Volume 52; Issue supplement

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Seibutsu Butsuri
Volume 52; Issue supplement

Seibutsu Butsuri

Volume 52; Issue supplement

1

2PT164 Norcamphor binding to cytochrome P450cam with a mutation to block pathway for the active site waters excluded by substrate(The 50th Annual Meeting of the Biophysical Society of Japan)

Kitamura, Natsumi, Amano, Aya, Kishimoto, Ayaka, Sakurai, Keisuke, Takagi, Kenji, Mizushima, Tsunehiro, Hayashi, Takashi, Shimada, Hideo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

2

2PT181 Physiological role and molecular properties of proteorhodopsin from marine bacterium(The 50th Annual Meeting of the Biophysical Society of Japan)

Abe-Yoshizumi, Rei, Inoue, Keiichi, Yoshizawa, Susumu, Kogure, Kazuhiro, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

3

3PT231 Mechanism of NH_4^+ inhibition in the S-state cycle of photosynthetic oxygen evolution(The 50th Annual Meeting of the Biophysical Society of Japan)

Kobayashi, Takashi, Noguchi, Takumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

4

10.2142/biophys.52._s22_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 15 KB

2012

5

10.2142/biophys.52._s23_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 61 KB

2012

6

10.2142/biophys.52._s25_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 271 KB

2012

7

10.2142/biophys.52._s28_

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 2.39 MB

english, 2012

8

10.2142/biophys.52._s2_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 109 KB

2012

9

10.2142/biophys.52._s41_

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 3.66 MB

english, 2012

10

10.2142/biophys.52.app2

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 58 KB

2012

11

10.2142/biophys.52.app4

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 58 KB

2012

12

10.2142/biophys.52.app5

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 130 KB

2012

13

Universal statistical laws in replicating cellular dynamics(The 1st Award Seminar for outstanding BIOPHYSICS paper,The 50th Annual Meeting of the Biophysical Society of Japan)

Furusawa, Chikara

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 84 KB

english, 2012

14

1PT181 Free energy decomposition and functional sites of proteins(The 50th Annual Meeting of the Biophysical Society of Japan)

Saito, Mami, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

15

1PT182 Measurement of the local viscosity of the hydration shell around protein by time-resolved fluorescence anisotropy spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Wazawa, Tetsuichi, Mogami, George, Morimoto, Nobuyuki, Ishida, Noriyoshi, Suzuki, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

16

1PT183 Highly accurate statistical pickup method for single particle 3D analysis using electron microscope(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawata, Masaaki, Sato, Chikara

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

17

1PT184 Single Particle Reconstruction with Medium Tilt Images by Electron Microscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Ueno, Yutaka, Kobayashi, Emiko, Mine, Shouhei, Kawasaki, Kazunori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

18

1PT185 Development of atomic modelling tool for Electron Microscopy, applying steered Molecular Dynamics method(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamashita, Risa, Nakao, Ryota, Sakamoto, Hiroshi, Yasunaga, Takuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

19

1PT187 Gibbs energies of secondary structures for α-Chymotrypsinogen A investigated by FT-IR spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Murayama, Koichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

20

1PT188 Improvement of sampling efficiency through combined use of molecular dynamics simulations with implicit and explicit solvent models(The 50th Annual Meeting of the Biophysical Society of Japan)

Kondo, Hiroko, Okimoto, Noriaki, Taiji, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

21

1PT189 Time-series analysis of molecular dynamics: Conformational change and dynamics of collective behavior(The 50th Annual Meeting of the Biophysical Society of Japan)

Fuji, Kana, Sekijima, Masakazu, Fujisaki, Hiroshi, Toda, Mikito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

22

1PT190 Characterization of histone multimers in the gas phase by ion mobility mass spectrometry and molecular dynamics simulation(The 50th Annual Meeting of the Biophysical Society of Japan)

Saikusa, Kazumi, Fuchigami, Sotaro, Takahashi, Kyohei, Asano, Yuuki, Nagadoi, Aritaka, Tachiwana, Hiroaki, Kurumizaka, Hitoshi, Ikeguchi, Mitsunori, Nishimura, Yoshifumi, Akashi, Satoko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

23

1PT201 Protein stability and dynamics under cellular environments(The 50th Annual Meeting of the Biophysical Society of Japan)

Harada, Ryuhei, Sugita, Yuji, Feig, Michael

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

24

1PT202 Effects of the cell-cell communication on the populational variability of mRNA levels among clonal macrophages after LPS stimulation(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamagishi, Mai, Shirasaki, Yoshitaka, Shimura, Nanako, Suzuki, Nobutake, Ohara, Osamu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

25

1PT203 ATP-releases with various stimuli in subepithelial fibroblasts in intestinal villi(The 50th Annual Meeting of the Biophysical Society of Japan)

Furuya, Kishio, Furuya, Sonoko, Sokabe, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

26

1PT204 An optimal heterogeneity in a cell population maximizes the effects of growth factors directing stochastic PC12 cell fate decisions(The 50th Annual Meeting of the Biophysical Society of Japan)

Mouri, Kazunari, Sako, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 398 KB

english, 2012

27

1PT207 Duration of CaMKII activation required for plasticity of dendritic spines revealed by photo-activatable CaMKII inhibitor(The 50th Annual Meeting of the Biophysical Society of Japan)

Murakoshi, Hideji, Yasuda, Ryohei

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

28

1PT208 Positive feedback control of thrombopoietin signaling by stabilization of its receptor dimers revealed through single-molecule imaging(The 50th Annual Meeting of the Biophysical Society of Japan)

Sakamoto, Akihiko, Kato, Takashi, Funatsu, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

29

1PT209 Rac1 recruitment to the archipelago structure of focal adhesion through the fluid membrane as revealed by single-molecule analysis(The 50th Annual Meeting of the Biophysical Society of Japan)

Shibata, Akihiro, Limin, Chen, Nagai, Rie, Ishidate, Fumiyoshi, Miwa, Yoshihiro, Naruse, Keiji, Fujiwara, Takahiro, Kusumi, Akihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

30

1PT211 Simultaneous investigation of intracellular calcium concentration and mechanical stimuli to mouse blastocysts(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsuura, Koji, Asano, Yuka, Sugimoto, Ikuyo, Kodama, Mieko, Naruse, Keiji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

31

1PT212 Effect of Bisecting GlcNAc and Core Fucosylation on Conformational Properties of Biantennary Complex-Type N-Glycans in Solution(The 50th Annual Meeting of the Biophysical Society of Japan)

Nishima, Wataru, Miyashita, Naoyuki, Yamaguchi, Yoshiki, Sugita, Yuji, Suyong, Re

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

32

1PT217 Mean field theory of epigenetic dynamics of cell differentiation(The 50th Annual Meeting of the Biophysical Society of Japan)

Koshii, Takaya, Terada, Tomoki P., Sasai, Masaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

33

1PT218 A dynamical system modeling of cell differentiation for understanding of robust development and cell reprogramming(The 50th Annual Meeting of the Biophysical Society of Japan)

Furusawa, Chikara, Kaneko, Kunihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

34

1PT219 Simulations of large deformation during tissue morphogenesis using reversible network reconnection model(The 50th Annual Meeting of the Biophysical Society of Japan)

Okuda, Satoru, Inoue, Yasuhiro, Eiraku, Mototsugu, Sasai, Yoshiki, Adachi, Taiji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

35

1PT220 Development of Three-dimensional reconstruction brain circuit controlling the direction of neurite elongation and cell body position(The 50th Annual Meeting of the Biophysical Society of Japan)

Odawara, Aoi, Suzuki, Ikuro, Gotoh, Masao

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 398 KB

english, 2012

36

1PT221 Decellularized conditions of neuronal tissue for the reconstruction of 3D neuronal network(The 50th Annual Meeting of the Biophysical Society of Japan)

Amano, Shota, Suzuki, Ikuro, Gotoh, Masao

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

37

1PT222 Construction of a microfluidic system for fluorescence-based single-molecule sorting(The 50th Annual Meeting of the Biophysical Society of Japan)

Saitoh, Sho, Oikawa, Hiroyuki, Kamagata, Kiyoto, Takahashi, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

38

1PT223 Development of a convenient tool for making processes of particle clustering and averaging in 3D reconstruction from electron micrographs(The 50th Annual Meeting of the Biophysical Society of Japan)

Kihara, Tatsuya, Yasunaga, Takuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

39

1PT225 Tube Formation of Endothelial Cells in the Hydrogel Microfiber(The 50th Annual Meeting of the Biophysical Society of Japan)

Onoe, Hiroaki, Takeuchi, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

40

1PT229 Building and torque measurement of bacteria driven micro gear(The 50th Annual Meeting of the Biophysical Society of Japan)

Kojima, Masaru, Miyamoto, Tatsuya, Nakajima, Masahiro, Homma, Michio, Fukuda, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

41

1PT231 Mechanical control of 3-D cell movement in elasticallymicropatterned matrix of micro-fiber gels(The 50th Annual Meeting of the Biophysical Society of Japan)

Ogata, Aya, Kidoaki, Satoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 396 KB

english, 2012

42

1PT233 Selective Injection of Fluorescent Nanobeads into Caenorhabditis elegans(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakajima, Masahiro, Tajima, Hirotaka, Kojima, Masaru, Nakanishi, Naoya, Hisamoto, Naoki, Homma, Michio, Fukuda, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

43

1PT235 Development of a flow-type lactate biosensor and its application to the measurement of lactate in the mouse brain(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamazaki, Kaoru, Ichikawa, Mai, Shimazaki, Ryo, Mukai, Hideo, Saito, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

44

1PT236 Monitoring the single-molecule enzymatic activity of β-glucosidase in a microchamber array chip(The 50th Annual Meeting of the Biophysical Society of Japan)

Tahara, Kentaro, Iizuka, Ryo, Ono, Takao, Igarashi, Kiyohiko, Samejima, Masahiro, Ichiki, Takanori, Funatsu, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 304 KB

english, 2012

45

1PT237 Synthesis of rear earth (Eu, Tb, Tm and Y) nanoparticles in apoferritin cavity(The 50th Annual Meeting of the Biophysical Society of Japan)

Harada, Tomoaki, Yoshimura, Hideyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 119 KB

english, 2012

46

1PT238 Synthesis of gadolinium-based nanoparticles using the protein cage of apoferritin(The 50th Annual Meeting of the Biophysical Society of Japan)

Fukano, Hiroko, Yoshimura, Hideyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 119 KB

english, 2012

47

2SB-03 Direct observation of structural dynamics of biological molecules by high-speed atomic force microscopy(2SB Symposium organized by younger generation: Young scientists pioneering future life sciences,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kodera, Noriyuki, Uchihashi, Takayuki, Ando, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

48

2SB-04 Cracking the mystery of nine-ness : mechanisms of centriole formation(2SB Symposium organized by younger generation: Young scientists pioneering future life sciences,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kitagawa, Daiju

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

49

2SB-05 Recent advances in CryoEM high-resolution structural analysis for helical filaments(2SB Symposium organized by younger generation: Young scientists pioneering future life sciences,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

50

2SB-06 Kinetic and X-ray crystallographic studies of assembly/disassembly of the CRM1 nuclear export complex(2SB Symposium organized by younger generation: Young scientists pioneering future life sciences,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Koyama, Masako, Shirai, Natsuki, Matsuura, Yoshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 398 KB

english, 2012

51

2PS003 Simultaneous observation of the rotation of flagellar motor and GFP-labeled stator unit in a functioning flagellar motor(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakajima, Mizuki, Fukuoka, Hajime, Inoue, Yuichi, Takahashi, Hiroto, Ishijima, Akihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

52

2PS004 Imaging of fluorescently-tagged motor components of bacterial flagella(The 50th Annual Meeting of the Biophysical Society of Japan)

Sowa, Yoshiyuki, Che, Yong-Suk

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

53

2PS005 Structural and functional analyses of a periplasm region of FliP, a component of the flagellar protein export apparatus(The 50th Annual Meeting of the Biophysical Society of Japan)

Fukumura, Takuma, Furukawa, Yukio, Saijo-Hamano, Yumiko, Imada, Katsumi, Namba, Keiichi, Minamino, Tohru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

54

2PS008 Controlling Bacterial Flagellar Motor Rotation by Optical Spanner(The 50th Annual Meeting of the Biophysical Society of Japan)

Lin, Tsai-Shun, Lo, Chien-Jung

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

55

2PS009 Insights into myosin V stepping mechanism using point mutations in the converter(The 50th Annual Meeting of the Biophysical Society of Japan)

Mikhailenko, Sergey V., Ohki, Takashi, Yoshimoto, Jun-ichi, Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

56

2PS011 Relation between myosin VI's dual functionality and its lever arm structures(The 50th Annual Meeting of the Biophysical Society of Japan)

Ikezaki, Keigo, Komori, Tomotaka, Yanagida, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

57

2PS013 Measurement of ADP release from bipolar myosin filament track along which actin filament slides(The 50th Annual Meeting of the Biophysical Society of Japan)

Maruta, Takahiro, Okubo, Hiroyuki, Kobatake, Takahiro, Chaen, Shigeru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

58

2PS015 Molecular dynamics simulation for the swinging lever-arm motion of a myosin molecular motor(The 50th Annual Meeting of the Biophysical Society of Japan)

Masuda, Tadashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

59

2PS017 Contribution of the conformational change of myosin II in the coupled sliding and binding process of the force-generation(The 50th Annual Meeting of the Biophysical Society of Japan)

Nie, Qing-Miao, Sasai, Masaki, Tereda, Tomoki P.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 396 KB

english, 2012

60

2PS021 Identification of leg and crank proteins of Mycoplasma mobile on gliding machinery by electron microscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Hiroki, Miyata, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

61

2PS027 Gene manipulation of gliding bacterium, Mycoplasma mobile(The 50th Annual Meeting of the Biophysical Society of Japan)

Tulum, Isil, Uenoyama, Atsuko, Miyata, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

62

2PS031 The role of the flagellar C ring in hook-length control by FliK(The 50th Annual Meeting of the Biophysical Society of Japan)

Uchida, Kaoru, Yamasaki, Tatsuya, Aizawa, Shin-Ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

63

2PS036 Measurement of contractile properties of stress fibers isolated from vascular smooth muscle cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsui, Tsubasa S., Komatsu, Daiki, Sato, Masaaki, Deguchi, Shinji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

64

2PS037 IQGAP confines myosin-II to the cytokinetic contractile ring(The 50th Annual Meeting of the Biophysical Society of Japan)

Takaine, Masak, Numata, Osamu, Nakano, Kentaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

65

2PS039 Analysis of cooperative interaction of Dictyostelium-derived cofilin and HMM to F-actin using fluorescence microscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Nishikawa, Yusuke, Satoh, Ayumi, Ueda, Taro Q. P., Tokuraku, Kiyotaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 404 KB

english, 2012

66

2PS040 Molecular mechanisms of reversible changes in stiffness of echinoderm collagenous 'catch' connective tissues(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamada, Akira, Takehana, Yasuhiro, Tamori, Masaki, Motokawa, Tatsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

67

2PS041 Cooperative function of raft domains and actin skeleton utilized for anthrax toxin assembly and internalization : a single-molecule study(The 50th Annual Meeting of the Biophysical Society of Japan)

Kudo, Yukihiko, Liu, An-An, Liu, Shihui, Suzuki, Kenichi, Fujiwara, Takahiro, Pang, Dai-Wen, Leppla, Stephen, Kusumi, Akihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

68

2PS042 Imaging, tracking and analysis on the intranulclear moving particles(The 50th Annual Meeting of the Biophysical Society of Japan)

Uchibori, Soyomi, Kuramochi, Maiko, Mimatsu, Saori, Kobayashi, Emiko, Katoh, Kaoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

69

2PS046 Chemotactic response of Salmonella in high cell density(The 50th Annual Meeting of the Biophysical Society of Japan)

Abe, Takahiro, Nakamura, Shuichi, Kudo, Seishi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

70

2PS048 Difference of migrating directions among fast crawling cell types on a substratum with cyclic stretch-shrinkage(The 50th Annual Meeting of the Biophysical Society of Japan)

Okimura, Chika, Mizuno, Takafumi, Sato, Katsuya, Nakashima, Yuta, Minami, Kazuyuki, Nakashima, Hitomi, Iwadate, Yoshiaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

71

2PS049 Localization control of chemotaxis-related signaling components of Vibrio cholera(The 50th Annual Meeting of the Biophysical Society of Japan)

Okabe, Hiroki, Nakamura, Tomoyuki, Geetha, Hiremath, Kawagishi, Ikuro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

72

2PT001 I-StDom : A dataset of Independently foldable Structural Domains automatically delineated from protein structures(The 50th Annual Meeting of the Biophysical Society of Japan)

Umezawa, Yuki, Ebina, Teppei, Kuroda, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

73

2SC-05 Visualizing Chromosome Structure with Superresolution Microscopy(2SC Living matter far from equilibrium: from DNA to cytoskeletons and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

74

2SC-06 Transport and selection for DNA and RNA : An approach to the origin of life(2SC Living matter far from equilibrium: from DNA to cytoskeletons and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Maeda, Yusuke, Libchaber, Albert

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 401 KB

english, 2012

75

2PT003 Modeling structure of large insersion regions in homology modeling bu utilizing non-sequential structure relationship(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakagawa, Yuki, Minami, Shintaro, Sawada, Kengo, Chikenji, George

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

76

2PT005 PoSSuM : a database for searching similar pairs of known and potential ligand-binding sites in proteins(The 50th Annual Meeting of the Biophysical Society of Japan)

Ito, Jun-ichi, Tabei, Yasuo, Shimizu, Kana, Tsuda, Koji, Tomii, Kentaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

77

2PT009 Some characteristic features of non-sequential structural alignment : difference between sequential and non-sequental alignments(The 50th Annual Meeting of the Biophysical Society of Japan)

Mukai, Tatsuo, Sawada, Kengo, Minami, Shintaro, Chikenji, George

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

78

2PT010 Prediction of the types of carbohydrate-binding proteins(The 50th Annual Meeting of the Biophysical Society of Japan)

Ge, Zhenyi, Cao, Wei, Sumikoshi, Kazuya, Nakamura, Shugo, Shimizu, Kentaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

79

2PT101 Protein-Ligand Binding Site Prediction by Using Energy-based Method with Amino Acid Conservation Scores(The 50th Annual Meeting of the Biophysical Society of Japan)

Tsujikawa, Hiroto, Umeda, Yusuke, Morita, Mizuki, Nakamura, Shugo, Shimizu, Kentaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

80

2PT102 Analysis of Domain and Non-Domain Interactions in Protein-Protein Interaction Network(The 50th Annual Meeting of the Biophysical Society of Japan)

Komori, Satoshi, Sarai, Akinori, Fujii, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

81

2PT103 3D complex structure assignment for evolutionary conserved protein-protein interactions(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawabata, Takeshi, Nakamura, Haruki, Kinjo, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 398 KB

english, 2012

82

2PT104 Development of re-docking method by obtaining native interaction pattern(The 50th Annual Meeting of the Biophysical Society of Japan)

Uchikoga, Nobuyuki, Matsuzaki, Yuri, Ohue, Masahito, Akiyama, Yutaka, Hirokawa, Takatsugu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

83

2PT105 Comprehensive comparisons of interactions in small-ligand recognitions by proteins at the atomistic level(The 50th Annual Meeting of the Biophysical Society of Japan)

Kasahara, Kota, Kinoshita, Kengo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

84

2PT108 Physical characteristics of amino acid fragments around point mutation with disease susceptibility in apolipoproteins(The 50th Annual Meeting of the Biophysical Society of Japan)

Masai, Ryouta, Yokoyama, Yasunori, Mitaku, Shigeki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

85

2PT110 Differences between key amino acid residues for the transitions L- to R- and R- to L-protofilaments of Salmonella flagellar filament(The 50th Annual Meeting of the Biophysical Society of Japan)

Hayashi, Fumio, Tomaru, Hidetoshi, Furukawa, Eiji, Ikeda, Kanami, Oosawa, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

86

2PT111 Structural analysis of the oligomerization mechanism of amyloid beta peptide(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamauchi, Hitomi, Iwamoto, Shigeto, Saito, Takashi, Kohno, Toshiyuki, Saido, Takaomi, Terasawa, Hiroaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

87

2PT114 Structure and function of Gnk2, a DUF26 protein with antifungal activity(The 50th Annual Meeting of the Biophysical Society of Japan)

Miyakawa, Takuya, Sawano, Yoriko, Hatano, Ken-ichi, Tanokura, Masaru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

88

2PT117 The prediction of three dimensional structure for mutants of actinin-4(The 50th Annual Meeting of the Biophysical Society of Japan)

Miura, Nami, Banno, Miho, Honda, Kazufumi, Miyanaga, Akihiko, Yamada, Tesshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

89

2PT118 New fluorescent protein indicator for intracellular protein concentration(The 50th Annual Meeting of the Biophysical Society of Japan)

Morikawa, Takamitsu, Imada, Katsumi, Yoshizawa, Keiko, Yanagida, Toshio, Nagai, Takeharu, Watanabe, Tomonobu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

90

2PT121 Cooperative Motion Analysis of group II chaperonin at Single-molecule Level using Diffracted X-ray Tracking(The 50th Annual Meeting of the Biophysical Society of Japan)

Sekiguchi, Hiroshi, Nakagawa, Ayumi, Moriya, Kazuki, Arita, Mayuno, Yamamoto, Yohei, Ichiyanagi, Kouhei, Yohda, Masafumi, Yagi, Naoto, Sasaki, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

91

2PT124 Legionella DotI and DotJ form a multimeric subcomplex associated with the core complex of the Dot/Icm type IVB secretion system(The 50th Annual Meeting of the Biophysical Society of Japan)

Kubori, Tomoko, Kuroda, Takuya, Imada, Katsumi, Nagai, Hiroki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 396 KB

english, 2012

92

2PT126 NMR study on DNA mismatch repair protein MutL(The 50th Annual Meeting of the Biophysical Society of Japan)

Mizushima, Ryota, Takai, Tomoyo, Lee, Young-Ho

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

93

2PT128 Single-molecule FRET measurement of a intrinsically disordered C-tail domain of an epidermal growth factor receptor(The 50th Annual Meeting of the Biophysical Society of Japan)

Okamoto, Kenji, Sako, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

94

2PT129 Effect of osmotic pressure on protein unfolding and cross-beta transition(The 50th Annual Meeting of the Biophysical Society of Japan)

Takeuchi, Kazuki, Hirai, Mitsuhiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

95

2PT136 All-atom molecular dynamics simulation of multidrug transporter AcrB(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamane, Tsutomu, Ikeguchi, Mitsunori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

96

2PT137 Molecular dynamics simulations and binding free energy analysis of xanthine oxidoreductase-ligand complexes(The 50th Annual Meeting of the Biophysical Society of Japan)

Kikuchi, Hiroto, Fujisaki, Hiroshi, Furuta, Tadaomi, Okamoto, Ken, Nishino, Takeshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

97

2PT138 Features of Amino Acids Changes Determining the Glycan Specificities of Influenza Hemagglutinins : Interaction Energy Profiles(The 50th Annual Meeting of the Biophysical Society of Japan)

Omagari, Katsumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

98

2PT140 Computational design of small peptide inhibotrs of protein-protein interactions in intracellular signaling(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamagishi, Junya, Okimoto, Noriaki, Kasai, Takuma, Okada, Mariko, Imamoto, Akira, Taiji, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 397 KB

english, 2012

99

2PT141 Theoretical study of change of motility by local mutation in DHFR(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsubara, Tomo, Fujii, Masashi, Nishimori, Hiraku, Awazu, Akinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

100

2PT143 Research of Split Point and Fluorescent Recovery of Green Fluorescent Protein by Molecular Dynamics Simulation(The 50th Annual Meeting of the Biophysical Society of Japan)

Ito, Mashiho, Takada, Shoji, Ozawa, Takeaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

101

2PT145 Fluorescence Titration for finding the binding sites of Peptide Aptamers on Calmodulin(The 50th Annual Meeting of the Biophysical Society of Japan)

Manandhar, Yasodha, Wang, Wei, Uzawa, Takanori, Ito, Yoshihiro, Aigaki, Toshiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 393 KB

english, 2012

102

2SD-01 Dynamics and stability of proteins in cellular environments(2SD Supercomputing in Molecular Network to Cellular Dynamics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

103

2SD-02 How supercomputing can help change cell biology(2SD Supercomputing in Molecular Network to Cellular Dynamics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Takahashi, Koichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

104

2SE-01 Elucidation of the directional switching mechanism of the bacterial flagellar motor(2SE Harmonized supramolecular machinery for motility and its diversity,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Miyata, Tomoko, Kato, Takayuki, Fujii, Takasi, Nakamura, Shuichi, Morimoto, Yusuke, Minamino, Tohru, Matsunami, Hideyuki, Namba, Keiichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

