226 KB

2005

1147

1P146 Placing Troponin on Tropomyosin by using FRET Data

Kimura, C., Ueno, Y., Uewasa, K., Wakabayashi, K., Miki, M.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 263 KB

2005

1148

1P158 Calculation of potential of mean force between two actin moleculesat Arp2/3 arrangement through excluded volume effect

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 247 KB

2005

1149

1P176 Micro-patterning of biomolecular motors by MEMS technology

Yoshida, Y., Takeuchi, S., Nishizaka, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 252 KB

2005

1150

1P214 Effects of myosin-ATPase inhibitor on self-oscillatory properties of embryonic cardiac muscle cells

Aoyama, Shoichiro, Suzuki, Madoka, Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 216 KB

2005

1151

2P027 Approach to electron microscopic observation of interaction of actomyosin with leading boundmagnetic beads

Fujioka, H., Kashiwagi, Y., Yasunaga, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 272 KB

2005

1152

3P254 Emergent perception cognitive temperature, and spontaneous activity of the brain

Murata, T., Yanagida, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 271 KB

2005

1153

10.2142/biophys.45.s300_2

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 95 KB

2005

1154

1P042 Entropy penalty in dextran-binding of glucosyltransferase

Komatsu, H., Kodama, T.

Journal:

Seibutsu Butsuri

Year:

2005

File:

PDF, 237 KB

2005

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