105

2PT146 Characterization of norovirus RNA replicase in vitro for the autonomous protein evolution using in vitro virus(The 50th Annual Meeting of the Biophysical Society of Japan)

Arai, Hidenao, Biyani, Manish, Husimi, Yuzuru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 202 KB

english, 2012

106

2PT149 The DNA Polymerase Specificity on Microwave Assisted PCR(The 50th Annual Meeting of the Biophysical Society of Japan)

Osoegawa, Hiroya, Higa, Seiji, Takei, Takaya, Tanaka, Kaori, Yoshimura, Takeo, Ohuchi, Shokichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 202 KB

english, 2012

107

2PT151 Computational and experimental studies on heme-binding and heme-transport mechanisms of Isd proteins of Staphylococcus aureus(The 50th Annual Meeting of the Biophysical Society of Japan)

Moriwaki, Yoshitaka, Terada, Tohru, Caaveiro, Jose M. M., Takaoka, Yousuke, Hamachi, Itaru, Tsumoto, Kouhei, Shimizu, Kentaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 394 KB

english, 2012

108

2PT158 Electrochemically-driven cytorhcome P450 reactions at organic films and its bioprocess application(The 50th Annual Meeting of the Biophysical Society of Japan)

Mie, Yasuhiro, Tateyama, Emi, Komatsu, Yasuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

109

2PT161 Design and construction of ancestral Osteichthyes hemoglobin genes and its expression in Escherichia coli(The 50th Annual Meeting of the Biophysical Society of Japan)

Sugiyama, Sho, Matsuo, Takatoshi, Seki, Kazuha, Nakagawa, Taro, Imai, Kiyohiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 404 KB

english, 2012

110

2PT165 Computational analysis of multiple oxygen migration pathways in human hemoglobin(The 50th Annual Meeting of the Biophysical Society of Japan)

Takayanagi, Masayoshi, Kurisaki, Ikuo, Nagaoka, Masataka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

111

2PT166 Theoretical analysis of fully-hydrated structures of human adult hemoglobin exploiting molecular dynamics simulations(The 50th Annual Meeting of the Biophysical Society of Japan)

Itagaki, Tetsuhiko, Kang, Jiyoung, Tateno, Masaru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

112

2PT170 Protonation State of Arginine 52 near the Low Barrier Hydrogen Bond in Photoactive Yellow Protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Yonezawa, Kento, Kamikubo, Hironari, Yoshida, Keito, Yamaguchi, Shigeo, Tamada, Tarou, Kurihara, Kazuo, Yamazaki, Yoichi, Yamaguchi, Mariko, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

113

2PT174 Roles of hydrogen bonds around chromophore in Photoactive Yellow Protein studied by OH-defficient cinnamic acid(The 50th Annual Meeting of the Biophysical Society of Japan)

Narumi, Masatoshi, Yamazaki, Yoichi, Yamaguchi, Mariko, Kamikubo, Hironari, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

114

2PT176 The role of chloride in the photo-induced proton transfer in sensory rhodopsin II from Natronomonas pharaonis(The 50th Annual Meeting of the Biophysical Society of Japan)

Tamogami, Jun, Iwano, Katsunori, Matsuyama, Atsushi, Kikukawa, Takashi, Demura, Makoto, Shimono, Kazumi, Nara, Toshifumi, Kamo, Naoki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

115

2PT179 Homo-trimeric assembly of a cyanobacterial ion-pump Gloeobacter rhodopsin(The 50th Annual Meeting of the Biophysical Society of Japan)

Tsukamoto, Takashi, Kikukawa, Takashi, Kamiya, Masakatsu, Aizawa, Tomoyasu, Kawano, Keiichi, Jung, Kwang-Hwan, Kamo, Naoki, Demura, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

116

2PT180 Relationship between palmitoylations and raftophilicity of rhodopsin(The 50th Annual Meeting of the Biophysical Society of Japan)

Seno, Keiji, Hayashi, Fumio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

117

2PT182 Water hydrogen-bonding dynamics in the function of pharaonis halorhodopsin studied by time-resolved FTIR spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujiwara, Kuniyo, Kimura, Tetsunari, Kikukawa, Takashi, Demura, Makoto, Kandori, Hideki, Furutani, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

118

2PT183 Structural changes in the chimeric Channelrhodopsins revealed by ATR-FTIR spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Inaguma, Asumi, Tsukamoto, Hisao, Kimura, Tetsunari, Ishizuka, Toru, Yawo, Hiromu, Furutani, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

119

2PT184 Crystal Structure of deltarhodospin from Haloterrigena Thermotolerans(The 50th Annual Meeting of the Biophysical Society of Japan)

Zhang, Jin, Mizuno, Katsuhide, Kouyama, Mizuno

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

120

2PT185 The chroride ion uptake mechanism in pharaonis halorhodopisin as studied by the energy representation method(The 50th Annual Meeting of the Biophysical Society of Japan)

Tamura, Hiroyuki, Chiba, Shuntaro, Sakuraba, Shun, Matsubayasi, Nobuyuki, Sakurai, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

121

2PT186 Time Dependent Characteristics of Firefly Bioluminescence Initiated by Two Methods with Usual ATP Injection and Photolysis of Caged-ATP(The 50th Annual Meeting of the Biophysical Society of Japan)

Yanagisawa, Yuki, Kageyama, Takeshi, Tanaka, Masatoshi, Ohno, Shin-ya, Wada, Naohisa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

122

2PT188 Molecular Basis for the Blue-shifted Photoconversion of PixJ1, Phytochrome-like Photoreceptor in Cyanobacterium, Studied by FTIR(The 50th Annual Meeting of the Biophysical Society of Japan)

Zikihara, Kazunori, Yoshihara, Shizue, Kitano, Takahiro, Katsura, Hitomi, Kohchi, Takayuki, Tokutomi, Satoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

123

2PT189 Mechanism of thermal activation of visual pigments in the dark(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawata, Daiki, Katayama, Kota, Imai, Hiroo, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

124

2PT191 Overexpression of chicken cryptochrome4 in a budding yeast and its purification using a specific monoclonal antibody(The 50th Annual Meeting of the Biophysical Society of Japan)

Mitsui, Hiromasa, Maeda, Toshinori, Yamaguchi, Chiaki, Tsuji, Yusuke, Kubo, Yoko, Okano, Keiko, Okano, Toshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

125

2PT192 Blue-light induced conformational change of a transcription factor, AUREO1(The 50th Annual Meeting of the Biophysical Society of Japan)

Hisatomi, Osamu, Takeuchi, Ken, Nakatani, Youichi, Takahashi, Fumio, Kataoka, Hironao

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

126

2PT201 In silico hybridization : A new tool for the classification of prokaryotic cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Ihara, Kunio, Kitajima-Ihara, Tomomi, Kamekura, Masahiro, Echigo, Akinobu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

127

2PT203 Experimental approach to the amino acid usage of pre-last universal ancestor(The 50th Annual Meeting of the Biophysical Society of Japan)

Shimada, Masami, Akanuma, Satoshi, Shinozaki, Kozue, Nakajima, Yoshiki, Yamagishi, Akihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

128

2PT205 Directed evolution of a self-encoding system using giant liposome(The 50th Annual Meeting of the Biophysical Society of Japan)

Sunami, Takeshi, Ichihashi, Norikazu, Nishikawa, Takehiro, Kazuta, Yasuaki, Matsuura, Tomoaki, Suzuki, Hiroaki, Yomo, Tetsuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

129

2SE-02 Structural Organization of Macromolecular assemblies -Magnetosome, Cytoskeleton and Flagella- in Magnetotactic Bacteria(2SE Harmonized supramolecular machinery for motility and its diversity,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Fukumori, Yoshihiro, Taoka, Azuma

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

130

2SE-04 New foci to clarify Mycoplasma gliding(2SE Harmonized supramolecular machinery for motility and its diversity,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

131

2SE-05 Secretion and Gliding in Bacteroides(2SE Harmonized supramolecular machinery for motility and its diversity,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Sato, Keiko, Nakane, Daisuke, Wada, Hirofumi, Imada, Katsumi, McBride, Mark J, Nakayama, Koji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

132

2SF-01 Inconsistency between population and single cell growth rates revealed by dynamics cytometer(2SF Inherent variability and information coding in biological systems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Wakamoto, Yuichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

133

2PT206 Modular spatial stabilization of leafy moth/butterfly wing pattrns for precise mimesis(The 50th Annual Meeting of the Biophysical Society of Japan)

Suzuki, Takao K., Sezutsu, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

134

2PT210 The robust and the optimal adaptation in species-transition network from the perspective of the lattice theory(The 50th Annual Meeting of the Biophysical Society of Japan)

Niizato, Takayuki, Gunji, Yukio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

135

2PT211 Study on competitive reaction between enzymes with different diffusivity(The 50th Annual Meeting of the Biophysical Society of Japan)

Yashima, Kenta, Nakabayashi, Jun, Sasaki, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 394 KB

english, 2012

136

2PT212 Counting statistics for genetic switches(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

137

2PT213 Transitions of the cell state in the early stage of differentiation from the pluripotent cell(The 50th Annual Meeting of the Biophysical Society of Japan)

Makishi, Kou, Terada, Tomoki P., Sasai, Masaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

138

2PT214 Regulation network analysis of plant hormones in Arabidopsis thaliana(The 50th Annual Meeting of the Biophysical Society of Japan)

Miyamoto, Mariko, Nishimori, Hiraku, Awazu, Akinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

139

2PT215 Toward simulation of epidermal growth factor (EGF) pathway at the molecular resolution for K computer(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwamoto, Kazunari, Kaizu, Kazunari, Takahashi, Koichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

140

2PT222 Two-dimensional cellular automata simulation of the self-assembly and self-reproduction phenomenon of cell(The 50th Annual Meeting of the Biophysical Society of Japan)

Ishida, Takeshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

141

2PT224 Spontaneous and Evoked Neural Activities Shaped through A Sequential Learning Process(The 50th Annual Meeting of the Biophysical Society of Japan)

Kurikawa, Tomoki, Kaneko, Kunihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

142

2PT225 A theory of the coordinated switching in the rotational direction of multiple flagellar motors in a single bacterium(The 50th Annual Meeting of the Biophysical Society of Japan)

Namba, Toshinori, Shibata, Tatsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

143

2PT228 Single cell distribution analysis of motility reveals the heterogeneity of Escherichia coli(The 50th Annual Meeting of the Biophysical Society of Japan)

Takagi, Daisuke, Hakamada, Kazumi, Miyake, Jun

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

144

2PT232 Cyanobacterial circadian clock is nullified by low temperature through Hopf bifurcation(The 50th Annual Meeting of the Biophysical Society of Japan)

Murayama, Yoriko, Kori, Hiroshi, Kondo, Takao, Iwasaki, Hideo, Ito, Hiroshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

145

2PT233 Spatiotemporal Patterns of Neural Activities in the Olfactory Center of the Land Slug and the Nonlinear Analysis(The 50th Annual Meeting of the Biophysical Society of Japan)

Shimokawa, Tomoya, Hamasaki, Yuuta, Komatsuzaki, Yoshimasa, Saito, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

146

2PT234 Motion analysis of collective soldier crab swarms(The 50th Annual Meeting of the Biophysical Society of Japan)

Murakami, Hisashi, Nishiyama, Yuta, Niizato, Takayuki, Enomoto, Koichiro, Toda, Masashi, Moriyama, Toru, Iizuka, Kojiro, Gunji, Yukio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

147

2PT236 Computation of emotional information by using numerical model of true slime mold(The 50th Annual Meeting of the Biophysical Society of Japan)

Tani, Iori, Gunji, Yukio-Pegio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

148

2PT238 Droplet-based microfluidic system for nonequilibrium artificial cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Takinoue, Masahiro, Sugiura, Haruka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 158 KB

english, 2012

149

2PT240 Feedback-enhanced active-passive microrheology in cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Arimatsu, Hiroshi, Bremerich, Marcel, MIzuno, Daisuke, Ayade, Heev, Zhang, Peijuan

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 158 KB

english, 2012

150

3PS001 Configuration changes of Chlamydomonas dynein-f tail coupled with IC138 phosphorylation(The 50th Annual Meeting of the Biophysical Society of Japan)

Sakakibara, Hitoshi, Oiwa, Kazuhiro, Kojima, Hiroaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

151

3PS002 Expression and purification of human axonemal dynein for studying cilia/flagella beating(The 50th Annual Meeting of the Biophysical Society of Japan)

Furuta, Akane, Furuta, Ken'ya, Amino, Misako, Kojima, Hiroaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

152

3PS003 Tubulin polyglutamylation regulates axonemal motility by modulating the function of a specific inner-arm dynein species(The 50th Annual Meeting of the Biophysical Society of Japan)

Kubo, Tomohiro, Yagi, Toshiki, Kamiya, Ritsu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

153

3PS004 High-Speed-AFM Observation of Processive Movement of Cytoplasmic Dynein(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujita, Shuji, Aathi, Karunakaran, Uchihashi, Takayuki, Ronald D., Vale, Ando, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

154

3PS005 Oscillation of a microtubule array driven by axonemal dynein(The 50th Annual Meeting of the Biophysical Society of Japan)

Aoyama, Susumu, Hiratsuka, Yuichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

155

1YS0915 Imaging of temperature distribution in a living cell(The 50th Annual Meeting of the Biophysical Society of Japan)

Okabe, Kohki, Uchiyama, Seiichi, Inada, Noriko, Harada, Yoshie, Funatsu, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

156

3PS012 The structure of the flagellar cap-junction complex by electron cryomicroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Makino, Fumiaki, Kato, Takayuki, Miyata, Tomoko, Namba, Keiichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 397 KB

english, 2012

157

3PS014 Time-dependetn Poisson's ratio and Power-law rheology of cell sheet in uniaxial stretching experiment(The 50th Annual Meeting of the Biophysical Society of Japan)

Tsuchiya, Masahiro, Mizutani, Yusuke, Okajima, Takaharu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

158

3PS015 High-speed measurement of single cell rheology with an atomic force microscope(The 50th Annual Meeting of the Biophysical Society of Japan)

Takahashi, Ryosuke, Ichikawa, Satoshi, Okajima, Takaharu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

159

3PS017 Pilot study for the development of high-speed ultrasonic AFM(The 50th Annual Meeting of the Biophysical Society of Japan)

Nagashima, Yasuto, Saito, Tomofumi, Kodera, Noriyuki, Ando, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

160

2SF-02 Information Processing via Noisy Biochemical Channels(2SF Inherent variability and information coding in biological systems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kobayashi, Tetsuya J., Kamimura, Atsushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

161

2SF-04 Fluctuating signals in cellular signal transduction systems(2SF Inherent variability and information coding in biological systems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Shibata, Tatsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

162

2SF-06 Stochastic expression of cell adhesion molecules in individual neurons(2SF Inherent variability and information coding in biological systems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

163

3PS025 Development of Projection X-ray Microscope for Micro-Tomography(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshimura, Hideyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

164

3PS028 Information analysis by visualizing Shannon entropy using Imaging Mass Spectrometric data(The 50th Annual Meeting of the Biophysical Society of Japan)

Masaki, Noritaka, Setou, Mitsutoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 393 KB

english, 2012

165

3PS029 Direct observation of protein folding mediated by the football-shaped GroEL-GroES complex(The 50th Annual Meeting of the Biophysical Society of Japan)

Takei, Yodai, Iizuka, Ryo, Ueno, Taro, Funatsu, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

166

3PS030 Combining of isotropic TIRFM and polarization-modulation TIRFM(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujimura, Shoko, Hasimoto, Yuh, Adachi, Kengo, Nakayama, Rinako, Masaike, Tomoko, Nishizaka, Takayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

167

3PS031 Live-cell secretion imaging assay of the inflammatory cytokine from human monocytes(The 50th Annual Meeting of the Biophysical Society of Japan)

Shirasaki, Yoshitaka, Shimura, Nanako, Suzuki, Nobutake, Izawa, Kazushi, Nakahara, Asahi, Yamagishi, Mai, Harada, Yoshie, Shouji, Shuichi, Nishikomori, Ryuta, Ohara, Osamu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

168

3PS032 Intracellular dynamics of the xenobiotic efflux proteins in Escherichia coli(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Kentaro, Inaba, Takehiko, Sowa, Yoshiyuki, Kawagishi, Ikuro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

169

3PS033 Quantitative analysis of changes in molecular dynamics of Arp4 upon transcriptional activation using single-molecule fluorescence imaging(The 50th Annual Meeting of the Biophysical Society of Japan)

Ichinomiya, Katsuo, Harata, Masahiko, Sakata-Sogawa, Kumiko, Tokunaga, Makio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

170

3PS035 Dynamics of intracellular Ca^ distribution measured by genetically encoded Ca^ indicators(The 50th Annual Meeting of the Biophysical Society of Japan)

Oyama, Hirofumi, Ito, Yuma, Ikeda, Satoshi, Sakata-Sogawa, Kumiko, Tokunaga, Makio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

171

3PS036 Fluorescence imaging of histidine kinases and response regulators of Escherichia coli(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamura, Daigo, Iritani, Yuka, Fukushima, Mitsuyasu, Yamakawa, Akiko, Sawaki, Hiroyuki, Inaba, Takehio, Banno, Satomi, Kawagishi, Ikuro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

172

3PS038 Molecular structure analysis of the human hair samples by using VSFG detected IR super-resolution microscope(The 50th Annual Meeting of the Biophysical Society of Japan)

Kikuchi, Katsuya, Sato, Takaki, Tajima, Tomoki, Fujii, Masaaki, Nagase, Shinobu, Hirano, Yuuji, Itou, Takashi, Sakai, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

173

3PS041 The imaging analysis of mitochondria with retardation mediated differential interference microscope (RM-DIC)(The 50th Annual Meeting of the Biophysical Society of Japan)

Haseda, Keisuke, Kanematsu, Keita, Ohta, Yoshihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

174

3PS044 ECM coating on polydimethylsiloxane for hiPSCs culture(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshimitsu, Ryosuke, Hattori, Koji, Sugiura, Shinji, Kanamori, Toshiyuki, Ohonuma, Kiyoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 404 KB

english, 2012

175

3PS045 Perfusion device to observe of single ES cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamura, Shougo, Maruyama, Atushi, Wakamoto, Yuichi, Sakai, Shin-ichi, Hexig, Bayar, Akaike, Toshihiro, Ohnuma, Kiyoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

176

3PS048 Event driven time lapse image analysis reveal the promoter activity(The 50th Annual Meeting of the Biophysical Society of Japan)

Hakamada, Kazumi, Somei, Yusaku, Miyake, Jun

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

177

3PS050 Microorganism cultivation under microwave irradiation and its proteomic analysis(The 50th Annual Meeting of the Biophysical Society of Japan)

Nagayoshi, Wataru, Hoshino, Rintaro, Kurita, Yuki, Shiraishi, Arata, Yoshimura, Takeo, Kodama, Toru, Ohuchi, Shokichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

178

3PT005 Quantitative study of Homo-Dimer Glucocorticoid Receptor interaction by using Fluorescence Cross Correlation Spectros-copy in living cell(The 50th Annual Meeting of the Biophysical Society of Japan)

Tiwari, Manisha, Mikuni, Shintaro, Kinjo, Masataka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

179

3PT006 Transcription factor p53 searching dynamics on nucleosomal DNA: Coarse-grained molecular dynamics simulation study(The 50th Annual Meeting of the Biophysical Society of Japan)

Terakawa, Tsuyoshi, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

180

3PT007 Movement of T4 sliding clamp on DNA studied by coarse-grained molecular simulations(The 50th Annual Meeting of the Biophysical Society of Japan)

Narihara, Itaru, Terakawa, Tsuyoshi, Kenzaki, Hiroo, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

181

3PT008 Free-energy landscape of tRNA translocation through ribosome analysed using MD simulations and cryo-EM density maps(The 50th Annual Meeting of the Biophysical Society of Japan)

Ishida, Hisashi, Matsumoto, Atsushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

182

3PT009 Mono- and poly-nucleosome structural dynamics by coarse-grained simulations(The 50th Annual Meeting of the Biophysical Society of Japan)

Kenzaki, Hiroo, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 393 KB

english, 2012

183

3PT101 How dose Environmental Solution Conditions Determine the Compaction Velocity of Single DNA Molecules?(The 50th Annual Meeting of the Biophysical Society of Japan)

Hirano, Ken, Ishido, Tomomi, Nakamichi, Katsuhisa, Ogawa, Naoki, Ichikawa, Masatoshi, Yoshikawa, Kenichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

184

3PT102 Driving and Reversible Photo-control of Motility of a Kinesin/Microtubule System by a Novel Photochromic ATP Analogue(The 50th Annual Meeting of the Biophysical Society of Japan)

Kamei, Takashi, Fukaminato, Tuyoshi, Tamaoki, Nobuyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

185

3PT103 Bending stiffness of double-stranded DNA measured by winding single-molecule on a nanometer-sized reel(The 50th Annual Meeting of the Biophysical Society of Japan)

You, Huijuan, Iino, Ryota, Watanabe, Rikiya, Noji, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 394 KB

english, 2012

186

3PT104 GC and AT pairs show different entropic stabilization of DNA structures found in single-molecule mechanical unzipping(The 50th Annual Meeting of the Biophysical Society of Japan)

Fukagawa, Akihiro, Hiroshima, Michio, Tokunaga, Makio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

187

3PT106 Comparison of dGMP and 8-oxo-dGMP conformation by molecular dynamics simulations: effect of ions(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujiwara, Shin-ichi, Amisaki, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

188

3PT107 RNA 3D structure prediction by using coarse-grained molecular dynamics simulation(The 50th Annual Meeting of the Biophysical Society of Japan)

Kameda, Tomoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

189

3PT108 The influence of solvent condition on DNA structures studied by molecular dynamics simulations(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujii, Satoshi, Kono, Hidetoshi, Sarai, Akinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 393 KB

english, 2012

190

3PT109 Model for self-assembly of flexible DNA motifs using stacking interactions(The 50th Annual Meeting of the Biophysical Society of Japan)

Cervantes-Salguero, Keitel, Hamada, Shogo, Murata, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

191

3PT110 A Growth mechanism of DNA tile array(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsubara, Yuki, Otani, Nao, Tagawa, Miho, Suyama, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

192

3PT111 Construction and functional analysis of DNA origami base DNA-RNAP hybrid nanomachine(The 50th Annual Meeting of the Biophysical Society of Japan)

Masubuchi, Takeya, Tadakuma, Hisashi, Endo, Masayuki, Sugiyama, Hiroshi, Harada, Yoshie, Ueda, Takuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

193

3PT112 Adsorption of DNA ring onto Liposome(The 50th Annual Meeting of the Biophysical Society of Japan)

Kumagai, Yumiko, Hamada, Shogo, Nomura, Shin-ichiro, Murata, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

194

3PT113 Substrate-Assisted Self-Assembly of DNA Nanostructure on lipid bilayer(The 50th Annual Meeting of the Biophysical Society of Japan)

Kudo, Shogo, Hamada, Shogo, Nomura, Shin-ichiro, Murata, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

195

3PT114 Structure and affinity of bovine lactferrampin bind to neutral model membrane as studied by by solid state NMR and QCM(The 50th Annual Meeting of the Biophysical Society of Japan)

Imachi, Masayoshi, Namsrai, Javkhlantugs, Kira, Atsushi, Kawamura, Izuru, Naito, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

196

2SG-02 Quantitative analysis of single molecule imaging of the physicochemical field for genetic activities(2SG Dynamics of chromatin as the physicochemical field for genetic activities,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Sakata-Sogawa, Kumiko, Tokunaga, Makio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

197

2SG-04 Construction of genetic circuits underlying cell pattern formation(2SG Dynamics of chromatin as the physicochemical field for genetic activities,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

198

3PT117 Use of a dual specificity Wright antibody for the purification of structurally unstable band 3-glycophorin A complex(The 50th Annual Meeting of the Biophysical Society of Japan)

Ikeda, Yohei, Hatae, Hinako, Kuma, Hiroyuki, Hamasaki, Naotaka, Hirai, Teruhisa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

199

3PT119 Comparison of two expression systems using COS7 cells and yeast cells for expression of heart/muscle-type CPT1(The 50th Annual Meeting of the Biophysical Society of Japan)

Hada, Takuya, Kato, Yumiko, Obana, Eriko, Yamazaki, Naoshi, Yamamoto, Takenori, Shinohara, Yasuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

200

3PT121 Molecular mechanism underlying activation of the EGF receptor: preformed, inactive dimer and positive cooperativity(The 50th Annual Meeting of the Biophysical Society of Japan)

Miyagi, Hiraku, Maruyama, Ichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

201

3PT127 Structure, orientation and interactions of bovine lactoferram-pin in membrane bilayers(The 50th Annual Meeting of the Biophysical Society of Japan)

Javkhlantugs, Namsrai, Ueda, Kazuyoshi, Naito, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

202

3PT128 Laser flash photolysis study on the decay kinetics of the M photointermediate of bacteriorhodopsin in diheptanoylphos-phocholine micelles(The 50th Annual Meeting of the Biophysical Society of Japan)

Sonoyama, Masashi, Kuwabara, Yumiko, Kikukawa, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

203

3PT130 Prediction of α-helical membrane protein structures by replica-exchange simulations with implicit membrane model(The 50th Annual Meeting of the Biophysical Society of Japan)

Urano, Ryo, Okamoto, Yuko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

204

3PT133 ATP-Binding induced conformational change in CFTR as studied by MD simulation(The 50th Annual Meeting of the Biophysical Society of Japan)

Hagiya, Tomoka, Furuta, Tadaomi, Chiba, Shuntaro, Sohma, Yoshiro, Sakurai, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

205

3PT134 Development of enzyme activity detection system using liposome and functional antimicrobial peptide(The 50th Annual Meeting of the Biophysical Society of Japan)

Kashibe, Masayoshi, Mizukami, Shin, Kikuchi, Kazuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

206

3PT135 Adhesive force of a lipid bilayer between contacted cell-sized droplets(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshida, Taka-aki, Furuta, Miyuki, Matuda, Yui, Nakata, Satoshi, Tokita, Masayuki, Yanagisawa, Miho

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 205 KB

english, 2012

207

3PT136 Preparation of cell-sized liposomes by pulsed jet flow(The 50th Annual Meeting of the Biophysical Society of Japan)

Kamiya, Koki, Kawano, Ryuji, Osaki, Toshihisa, Takeuchi, Syoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 205 KB

english, 2012

208

3PT138 Size, morphology and lamellarity of giant liposomes generated from solute-containing lipid films(The 50th Annual Meeting of the Biophysical Society of Japan)

Tsumoto, Kanta, Kimura, Shota, Tomita, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 205 KB

english, 2012

209

3PT139 Endocytosis-like Uptake of Surface-Modified Nanoparticles into a Giant Liposome(The 50th Annual Meeting of the Biophysical Society of Japan)

Tahara, Kohei, Tadokoro, Satoshi, Kawashima, Yoshiaki, Hirashima, Naohide

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 386 KB

english, 2012

210

3PT141 Real-time observation of liposome tubulation by F-BAR(The 50th Annual Meeting of the Biophysical Society of Japan)

Takiguchi, Yohko, Itoh, Toshiki, Takiguchi, Kingo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

211

3PT142 Correlation between Membrane Composition and Mode of Division of PEG-grafted Giant Vesicles(The 50th Annual Meeting of the Biophysical Society of Japan)

Kan, Yumi, Kurihara, Kensuke, Toyota, Taro, Imai, Masayuki, Sugawara, Tadashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

212

3PT146 Effect of cytotoxic oxysterols on the molecular packing of phosphatidylcholine membranes(The 50th Annual Meeting of the Biophysical Society of Japan)

Hoshino, Tatsuya, Hikima, Takaaki, Takata, Masaki, Kobayashi, Toshihide, Takahashi, Hiroshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

213

3PT147 Hydration repulsive force of the interdigitated phase of dihexadecylphosphatidylcholine at subzero temperatures(The 50th Annual Meeting of the Biophysical Society of Japan)

Takahashi, Hiroshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

214

3PT151 Heat Capacity Measurement of Human Stratum Corneum using High-Sensitivity DSC(The 50th Annual Meeting of the Biophysical Society of Japan)

Oki, Keisuke, Hatta, Ichiro, Saruyama, Yasuo, Yao, Haruhiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

215

3PT152 Gel pattern formation in model cells coupled with phase separation(The 50th Annual Meeting of the Biophysical Society of Japan)

Nigorikawa, Shinpei, Tokita, Masayuki, Yanagisawa, Miho

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

216

1YS1045 Size-dependent selective localization of nano-particles on heterogeneous membrane surfaces(The 50th Annual Meeting of the Biophysical Society of Japan)

Hamada, Tsutomu, Morita, Masamune, Miyakawa, Makiyo, Takagi, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

217

3PT156 Low-frequency dynamics of phospholipid bilayers studied by terahertz time-domain spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Andachi, Tomoyo, Yamamoto, Naoki, Tamura, Atsuo, Tominaga, Keisuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

218

3PT159 Permeability of an ionic fluorescent probe through a BLM : dynamic analysis based on an electric current and a fluorescent change(The 50th Annual Meeting of the Biophysical Society of Japan)

Naka, Yasuhiro, Yoshida, Yumi, Shimazaki, Megumi, Sakai, Kazunari, Maeda, Kohji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

219

3PT161 Reconstitution of rhodopsin into micropatterned model biological membrane(The 50th Annual Meeting of the Biophysical Society of Japan)

Okada, Keisuke, Morigaki, Kenichi, Hayashi, Fumio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

220

3PT164 Identification of the interaction site with the effective phospholipids for the KcsA potassium channel activity(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwamoto, Masayuki, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

221

3PT165 Selective Ion Permeation though the Kv1.2 Channel(The 50th Annual Meeting of the Biophysical Society of Japan)

Sumikama, Takashi, Saito, Shinji, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

222

3PT167 Reconstitution of ion channel into lipid bilayer using glass needle(The 50th Annual Meeting of the Biophysical Society of Japan)

Okuno, Daichi, Hirano, Minako, Onishi, Yukiko, Yanagida, Toshio, Ide, Toru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 409 KB

english, 2012

223

2SH-01 Analysis of Single Molecular Gating Dynamics of the KcsA Potassium Channels Responding to Rapid Changes of Solutior Conditions(2SH Star of life shined by frontier microscopies,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Shimizu, Hirofumi, Iwamoto, Masayuki, Royant, Antoine, Davic von, Stetten, Guerin, Laurent, Aoki, Yoshimitsu, Wulff, Michael, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

224

2SH-02 Development of a mid-IR super-resolution microscope and its application to biological samples(2SH Star of life shined by frontier microscopies,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

225

2SH-05 Two-photon imaging of the mouse motor cortex during voluntary skilled movement(2SH Star of life shined by frontier microscopies,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Hira, Riichiro, Ohkubo, Fuki, Ozawa, Katsuya, Isomura, Yoshikazu, Kitamura, Kazuo, Kano, Masanobu, Kasai, Haruo, Matsuzaki, Masanori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

226

2SH-06 Chemiluminescence imaging of flow-induced ATP release at caveolae in vascular endothelial cells(2SH Star of life shined by frontier microscopies,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Kimiko, Ando, Joji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

227

3PT170 AFM Probing Opioid Signalosome on Neuroblastoma(The 50th Annual Meeting of the Biophysical Society of Japan)

Villaruz, Lara, Li, Junhua, Tardin, Catherine, Mizuno, Daisuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 221 KB

english, 2012

228

3PT173 The Initial Stage of Magainin 2-Induced Pore Formation in Lipid Membranes(The 50th Annual Meeting of the Biophysical Society of Japan)

Levadny, Victor, Takahashi, Tomoki, Alam, Jahangir Md., Yamazaki, Masahito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

229

3PT174 Rate constants of constant tension-induced pore formation in single GUVs(The 50th Annual Meeting of the Biophysical Society of Japan)

Tsuboi, Taka-aki, Levadny, Victor, Yamazaki, Masahito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

230

3PT179 Independent response of She and Grb2 in the ErbB signaling revealed by FCS/FCCS and single molecule analysis(The 50th Annual Meeting of the Biophysical Society of Japan)

Pack, Chang-Gi, Saeki, Yuko, Hiroshima, Michio, Okada, Mariko, Sako, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

231

3PT181 Spatial-temporal dynamics of calcium signaling and organelles in T cell activation(The 50th Annual Meeting of the Biophysical Society of Japan)

Shimozawa, Masahiro, Ito, Yuma, Tokunaga, Makio, Sakata-Sogawa, Kumiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

232

3PT182 Photo-regulation of small G protein Ras using photochromic molecule(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwata, Seigo, Maruta, Shinsaku

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

233

3PT183 Gradient sensing limit in Dictyostelium discoiduem cell(The 50th Annual Meeting of the Biophysical Society of Japan)

Watabe, Masaki, Kaizu, Kazunari, Takahashi, Koichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 408 KB

english, 2012

234

3PT184 Enhanced transcription of a porin gene in a 3-chlorobenzoate degrading bacterium, Burkholderia sp. NK8, with 3-chlorobenzoate(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Kimiko, Kawagishi, Ikuro, Fujii, Takeshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

235

3PT185 Thermosensing abilities of the mutant aspartate chemoreceptor Tar lacking the periplasmic domain(The 50th Annual Meeting of the Biophysical Society of Japan)

Nishiyama, So-ichiro, Jinguji, Masaaki, Kawagishi, Ikuro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

236

3PT186 Exploring the mechanism underlying sensing of the repellent Ni^ by the aspartate chemoreceptor Tar of Escherichia coll(The 50th Annual Meeting of the Biophysical Society of Japan)

Inui, Takaya, Tajima, Hirotaka, Sowa, Yosiyuki, Kawagishi, Ikuro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

237

3PT187 Characterization of the bacterial chemoreceptor Tcp that discriminates citrate and the citrate-metal ion complex as distinct attractants(The 50th Annual Meeting of the Biophysical Society of Japan)

Shiroi, Tetsuya, Kawagishi, Ikuro, Tajima, Hirotaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

238

3PT189 Functional diversity of bitter taste receptor TAS2R16 by amino acid substitution(The 50th Annual Meeting of the Biophysical Society of Japan)

Imai, Hiroo, Suzuki, Nami, Ishimaru, Yoshiro, Sakurai, Takanobu, Yin, Lijie, Pan, Wenshi, Abe, Keiko, Misaka, Takumi, Hirai, Hirohisa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

239

3PT191 Characterization of receptor clustering by cross-linking a series of cysteine-substituted mutants of the aspartate chemoreceptor Tar(The 50th Annual Meeting of the Biophysical Society of Japan)

Watanabe, Tsuyoshi, Jintori, Kosuke, Irieda, Hiroki, Kawagishi, Ikuro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

240

3PT192 Development of a system for swarm assays to evaluate chemotaxis of Vibrio cholera(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwazaki, Ryosuke, Nakagawa, Tsubasa, Nishiyama, So-ichiro, Kawagishi, Ikuro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

241

3PT202 Inhibitory effect of glutamate-stimulated astrocytes on action potentials evoked by bradykinin in cultured dorsal root ganglion neurons(The 50th Annual Meeting of the Biophysical Society of Japan)

Suzuki, Kazuo, Tonaka, Kenji, Ono, Minehisa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

242

3PT203 Nitric oxide measurement in mice brain homogenate(The 50th Annual Meeting of the Biophysical Society of Japan)

Kitamura, Yoshiichiro, Hirai, Akira, Nishio, Toshihiko, Kirino, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

243

3PT204 Localized neural activities in AIY interneuron of Caenorhab-ditis elegans : fluorescent imaging study(The 50th Annual Meeting of the Biophysical Society of Japan)

Shidara, Hisashi, Kobayashi, Junya, Tanamoto, Ryo, Hotta, Kohji, Oka, Kotaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

244

3PT207 Acute Modulation of Synaptic Plasticity of Pyramidal Neurons by Activin in Adult Hippocampus(The 50th Annual Meeting of the Biophysical Society of Japan)

Hasegawa, Yoshitaka, Mukai, Hideo, Asashima, Makoto, Ooishi, Yuki, Kawato, Suguru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

245

3PT211 Age-related changes in the expression of mRNAs encoding for sex steroidogenic enzymes and sex hormone receptors in the hippocampus(The 50th Annual Meeting of the Biophysical Society of Japan)

Kimoto, Tetsuya, Wakabayashi, Masahiko, Kawato, Suguru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

246

3PT212 CaMKII functions as a molecular memory through interaction with NMDA receptors : validation in in vitro experiments(The 50th Annual Meeting of the Biophysical Society of Japan)

Urakubo, Hidetoshi, Ishii, Shin, Kuroda, Shinya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 395 KB

english, 2012

247

3PT213 Novel program and its applications for spines in neurons(The 50th Annual Meeting of the Biophysical Society of Japan)

Mukai, Hideo, Hatanaka, Yuusuke, Mitsuhashi, Kenji, Murakami, Gen, Hojo, Yasushi, Kawato, Suguru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

248

3PT214 Evaluation of eyeblink classical conditioning in monkey by using high-speed video sensing and electromyogram signal(The 50th Annual Meeting of the Biophysical Society of Japan)

Kishimoto, Yasushi, Yamamoto, Shigeyuki, Suzuki, Kazutaka, Toyoda, Haruyoshi, Tsukada, Hideo, Kirino, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

249

3PT215 Histamine HI receptor-expressing neurons in the anterior part of the hypothalamic paraventricular nucleus inhibit food intake(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

250

3PT216 Sex difference in profile of hippocampal hormones generates sex difference in hippocampal function(The 50th Annual Meeting of the Biophysical Society of Japan)

Hojo, Yasushi, Wakabayashi, Masahiko, Yoshida, Kotaro, Kimoto, Tetsuya, Kawato, Suguru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

251

3PT217 Age-related changes in spine density and morphology of hippocampal neurons in relation to memory impairment(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawato, Suguru, Li, Koren, Hojo, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

252

3PT218 Whisker photostimulation induces spike and LFP responses in barrel cortex of ChR2 transgenic rat(The 50th Annual Meeting of the Biophysical Society of Japan)

Honjoh, Tatsuya, Ji, Zhi-Gang, Ishizuka, Toru, Yawo, Hiromu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 204 KB

english, 2012

253

3PT219 Dynamics of long-term activities of the olfactory center in the land slug(The 50th Annual Meeting of the Biophysical Society of Japan)

Tanaka, Yuichi, Katou, Kouya, Saito, Minoru, Komatsuzaki, Yoshimasa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

254

3PT220 Fluorescent Voltage Imaging of the Neural Activities in the Central Nervous System of the Pond Snail(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakada, Shogo, Hosoi, Makoto, Komatuzaki, Yosimasa, Saito, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

255

3PT223 Computational study of the phosphodiester hydrolysis of RNA by RNase H(The 50th Annual Meeting of the Biophysical Society of Japan)

Takano, Yu, Kita, Makoto, Nakamura, Haruki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

256

3PT224 First principles molecular simulation with a generalized-ensemble algorithm for studying chemical reactions of biomolecular systems(The 50th Annual Meeting of the Biophysical Society of Japan)

Mori, Yoshiharu, Okamoto, Yuko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

257

3PT225 Interaction Analysis of HIV-1 Antibody 2G12 and Glycans by Large-Scale Quantum Chemical Calculations based on FMO method(The 50th Annual Meeting of the Biophysical Society of Japan)

Noto, Kaori, Koyama, Yuka, Takano, Keiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

258

3PT226 FTIR analysis of the hydrogen bonding network around the O_2-evolving Mn_4CaO_5 cluster(The 50th Annual Meeting of the Biophysical Society of Japan)

Ota, Kai, Noguchi, Takumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

259

2SI-01 Is high efficiency necessary for organisms?(2SI The art of energetic and functional efficiency in biomoiecular machines on the single molecule level,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 224 KB

english, 2012

260

2SI-04 Estimation of driving force acting on a mitochondrion transported in a living cell: Application of the fluctuation theorem(2SI The art of energetic and functional efficiency in biomoiecular machines on the single molecule level,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Hayashi, Kumiko, Sato, Masaaki, Mouri, Kazunari, Pack, Chang-gi, Kaizu, Kazunari, Takahashi, Kouichi, Okada, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 300 KB

english, 2012

261

3PT228 Three different mechanisms of energy dissipation of a desiccation-tolerant moss to protect reaction centres against photo-oxidation(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamakawa, Hisanori, Fukushima, Yoshimasa, Itoh, Shigeru, Heber, Ulrich

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

262

3PT229 Development of artificial light-driven water splitting nanodevice using gold nanoparticles and photosystem II(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawahara, Kousuke, Tomo, Tatsuya, Noguchi, Takumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

263

3PT235 Local Structural Modifications around the Primary Electron Donor of the Green Sulfur Bacterial Photosynthetic Reaction Center(The 50th Annual Meeting of the Biophysical Society of Japan)

Azai, Chihiro, Sano, Yuko, Noguchi, Takumi, Oh-oka, Hirozo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

264

3PT239 MHz ultrasound inhibits leukemia cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Fuji, Risa, Kobayashi, Yusuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 59 KB

english, 2012

265

2SI-06 Direct Observation of Single Molecular Event in DNA Origami Frame(2SI The art of energetic and functional efficiency in biomoiecular machines on the single molecule level,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Sugiyama, Hiroshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 102 KB

english, 2012

266

1A1424 Powerful Algorithm for analyzing Stepping Motion of Biological Melecular Motors(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nakagawa, Takeshi, Sasaki, Kazuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

267

1A1436 Direct observation of the forward stepping motion of kinesin-1 using dark-field microscopy with 50-μs temporal resolution(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Isojima, Hiroshi, Iino, Ryota, Noji, Hiroyuki, Tomishige, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

268

1A1448 Front-head gating mechanism of kinesin-1 as studied by single molecule FRET observation of ATP binding(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Niitani, Yamato, Tomishige, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

269

1A1510 The test on the power stroke model of Ned(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamagishi, Masahiko, Toyoshima, Yoko, Yajima, Junichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

270

1SA-01 Cracking Reaction Networks Involving "Minorities" in the Cell : Theoretical and Computational Approaches(1SA Bridging single molecule biology and biochemistry to understand operation principles of blo-nanosystems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Togashi, Yuichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

271

1SA-02 Single-Molecule Digital ELISA(1SA Bridging single molecule biology and biochemistry to understand operation principles of blo-nanosystems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

272

10.2142/biophys.52.s200_1

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 141 KB

2012

273

Correlative Microscopy : Different flavors(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 174 KB

english, 2012

274

10.2142/biophys.52.s203_1

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 167 KB

2012

275

10.2142/biophys.52.s204

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 329 KB

2012

276

10.2142/biophys.52.s205

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 123 KB

2012

277

1A1546 Engineered disulfide crosslink in the the periplasmic region of PomB impaired function of the Na+-driven flagellar stator complex(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Zhu, Shiwei, Li, Na, Kojima, Seiji, Homma, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

278

1B1412 HD-exchange motion of free heptameric GroES studied by the use of TROSY and DMSO quenching followed by 2D NMR(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Chandak, Mahesh, Nakamura, Takashi, Makabe, Koki, Takenaka, Toshio, Chen, Jin, Kato, Koichi, Kuwajima, Kunihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

279

1B1436 Molecular mechanism of redox-dependent domain rearrangement of the substrate-binding region of protein disulfide isomerase(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Inagaki, Kouya, Uekusa, Yoshinori, Kamiya, Yukiko, Satoh, Tadashi, Kato, Koichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

280

1B1534 The possible advantage of structural disorder of intrinsically disordered pr oteins in the new type of signaling mechanism(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Shirai, Nobu C., Kikuchi, Macoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

281

1B1546 Structural fluctuations of capping proteins analyzed by molecular dynamics simulations(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Koike, Ryotaro, Takeda, Shuichi, Maeda, Yuichiro, Ota, Motonori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

282

1B1558 A Molecular Dynamics Study on Proton Pump Function of Cytochrome c Oxidase(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamashita, Takefumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

283

1B1610 Substrate transport mechanisms in GatCAB : the smallest unidirectional valve in subnano scale(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kang, Jiyoung, Kuroyanagi, Shigehide, Hagiwara, Yohsuke, Tateno, Masaru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

284

1C1400 New colorimetric sandwich assay for detection of pathogens by using antimicrobial peptides as detection probes(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sakai, Chihiro, Hojo, Eri, Nakazumi, Taichi, Tomisawa, Satoshi, Kikukawa, Takashi, Kumaki, Yasuhiro, Kamiya, Masakatsu, Demura, Makoto, Kawano, Keiichi, Ohtsuki, Ryuji, Yonekita, Taro, Morishita, Naok

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 410 KB

english, 2012

285

1C1412 Toward a simplified screening method using a novel VanX cell lysis activity(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Wu, Nan, Kamioka, Tetsuya, Sohya, Shihori, Matsuda, Tomoki, Ikegami, Takahisa, Nakamura, Haruki, Kuroda, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 221 KB

english, 2012

286

1C1510 Hybrid nano-cellulosome: functional analysis of various cellulose binding module as component of artificial cellulosome(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nakazawa, Hikaru, Kim, Do-myoung, Matuyama, Takashi, Ishida, Nobuhiro, Ikeuchi, Akinori, Kumagai, Izumi, Umetsu, Mitsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 409 KB

english, 2012

287

1C1534 Construction of an in vitro gene screening system for membrane proteins(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Soga, Haruka, Fujii, Satoshi, Yomo, Tetsuya, Watanabe, Hajime, Matsuura, Tomoaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

288

1C1610 Development of resonant X-ray scattering method of metalloproteins in solutions(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hirai, Mitsuhiro, Takeuchi, Kazuki, Kimura, Ryota, Ohta, Noboru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

289

1D1400 Single-cell-based analysis of differentiation of mouse ES cells(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Maruyama, Atsushi, Wakamoto, Yuichi, Nakamura, Shogo, Michiue, Tatsuo, Sakai, Shin-ichi, Hexig, Bayar, Akaike, Toshihiro, Ohnuma, Kiyoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

290

1D1412 Measurements of Single Cell Dynamics upon Stimulation with a Differentiation Factor Using Raman Micro-Spectroscopy(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Takanezawa, Sota, Morita, Shin-ichi, Ozaki, Yukihiro, Sako, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

291

1D14241 Quantitative measurement and mathematical modeling of polarity-protein PAR-2 in C. elegans embryos(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Arata, Yukinobu, Kobayashi, Tetsuya, Hiroshima, Michio, Pack, Chan-gi, Tachikawa, Masashi, Nakazato, Kenichi, Shibata, Tatsuo, Sako, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

292

1D1436 Estimating forces in the growing epithelial tissues(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ishihara, Shuji, Sugimura, Kaoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

293

1D1510 A model of cell-division stop for the limb regeneration(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshida, Hiroshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

294

1D1522 Analysis of functional molecules underlying synchronous activity during long-term development of rat cultured neuronal networks(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ito, Daisuke, Yokoyama, Keiko, Gohara, Kazutoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

295

1D1546 Assembling dynamics of optically trapped synaptic vesicles in neuronal cell(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ueda, Yusuke, Kudoh, Suguru N., Taguchi, Takahisa, Hosokawa, Chie

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

296

1E1400 Free energy profile for binding of ADP to Hsp90 with molecular dynamics simulation(Proteins: Property I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kawaguchi, Kazutomo, Takagi, Hiroyuki, Iwayama, Masashi, Nishimura, Megumi, Saito, Hiroaki, Nagao, Hidemi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

297

1E1424 Investigation of initial assembling process of fibrillation by small angle X-ray scattering(Proteins: Property I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Chatani, Eri, Inoue, Rintaro, Nishida, Koji, Kanaya, Toshiji, Yamamoto, Masahide

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

298

1E1448 A method to prepare cell extract near intracellular concentration without additional salts and buffers(Proteins: Property I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Fujiwara, Kei, Nomura, Shin-ichiro M.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

299

1E1510 Three-Dimensional Imaging of the Protein Transfer Free Energy into the Molecular Crowding Condition with TMAO(Proteins: Property I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yu, Isseki, Nakada, Kyoko, Nagaoka, Masataka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

300

1E1558 Hydration Properties of Alkyl Carboxylate Series by Dielectric Relaxation Spectroscopy(Proteins: Property I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Wang, Yangtian, Mogami, George, Wazawa, Tetsuichi, Morimoto, Nobuyuki, Suzuki, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 401 KB

english, 2012

301

1F1400 ATR-FTIR study of monkey green-sensitive visual pigment(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Katayama, Kota, Furutani, Yuji, Imai, Hiroo, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

302

1F1412 SAXS measurements of purified octopus rhodopsin(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Watanabe, Shingo, Hirai, Mitsuhiro, Iwasa, Tatsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

303

1F1424 Comparative analysis of transducin activation by rhodopsin and cone pigments in nanodiscs(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kojima, Keiichi, Maeda, Ryo, Imamoto, Yasushi, Yamashita, Takahiro, Shichida, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

304

1F1436 Analysis of the molecular properties of vertebrate non-visual opsins, Opn5 and Opn5-like protein(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamashita, Takahiro, Ohuchi, Hideyo, Tomonari, Sayuri, Fujita-Yanagibayashi, Sari, Sakai, Kazumi, Noji, Sumihare, Shichida, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

305

1F1448 Spectroscopic study of photoreaction dynamics of Groeobacter rhodopsin(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nagata, Kumiko, Inoue, Keiichi, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

306

1SB-05 Softness of the artificial cell niche and its active interplay of forces(1SB Body-cell dynamic linkage: softness, flexibility, fluctuation and controllability,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Shimizu, Miho, Katsurada, Yuki, Watanabe, Toshiyuki, Fujita, Eri, Atomi, Tomoaki, Hirose, Noboru, Hasegawa, Katsuya, Atomi, Yoriko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 394 KB

english, 2012

307

1F1546 Effect of potential on the photo reaction of Sensory rhodopsin II monolayer studied by Surface Enhanced IR absorption Spectroscopy(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ataka, Kenichi, Heberle, Joachim

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

308

1G1412 Transient GPI-anchored protein homodimers are units for raft organization and function(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Suzuki, Kenichi G. N., Kasai, Rinshi S., Hirosawa, Koichiro M., Nemoto, Yuri L., Ishibashi, Munenori, Miwa, Yoshihiro, Fujiwara, Takahiro K., Kusumi, Akihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

309

1G1436 Simulation study on Golgi reassembly process based on elastic membrane model(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tachikawa, Masashi, Mochizuki, Atsushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

310

1G1448 Analysis of cell behavior near silicon based micro-scale pore(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Otsuka, Yo, Murakami, Shinya, Sugimoto, Manabu, Mitsui, Toshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

311

1G1546 Nuclear translocation analysis of glucocorticoid receptor by spatiotemporal analysis with multipoint fluorescence correlation spectroscopy(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Johtaro, Kinjo, Masataka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

312

1G1558 Correlation between the molecular conformation and EGF response of RAF by FRET imaging in individual cells(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hibino, Kayo, Ueda, Masahiro, Sako, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

313

1H1412 Non-invasive in vivo imaging of vesicle movement in neutrophils in mouse ear(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kikushima, Kenji, Kita, Sayaka, Higuchi, Hideo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

314

1H1436 Single molecule imaging of guanine nucleotide exchange factor Sos in living cells(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

315

1H1522 High-speed AFM observation of intrinsically disordered proteins (NTAIL-GFP, PNT-GFP and SIC1-GFP)(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Dora, Sujit Kumar, Kodera, Noriyuki, Bloquel, David, Habchi, Johnny, Gruet, Antoine, Longhi, Sonia, Ando, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

316

1H1546 Development of the 500kV Linac TEM(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nagatani, Yukinori, Arai, Yoshihiro, Sannomiya, Takumi, Shirai, Tadao, Aihara, Ryuzo, Iijima, Giichi, Nagayama, Kuniaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

317

1H1558 Multimodal cellular imaging with light microscopy and cathodoluminescence microscopy(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Niioka, Hirohiko, Furukawa, Taichi, Ichimiya, Masayoshi, Nagata, Tomohiro, Ashida, Masaaki, Araki, Tsutomu, Hashimoto, Mamoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

318

1I1436 Computational analysis of protean segments (ProSs) in intrinsically disordered proteins (IDPs)(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Shaji, Divya, Amemiya, Takayuki, Fukuchi, Satoshi, Ota, Motonori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

319

1I1546 Observation of parasite invasion with the micro-fabricated device(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Teshima, Tetsuhiko, Onoe, Hiroaki, Kuribayashi-Shigetomi, Kaori, Aonuma, Hiroka, Kanuka, Hirotaka, Takeuchi, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

320

1I1610 Spatiotemporal control of cell motility in nano- to micro-scale topographical environment(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Miyoshi, Hiromi, Aoki, Hiroyoshi, Ju, Jungmyoung, Lee, Sang Min, Ko, Jong Soo, Yamagata, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 63 KB

english, 2012

321

2A1424 Elucidation of Axoneme architecture by cryo-electron microscopy and metallothionein labeling(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Chijimatsu, Reiko, Jin, Mingyue, Yasunaga, Takuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

322

2A1448 Nucleotide-dependent morphological change of cytoplasmic dynein(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ichikawa, Muneyoshi, Saito, Kei, Torisawa, Takayuki, Shibata, Keitaro, Watanabe, Yuta, Hata, Tomonori, Toyoshima, Yoko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

323

2A1510 A direct interaction between dynein two heads is not necessary for processive movements of dynein(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Shibata, Keitaro, Utsumi, Yui, Torisawa, Takayuki, Toyoshima, Yoko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

324

2A1558 The dynamic change of the distribution of cytoplasmic dynein during skeletal muscle differentiation process(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kobayashi, Takuya, Kaya, Motoshi, Higuchi, Hideo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

325

1SB-07 Physiological functions of an actin filament based on its fluctuation(1SB Body-cell dynamic linkage: softness, flexibility, fluctuation and controllability,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

326

1SB-08 Multidimensional Approaches to the Secrets of Life(1SB Body-cell dynamic linkage: softness, flexibility, fluctuation and controllability,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Takemori, Shigeru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

327

1SC-02 Collective dynamics of flocking(1SC Frontiers in mathematical methods in biology,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Hayakawa, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

328

1SC-04 Mathematical analysis of dynamical robustness in biological networks(1SC Frontiers in mathematical methods in biology,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Tanaka, Gouhei, Morino, Kai, Aihara, Kazuyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 395 KB

english, 2012

329

2B1400 Improvement of the Single Amino Acid Potential Force Field and the Application to Structure Prediction of Short Peptides(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Iwaoka, Michio, Dedachi, Kenichi, Shimosato, Taku, Minezaki, Toshiya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

330

2B1412 Path sampling for small peptide systems using the Onsager-Machlup action method(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Fujisaki, Hiroshi, Matsunaga, Yasuhiro, Kidera, Akinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

331

2B1424 Relaxation mode analysis for simulations of protein systems(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Mitsutake, Ayori, Nagai, Toshiki, Takano, Hiroshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

332

2B1436 A multi-body potential for normal mode analysis of protein structure(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Dasgupta, Bhaskar, Kamiya, Narutoshi, Nakamura, Haruki, Kinjo, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

333

2B1448 A theoretical model of cooperative binding of cofilin to actin filaments(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sakakibara, Shotaro, Hayakawa, Kimihide, Tatsumi, Hitoshi, Sokabe, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

334

2B1522 Effects of raft components on the membrane-mediated aggregation of IAPP(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sasahara, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

335

2B1558 A mechanism controlling the morphologies of protein aggregates by "post-aggregation oxidation"(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Mitomi, Yasushi, Nomura, Takao, Kurosawa, Masaru, Nukina, Nobuyuki, Furukawa, Yoshiaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

336

2C1412 Single-particle-level simulation reveals effects of molecular crowding on biochemical signaling response(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kaizu, Kazunari, Takahashi, Koichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

337

2C1424 Conflicted dissociation constant in two reaction mechanisms for heat shock response(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Inoue, Masayo, Trusina, Ala, Mitarai, Namiko, Sneppen, Kim

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

338

2C1448 Modeling wave propagation dynamics in MDCK wound healing assay(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sawabu, Yusuke, Nagayama, Masaharu, Miura, Takashi, Kitahata, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

339

2C1534 Determining the ratio of longitudinal to transverse conductivity in a cardiac tissue culture through application of FFP(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hoerning, Marcel, Tagaki, Seiji, Yoshikawa, Kenichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

340

2C1546 Mathematical model of Cl^- secretion in airway epithelial cells(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sasamoto, Kouhei, Niisato, Naomi, Marunaka, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

341

2D1412 Super-resolution cryo-electron tomography(Measurements,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Azuma, Ryuzo, Yasunaga, Takuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

342

2D1424 Label-free and video-rate imaging of live cell membrane motion in the nanometer-scale by quantitative phase microscope(Measurements,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamauchi, Toyohiko, Sakurai, Takashi, Iwai, Hidenao, Yamashita, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

343

2D1510 Evaluation of temporal fluctuation and spatial fluctuation on cardiomyocyte network for in vitro predictive cardiotoxicity measurement(Measurements,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hamada, Tomoyo, Nomura, Fumimasa, Kaneko, Tomoyuki, Yasuda, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

344

2D1522 Cryogenic Coherent X-ray Diffraction Imaging of non-crystalline particles at SACLA(Measurements,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nakasako, Masayoshi, Takayama, Yuki, Oroguchi, Tomotaka, Sekiguchi, Yuki, Yamamoto, Masaki, Yonekura, Koji, Hikima, Takaaki, Maki-Yonekura, Saori, Takahashi, Yukio, Suzuki, Akihiro, Matsunaga, Sachihi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 396 KB

english, 2012

345

2D1534 A protocol for structure analysis of non-crystalline particles with X-ray free electron laser(Measurements,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Oroguchi, Tomotaka, Nakasako, Masayoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

346

2E1412 Single-molecule structural analysis of tumor suppressor p53 using scanning probe microscopes(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Takahashi, Seiya, Sainoo, Yasuyuki, Kashima, Risa, Tokino, Takashi, Komeda, Tadahiro, Takahashi, Satoshi, Kamagata, Kiyoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

347

2E1522 Cavity-dependent dynamics of c-Myb R2R3 revealed by high-pressure fluorescence and NMR spectroscopy(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Inaba, Satomi, Maeno, Akihiro, Morii, Hisayuki, Fukada, Harumi, Akasaka, Kazuyuki, Oda, Masayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

348

2E1558 Protein specific partial charges by Ab-initio fragment molecular orbital method for more accurate protein simulations(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Chang, Le, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

349

2F1424 Analysis of interaction sites on the Photoactive Yellow Protein of Rhodobacter capsulatus with chimeric proteins(Photobiology:Vision & Photoreception II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Shimad, Mayu, Yamazaki, Yoichi, Kamikubo, Hironari, Yamaguchi, Mariko, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

350

2F1448 Construction of LOV-based redox-sensitive fluorescent proteins(Photobiology:Vision & Photoreception II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ono, Yukiko, Iwata, Tatsuya, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

351

2F1510 Time-resolved study on photoreaction dynamics of full-length phototropin from Chlamydomonas reinhardtii(Photobiology:Vision & Photoreception II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nakasone, Yusuke, Okajima, Koji, Aihara, Yusuke, Nagatani, Akira, Tokutomi, Satoru, Terazima, Masahide

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 198 KB

2012

352

2F1522 N-Terminal Truncation Does Not Affect the Location of a Conserved Tryptophan in the BLUF Domain of AppA from Rhodobacter sphaeroide(Photobiology:Vision & Photoreception II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Unno, Masashi, Tsukiji, Yuuki, Kubota, Kenshuke, Masuda, Shinji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 393 KB

english, 2012

353

2G1400 Morphology change of fusion stalk studied by molecular dynamics simulation(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kawamoto, Shuhei, Shinoda, Wataru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

354

1SC-05 Homeostasis and memory by autonomous regulation of time-scales through enzyme abundances(1SC Frontiers in mathematical methods in biology,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kaneko, Kunihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

355

1SD-02 The mechanism of nuclear protein searching on DNA : Coarse-Grained simulation study(1SD Molecular Dynamics in the Nucleus and Gene Regulation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Terakawa, Tsuyoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

356

2G1424 Single Giant Unilamellar Vesicle Method Reveals Lysenin-Induced Pore Formation in Lipid Membranes Containing Sphingomyelin(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Alain, Jahangir Md., Kobayashi, Toshihide, Yamazaki, Masahito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

357

2G1448 Regulation of Kesl sterol transport activity by PI4P and lipid membrane curvature(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yokoyama, Hirokazu, Wakabayashi, Masaki, Ishihama, Yasushi, Nakano, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

358

2G1522 Photo-controlled ion conductive rectification element using gel, amino acids and hydrogenated amorphous silicon film(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ichikawa, Takaaki, Suzuki, Hiroki, Matsueda, Ryohei, Masumoto, Hiroshi, Goto, Takashi, Tsujiuchi, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 392 KB

english, 2012

359

2G1610 The Vibrational Analysis of the Selectivity Filter of KcsA by using ATR-FTIR Spectroscopy(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Furutani, Yuji, Shimizu, Hirofumi, Asai, Yusuke, Fukuda, Tetsuya, Oiki, Shigetoshi, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

360

2H1400 Dynamics of cardiomyopathy-causing mutant of troponin observed by neutron scattering(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Matsuo, Tatsuhito, Natali, Francesca, Zaccai, Giuseppe, Fujiwara, Satoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

361

2H1412 Structural dynamics of actin, tropomyosin, and troponin in the thin filament as studied by distance measurements using spin-labeling ESR(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ueda, Keisuke, Zhao, Chenchao, Yamamoto, Akie, Somiya, Takayasu, Aihara, Tomoki, Ueki, Shoji, Miki, Masao, Arata, Toshiaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 391 KB

english, 2012

362

2H1424 Formation of hyper-mobile water around actin and its thermodunamic considerations(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Suzuki, Makoto, Mogami, George, Wazawa, Tetsuichi, Imao, Asato, Ishida, Noriyoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

363

2H1546 Auto-oscillation (SPOC) properties of sarcomeres in rat neonetal cardiomyocytes(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Shintani, Seine, Oyama, Kotaro, Fukuda, Norio, Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

364

2H1610 Simultaneous ultrafast X-ray recordings of actions of two antagonistic flight muscles during wingbeat of live bumblebee(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Iwamoto, Hiroyuki, Yagi, Naoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

365

2I1400 A novel gene of dnaJ family plays a role in the suppression of flagellation in Vibrio alginolyticus(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nishigaki, Takehiko, Kitaoka, Maya, Ihara, Kunio, Nishioka, Noriko, Kojima, Seiji, Honma, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

366

2I1412 Unbinding Dynamics of Type IV Pill(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sumi, Tomonari, Marathe, Rahul, Klumpp, Stefan

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

367

2I1424 Role of the C-terminal a-helix of FliT chaperone in the export of its cognate substrate FliD(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Minamino, Tohru, Kinoshita, Miki, Hara, Noritaka, Imada, Katsumi, Namba, Keiichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

368

2I1436 Effect of Flil ATPase on local pH around the bacterial flagellar protein export apparatus(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Morimoto, Yusuke V., Kami-ike, Nobunori, Miyata, Tomoko, Namba, Keiichi, Minamino, Tohru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

369

2I1448 Characterization of cytoplasmic loop of PomA, Na^+-driven flagellar stator protein, using differential scanning calorimetry(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kobayashi, Shiori, Abe-Yoshizumi, Rei, Gohara, Mizuki, Kojima, Seiji, Homma, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

370

2I1522 Analysis of interactions between rotor proteins of flagellar motor using Fluorescence Correlation Spectroscopy(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kishi, Takaaki, Kojima, Seiji, Homma, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 394 KB

english, 2012

371

2I1546 Measurement of cellular response of single E. coli to the photoreleased serine(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sagawa, Takashi, Fukuoka, Hajime, Inoue, Yuichi, Takahashi, Hiroto, Muraoka, Takahiro, Kinbara, Kazushi, Isjijima, Akihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

372

2I1610 Effect of gamma ray irradiation on the swimming speed of Escherichia coil(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Fujimoto, Eriko, Furuta, Masakazu, Atsumi, Tatsuo, Kato, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

373

3A0912 Motions in F_1-ATPase and ciliary axonemes that drive functions(Molecular Motors III:F1 ATPase and Mycoplasma,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Masaike, Tomoko, Ikegami, Koji, Nakayama, Rinako, Setou, Mitsutoshi, Nishizaka, Takayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

374

3A0924 Detection of rotation of F1-ATPase using high-speed orientational detection of gold nanorod(Molecular Motors III:F1 ATPase and Mycoplasma,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Enoki, Sawako, Iino, Ryota, Noji, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

375

3A0936 Characterization of UTP driven rotation of F1-ATPase(Molecular Motors III:F1 ATPase and Mycoplasma,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Arai, Hidenobu, Watanabe, Rikiya, Noji, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

376

3A0948 Single Molecule Analysis of Inhibitory Pausing States of V_1-ATPase(Molecular Motors III:F1 ATPase and Mycoplasma,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tirtom, Naciye Esma, Nishikawa, Yoshihiro, Okuno, Daichi, Nakano, Masahiro, Yokoyama, Ken, Noji, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

377

3A1010 The role of DELSEED loop in torque-transmission of F_1-ATPase(Molecular Motors III:F1 ATPase and Mycoplasma,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Koyasu, Kazuma, Watanabe, Rikiya, Tanigawara, Mizue, Noji, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

378

3A1034 UNBINDING FORCE MEASUREMENTS OF THE SHAFT FROM THE CYLINDER OF F1-ATPase(Molecular Motors III:F1 ATPase and Mycoplasma,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Naito, Tatsuya, Okada, Kaoru, Masaike, Tomoko, Nishizaka, Takayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

379

3B0924 Dynamic structural and antigen binding analyses of antibody single-chain Fvs(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tanaka, Yusuke, Sekiguchi, Hiroshi, Sasaki, Yuji C., Azuma, Takachika, Oda, Masayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

380

3B0948 Inhibition of actomyosin contractility by α-catenin, a component of adherens junctions(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ishii, Shuya, Ohki, Takashi, Kubota, Hiroaki, Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

381

3B1010 Molecular dynamics simulations of dynein motor domain in explicit water(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kamiya, Narutoshi, Mashimo, Tadaaki, Takano, Yu, Kon, Takahide, Kurisu, Genji, Nakamura, Haruki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

382

3B1022 A computational Investigation into the MHC-I Recognition Mechanism of MIR2 from Kaposi's Sarcoma-Associated Herpesvirus(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Li, Pai-Chi, Miyashita, Naoyuki, Ishido, Satoshi, Sugita, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

383

3B1058 Autodephosphorylation of cyanobacterial circadian clock protein KaiC occurs via formation of ATP as an intermediate(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ohkawa-Nishiwaki, Taeko, Kondo, Takao

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

384

1SE-02 Dynamic mechanism for the transcription when responses to activators(1SE Conformational dynamics: Folding to function,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Wang, Yaolai, Liu, Feng, Wang, Wei

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

385

1SE-05 Folding and conformational dynamics of multi-domain proteins(1SE Conformational dynamics: Folding to function,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 389 KB

english, 2012

386

3C0912 Hybridization Rates of DNA Strands with Unstable Self-folded Secondary Structures(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hata, Hiroaki, Suyama, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

387

3C1010 A structural basis for the antibiotic resistance conferred by an A1408G mutation in 16S rRNA(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

388

3C1046 Single-molecule visualization of a non-hexameric helicase reveals active roles of its oligomeric forms in DNA unwinding(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yokota, Hiroaki, Harada, Yoshie

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

389

3C1110 The probability of double-strand breaks in genome-sized DNA decreases markedly as the DNA concentration increases(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Shimobayashi, Shunsuke, Iwaki, Takafumi, Mori, Toshiaki, Yoshikawa, Kenichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

390

3D0900 Determine the location of protons surrounding Mn cluster of PS II by proton matrix ENDOR using oriented PS II membrane(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nagashima, Hiroki, Mino, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

391

3D0936 Improvement of variational master equation describing excitation energy transfer, and its application to PSII(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Fujihashi, Yuta, Kimura, Akihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

392

3D1034 Mechanism of controlling the redox potentials of the quinone electron acceptors in photosystem II(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ashizawa, Ryota, Iwasa, Takuya, Sugiura, Miwa, Noguchi, Takumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

393

3E0912 Visualizing hydrogens and outer-shell electrons of NADH cytochrome b_5 reductase by ultra-high resolution crystallography(Proteins:Structure,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Takaba, Kiyofumi, Takeda, Kazuki, Kosugi, Masayuki, Tamada, Taro, Kuroki, Ryota, Miki, Kunio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

394

3E0924 Silk Structure studied by Newly-developed Solid-state NMR(Proteins:Structure,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Okushita, Keiko, Yazawa, Koji, Aoki, Akihiro, Asakura, Tetsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

395

3E0936 Interaction of human calcitonin with curcumin as an inhibitor of fibrillation as revealed by NMR and docking simulation(Proteins:Structure,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Takeuchi, Ken, Watanabe, Hikari, Namsrai, Javkhlantugs, Hirota, Hiroshi, Naito, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

396

3E0948 8-A^^○ structure of sapovirus capsid by single particle electron cryomicroscopy(Proteins:Structure,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Miyazaki, Naoyuki, Taylor, David, Houseman, Grant, Murakami, Kosuke, Nagayama, Kuniaki, Katayama, Kazuhiko, Murata, Kazuyoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

397

3E1022 Direct electron microscopy of protein crystals and Mvconlasma cells in solution using the Atmosnheric SEM(Proteins:Structure,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Maruyama, Yuusuke, Ebihara, Tatsuhiko, Nakane, Daisuke, Nishiyama, Hidetoshi, Nishizaka, Takayuki, Senda, Miki, Mio, Kazuhiro, Suga, Mitsuo, Senda, Toshiya, Miyata, Makoto, Sato, Chikara

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

398

3F0900 Evaluation of ion-pump activity of membrane proteins reconstituted on supported membrane under optical microscope(Membrane Proteins,Oral Presentation)

Ki, Jyunan, Watanabe, Rikiya, Tabata, Kazuhito, Noji, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

399

3F0912 Catalytic activity of MsbA reconstituted in nanodisc particles is modulated by remote interactions with the bilayer(Membrane Proteins,Oral Presentation)

Kawai, Takeaki, Caaveiro, Jose, Katagiri, Toyomasa, Tadakuma, Hisashi, Ueda, Takuya, Tsumoto, Kouhei

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

400

3F0924 Isolation and characterization of C. elegans innexin-6 gap junction channels(Membrane Proteins,Oral Presentation)

Oshima, Atsunori, Matsuzawa, Tomohiro, Nishikawa, Kouki, Fujiyoshi, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

401

3F0936 Cation-induced structural changes in the WT and non-inactivating mutant KcsA studied by ATR-FTIR(Membrane Proteins,Oral Presentation)

Muramatsu, Chikako, Iwaki, Masayo, Fukuda, Tetsuya, Asai, Yusuke, Furutani, Yuji, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

402

3F0948 Molecular basis of staphylococcal bi-component pore forming toxin(Membrane Proteins,Oral Presentation)

Tanaka, Yoshikazu, Yamashita, Daichi, Yamashita, Keitaro, Kawai, Yuka, Kaneko, Jun, Tomita, Noriko, Ohta, Makoto, Kamio, Yoshiyuki, Yao, Min, Tanaka, Isao

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

403

3F1010 Structure and lateral pressure profile of lipid bilayer containing gramicidin A by molecular dynamics simulation(Membrane Proteins,Oral Presentation)

Saito, Hiroaki, Iwayama, Masashi, Nishimura, Megumi, Takagi, Hiroyuki, Kawaguchi, Kazutomo, Nagao, Hidemi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

404

3G0912 Effects of model peptides for late embryogenesis abundant (LEA) proteins on the thermal properties of liposomes(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Furuki, Takao, Sakurai, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

405

3G0924 Spatially controlled accumulation of membrane-bound protein in a micro-patterned model biological membrane(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Okada, Fumiko, Morigaki, Kenichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

406

3G0936 An attempt to reveal the relaxation behavior of dimyristoylphosphatidyicholine bilayer by pressure perturbation calorimetry(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Tamai, Nobutake, Kakibe, Sayuri, Tanaka, Saeko, Goto, Masaki, Matsuki, Hitoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

407

3G0948 Pressure-induced interdigitation of phospholipid bilayer membranes : dependence of acyl-chain length and limitation of the formation(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Matsuki, Hitoshi, Goto, Masaki, Tamai, Nobutake

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

408

3G1010 Collapse of nonuniform phospholipid monolayers(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Hibino, Masahiro, Hashimoto, Ken, Fujisawa, Takuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

409

3G1022 Charge-induced transition in membrane mesoscopic structures : lateral domains and vesicular shapes(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Himeno, Hiroki, Hamada, Tsutomu, Takagi, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

410

1SF-01 Deformation and motion of cell : theoretical and experimental challenges(1SF Theoretical Approaches to Biological Motion and Deformation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

411

1SF-03 Synchronization of flagella and cilia by hydrodynamic interactions : minimal approach(1SF Theoretical Approaches to Biological Motion and Deformation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Uchida, Nariya, Golestanian, Ramin

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

412

3H0924 Resurrection of flagellar bending movements in chlamydomonas paralyzed mutants at high pressure(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Yagi, Toshiki, Nishiyama, Masayoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

413

3H0936 Directed cell migration induced by travelling waves of chemoattractant(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Nakajima, Akihiko, Sawai, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

414

3H1010 Controlled cell migration with ultrasound(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Murakami, Shinya, Otsuka, Yo, Sugimoto, Manabu, Mitsui, Toshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

415

3H1022 Contractile properties of stress fibers are distinct from those of muscles(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Deguchi, Shinji, Matsui, Tsubasa, Komatsu, Daiki, Sato, Masaaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

416

3H1046 A distinct role for the dynamics of p130Cas at focal adhesion via interaction with Src in the regulation of cell migration(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Machiyama, Hiroaki, Hirata, Hiroaki, Sawada, Yasuhiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

417

3H1110 Filopodia-like protrusions in water-in-oil droplets induced by Arp2/3 and actin polymerization(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Chiba, Masataka, Miyazaki, Makito, Ohki, Takashi, Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

418

3I0912 A realistic picture of allosteric equilibrium of hemoglobin(Heme Proteins,Oral Presentation)

Shibayama, Naoya, Park, Sam-Yong

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

419

3I0936 Protein motions and CO migration following CO photolysis in heme oxygenase(Heme Proteins,Oral Presentation)

Sugishima, Masakazu, Moffat, Keith, Noguchi, Masato

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

420

3I1010 Ultraviolet Resonance Raman Study on Indoleamine 2, 3-Dioxygenase(Heme Proteins,Oral Presentation)

Hara, Masayuki, Yanagisawa, Sachiko, Sugimoto, Hiroshi, Shiro, Yoshitsugu, Ogura, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

421

3I1058 Functional Implications from Structural Characterization of CN-bound Nitric Oxide Reductase(Heme Proteins,Oral Presentation)

Tosha, Takehiko, Sato, Nozomi, Okada, Norihiro, Sugimoto, Hiroshi, Shiro, Yoshitsugu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 120 KB

english, 2012

422

1PS001 Changes of biochemical properties of Dictyostelium actin induced by mutation of tyrosine-143(The 50th Annual Meeting of the Biophysical Society of Japan)

Gomibuchi, Yuki, Uyeda, Taro, Wakabayashi, Takeyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

423

1PS004 Effects of halide ions on the hydration properties of F-actin(The 50th Annual Meeting of the Biophysical Society of Japan)

Ishida, Noriyoshi, Imao, Asato, Okazaki, Yuichiro, Wazawa, Tetsuichi, Mogami, George, Suzuki, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

424

1PS008 Approach to higher-resolution structure of actin-myosin rigor complex by electron cryo-microscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Shimizu, Norihiro, Tsukada, Yoshihiro, Yasunaga, Yakuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

425

1PS010 Optogenetic manipulation of myogenic contraction and maturation in channelrhodopsin-expressing skeletal muscle myotubes(The 50th Annual Meeting of the Biophysical Society of Japan)

Asano, Toshifumi, Ishizuka, Toru, Yawo, Hiromu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

426

1PS013 Sequential analysis of Planarian connectin-like protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Sasano, Kouhei, Kurasawa, Masayoshi, Hanashima, Akira, Bao, Yulong, Nakauchi, Yuni, Kimura, Sumiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

427

1PS015 Independent formation of actin filament with two actin species with different sliding velocities(The 50th Annual Meeting of the Biophysical Society of Japan)

Kinoshita, Syunsuke, Iwase, Kouhei, Honda, Hajime

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

428

1PS016 The effects of disease and aging on human myocardial SPOC(The 50th Annual Meeting of the Biophysical Society of Japan)

Kagemoto, Tatsuya, Yamane, Mitsunori, Remedios, Cristobal G. Dos, Fukuda, Norio, Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

429

1PS018 Force transmission and anisotropic stiffening of reconstituted cytoskeletons(The 50th Annual Meeting of the Biophysical Society of Japan)

Head, David, Ikebe, Emi, Nakamasu, Akiko, Zhang, Peijuan, Ando, Shoji, Mizuno, Daisuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

430

1PS019 Theoretical Analysis of α-Actin Stability at High Pressure(The 50th Annual Meeting of the Biophysical Society of Japan)

Wakai, Nobuhiko, Takemura, Kazuhiro, Morita, Takami, Kitao, Akio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

431

1PS023 Effect of nucleotide structure on nucleotide binding and rotation of F_1-ATPase(The 50th Annual Meeting of the Biophysical Society of Japan)

Kikuchi, Yohsuke, Masaike, Tomoko, Toyabe, Shoichi, Ueno, Hiroshi, Muneyuki, Eiroh

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

432

1PS027 H^+/ATP ratio of F_OF_1-ATP synthase from the thermophilic Bacillus PS3(The 50th Annual Meeting of the Biophysical Society of Japan)

Soga, Naoki, Kimura, Kazuya, Kasuya, Yuzo, Suzuki, Toshiharu, Yoshida, Masasuke, Kinosita, Kazuhiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

433

1PS028 Application of New step finding algorithm to F_1-ATpase(The 50th Annual Meeting of the Biophysical Society of Japan)

Seino, Akihiko, Nakagawa, Takeshi, Sasaki, Kazuo, Hayashi, Kumiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

434

1PS029 Giant Acceleration of diffusion in single-molecule experiments(The 50th Annual Meeting of the Biophysical Society of Japan)

Hayashi, Ryunosuke, Nakamura, Syuichi, Kudo, Seishi, Sasaki, Kazuo, Noji, Hiroyuki, Hayashi, Kumiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

435

1PS032 Simultaneous observation of fluorescent-nucleotides and rotation of rotary molecular motor on plasmonic metal nanostructures(The 50th Annual Meeting of the Biophysical Society of Japan)

Ueno, Hiroshi, Toyabe, Shoichi, Muneyuki, Eiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

436

1SH-01 Structure and Molecular Function of Halorhodopsin(1SH Retinal proteins and optgenetics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

437

1SH-02 Structural basis for light-gated cation conductance by channelrhodopsin(1SH Retinal proteins and optgenetics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Nureki, Osamu, Ishitani, Ryuichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

438

1SH-05 Evolution and functional diversity of animal opsin-based pigments(1SH Retinal proteins and optgenetics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Terakita, Akihisa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

439

1PS035 Single-molecule analyses of the rotation and regulation of human F1-ATPase(The 50th Annual Meeting of the Biophysical Society of Japan)

Suzuki, Toshiharu, Tanaka, Kazumi, Wakabayashi, Chiaki, Saita, Eiichiro, Furuike, Shou, Kinosita Jr, Kazuhiko, Yoshida, Masasuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

440

1PS039 The role of electrostatic interaction in binding-site selectivity of KIF1A on microtubule(The 50th Annual Meeting of the Biophysical Society of Japan)

Mizuhara, Yukinobu, Yamamoto, Kyohei, Narita, Jun, Takano, Mitsunori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

441

1PS044 Photo-regulation of kinesin Kif18A using photochromic inhibitor(The 50th Annual Meeting of the Biophysical Society of Japan)

Seo, Hideo, Ishikawa, Kumiko, Touyama, Kanako

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 395 KB

english, 2012

442

1PS045 RAD54, A CHROMATIN REMODELER, TRANSLOCATES ALONG DNA BY TRACKING THE DNA HELIX(The 50th Annual Meeting of the Biophysical Society of Japan)

Amitani, Ichiro, Dombrowski, Christopher, Baskin, Ronald, Kowalczykowski, Stephen

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

443

1PS046 Structural dynamics of RecBCD enzyme during DNA degradation processes studied by high-speed atomic force microscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Moriguchi, Yusuke, Handa, Naofumi, Kodera, Noriyuki, Ando, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

444

1PS047 Expression of recombinant beta-actin in the high-density insect cell culture(The 50th Annual Meeting of the Biophysical Society of Japan)

Ohki, Takashi, Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

445

1PS050 Construction of statistical method for estimating elementary processes and their characteristics(The 50th Annual Meeting of the Biophysical Society of Japan)

Tanaka, Hiroto, Kojima, Hiroaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 401 KB

english, 2012

446

1PS051 Photo-control of microtubule flexibility using photochromic nucleotide analogue entrapped within GTP binding site of tubulin(The 50th Annual Meeting of the Biophysical Society of Japan)

Furutani-Umezu, Nozomi, Itaba, Takeshi, Maruta, Shinsaku

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

447

1PS052 Possible application of photochromic nucleotide analogue to the nucleotide required blo-molecular machines(The 50th Annual Meeting of the Biophysical Society of Japan)

Itaba, Takeshi, Maruta, Shinsaku

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

448

1PT002 Density fluctuation of water around myosin(The 50th Annual Meeting of the Biophysical Society of Japan)

Sato, Takato, Ohnuki, Jun, Umezawa, Koji, Takano, Mitsunori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

449

1PT003 Dynamics of Water around F-actin in Solution Studied by Neutron Scattering(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujiwara, Satoru, Plazanet, Marie, Oda, Toshiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

450

1PT007 Calculation of dynamics and charges of water around small solute molecules : MD and QM calculations(The 50th Annual Meeting of the Biophysical Society of Japan)

Takahashi, Takuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

451

1PT008 Investigation of force field parameter effect on solvation dynamics(The 50th Annual Meeting of the Biophysical Society of Japan)

Kondo, Yoshito, Takahashi, Takuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

452

1PT011 Thermodynamics and mechanism of transfer of ATP, ADP and Pi from aqueous solution to fatty acid amine/octanol solvent(The 50th Annual Meeting of the Biophysical Society of Japan)

Komatsu, Hideyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

453

1PT103 Mechanism of ATP binding and channel activation in P2X receptors(The 50th Annual Meeting of the Biophysical Society of Japan)

Hattori, Motoyuki, Gouaux, Eric

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

454

1PT107 Unique structural changes in calcium-bound calmodulin upon interaction with a peptide of protein 4.1R(The 50th Annual Meeting of the Biophysical Society of Japan)

Nunomura, Wataru, Isozumi, Yuichi, Nakamura, Shigeyoshi, Ohki, Shinya, Kidokoro, Shun-Ichi, Takakuwa, Yuichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

455

1PT109 How do β-strands determine their positions in β-sheets?(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

456

1PT110 Structural investigation of the yeast 26S proteasome in an aqueous solution by a small-angle X-ray scattering(The 50th Annual Meeting of the Biophysical Society of Japan)

Morita, Yuya, Matsumoto, Takashi, Yamano, Akihito, Morimoto, Yukio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

457

1PT112 Solution stucture of the alternatively folded state of ubiquitin(The 50th Annual Meeting of the Biophysical Society of Japan)

Kitazawa, Soichiro, Kameda, Tomoshi, Yagi, Maho, Sugase, Kenji, Baxter, Nicky, Kato, Koichi, Williamson, Michael P., Kitahara, Ryo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

458

1PT118 Structural visualization of supramolecules in bacterial and eukaryotic cells using STEM tomography(The 50th Annual Meeting of the Biophysical Society of Japan)

Koike, Masafumi J., Minakata, Shiho, Narita, Akihiro, Homma, Michio, Usukura, Jiro, Maeda, Yuichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

459

1PT120 Residues contributing to the stability of bovine β lactoglobulin elucidated by comparing with a chimera protein, Gyuba(The 50th Annual Meeting of the Biophysical Society of Japan)

Imaizumi, Ryo, Ohtomo, Hideaki, Ikeguchi, Masamichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

460

1PT121 X-ray crystallographic analysis of a chemoreceptor protein of Vibrio cholerae, Mlp24(The 50th Annual Meeting of the Biophysical Society of Japan)

Sumita, Kazumasa, Utida, Yumiko, Nishiyama, So-ichiro, Kawagishi, Ikuro, Imada, Katsumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

461

1PT122 Structural change of the clock protein KaiB on the formation of the KaiABC clock oscillator complex(The 50th Annual Meeting of the Biophysical Society of Japan)

Tajika, Ryosuke, Mutoh, Risa, Mino, Hiroyuki, Ishiura, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

462

1PT123 Phenylalanine residues of the N-terminus region play a crucial role in regulating chaperone activity of SpHspl6.0 from fission yeast(The 50th Annual Meeting of the Biophysical Society of Japan)

Hanazono, Yuya, Aikawa, Yoshiki, Akiyama, Nobuhiko, Abe, Tetsuya, Takeda, Kazuki, Oka, Toshihiko, Yohda, Masafumi, Miki, Kunio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

463

1PT125 Athermal Fluctuations in Active Cytoskeletal Networks Follow Truncated Levy Distribution(The 50th Annual Meeting of the Biophysical Society of Japan)

Ayade, Heev, Yamamoto, Syou

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

464

1SH-06 Photo-activation mechanism of squid rhodopsin(1SH Retinal proteins and optgenetics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Murakami, Midori, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

465

1SH-07 Structural elements which control the signal transduction pathway of GPCRs(1SH Retinal proteins and optgenetics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Suwa, Makiko, Sugihara, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

466

1SI-01 Force generation mechanism of single skeletal myosin molecules in myofilaments(1SI Exploring force-generating mechanism of molecular motor ensembles; building bridges between single molecules and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kaya, Motoshi, Higuchi, Hideo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

467

1SI-03 Microtubule corkscrewing motion driven by multiple non-processive motors(1SI Exploring force-generating mechanism of molecular motor ensembles; building bridges between single molecules and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Yajima, Junichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

468

1SI-04 easuring ensemble functions of microtubule-based molecular motors(1SI Exploring force-generating mechanism of molecular motor ensembles; building bridges between single molecules and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

469

1PT127 Analysis of the influence of differences in native structures of a protein on its folding simulations with a Go model(The 50th Annual Meeting of the Biophysical Society of Japan)

Abe, Shuji, Sugita, Masataka, Kikuchi, Takeshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

470

1PT128 Crystal Structure of a light-gated cation channel, channeirhodopsin(The 50th Annual Meeting of the Biophysical Society of Japan)

Kato, Hideaki E., Zhang, Feng, Yizhar, Ofer, Ramakrishnan, Charu, Nishizawa, Tomohiro, Hirata, Kunio, Ito, Jumpei, Aita, Yusuke, Tsukazaki, Tomoyo, Hayashi, Shigehiko, Hegemann, Peter, Maturana, Andre

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

471

1PT130 Molecular dynamics simulations of endo-1,3-β-glucanase and oligosaccharide complex(The 50th Annual Meeting of the Biophysical Society of Japan)

Komichi, Nobutaka, Kamiya, Narutoshi, Nakamura, Haruki, Oda, Masayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 401 KB

english, 2012

472

1PT132 Development of a force field of backbone dihedral angles for each amino acid using Protein Data Bank(The 50th Annual Meeting of the Biophysical Society of Japan)

Sakae, Yoshitake, Okamoto, Yuko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

473

1PT134 Internal Motion Analysis of Proteins based on Robot Kinematics(The 50th Annual Meeting of the Biophysical Society of Japan)

Arikawa, Keisuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

474

1PT135 Simulation study for designing protein-protein interaction interfaces based on a four-helix bundle protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Fukuda, Masaki, Komatsu, Yu, Morikawa, Ryota, Miyakawa, Takeshi, Takasu, Masako, Akanuma, Satoshi, Yanagishi, Akihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

475

1PT138 Amyloid fibril inhibition mechanism of human calcitonin(The 50th Annual Meeting of the Biophysical Society of Japan)

Kouduki, Naoharu, Kamikubo, Hironari, Aizawa, Tomoyasu, Ogawa, Yoko, Yamazaki, Yoichi, Yamaguchi, Mariko, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

476

1PT141 Temperature-pressure-free energy landscape of ubiquitin(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Tsubasa, Kato, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

477

1PT148 Analysis of the mechanical behavior of β-catenin using AFM(The 50th Annual Meeting of the Biophysical Society of Japan)

Maki, Koichiro, Han, Sung-Woong, Adachi, Taiji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

478

1PT149 A combination analysis of PVC and DSC revealed novel multistate thermal transitions of cytochrome c(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamura, Shigeyoshi, Kidokoro, Shun-ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

479

1PT151 Global analysis of protein dynamics in living yeast cells using fluorescence correlation spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Fukuda, Takafumi, Pack, Chan-Gi, Sako, Yasushi, Kawai-Noma, Shigeko, Taguchi, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

480

1PT152 Microsecond-resolved traces of protein folding by single-molecule FRET measurements(The 50th Annual Meeting of the Biophysical Society of Japan)

Oikawa, Hiroyuki, Suzuki, Yuta, Kamagata, Kiyoto, Arai, Munehito, Takahashi, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

481

1PT153 Element-based molecular design can reproduce an artificial protein with an expected enzymatic activity(The 50th Annual Meeting of the Biophysical Society of Japan)

Kamikubo, Hironari, Sakai, Eri, Yamazaki, Yoichi, Yamaguchi, Mariko, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

482

1PT154 Structural stability of a protein in aqueous and nonaqueous environments(The 50th Annual Meeting of the Biophysical Society of Japan)

Yasuda, Satoshi, Oshima, Hiraku, Kinoshita, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

483

1PT155 Characterization of anti-prion compounds according to the binding properties to the prion protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Kamatari, Yuji O., Hayano, Yosuke, Yamaguchi, Keiichi, Hosokawa-Muto, Junji, Kuwata, Kazuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

484

1PT163 Interactions between signal transduction proteins studied by surface force measurement(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujiwara, Hitomi, Umemura, Taizo, Fujita, Masaya, Kurihara, Kazue

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 403 KB

english, 2012

485

1PT165 Design of functional miniature peptides acting like the lipase(The 50th Annual Meeting of the Biophysical Society of Japan)

Iida, Yoshihiro, Tamura, Atsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

486

1PT167 Multidimensional free energy landscape of folding of DHFR(The 50th Annual Meeting of the Biophysical Society of Japan)

Terada, Tomoki, Sasai, Masaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

487

1PT171 Co-translation folding of a three-domain protein surf1 studied by coarse-grained molecular simulations(The 50th Annual Meeting of the Biophysical Society of Japan)

Tanaka, Tomohiro, Hori, Naoto, Takada, Syoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

488

1PT174 Molecular Dynamics Simulation of Protein Using Robot Dynamics Algorithm(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamori, Yu, Takemura, Kazuhiro, Kitao, Akio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

489

1PT175 Analysis of enzyme-substrate complex of heterotetrameric sarcosine oxidase by molecular dynamic simulation(The 50th Annual Meeting of the Biophysical Society of Japan)

Hiroshima, Akinori, Suzuki, Haruo, Yoneda, Shigetaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

490

1PT176 Study on the reaction mechanism of adenylate kinase with ONIOM method(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

491

1PT177 Analysis of enzyme promiscuity(The 50th Annual Meeting of the Biophysical Society of Japan)

Nagao, Chioko, Mizuguchi, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

492

1PT180 Single particle analysis of 26S proteasome by cryo-electron microscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Mitsuoka, Kaoru, Kasuya, Daisuke, Saeki, Yasushi, Yasunaga, Takuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 404 KB

english, 2012

493

1SI-06 The emergence of epithelial pattern through force-generating and force-responding properties of myosin(1SI Exploring force-generating mechanism of molecular motor ensembles; building bridges between single molecules and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Sugimura, Kaoru, Ishihara, Shuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

494

2SA-01 The Mechanism of Cytoplasmic Dynein Motility(2SA Invited symposium from abroad: Forefront of biophysics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

495

2SA-02 Architecture of the Flagellar Switch Complex(2SA Invited symposium from abroad: Forefront of biophysics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Crane, Brian R., Sircar, R., Gonzalez-Bonet, G., Paul, Koushik, Blair, D.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

496

2SA-03 Imaging Water at the Nanoscale and Protein in Water by TE(2SA Invited symposium from abroad: Forefront of biophysics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Matsudaira, Paul T.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

497

2SA-04 Function dictates topology in biochemical networks(2SA Invited symposium from abroad: Forefront of biophysics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

498

10.2142/biophys.52._s24_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 74 KB

2012

499

10.2142/biophys.52._s6_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 353 KB

2012

500

10.2142/biophys.52.app1

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 89 KB

2012

501

10.2142/biophys.52.app3

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 192 KB

2012

502

1PT192 Atomic stress tensor analysis in biomolecules(The 50th Annual Meeting of the Biophysical Society of Japan)

Ishikura, Takakazu, Hatano, Tatsurou, Yamato, Takahisa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

503

1PT206 Cell adhesion molecule 1 (CADM1) on mast cells promotes interaction with dorsal root ganglion neurites by heterophilic binding to nectin-3(The 50th Annual Meeting of the Biophysical Society of Japan)

Furuno, Tadahide, Sekimura, Miho, Okamoto, Keisuke, Hagiyama, Man, Ito, Akihiko, Suzuki, Ryo, Hirashima, Naohide, Nakanishi, Mamoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

504

1PT210 Response characteristics of reconstructed ERK phosphorylation and dephosphorylation depending on ERK concentration(The 50th Annual Meeting of the Biophysical Society of Japan)

Takahashi, Masahiro, Yanagida, Toshio, Sako, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

505

1PT216 Detection of bio-molecules localized in specific cells of Ciona intestinalis embryo by Raman spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamura, Mitsuru, Hotta, Kohji, Oka, Kotaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

506

1PT224 High-gravity-based synthesizing method for hydrogel microparticles with non-spherical structures(The 50th Annual Meeting of the Biophysical Society of Japan)

Hayakawa, Masayuki, Onoe, Hiroaki, Nagai, Ken H., Takinoue, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

507

1PT227 Prototype molecular robots working on cellular membrane(The 50th Annual Meeting of the Biophysical Society of Japan)

Sato, Yusuke, Fujiwara, Kei, Hamada, Shogo, Murata, Satoshi, Nomura, Sin-ichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

508

1PT232 Efficient manipulation of cell mechanotaxis : effect of the of micro-elasticity boundary(The 50th Annual Meeting of the Biophysical Society of Japan)

Utsumi, Ayaka, Kidoaki, Satoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

509

2PS002 The functional role of the charged residues of two different stators : MotA subunit and MotP subunit in B. subtilis flagellar motor(The 50th Annual Meeting of the Biophysical Society of Japan)

Takahashi, Yuka, Ito, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

510

2PS007 Reading of the flagellar type III protein export regulation from a flagellar specific chaperone FlgN(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

511

2PS010 Free energy landscape analysis of the actin-myosin VI interaction under the applied force(The 50th Annual Meeting of the Biophysical Society of Japan)

Ikeo, Masahito, Sasai, Masaki, Terada, Tomoki P.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

512

2PS019 Reconstitution of tug-of-war between defined numbers of kinesin and dynein as active bidirectional transport(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Kazuyuki, Furuta, Ken'ya, Honda, Hajime, Kojima, Hiroaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

513

2PS020 1YS0945 Simultaneous reconstitution of MSP-based protrusion and retraction in the amoeboid sperm of Ascaris(The 50th Annual Meeting of the Biophysical Society of Japan,Early Research in Biophysics Award Candidate Presentations,Early Research in Biophysics Award)

Shimabukuro, Katsuya, Noda, Naoki, Yoshida, Masasuke, Stewart, Murray, Roberts, Thomas M.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

514

2PS026 Helical Flow of Surface Protein Required for Bacterial Locomotion(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakane, Daisuke, Sato, Keiko, Wada, Hirofumi, McBride, Mark J., Nakayama, Koji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

515

2PS028 Structure and function of bacterial flagellar protein export apparatus revealed by electron cryotomography of Salmonella minicells(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawamoto, Akihiro, Morimoto, Yusuke V., Kato, Takayuki, Hughes, Kelly T., Yanagida, Toshio, Namba, Keiichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 403 KB

english, 2012

516

2PS029 Effect of the D33N mutation in MotB on stator assembly of the bacterial flagellar motor(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamura, Shuichi, Minamino, Tohru, Kami-ike, Nobunori, Kudo, Seishi, Namba, Keiichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

517

2PS032 Characterization of the electrically-charged residues in the torque-generating unit of the flagellar motor(The 50th Annual Meeting of the Biophysical Society of Japan)

Inaba, Satoshi, Aizawa, Shin-Ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

518

2PS034 Direct observation of cooperative binding of cofilin to actin filaments(The 50th Annual Meeting of the Biophysical Society of Japan)

Hayakawa, Kimihide, Tatsumi, Hitoshi, Goto, Takafumi, Sokabe, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

519

2PS043 Development for dynamic Live Cell imaging by cryo-electron tomography(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwane, Atsuko H., Ogawa, Ruriko, Nagai, Rina, Kawamoto, Akihiro, Aoyama, Kazuhiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

520

2PS050 Redox-regulated switching of the phototactic sign in Chlamydomonas(The 50th Annual Meeting of the Biophysical Society of Japan)

Mochiji, Shota, Ohnishi, Norikazu, Minagawa, Jun, Kamiya, Ritsu, Wakabayashi, Ken-ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

521

2PS052 Force-biochemical interaction for cell migration(The 50th Annual Meeting of the Biophysical Society of Japan)

Sakumura, Yuichi, Iwadate, Yoshiaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

522

2PT002 Development of a de novo protein structure prediction method based on the antecedent domain segment(ADS) hyphothesis(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamori, Kota, Minami, Shintaro, Sawada, Kengo, Chikenji, George

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 403 KB

english, 2012

523

2SC-01 Toward a physical understanding of spindle assembly and function(2SC Living matter far from equilibrium: from DNA to cytoskeletons and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Shimamoto, Yuta

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

524

2PT106 Integration of Structural and Biochemical Information into Protein Interaction Network(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawakami, Yuji, Sarai, Akinori, Fujii, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

525

2PT107 A classification of enzymatic reactions and its application to metabolic pathway search(The 50th Annual Meeting of the Biophysical Society of Japan)

Goto, Susumu, Kotera, Masaaki, Tokimatsu, Toshiaki, Moriya, Yuki, Nakagawa, Zen-ichi, Muto, Ai, Kanehisa, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

526

2PT113 NMR study on the role of protein fluctuation in determining the amyloid conformation(The 50th Annual Meeting of the Biophysical Society of Japan)

Ohhashi, Yumiko, Tanaka, Motomasa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

527

2PT122 The dynamics and conformation of Trp208 and Trp237 as regulating factor of enzymatic activity of Pokeweed Antiviral Protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakashima, Hiromichi, Fukunaga, Yukihiro, Watanabe, Keiichi, Yamashita, Shoji, Nishimoto, Etsuko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

528

2PT125 Dynamics and Structural Changes of ABCB1 transporter induced by binding of substrates and inhibitors(The 50th Annual Meeting of the Biophysical Society of Japan)

Hsu, Wei-Lin, Watanabe, Yurika, Furuta, Tadaomi, Sakurai, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

529

2PT135 Coarse-grained molecular dynamics study of ligand-dependent reaction activity of PPAR_γ(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

530

2PT139 Molecular dynamics simulations of SR Ca2+-pump in the ATP bound forms(The 50th Annual Meeting of the Biophysical Society of Japan)

Komuro, Yasuaki, Kobayashi, Chigusa, Muneyuki, Eiro, Sugita, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

531

2SD-03 Development of the cell simulator in consideration of space(2SD Supercomputing in Molecular Network to Cellular Dynamics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Yokota, Hideo, Sunaga, Yasuhiro, Noda, Sigeho

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

532

2PT150 Development of novel anti-tumor complexes made from a protein in the molten globule state(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamura, Takashi, Kariya, Ryusho, Okada, Seiji, Kuwajima, Kunihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 202 KB

english, 2012

533

2PT156 Purification of cbb_3-type cytochrome c oxidase(The 50th Annual Meeting of the Biophysical Society of Japan)

Ando, Yuriko, Iwamoto, Yui, Muramoto, Kazumasa, Shimada, Hideo, Gennis, Robert, Shiro, Yoshitsugu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

534

2PT159 Substitution effects of Gly for the proximal His of α subunits on the structure and oxygen binding function of human hemoglobin(The 50th Annual Meeting of the Biophysical Society of Japan)

Aki, Yayoi, Nagai, Yukifumi, Imai, Kiyohiro, Nagatomo, Shigenori, Ogura, Takashi, Kitagawa, Teizo, Nagai, Masako

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

535

2PT160 Gene cloning and identification of terminal oxidase of respiratory chain in Vibrio alginolyticus(The 50th Annual Meeting of the Biophysical Society of Japan)

Yano, Naomine, Muramoto, Kazumasa, Kojima, Seiji, Homma, Michio, Shiro, Yoshitsugu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

536

2PT163 The effect of saccharide on autoxidation rate of hemoglobin(The 50th Annual Meeting of the Biophysical Society of Japan)

Uehara, Wataru, Imai, Kiyohiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

537

2PT168 Conformational change in M-intermediate of D96N-bR as studied by in-situ photo-irradiated solid-state NMR(The 50th Annual Meeting of the Biophysical Society of Japan)

Miyasa, Ryota, Kawamura, Izuru, Tuzi, Satoru, Naito, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

538

2PT172 Effect of N-terminal region to the structure formation of PYP(The 50th Annual Meeting of the Biophysical Society of Japan)

Sakonji, Mitsuhiro, Yamazaki, Yoichi, Kamikubo, Hironari, Yamaguchi, Mariko, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

539

2PT178 A theoretical study on the structure of bovine rhodopsins(The 50th Annual Meeting of the Biophysical Society of Japan)

Kamiya, Motoshi, Hayashi, Shigehiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

540

2PT204 Generation of Functional Peptides Consisting of 4 Types of Amino Acids by cDNA Display Method(The 50th Annual Meeting of the Biophysical Society of Japan)

Kumachi, Shigefumi, Suzuki, Miho, Nishigaki, Koichi, Husimi, Yuzuru, Nemoto, Naoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

541

2PT207 Observation of reproducing process the E. coli bacterium from a giant protoplast(The 50th Annual Meeting of the Biophysical Society of Japan)

Tabata, Kazuhito, Sogo, Takao, Takeuchi, Shoji, Noji, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

542

2PT226 Gradient sensing of deformed eukaryotic chemotactic cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Baba, Akinori, Hiraiwa, Tetsuya, Shibata, Tatsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

543

2PT231 Theoretical study of temperature and nutrient compensation of circadian clock(The 50th Annual Meeting of the Biophysical Society of Japan)

Hatakeyama, Tetsuhiro, Kaneko, Kunihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

544

2PT239 Phase response of the collective cAMP oscillations in Dictyostelium discoideum and its implication to the adaptive properties(The 50th Annual Meeting of the Biophysical Society of Japan)

Imoto, Daisuke, Sawai, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 158 KB

english, 2012

545

3PS006 Structural and Biochemical Properties of the Outer-Dynein-Arm Docking Complex (ODA-DC) in Chlamydomonas flagella(The 50th Annual Meeting of the Biophysical Society of Japan)

Owa, Mikito, Ide, Takahiro, Kamiya, Ritsu, Wakabayashi, Kenichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 401 KB

english, 2012

546

3PS007 Analysis of protein-protein interactions required for the assembly of outer arm dyneins on the axonemal microtubules in Chlamydomonas(The 50th Annual Meeting of the Biophysical Society of Japan)

Ide, Takahiro, Owa, Mikito, Yoshida, Kaoru, Yoshida, Manabu, Kamiya, Ritsu, Wakabayashi, Ken-ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

547

3PS016 Development of "hopping-mode" high speed atomic force microscopy (AFM)(The 50th Annual Meeting of the Biophysical Society of Japan)

Watanabe, Hiroki, Shibata, Mikihiro, Uchihashi, Takayuki, Yasuda, Ryohei, Ando, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

548

3PS019 Development of Carbon Nanotube Electrode For High Sensitivity Recordings of Neurotransmitters(The 50th Annual Meeting of the Biophysical Society of Japan)

Fukuda, Mao, Suzuki, Ikurou, Gotoh, Masao

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

549

3PS034 Imaging analysis of Arp4p mutants in ATP-binding site(The 50th Annual Meeting of the Biophysical Society of Japan)

Inaba, Naomichi, Ito, Yuma, Harata, Masahiko, Tokunaga, Makio, Sakata-Sogawa, Kumiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

550

3PS039 Highly sensitive imaging of cell membrane proteins by using lanthanide materials(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamrua, Tatsuya, Mizukami, Shin, Kikuchi, Kazuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

551

3PS040 Super-resolution imaging of mRNA nano-structures in stress granule(The 50th Annual Meeting of the Biophysical Society of Japan)

Sugawara, Ko, Okabe, Kohki, Sakamoto, Akihiko, Funatsu, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

552

3PS042 ^F MRI monitoring of Gene Expression in living cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsushita, Hisashi, Mizukami, Shin, Mori, Yuki, Sugihara, Fuminori, Shirakawa, Masahiro, Yoshioka, Yoshichika, Kikuchi, Kazuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

553

3PS043 Development of nanocapsule probes for sensitive ^F MRI(The 50th Annual Meeting of the Biophysical Society of Japan)

Mukai, Hiroaki, Mizukami, Shin, Nakanishi, Yosuke, Sugihara, Fuminori, Kikuchi, Kazuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

554

3PT004 Determination of dissociation constant between glucocorticoid receptor and DNA using FCCS(The 50th Annual Meeting of the Biophysical Society of Japan)

Mikuni, Shintaro, Kinjo, Masataka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

555

3PT011 Diffusion of TFIIIA zinc fingers along DNA studied by molecular simulations(The 50th Annual Meeting of the Biophysical Society of Japan)

Miyoshi, Yohei, Terakawa, Tsuyoshi, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

556

2SG-01 Kinetics of RNA polymerase II transcription in living cells(2SG Dynamics of chromatin as the physicochemical field for genetic activities,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kimura, Hiroshi, Stasevich, Timothy J.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

557

2SG-03 Structural versatility, dynamics, and functions of human nucleosomes containing histone variants(2SG Dynamics of chromatin as the physicochemical field for genetic activities,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kurumizaka, Hitoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

558

3PT118 Functional in vitro reconstitution of Calcium-activated Chloride channel, TMEM16A/anoctamin1(The 50th Annual Meeting of the Biophysical Society of Japan)

Terashima, Hiroyuki, Picollo, Alessandra, Accardi, Alessio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

559

3PT120 Effects of archaeal lipids removal in purple membrane upon bump structures of membrane surface and bacteriorhodopsin conformations(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamada, Kosuke, Yokoyama, Yasunori, Mitaku, Shigeki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

560

3PT123 Molecular assembly of bacteriorhodopsin reconstituted into partially fluorinated phosphatidylcholine liposome in liquid crystalline phase(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshino, Masaru, Kanayama, Kenji, Kikukawa, Takashi, Takagi, Toshiyuki, Takahashi, Hiroshi, Baba, Toshihiko, Kanamori, Toshiyuki, Sonoyama, Masashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

561

3PT125 Liposomes as chaperone in cell-free membrane protein synthesis(The 50th Annual Meeting of the Biophysical Society of Japan)

Akiyama, Minato, Yasuoka, Jun-ichi, Sawada, Shin-ichi, Akiyoshi, Kazunari

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

562

3PT131 Homology modeling and molecular dynamics study of proton permeation pathway in a channel protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Chiba, Susumu, Kasahara, Kota, Shirota, Matsuyuki, Kinoshita, Kengo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

563

3PT143 Size-controlled Giant Liposome Array System with Gentle Hydration(The 50th Annual Meeting of the Biophysical Society of Japan)

Osaki, Toshihisa, Kamiya, Koki, Kuribayashi, Kaori, Kawano, Ryuji, Takeuchi, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

564

3PT145 Dynamics of complicated phase behavior on the mixtures consisting of long-chain phospholipids DMPC and short-chain phospholipids DHPC(The 50th Annual Meeting of the Biophysical Society of Japan)

Kobayashi, Ryota, Ohba, Tetsuhiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 391 KB

english, 2012

565

3PT149 Effect of sodium lauryl sulfate on the human stratum corneum structures(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshida, Hironori, Azechi, Satoe, Nakazawa, Hiromitsu, Shigeta, Yasutami, Kato, Satoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

566

3PT155 Direct observations of flip-flops in membranes(The 50th Annual Meeting of the Biophysical Society of Japan)

Akimoto, Takuma, Arai, Noriyoshi, Yamamoto, Eiji, Yasuoka, Kenji, Yasui, Masato

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

567

3PT158 Film thickness and property of ion conductive rectification element using amino acids, gel and hydrogenated amorphous silicon(The 50th Annual Meeting of the Biophysical Society of Japan)

Sano, Takahiko, Sugawara, Hideaki, Ichikawa, Takaaki, Hiramitsu, Yuuki, Masumoto, Hiroshi, Goto, Takashi, Tsujiuchi, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

568

3PT162 Induction of phospholipid flip-flop by KcsA channel gating(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakao, Hiroyuki, Wakabayashi, Masaki, Ishihama, Yasushi, Nakano, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

569

2SH-04 Imaging mass spectrometry revealed the polarized intracellular distribution of specific lipid molecular species(2SH Star of life shined by frontier microscopies,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Setou, Mitsutoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

570

3PT171 Analysis of protein translocation in a reconstituted Dictyostellum cell membrane on a solid substrate(The 50th Annual Meeting of the Biophysical Society of Japan)

Takahashi, Kei, Shimada, Nao, Toyota, Taro, Sawai, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 221 KB

english, 2012

571

3PT178 Conformational properties of the Def6 PH domain located at the lipid bilayer surface(The 50th Annual Meeting of the Biophysical Society of Japan)

Tokuda, Naomi, Tanio, Michikazu, Nishimura, Katsuyuki, Kohno, Toshiyuki, Yokogawa, Daisuke, Ikegami, Takahisa, Tuzi, Satoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

572

3PT205 Corticosterone induced GR/kinase network-driven rapid spinogenesis in rat hippocampus(The 50th Annual Meeting of the Biophysical Society of Japan)

Komatsuzaki, Yoshimasa, Kasuya, Masatoshi, Hojo, Yasushi, Kawato, Suguru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

573

3PT209 Thymoquinone, the Nigella sativa Bioactive Compound, Prevents β amyloid neurotoxicity in cultured rat primary neurons(The 50th Annual Meeting of the Biophysical Society of Japan)

Alhibshi, Amani, Suzki, Ikuro, Gotoh, Masao

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

574

3PT210 Insulin-mediated neural signals negatively regulate temperature tolerance in C. elegans(The 50th Annual Meeting of the Biophysical Society of Japan)

Ohta, Akane, Ujisawa, Tomoyo, Kinoshita, Yukari, Mizutani, Hitomi, Inoue, Takurou, Inoue, Naho, Kuhara, Atsushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

575

2SH-07 New Fluorescent Probes and New Perspectives in Bioscience(2SH Star of life shined by frontier microscopies,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Miyawaki, Atsushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 224 KB

english, 2012

576

2SI-02 Single molecule energetics of F_1-ATPase motor(2SI The art of energetic and functional efficiency in biomoiecular machines on the single molecule level,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Toyabe, Shoichi, Watanabe-Nakayama, Takahiro, Ueno, Hiroshi, Okamoto, Tetsuaki, Taketani, Hiroshi, Kudo, Seishi, Muneyuki, Eiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 224 KB

english, 2012

577

3PT237 Essential role of NADPH oxidase in vitamin D3- and PMA-induced monocytic differentiation of PLB-985 cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Kato, Hiroyuki, Nawa, Omi, Kato, Asuka, Hiraoka, Wakako

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

578

10.2142/biophys.52.s183

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 2.11 MB

english, 2012

579

10.2142/biophys.52.s199_1

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 191 KB

2012

580

1A1412 Thermal response of myosin motors on single carbon nanotubes(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nagata, Mitsunori, Matsutaka, Hiroshi, Okada, Takeru, Ishijima, Akihiko, Inoue, Yuichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

581

1SA-04 Coordinated reversal of flagellar motors on a single Escherichia coli cell(1SA Bridging single molecule biology and biochemistry to understand operation principles of blo-nanosystems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Ishijima, Akihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

582

10.2142/biophys.52.s203_2

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 167 KB

2012

583

1A1534 Sodium Dynamics of the Bacterial Flagellar Motor(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Lo, Chien-Jung, Sowa, Yoshiyuki, Pilizota, Teuta, Berry, Richard

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

584

1C1546 Orientation-controlled immobilization of pharaonis halorhodopsin onto gold revealed by SEIRAS(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Guo, Hao, Kimura, Tetsunari, Furutani, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

585

1D1448 Active Mechanical Role of Apoptosis in Tissue Dynamics during Drosophila Morphogenesis(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

586

1E1412 The conformational restriction of denatured protein encapsulated in the chaperonin cage(Proteins: Property I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Motojima, Fumihiro, Motojima-Miyazaki, Yuko, Yoshida, Masasuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

587

1E1534 Kinetics of hydrogen-bonding of protein hydration water and its dynamical coupling with protein dynamics(Proteins: Property I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nakagawa, Hiroshi, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

588

1E1546 Temperature and hydration effects of low-frequency spectra of native and denatured proteins studied by terahertz timedomain spectroscopy(Proteins: Property I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Naoki, Tamura, Atsuo, Tominaga, Keisuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

589

1SB-01 Synergy between Stiffness and Softness on DNA : Spatiotemporal Order Organized through the Higher-Order Structural Transition of DNA(1SB Body-cell dynamic linkage: softness, flexibility, fluctuation and controllability,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Takenaka, Yoshiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

590

1SB-03 1SB-03 Body-cell dynamic mechano-mechanical linkage : softness, flexibility, fluctuation and controllability derived from ECM environment as "niche for cells in our body"(1SB Body-cell dynamic linkage: softness, flexibility, fluctuation and controllability,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Atomi, Yoriko, Shimizu, Miho, Fujita, Eri, Atomi, Tomoaki, Hirose, Noboru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

591

1F1534 Differences between the ground state and the M-intermediate of Sensory Rhodopsin II-Transducer complex revealed by comparative simulations(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nishikata, Koro, Ikeguchi, Mitsunori, Kidera, Akinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

592

1G1400 Larger Intercellular Adhesion Strength Generates More Coherent and Directional Multicellular Movement : Measurement and Simulation(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hirashima, Tsuyoshi, Iino, Takanori, Hosokawa, Yoichiroh, Nagayama, Masaharu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

593

1H1400 Visualization of intracellular defense system against exogenous DNAs by using cross-correlation raster image correlation spectroscopy(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sasaki, Akira, Kinjo, Masataka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

594

1H1448 Single-molecule imaging revealed acceleration of trimeric G-protein turnover by transient dimerization of liganded β2adrenergic receptor(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kasai, Rinshi, Fujiwara, Takahiro, Kusumi, Akihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

595

1H1510 High-speed AFM combined with optical microscopy(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Fukuda, Shingo, Uchihashi, Takayuki, Ando, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

596

1I1400 Analyzing the conservation of the folding nucleuses among the Ferredoxin-like fold in their amino acids sequence(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Matsuoka, Masanari, Kikuchi, Takeshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

597

1I1412 Database analysis of the degree of protein conformational changes in RNA-protein interactions(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kubota, Chihiro, Yura, Kei

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

598

1SB-06 Rigidity Matching between Cells and the Extracellular Matrix Leads to the Stabilization of Cardiac Conduction(1SB Body-cell dynamic linkage: softness, flexibility, fluctuation and controllability,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Hoerning, Marcel

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

599

2B1534 Redox environment is an intracellular factor to operate distinct pathways for protein aggregation(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Furukawa, Yoshiaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

600

2B1546 A copper chaperone-independent mechanism for activation of Cu, Zn-superoxide dismutase(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sakurai, Yasuyuki, Furukawa, Yoshiaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

601

2B1610 Destabilization of SOD1 facilitates abnormal scrambling of its disulfide bond in the familial form of amyotrophic lateral sclerosis(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Toichi, Keisuke, Furukawa, Yoshiaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

602

2C1400 A Brownian particle undergoing reversible binding in a surface : exact theoretical results and an application in single molecule biophysics(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

603

2D1558 Relationship between Intercellular Adhesion Strength and Communication Detected by Femtosecond Laser-induced Impulsive Force(Measurements,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Iino, Takanori, Hagiyama, Man, Furuno, Tadahide, Ito, Akihiko, Hosokawa, Yoichiroh

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

604

2F1400 Full-Quantum Chemical Calculations of the Absorption Maxima of Retinal Proteins(Photobiology:Vision & Photoreception II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hayashi, Tomohiko, Matsuura, Azuma, Sato, Hiroyuki, Sakurai, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

605

2F1546 Repair of damaged DNA by the anion radical form of (6-4) photolyase(Photobiology:Vision & Photoreception II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamada, Daichi, Zhang, Yu, Iwata, Tatsuya, Yamamoto, Junpei, Hitomi, Kenichi, Iwai, Shigenori, Getzoff, Elizabeth, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

606

2G1412 Lipid bilayer chamber array toward fluorescent and electrophysiological measurement of membrane proteins(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tonooka, Taishi, Kawano, Ryuji, Sato, Koji, Osaki, Toshihisa, Takeuchi, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

607

2H1522 The Effects of Nonlinear Elasticity of Myosin Molecules on Muscle Contraction Studied by Numerical Simulation(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Miyamoto, Keita, Sasaki, Kazuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

608

2I1558 Propagation of intracellular signaling molecule in the presence and absence of polar localization of CheZ in a single E. coli cell(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Fukuoka, Hajime, Sagawa, Takashi, Inoue, Yuichi, Takahashi, Hiroto, Ishijima, Akihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

609

3B0912 X-ray structural analysis of HypE and HypF, maturation factors for [NiFe]-hydrogenases(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Shomura, Yasuhito, Higuchi, Yoshiki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 402 KB

english, 2012

610

3B1046 Interactions between cyanobacterial clock proteins KaiA and KaiC revealed by ESR analysis(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ishii, Kentaro, Arata, Toshiaki, Ishiura, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

611

1SE-04 Oligomerization of cytochrome c by domain swapping(1SE Conformational dynamics: Folding to function,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

612

3C0948 Dynamical motions of tRNA and ribosome complex during translation elongation studied by coarse-grained molecular simulations(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hori, Naoto, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

613

3C1034 Elucidation of the location-dependent deamination reaction mechanism of an anti-HIV factor, APOBEC3G(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Furukawa, Ayako, Sugase, Kenji, Morishita, Ryo, Nagata, Taashi, Takaori, Akifumi, Ryo, Akihide, Katahira, Masato

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

614

3D0912 Factors that differentiate the H-bond strengths of water near the Schiff bases in bacteriorhodopsin and Anabaena sensory rhodopsin(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ishikita, Hiroshi, Saito, Keisuke, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

615

3E1010 Structural analysis of the 26S proteasome by cryo-electron microscopy and Single-Particle Analysis(Proteins:Structure,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Wang, Zhuo, Okuma, Yasuo, Kasuya, Daisuke, Mitsuoka, Kaoru, Saeki, Yasushi, Takuo, Yasunaga

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

616

3E1110 Replica-exchange interface program (REIN)(Proteins:Structure,Oral Presentation)

Miyashita, Naoyuki, Re, Suyong, Sugita, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

617

3F1058 OBSERVATION OF TRANSMEMBRANE PROTEIN BY HIGH SPEED ATOMIC FORCE MICROSCOPY : BACTERIORHODOPSIN D85S MUTANT, A CHLORIDE PUMP(Membrane Proteins,Oral Presentation)

Ewald, Maxime, Shibata, Mikihiro, Uchihashi, Takayuki, Kandori, Hideki, Ando, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

618

3G1034 Microsphere-containing giant vesicles prepared by water-in-oil emulsion centrifugation method(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Natsume, Yuno, Toyota, Taro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 392 KB

english, 2012

619

3G1110 Breakthrough for Unresolved Structural Problems in Skin Function by Combined Use of X-ray and Electron Diffraction Methods(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Nakazawa, Hiromitsu, Hatta, Ichiro, Kato, Satoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

620

1SF-04 Modeling morphological dynamics of migrating cells governed by self-organized excitable waves(1SF Theoretical Approaches to Biological Motion and Deformation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Ishihara, Shuji, Taniguchi, Daisuke, Sawai, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

621

3H0948 Theory on the chemotaxis of an amoeboid cell with the cell polarity(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Hiraiwa, Tetsuya, Shibata, Tatsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

622

3H1034 Smooth muscle differentiation related transcription factor CRP2 directly regulates physical properties of actin filaments(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Kihara, Takanori, Shinohara, Satoko, Sugimoto, Yasunobu, Miyake, Jun

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

623

3H1058 Spatiotemporal regulation of signaling by active cytoskeletal remodeling(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Bhattacharyya, Bhaswati, Chaudhuri, Abhishek, Gowrishankar, Kripa, Mayor, Satyajit, Rao, Madan

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

624

3I1022 An Intermediate Conformation of Cytochrome Oxidase in the Ligand-Free State Identified by Time-Resolved Resonance Raman Spectroscopy(Heme Proteins,Oral Presentation)

Ishigami, Izumi, Nishigaki, Takeshi, Shinzawa-Itoh, Kyoko, Yoshikawa, Shinya, Nakashima, Satoru, Ogura, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

625

3I1034 Time-Resolved IR Analyses of Proteins Using a Novel Pulse Flow System Synchronized with Pump/Probe Lasers(Heme Proteins,Oral Presentation)

Kubo, Minoru, Nakashima, Satoru, Mochizuki, Masao, Shinzawa-Itoh, Kyoko, Yoshikawa, Shinya, Ogura, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 310 KB

english, 2012

626

3I1046 The assignment of the resonance Raman bands of heme α peripheral substituents in cytochrome c oxidase(Heme Proteins,Oral Presentation)

Sakaguchi, Miyuki, Katayama, Yukie, Fujii, Hiroshi, Shimada, Hideo, Ogura, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 120 KB

english, 2012

627

1PS005 Cosolvent effects on the hydration state and the enzymatic activity of skeletal myosin(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakagawa, Takuya, Yasui, Shin-ichiro, Wazawa, Tetsuichi, Mogami, George, Suzuki, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

628

1PS009 Real-time measurement of sarcomere length in the mouse heart in vivo by using a-actinin-GFP(The 50th Annual Meeting of the Biophysical Society of Japan)

Mizuno, Akari, Kobirumaki-Shimozawa, Fuyu, Oyama, Kotaro, Terui, Takako, Hirokawa, Erisa, Simozawa, Togo, Ishiwata, Shin'ichi, Fukuda, Norio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

629

1PS017 Characteristics of auto-oscillation (SPOC) for skeletal myofibrils observed near the boundary region with relaxation conditions(The 50th Annual Meeting of the Biophysical Society of Japan)

Sato, Kaori, Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

630

1PS022 Effect of external torque on the rotation of TFβ E190D mutant(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawakami, Tomohiro, Toyabe, Shoici, Ueno, Hiroshi, Kudo, Seishi, Muneyuki, Eiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

631

1PS026 Torque input/output profiles of F_1-ATPase(The 50th Annual Meeting of the Biophysical Society of Japan)

Saita, Eiichiro, Kinosita, Kazuhiko, Yoshida, Masasuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

632

1SH-04 Optogenetics reveals function of neural network involved in the regulation of sleep/wakefulness(1SH Retinal proteins and optgenetics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamanaka, Akihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

633

1PS048 Deformations of moving actin filaments on myosin molecules in the presence of ATP, ADP, and inorganic phosphate(The 50th Annual Meeting of the Biophysical Society of Japan)

Kikuchi, Satoru, Hatori, Kuniyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

634

1PS049 Discovery of strain-sensor mechanism in motor protein and the quantification for the energy conversion(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwaki, Mitsuhiro, Fujita, Keisuke, Iwane, Atsuko, Marcucci, Lorenzo, Yanagida, Toshio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

635

1PT001 Solvation free energy in protein dochking process(The 50th Annual Meeting of the Biophysical Society of Japan)

Mizukami, Taku, Siato, Hiroaki, Nagao, Hidemi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

636

1PT005 Solubilization and Its Dynamics of Caffeic Acid Induced by Arginine(The 50th Annual Meeting of the Biophysical Society of Japan)

Shinozaki, Daisuke, Hirano, Atsushi, Kameda, Tomoshi, Arakawa, Tsutomu, Shiraki, Kentaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

637

1PT010 Hydration study of oligophosphates by dielectric relaxation spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Ishimori, Kazuki, Mogami, George, Morimoto, Nobuyuki, Suzuki, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

638

1PT101 The crystal structures of hemoglobin from the woolly mammoth in liganded and unliganded states(The 50th Annual Meeting of the Biophysical Society of Japan)

Noguchi, Hiroki, Unzai, Satoru, Campbell, Kevin L., Ho, Chien, Park, Sam-Yong, Tame, Jeremy R. H.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

639

1PT105 Structure of DotI, a core component of the Type IVB secretion system(The 50th Annual Meeting of the Biophysical Society of Japan)

Kuroda, Takuya, Uchida, Yumiko, Kubori, Tomoko, Nagai, Hiroki, Imada, Katsumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

640

1PT115 Structural analysis of hNck2 SH3 domain at various pH : non-native α-helix-rich monomer and native dimer(The 50th Annual Meeting of the Biophysical Society of Japan)

Shinjio, Masaji, Matsumura, Yoshitaka, Ichimura, Kaoru, Song, Jianxing, Kihara, Hiroshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

641

1PT116 Crystal structure of the fatty acid binding protein 3 (FABP3) with or without fatty acid(The 50th Annual Meeting of the Biophysical Society of Japan)

Hirose, Mika, Sugiyama, Shigeru, Niiyama, Mayumi, Ishida, Hanako, Inoue, Tsuyoshi, Matsuoka, Shigeru, Murata, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

642

1PT117 Structural study on inhibitor specifity of bacterial multidrug efflux pumps(The 50th Annual Meeting of the Biophysical Society of Japan)

Hayashi, Katsuhiko, Nakashima, Ryosuke, Sakurai, Keisuke, Yamasaki, Seiji, Nagata, Chikahiro, Hoshino, Kazuki, Onodera, Yoshikuni, Nishino, Kunihiko, Yamaguchi, Akihito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

643

1PT124 The role of the flexible loop in Staphylococcal nuclease on its catalytic activity(The 50th Annual Meeting of the Biophysical Society of Japan)

Shiba, Rumi, Kamikubo, Hironari, Yamazaki, Yoichi, Yamaguchi, Mariko, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

644

1PT129 Watching DNA polymerase η make a phosphodiester bond(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamura, Teruya, Zhao, Ye, Yamagata, Yuriko, Hua, Yue-jin, Yang, Wei

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

645

1PT131 Development and application of the helix-strand replica-exchange molecular dynamics method(The 50th Annual Meeting of the Biophysical Society of Japan)

Okumura, Hisashi, Itoh, Satoru G.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

646

1PT133 Molecular dynamics model of cofilactin filament(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujii, Tetsuya, Inoue, Yasuhiro, Adachi, Taiji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

647

1PT139 Analysis of Almost Reversible Conformational Change of Amyloid Fibrils by Double pH-jump(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamaguchi, Keiichi, Kamatari, Yuji O., Fukuoka, Mayuko, Miyaji, Reiji, Kuwata, Kazuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

648

1PT143 THERMODYNAMIC PARAMETERS ASSOCIATED WITH THE GroEL-GroES BINDING(The 50th Annual Meeting of the Biophysical Society of Japan)

Takenaka, Toshio, Nakamura, Takashi, Chen, Jin, Kuwajima, Kunihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

649

1PT147 Multiscale enhanced sampling simulation of protein interaction(The 50th Annual Meeting of the Biophysical Society of Japan)

Moritsugu, Kei, Terada, Tohru, Kidera, Akinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

650

1PT156 Conformational stability, reversibility and heat-induced aggregation of glycoprotein A(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwura, Takafumi, Arisaka, Fumio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

651

1PT157 Structural properties and folding process of hNck2 SH3 domain(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsumura, Yoshitaka, Shinjo, Masaji, Matsui, Tsutomu, Ichimura, Kaoru, Song, Jianxing, Kihara, Hiroshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

652

1PT158 Extremely rapid binding of the intrinsically disordered p53 transactivation subdomain with the TAZ2 domain of CBP(The 50th Annual Meeting of the Biophysical Society of Japan)

Arai, Munehito, Ferreon, Josephine C., Wright, Peter E.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 409 KB

english, 2012

653

1PT160 Recognition of a TAR nucleic acid by HIV-1 Tat, an intrinsically disordered protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Sodeyama, Kohei, Hayashi, Yuuki, Nakamura, Takashi, Makabe, Koki, Kuwajima, Kunihiro, Arai, Munehito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

654

1PT161 Control of Structure Stability of mSin3 by Frustration-Induced Intrinsic Disorder of NRST/REST(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsushita, Katsuyoshi, Kikuchi, Macoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

655

1PT170 The time series analysis of molecular dynamics data about PDZ domain in synapse(The 50th Annual Meeting of the Biophysical Society of Japan)

Kishida, Naoko, Fujisaki, Hiroshi, Toda, Mikito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

656

1PT179 A new approximation method for estimating SAXS profiles of solutes with multiple molecular conformations(The 50th Annual Meeting of the Biophysical Society of Japan)

Seki, Yasutaka, Nakamura, Shigeyoshi, Kidokoro, Shun-ichi, Nonaka, Takamasa, Soda, Kunitsugu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

657

1SI-05 A cellular funicular : one active force generation drives two directional organelle movements(1SI Exploring force-generating mechanism of molecular motor ensembles; building bridges between single molecules and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kimura, Akatsuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

658

10.2142/biophys.52._s12_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 560 KB

2012

659

10.2142/biophys.52._s3_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 430 KB

2012

660

10.2142/biophys.52.as1

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 156 KB

2012

661

1PT191 Time-series analysis for protein dynamics using discrete wavelet transform with kernel canonical correlation analysis(The 50th Annual Meeting of the Biophysical Society of Japan)

Kamada, Mayumi, Toda, Miikito, Akutsu, Tatsuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 398 KB

english, 2012

662

1PT213 Design and synthesis of a novel photochromic HDAC inhibitor and its inhibitory effect(The 50th Annual Meeting of the Biophysical Society of Japan)

Tanaka, Keiko, Maruta, Shinsaku

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

663

1PT226 Artificial Panspermia by Molecular Robots(The 50th Annual Meeting of the Biophysical Society of Japan)

Endo, Masahiro, Fujiwara, Kei, Hamada, Syougo, Murata, Satoshi, Nomura, Shin-ichiro M

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

664

1PT228 Molecular robotics : Construction of a remote control molecule crawler prototype(The 50th Annual Meeting of the Biophysical Society of Japan)

Komatsu, Daiki, Fujiwara, Kei, Nomura, Shin-ichiro M.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

665

2SB-02 Protein NMR spectroscopy in the cellular environment(2SB Symposium organized by younger generation: Young scientists pioneering future life sciences,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Inomata, Kohsuke, Murayama, Shuhei, Futaki, Shiro, Hiroaki, Hidekazu, Ito, Yutaka, Tochio, Hidehito, Shirakawa, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

666

2PS006 Torque-speed relationship of the flagellar motor consisting of two distinct stators(The 50th Annual Meeting of the Biophysical Society of Japan)

Terahara, Naoya, Noguchi, Yukina, Nakamura, Syuichi, Kamiike, Nobunori, Ito, Masahiro, Namba, Keiichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 395 KB

english, 2012

667

2PS016 Movement of cortical actin cables is driven by type V myosins in fission yeast cells during interphase(The 50th Annual Meeting of the Biophysical Society of Japan)

Kashiwazaki, Jun, Mabuchi, Issei

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

668

2PS030 Structural stability and rotational characteristics of the flagellar motor of Salmonella MS-ring mutant(The 50th Annual Meeting of the Biophysical Society of Japan)

Taga, Shun, Asaumi, Akira, Nakamura, Shuichi, Hayashi, Fumio, Oosawa, Kenji, Kudo, Seishi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

669

2SC-04 Elastic and geometric origin of the twisted growth of plant organs(2SC Living matter far from equilibrium: from DNA to cytoskeletons and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

670

2PT006 Development of method for predicting carbohydrate binding site using support vector machine(The 50th Annual Meeting of the Biophysical Society of Japan)

Banno, Masaki, Shimizu, Kentaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

671

2PT007 Prediction of Contact Residue Sites Based on Concurrent and Compensatory Substitutions Between Sites in Protein Evolution(The 50th Annual Meeting of the Biophysical Society of Japan)

Miyazawa, Sanzo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

672

2PT011 Analysis of DNA-binding sites using novel amino acid index for molecular recognition (MR-index)(The 50th Annual Meeting of the Biophysical Society of Japan)

Hibino, Katsutoshi, Yokoyama, Yasunori, Mitaku, Shigeki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

673

2PT119 Interactions of SicP with SptP subdomains in SicP-binding domain(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawashima, Yurie, Hayashi, Fumio, Oosawa, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

674

2PT131 Analysis of water molecules in molecular dynamics simulations of H-ras GTP and GDP complexes(The 50th Annual Meeting of the Biophysical Society of Japan)

Miyakawa, Takeshi, Morikawa, Ryota, Takasu, Masako, Sugimori, Kimikazu, Kawaguchi, Kazutomo, Saito, Hiroaki, Nagao, Hidemi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

675

2PT132 Molecular Dynamics of T4 Genome Packaing Motor(The 50th Annual Meeting of the Biophysical Society of Japan)

Takemura, Kazuhiro, Kitao, Akio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

676

2PT134 Molecular dynamics simulation study of Lys48-linked diubiquitin in compact conformation(The 50th Annual Meeting of the Biophysical Society of Japan)

Fuchigami, Sotaro, Ikeguchi, Mitsunori, Kidera, Akinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

677

2SE-06 Molecular motor driven self-organization in Myxococcus xanthus(2SE Harmonized supramolecular machinery for motility and its diversity,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Shaevitz, Joshua W.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

678

2PT208 An investigation on local pseudo-periodicity in the amino-acid sequences of native proteins(The 50th Annual Meeting of the Biophysical Society of Japan)

Inai, Koji, Oka, Masahito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

679

2PT216 Emergence of a spatial structure with a minority molecule in a catalytic reaction network(The 50th Annual Meeting of the Biophysical Society of Japan)

Kamimura, Atsushi, Kaneko, Kunihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

680

2PT220 Growth control mechanism in the Drosophila wing disc(The 50th Annual Meeting of the Biophysical Society of Japan)

Hironaka, Ken-ichi, Iwasa, Yoh, Morishita, Yoshihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

681

3PS024 Development of Diffracted X-ray Tracking measurement system using various wide-band energy X-ray sources(The 50th Annual Meeting of the Biophysical Society of Japan)

Ichiyanagi, Kouhei, Sekiguichi, Hiroshi, Hoshino, Masato, Kajiwara, Kentaro, Nozawa, Shunsuke, Sato, Tokushi, Adachi, Shin-ichi, Yagi, Naoto, Sasaki, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

682

3PS046 A Non-destructive Culturing and Cell Sorting Method for Cardiomyocytes and Neurons Using an Alginate Layer(The 50th Annual Meeting of the Biophysical Society of Japan)

Terazono, Hideyuki, Kim, Hyonchol, Hattori, Akihiro, Nomura, Fumimasa, Kaneko, Tomoyuki, Yasuda, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

683

3PS047 Fabrication of Superparamagnetic Janus Particles Having Various Sizes and Its Application for Non-Destructive Cell Sorting(The 50th Annual Meeting of the Biophysical Society of Japan)

Kim, Hyonchol, Terazono, Hideyuki, Takei, Hiroyuki, Yasuda, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

684

3PT001 Survival strategy of bacteria under the starvation stress by 100S ribosome formation(The 50th Annual Meeting of the Biophysical Society of Japan)

Kato, Takayuki, Ueta, Masami, Miyata, Tomoko, Yoshida, Hideji, Wada, Akira, Namba, Keiichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

685

3PT124 Elucidation of the membrane microdomain assembly mechanism via reconstituted artificial lipid membranes using high performance proteomics(The 50th Annual Meeting of the Biophysical Society of Japan)

Negishi, Lumi, Hosoya, Satoshi, Toda, Osamu, Oosawa, Tsuyoshi, Hirosaki, Ken, Paxton, Thanai, Hayashi, Nobuhiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 404 KB

english, 2012

686

3PT154 UV irradiation driven deformation of photoresponsive molecule doped membrane(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshida, Kazunari, Fujii, Yasuhiro, Nishio, Izumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

687

3PT166 Controlling an ion channel's voltage sensing domain without voltage(The 50th Annual Meeting of the Biophysical Society of Japan)

Bertz, Morten, Kinosita, Kazuhiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

688

3PT168 Trials of large amount expression of mammalian potassium ion channels using cultured mammalian cells for biophysical analyses(The 50th Annual Meeting of the Biophysical Society of Japan)

Tsukaoto, Hisao, Nakajo, Koichi, Kubo, Yoshihiro, Furutani, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 221 KB

english, 2012

689

3PT180 Control of bacterial flagellar rotation via crosstalk from a non-cognate histidine kinase to the response regulator CheY(The 50th Annual Meeting of the Biophysical Society of Japan)

Umemura, Tohru, Hara, Chiho, Sowa, Yoshiyuki, Kawagishi, Ikuro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

690

3PT190 Ensemble Docking Simulation for fa Adrenergic Receptor Using Elastic Network Models(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwamoto, Tomoyuki, Wako, Hiroshi, Endo, Shigeru, Nakamura, Haruki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

691

3PT206 Regulation of GABAergic synapses by IP_3/Ca^ signaling(The 50th Annual Meeting of the Biophysical Society of Japan)

Bannai, Hiroko, Niwa, Fumihiro, Sherwood, Mark W., Arizono, Misa, Miyamoto, Akitoshi, Sugiura, Kotomi, Levi, Sabine, Triller, Antoine, Mikoshiba, Katsuhiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 396 KB

english, 2012

692

1A1522 Selective permeation mechanism through the channel of the stator complex MotA/B in the flagellar motor(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nishihara, Yasutaka, Kitao, Akio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

693

1A1558 Dynamic conformational changes of flagellar filament observed by high-pressure microscopy(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nishiyama, Masayoshi, Sowa, Yoshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

694

1A1610 Flagellar motility inhibition by overexpression of PlzD, a YcgR homolog of c-di-GMP binding protein, in Vibrio alginofyticus(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yoneda, Takuro, Morimoto, Wakako, Kojima, Seiji, Homma, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

695

1G1424 Nanosecond pulsed electric fields act as a novel cellular stress that induces translational suppression(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yano, Ken-ichi, Morotomi-Yano, Keiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

696

1I1448 MODIC : a novel ab inito identification system of transcription factor binding motifs in genome DNA sequences(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tateno, Masaru, Nakaki, Ryo, Kang, Jiyoung

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

697

2A1436 Regulation of cytoplasmic dynein-motility on microtubules by LIS1 revealed by electron-computed tomography(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Toba, Shiori, Koyasako, Kotaro, Hirotsune, Shinji, Yasunaga, Takuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

698

2A1522 The mechanochemical cycle of human cytoplasmic dynein under external force(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kambara, Taketoshi, Tani, Yoshiaki, Kaya, Motoshi, Shima, Tomohiro, Higuchi, Hideo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

699

1SC-03 Colony Formation in Bacteria : Collective Movement of Cells(1SC Frontiers in mathematical methods in biology,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Matsushita, Mitsugu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

700

2B1510 Amyloidogenic Peptides from Hen Lysozyme(Proteins:Structure & Function II:Theory, Aggregation,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tachibana, Hideki, Fujisawa, Masao, Kono, Ryohei, Kato, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

701

2C1436 Mathematical analysis for vascular and spot patterns by auxin and PIN dynamics in plant development(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hayakawa, Yoshinori, Mochizuki, Atsushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

702

2D1546 Fluctuation of cell membrane investigated by ion conductance microscopy(Measurements,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Mizutani, Yusuke, Ichikawa, Satoshi, Ishikura, Zen, Okajima, Takaharu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

703

2G1558 Direct Observation of Ion Entryway of Potassium Channel KcsA in Lipid Bilayer by Atomic Force Microscopy(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sumino, Ayumi, Sumikama, Takashi, Iwamoto, Masayuki, Dewa, Takahisa, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

704

2H1448 Three-dimensional tracking of gliding actin filament in an in vitro motility assay(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Naganawa, Tatsuya, Shimozawa, Togo, Masaike, Tomoko, Nishizaka, Takayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

705

3A1046 Quantification of ATP-driven H^+ transport by thermophilic Bacillus PS3 F_0F_1-ATP synthase reconstituted in a liposomal membrane(Molecular Motors III:F1 ATPase and Mycoplasma,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kasuya, Yuzo, Soga, Naoki, Suzuki, Toshiharu, Yoshida, Masasuke, Kinosita, Kazuhiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

706

3B0900 The cytosolic C-terminal four-helix bundle regulates the gating of prokaryotic sodium channel(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Irie, Katsumasa, Shimomura, Takushi, Fujiyoshi, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

707

1SD-05 Inside view of molecular dynamics of Glucocorticoid Receptor by using Fluorescence Cross Correlation Spectroscopy in living cell(1SD Molecular Dynamics in the Nucleus and Gene Regulation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kinjo, Masataka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

708

1SE-01 Consistency principle of protein conformation and its extension(1SE Conformational dynamics: Folding to function,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

709

1SE-03 New Functions of Zinc Fingers Revealed by Substitution of Conserved Residues(1SE Conformational dynamics: Folding to function,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

710

3C1022 Non-canonical functions of translational factors as RNA replication cofactors(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Takeshita, Daijiro, Tomita, Kozo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

711

3D1046 Electron Transfer Pathway Analysis in Bacterial Photosynthetic Reaction Center(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kitoh-Nishioka, Hirotaka, Ando, Koji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

712

3E1034 Analyses of folding processes on the Ferredokin-like fold proteins by means of a coarse grained Go model(Proteins:Structure,Oral Presentation)

Sugita, Masatake, Kikuchi, Takeshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

713

3F1034 Thermal stabilization of G protein-coupled receptor by non-detergent sulfobetaines (NDSBs)(Membrane Proteins,Oral Presentation)

Yamai, Toshihide, Takahashi, Layla, Nakajima, Masato, Yamashita, Naoki, Ishii, Takeshi, Takeda, Shigeki, Wakamatsu, Kaori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

714

3G0900 Freeze-replica observation of keratinolytic protease complex produced and released from Meiothermus ruber H328(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Kawasaki, Kazunori, Kataoka, Maachi, Nomura, Keiji, Shigeri, Yasushi, Watanabe, Kunihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

715

3G1046 Molecular computing system RTRACS encapsulated in oil-free giant unilamellar vesicle(Biological& Artificial Membranes:Structure & Property,Oral Presentation)

Shohda, Koh-ichiroh, Sugawara, Tadashi, Suyama, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

716

3H0912 Meiotic spindles maintain the symmetrical shape by propagating structural changes to the opposite side(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Suzuki, Kazuya, Takagi, Jun, Itabashi, Takeshi, Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

717

1PS012 47 amino acids repeat of connectin-ilke 4000K-protein in obliquely striated muscle of Annelida(The 50th Annual Meeting of the Biophysical Society of Japan)

Nomiya, Yui, Kanamaru, Shuji, Arisaka, Fumio, Kimura, Sumiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

718

1PS040 Regulation of motor activity of kinesin-6 by phosphorylation of the N-terminal extension domain(The 50th Annual Meeting of the Biophysical Society of Japan)

Sato, Akihiko, Davis, Tim, Yamaguchi, Shin, Mishima, Masanori, Yajima, Junichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

719

1PS042 Multiple kinesin molecules coordinate to ensure the long-distance walking : a DNA-kinesin hybrid nanomachine study(The 50th Annual Meeting of the Biophysical Society of Japan)

Miyazono, Yuya, Endo, Masayuki, Ueda, Takuya, Sugiyama, Hiroshi, Harada, Yoshie, Tadakuma, Hisashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

720

1PS043 Photo-regulation of mitotic kinesin Eg5 using photochromic inhibitors(The 50th Annual Meeting of the Biophysical Society of Japan)

Ishikawa, Kumiko, Seo, Hideo, Touyama, Kanako, Matuta, Shinsaku

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

721

1PT102 Structural change at the flap region of HIV-1 protease associated with darunavir resistance(The 50th Annual Meeting of the Biophysical Society of Japan)

Ode, Hirotaka, Suzuki, Koji, Fujino, Masayuki, Maejima, Masami, Kimura, Yuki, Masaoka, Takashi, Hattori, Junko, Yokomaku, Yoshiyuki, Suzuki, Atsuo, Watanabe, Nobuhisa, Iwatani, Yasumasa, Sugiura, Wata

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

722

1PT104 Crystal structure of the yeast 20S proteasome in complex with new inhibitor(The 50th Annual Meeting of the Biophysical Society of Japan)

Maekawa, Takuma, Nishio, Kazuya, Udin, Bahrudin, Hisatome, Ichiro, Saeki, Yasushi, Tanaka, Keiji, Yamaguchi, Hiroshi, Morimoto, Yukio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

723

1PT106 Solution structure of an autolysin inhibitor IseA from Bacillus subtilis : a novel hacksaw-like fold with a characteristic inhibitory loop(The 50th Annual Meeting of the Biophysical Society of Japan)

Fukui, Sadaharu, Arai, Ryoichi, Kobayashi, Naoya, Li, Hua, Watanabe, Satoru, Sekiguchi, Junichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

724

1PT113 High-pressure-induced water penetration into IPMDH and pressure-adaptation mechanism of the proteins from deep-sea bacteria(The 50th Annual Meeting of the Biophysical Society of Japan)

Nagae, Takayuki, Hamajima, Yuki, Kawamura, Takashi, Niwa, Ken, Hasegawa, Masashi, Kato, Chiaki, Watanabe, Nobuhisa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

725

1SI-02 Structural basis of dynein motility(1SI Exploring force-generating mechanism of molecular motor ensembles; building bridges between single molecules and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

726

1PT142 Ferritin assembly kinetics followed by small-angle X-ray scattering(The 50th Annual Meeting of the Biophysical Society of Japan)

Sato, Daisuke, Inoue, Masayoshi, Sunato, Ayumi, Yamada, Yoshiteru, Ohtomo, Hideaki, Tukamoto, Seiichi, Nakagawa, Kanako, Ikeguchi, Masamichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 404 KB

english, 2012

727

1PT146 In vitro analysis of the early stage of aggregation of tau protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Ikura, Teikichi, Ito, Nobutoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

728

10.2142/biophys.52.cover1

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 20 KB

2012

729

1PT205 Quantification of Glucocorticoid Receptor of homo-dimer in single cell by using Fluorescence Correlation Spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Oasa, Sho, Sasaki, Akira, Mikuni, Shintaro, Kinjo, Masataka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

730

1PT230 Evaluation of microtubule deformation by live cell imaging and image analysis(The 50th Annual Meeting of the Biophysical Society of Japan)

Tanaka, Ryosuke, Mizutani, Takeomi, Haga, Hisashi, Kawabata, Kazushige

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

731

1PT234 Yeast-based ligand assay system for detecting G protein-coupled receptor activation in water-in-oil droplets(The 50th Annual Meeting of the Biophysical Society of Japan)

Sakurai, Takashi, Iizuka, Ryo, Tanigaki, Yasuyuki, Sekine, Rui, Yoon, Dong H., Sekiguchi, Tetsushi, Ishii, Jun, Kondo, Akihiko, Nemoto, Naoto, Shoji, Shuichi, Funatsu, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

732

2PS018 Cooperative conformational changes of actin filaments drive mutually exclusive cooperative binding of cofilin and HMM to the filaments(The 50th Annual Meeting of the Biophysical Society of Japan)

Umeki, Nobuhisa, Uyeda, Taro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

733

2PS022 Structural analysis of gliding machinery and component proteins of Mycoplasma pneumoniae(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawakita, Yoshito, Nakane, Daisuke, Matsuo, Lisa, Kenri, Tsuyoshi, Miyata, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

734

2PS033 Meaning of HAP1 in the length measurement of the hook(The 50th Annual Meeting of the Biophysical Society of Japan)

Dono, Kohei, Uchida, Kaoru, Aizawa, Sin-Ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

735

2PS035 Analysis of microtubule-associated protein 4-mediated interaction between actin filaments and microtubules(The 50th Annual Meeting of the Biophysical Society of Japan)

Saito, Shoma, Kuramoto, Ayumu, Yamasaki, Tsuyoshi, Noguchi, Taro Q.P., Hashi, Yurika, Kotani, Susumu, Tokuraku, Kiyotaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

736

2PS044 Live cell imaging of the growth factor-induced nuclear translocation of ERK in PC12 cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Shindo, Yuki, Mouri, Kazunari, Hibino, Kayo, Tomita, Masaru, Sako, Yasushi, Takahashi, Koichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

737

2PS051 Cell migration dynamics and its relevance to electrotaxis in Dictyostelium cells(The 50th Annual Meeting of the Biophysical Society of Japan)

Takagi, Hiroaki, Sato, Masayuki J., Ueda, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

738

2PT004 Common structural / sequence features of proteins that share non-sequential structural similarity(The 50th Annual Meeting of the Biophysical Society of Japan)

Sawada, Kengo, Minami, Shintaro, Chijenji, Geroge

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

739

2PT008 Supporting system for manual curation of the 3DMET database(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 392 KB

english, 2012

740

2PT109 Structure of L-lysine α-oxidase from Trichoderma viride(The 50th Annual Meeting of the Biophysical Society of Japan)

Sano, Tadahisa, Kawaguchi, Tatsuya, Amano, Marie, Shinyashiki, Kengo, Nakata, Haruka, Tamura, Takashi, Inagaki, Kenji, Kusakabe, Hitoshi, Imada, Katsumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

741

2PT120 Purification and characterization of glycine-proline-fused type of InvC involved in Salmonella type III secretion system(The 50th Annual Meeting of the Biophysical Society of Japan)

Watanabe, Aya, Hayashi, Fumio, Oosawa, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

742

2SD-04 Large scale gene network estimation with K computer(2SD Supercomputing in Molecular Network to Cellular Dynamics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Tamada, Yoshinori, Shimamura, Teppei, Yamaguchi, Rui, Niida, Atsushi, Saito, Ayumu, Kataoka, Yuto, Imoto, Seiya, Nagasaki, Masao, Miyano, Satoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

743

2SD-05 Biological system modeling and data assimilation(2SD Supercomputing in Molecular Network to Cellular Dynamics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

744

2PT154 Effects of the substitutions of Thr or Leu for β145 Tyr on the structure and oxygen binding properties of human hemoglobin(The 50th Annual Meeting of the Biophysical Society of Japan)

Ichii, Momoko, Nagai, Yukifumi, Imai, Kiyohiro, Nagai, Masako

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

745

2SE-03 Structural polymorphism and functional differentiation of actin filaments(2SE Harmonized supramolecular machinery for motility and its diversity,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Uyeda, Taro Q.P., Umeki, Nobuhisa, Kijima, Saku, Nishikawa, Yusuke, Tokuraku, Kiyotaka, Nagasaki, Akira, Noguchi, Taro Q.P.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

746

2PT217 Complex biological networks from the standpoint of the category theoretical duality(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

747

2PT219 Temporal Decoding of MAP Kinase and CREB Phosphorylation by Selective Immediate Early Gene Expression(The 50th Annual Meeting of the Biophysical Society of Japan)

Saito, Takeshi, Uda, Shinsuke, Ozaki, Yu-ichi, Kuroda, Shinya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

748

2PT223 Restriction of the information-coding scheme in the nervous system based on transient dynamics of neuronal activity(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamanobe, Takanobu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

749

2PT230 ATP release from cyanobacterial circadian clock protein KaiC(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwata, Keita, Mutoh, Risa, Onai, Kiyoshi, Ishiura, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 394 KB

english, 2012

750

3PS021 Determination of mole number for trace amount of a peptide based on the ion transfer voltammetry(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshida, Yumi, Morita, Yoshiro, Nakamura, Shotaro, Uchida, Junya, Maeda, Kohji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

751

3PS037 Ranian microscopy distinguishes the status of differentiating cell(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshida, Muneki, Ichimura, Taro, Liang-da, Chiu, Fujita, Katsumasa, Watanabe, Tomonobu, Fujita, Hideaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

752

3PS049 Quantitative evaluation of cell separation method based on shape recognition using on-chip imaging cell sorter(The 50th Annual Meeting of the Biophysical Society of Japan)

Hattori, Akihiro, Kaneko, Tomoyuki, Nomura, Fumimasa, Yasuda, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 413 KB

english, 2012

753

3PT003 A study on deaminase activity of APOBEC3C by NMR(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwaoka, Ryo, Kitamura, Shingo, Kanba, Keisuke, Furukawa, Ayako, Okamura, Hideyasu, Sugiura, Wataru, Nagata, Takashi, Iwatani, Yasumasa, Katahira, Masato

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

754

3PT115 Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket(The 50th Annual Meeting of the Biophysical Society of Japan)

Sakurai, Keisuke, Nakashima, Ryosuke, Yamasaki, Seiji, Nishino, Kunihiko, Yamaguchi, Akihito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

755

3PT116 Entropic release of a big sphere from a cylindrical vessel(The 50th Annual Meeting of the Biophysical Society of Japan)

Mishima, Hirokazu, Oshima, Hiraku, Yasuda, Satoshi, Amano, Ken-ichi, Kinoshita, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

756

3PT137 SWAXS study of thermal structural stability of liposomes entrapping proteins(The 50th Annual Meeting of the Biophysical Society of Japan)

Kimura, Ryota, Hirai, Mitsuhiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 205 KB

english, 2012

757

3PT144 Study on phase transition of coarse-grained lipid bilayer by REMD simulations(The 50th Annual Meeting of the Biophysical Society of Japan)

Nagai, Tetsuro, Okamoto, Yuko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

758

3PT163 Automated Drug Screening System for Ion Channel Proteins using Artificial Cell Membranes(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawano, Ryuji, Tsuji, Yotaro, Kamiya, Koki, Osaki, Toshihisa, Hirano, Minako, Ide, Toru, Miki, Norihisa, Takeuchi, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

759

3PT169 Membrane disc formation from tetraether-type artificial phospholipids and apolipoproteins(The 50th Annual Meeting of the Biophysical Society of Japan)

Baba, Teruhiko, Takagi, Toshiyuki, Kanamori, Toshiyuki, Handa, Daisuke, Oka, Tatsuya, Saito, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 221 KB

english, 2012

760

3PT176 Promotion of DNA delivery into nucleus dramatically enhances the transfection efficiency mediated by biosurfactant-containing liposomes(The 50th Annual Meeting of the Biophysical Society of Japan)

Inoh, Yoshikazu, Furuno, Tadahide, Hirashima, Naohide, Kitamoto, Dai, Nakanishi, Mamoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

761

3PT208 Binomial distribution analysis of increase of transmitter release depending on [Ca^]_e at the frog neuromuscular junction(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsuda, Taisuke, Suzuki, Naoya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

762

3PT233 Molecular mechanisms for the thermostabilization of cytochrome c' from the thermophilic purple sulfur bacterium Thermochromatium tepidum(The 50th Annual Meeting of the Biophysical Society of Japan)

Kasuga, Sachiko, Kimura, Yukihiro, Furusawa, Kei, Ohno, Takashi, Otomo, Seiu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 407 KB

english, 2012

763

3PT236 Light-harvesting Antenna Phosphorylation Enhances Protein Mobility in Thylakoid Membranes(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwai, Masakazu, Pack, Changi, Takenaka, Yoshiko, Sako, Yasushi, Nakano, Akihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

764

1SA-03 Genetically encoded luminescent probes(1SA Bridging single molecule biology and biochemistry to understand operation principles of blo-nanosystems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Nagai, Takeharu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

765

1B1510 Global analysis of aggregation-inhibotion effects of molecular chaperones using a reconstituted cell-free translation system(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Niwa, Tatsuya, Ueda, Takuya, Taguchi, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

766

1D1534 Insulin and glucose for memory in a snail(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ito, Etsuro, Okada, Ryuichi, Morikawa, Mika, Takigami, Satoshi, Okuta, Akiko, Sakakibara, Manabu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

767

1D1610 De novo sequencing and transcriptome analysis of the molluscan brain by deep RNA sequencing(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sadamoto, Hisayo, Takahashi, Hironobu, Okada, Taketo, Kenmoku, Hiromichi, Asakawa, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

768

1F1522 Large deformation of helix F upon formation of the M intermediate of the azide-bound purple form of pharaonis halorhodopsin(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nakanishi, Tichi, Kanada, Soun, Murakami, Midori, Ihara, Kunio, Kouyama, Tsutomu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

769

1G1522 Effects of conformational fluctuation of chromosomes in budding yeast on the pattern of gene expression(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tokuda, Naoko, Sasai, Masaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

770

1G1610 Interaction between heregulin and ErbB proteins varies dynamically shown by single-molecule kinetic analysis in living cells(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hiroshima, Michio, Saeki, Yuko, Okada-Hatakeyama, Mariko, Sako, Yasushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

771

1I1558 Electrochemical regulation of bacterial respiratory activity of Shewanella, a dissimilatory metal reducing bacteria(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Matsuda, Shoichi, Liu, Huan, Nakanishi, Shuji, Hashimoto, Kazuhito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

772

2A1610 Molecular mechanism of cell-cycle dependent nuclear envelope localization of Bicaudal-D2(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Murayama, Takashi, Ota, Hiroki, Sakurai, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 390 KB

english, 2012

773

2C1522 Modeling the mammalian circadian clock(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Jolley, Craig, Ueda, Hiroki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

774

2C1610 Characterization of Death and Division Process in Synthetic Bacterial Population with Antibiotic Treatment(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nozoe, Takashi, Okura, Reiko, Wakamoto, Yuichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 389 KB

english, 2012

775

2D1436 Evaluation of Ultrasound Irradiation effects on Cells by using Raman Spectroscopy(Measurements,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sugimoto, Manabu, Otsuka, Yo, Murakami, Shinya, Mitsui, Toshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

776

2F1412 Mechanism of color change of proteorhodopsin by mutations at distant cytoplasmic loop(Photobiology:Vision & Photoreception II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ozaki, Yuya, Abe-Yoshizumi, Rei, Yoshizawa, Susumu, Kogure, Kazuhiro, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 398 KB

english, 2012

777

2G1436 Localization of bulky-molecules in raft-like domains on phase-separated liposomes : Control of domain size and bursting rate of liposome(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yanagisawa, Miho, Baigl, Damien, Yoshikawa, Kenichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

778

2H1558 Stability of Myofilament Lattice in Striated Muscle Sarcomere(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Takemori, Shigeru, Kimura, Masako, Yamaguchi, Maki, Ohno, Tetsuo, Nakahara, Naoya, Yokomizo, Shunnya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

779

3A1022 None of the rotor residues of F_1-ATPase are essential for torque generation(Molecular Motors III:F1 ATPase and Mycoplasma,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Chiwata, Ryohei, Kawakami, Tomoya, Kohori, Ayako, Furuike, Shou, Shiroguchi, Katsuyuki, Sutoh, Kazuo, Yoshida, Masasuke, Kinosita, Kazuhiko Jr.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

780

3C0936 Development of intelligent ribozyme whose activity switches on in response to K^+ via quadruplex formation(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamaoki, Yudai, Mashima, Tsukasa, Sakurai, Yu, Hara, Yukari, Nagata, Takashi, Katahira, Masato

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

781

3D1010 X-ray dose dependence of time-averaged XRD structure of multi-photoreduced Mn_4CaO_5H_x clusters in photosystem II at low temperature(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kusunoki, Masami

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

782

3D1022 Determination of magnetic couplings of S_2 state Mn-cluster in Photosystem II studied by PELDOR measurement(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Asada, Mizue, Nagashima, Hiroki, Koua, Faisal Hammad Mekky, Shen, Jian-Ren, Mino, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

783

1PS003 Dielectric analysis of hydration change of actin by polymerization(The 50th Annual Meeting of the Biophysical Society of Japan)

Imao, Asato, Okazaki, Yuichiro, Wazawa, Tetsuichi, Mogami, George, Suzuki, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

784

1PS011 Connectin-like protein in molluscan striated muscle(The 50th Annual Meeting of the Biophysical Society of Japan)

Bao, Yulong, Hanashima, Akira, Sodeyama, Fumiaki, Kimura, Sumiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

785

1PS020 Free energy calculation of lever-arm swing of myosin and the effect of actin filament(The 50th Annual Meeting of the Biophysical Society of Japan)

Ohnuki, Jun, Sato, Takato, Umezawa, Koji, Takano, Mitsunori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

786

1PS030 ATP synthesis by elastically coupled nanomotors(The 50th Annual Meeting of the Biophysical Society of Japan)

Imafuku, Yasuhiro, Gustafsson, Nils, Thomas, Neil

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

787

1PS033 Direct observation of H^+-driven rotation of F_0F_1-ATP synthase(The 50th Annual Meeting of the Biophysical Society of Japan)

Watanabe, Rikiya, Tabata, Kazuhito V., Iino, Ryota, Noji, Hiroyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 396 KB

english, 2012

788

1PS038 Structural dynamics of necklinker docking, interlinker strain and nucleotide-to-linker transmission in kinesin probed by spin-label ESR(The 50th Annual Meeting of the Biophysical Society of Japan)

Yasuda, Satoshi, Takai, Shinji, Yamada, Masafumi D., Maruta, Shinsaku, Arata, Toshiaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

789

1PT114 Amyloid-Fibrillation of Lysozyme Is Enhanced by C64-C80 and C76-C94 Disulfide Bonds(The 50th Annual Meeting of the Biophysical Society of Japan)

Kono, Ryohei, Shinohara, Kaoru, Fujita, Yutaro, Tachibana, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 401 KB

english, 2012

790

1PT150 Site-specific collapse of staphylococcal nuclease during the folding followed by Forster resonance energy transfer(The 50th Annual Meeting of the Biophysical Society of Japan)

Mizukami, Takuya, Xu, Ming, Roder, Heinrich, Maki, Kosuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

791

1PT159 STABILITY OF FOLDING INTERMEDIATE AFFECTS THE AMYLOIDOGENIC PROPENSITY OF IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN(The 50th Annual Meeting of the Biophysical Society of Japan)

Kobayashi, Yuta, Tashiro, Yuki, Ikeda, Kyohei, Abe, Tetsuyuki, Hamada, Daizo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

792

1PT173 Molecular dynamics simulation of epiregulin and its antibody(The 50th Annual Meeting of the Biophysical Society of Japan)

Shinoda, Keiko, Fujitani, Hideaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

793

3H0900 Large Conformational Changes in Tubulin in the GTP- and GDPStates Microtubules Observed by Cryo Electron Microscopy(Cell Biology III:Cytoskeleton & Motility,Oral Presentation)

Yajima, Hiroaki, Ogura, Toshihiko, Nitta, Ryo, Okada, Yasushi, Sato, Chikara, Hirokawa, Nobutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

794

10.2142/biophys.52.cover2

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 44 KB

2012

795

2SB-01 Examining origins of noise in gene expression(2SB Symposium organized by younger generation: Young scientists pioneering future life sciences,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Taniguchi, Yuichi, Ogawa, Yutaka, Johmura, Masae

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

796

2PS001 Rotation Measurement of Na^+ -driven Chimeric Flagellar Motor with Tandem PomA(The 50th Annual Meeting of the Biophysical Society of Japan)

Che, Yong-Suk, Sowa, Yoshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

797

2PS014 Effect of mutation of the SH1 helix region of Dictyosterium myosin II on the motile characteristics(The 50th Annual Meeting of the Biophysical Society of Japan)

Koyama, Tsubasa, Maruta, Takahiro, Iwai, Sosuke, Chaen, Shigeru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

798

2PS038 Photo-regulation of cell division using photochromic inhibitors for kinesin Eg5(The 50th Annual Meeting of the Biophysical Society of Japan)

Sadakane, Kei, Ishikawa, Kumiko, Seo, Hideo, Yamanoha, Banri, Maruta, Shinsaku

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

799

2SC-02 Large-scale vortex lattice of microtubules driven by dyneins(2SC Living matter far from equilibrium: from DNA to cytoskeletons and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Nagai, Ken, Sumino, Yutaka, Oiwa, Kazuhiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

800

2PT133 Coarse-grained MD simulations of ligand binding to proteins : Effect of the conformational changes of the proteins(The 50th Annual Meeting of the Biophysical Society of Japan)

Negami, Tatsuki, Terada, Tohru, Shimizu, Kentaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

801

2PT144 Solubilization approaches of artificial three-stranded beta-helix by fusing SlyD protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Nishijo, Kaname, Kanamaru, Shuji, Arisaka, Fumio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

802

2PT147 In vitro selection of a protease using cDNA display(The 50th Annual Meeting of the Biophysical Society of Japan)

Ueno, Shingo, Mashio, Yuka, Ichiki, Takanori, Nemoto, Naoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 202 KB

english, 2012

803

2PT148 Screening of mutant proteins scaffolding human cellular retinoic acid binding protein 2(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakada, Hinako, Itoh, Nobuya, Makino, Yoshihide

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 202 KB

english, 2012

804

2PT167 Theoretical analysis of the electronic structure of CuB site of bovine cytochrome c oxidase(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsuoka, Toru, Kang, Jiyoung, Tateno, Masaru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 403 KB

english, 2012

805

2PT173 The role of hydrogen bonding network around the chromophore for the interaction of Rc-PYP(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamazaki, Yoichi, Shimada, Mayu, Kamikubo, Hironari, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

806

2PT221 Optimal Behavior in Endosymbiosis in Green Paramecium(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

807

2PT229 The regulation of cyanobacterial circadian clock proteins KaiB-KaiC interaction by ATP(The 50th Annual Meeting of the Biophysical Society of Japan)

Mutoh, Risa, Nishimura, Atsuhito, Yasui, So, Onai, Kiyoshi, Ishiura, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

808

2PT237 Numerical investigation with Hill equation on approximated nonlinear autonomous dynamical systems(The 50th Annual Meeting of the Biophysical Society of Japan)

Chikayama, Eisuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 338 KB

english, 2012

809

3PS022 On-chip quasi-in vivo cardiac toxicity assay using ring-shaped closed circuit microelectrode with lined-up cardiomyocyte network(The 50th Annual Meeting of the Biophysical Society of Japan)

Nomura, Fumimasa, Kaneko, Tomoyuki, Hamada, Tomoyo, Yasuda, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

810

3PS027 Evaluation of plant cells using time-of-flight secondary ion mass spectrometry and multivariate curve resolution(The 50th Annual Meeting of the Biophysical Society of Japan)

Aoyagi, Satoka, Kodani, Noriko, Kuroda, Katsushi, Fukushima, Kazuhiko, Kayano, Isao, Mochizuki, Seiichi, Yano, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

811

3PT140 Effects of Transportan-10 on Membrane Permeability and Structure of Single Giant Unilamellar Vesicles of DOPC membranes(The 50th Annual Meeting of the Biophysical Society of Japan)

Ariyama, Hirotaka, Yamazaki, Masahito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

812

3PT172 Dynamics of normal prion protein, a raft-associated GPI-anchored molecule, in the live neuronal plasma membrane(The 50th Annual Meeting of the Biophysical Society of Japan)

Nemoto, Yuri L., Nakada, Chieko, Hijikata, Hiroko, Fujiwara, Takahiro K., Kasai, Rinshi S., Ishikawa, Yoshiro, Shibata, Akihiro C. E., Chadda, Ankita, Morris, Roger J., Kusumi, Akihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 411 KB

english, 2012

813

3PT227 A study of QM/Langevin-MD simulation and vibrational analysis for photosystem II in early process of photosynthesis(The 50th Annual Meeting of the Biophysical Society of Japan)

Uchida, Waka, Kimura, Yoshiro, Yuki, Taichi, Hatakeyama, Makoto, Ogata, Koji, Yokojima, Satoshi, Nakamura, Shinichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

814

3PT230 Theoretical Study on the Protonation and Electronic Spin State of the O2-Evolving Complex in Photosystem II at the dark stable S1 state(The 50th Annual Meeting of the Biophysical Society of Japan)

Hatakeyama, Makoto, Uchida, Waka, Ogata, Kouji, Yokojima, Satoshi, Nakamura, Shinichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

815

3PT232 A study of molecular dynamics simulation on Photosystem II protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Ogata, Koji, Hatakeyama, Makoto, Yuki, Taichi, Uchida, Waka, Nakamura, Shinichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

816

2SI-05 Development of scanning probe methods for investigating structures and charge transfers at material interfaces(2SI The art of energetic and functional efficiency in biomoiecular machines on the single molecule level,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kimura, Kenjiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 102 KB

english, 2012

817

10.2142/biophys.52.s199_2

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 191 KB

2012

818

10.2142/biophys.52.s200_2

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 141 KB

2012

819

1C1558 Development of novel rapid buffer-exchange system and microfluidic mixer for time-resolved spectroscopic study of low-yield biomolecules(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kimura, Tetsunari, Furutani, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

820

1D1558 A new class of con focal microscope for a fast voltage-sensitive dye (VSD) and Ca^ imaging(Development, Differentiation, Neuroscience,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tominaga, Takashi, Tominaga, Yoko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

821

1E1436 Distinguishing crystal-like amyloid fibrils and glass-like amorphous aggregates from their kinetics of formation(Proteins: Property I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshimura, Yuichi, Lin, Yuxi, Yagi, Hisashi, Lee, Young-Ho, Kitayama, Hiroki, Sakurai, Kazumasa, So, Masatomo, Ogi, Hirotsugu, Naiki, Hironobu, Goto, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

822

1SA-07 Molecular mechanism of bacterial flagellar construction and its regulation(1SA Bridging single molecule biology and biochemistry to understand operation principles of blo-nanosystems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Imada, Katsumi, Minamino, Tohru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

823

1SB-02 Proteins as Mechano-Chemical Transducer(1SB Body-cell dynamic linkage: softness, flexibility, fluctuation and controllability,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Akasaka, Kazuyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

824

1SB-04 Flexibility of human body with multi-segmental structure enabling bipedal standing(1SB Body-cell dynamic linkage: softness, flexibility, fluctuation and controllability,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Atomi, Tomoaki, Hirose, Noboru, Shimizu, Miho, Atomi, Yoriko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

825

1SC-01 Singular limit analysis : Understanding of biological pattern formation(1SC Frontiers in mathematical methods in biology,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Mimura, Yasumasa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

826

2E1436 A Molecular Mechanism of Induced-fit of U1A Protein(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kurisaki, Ikuo, Takayanagi, Masayoshi, Nagaoka, Masataka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

827

2E1534 Analysis of amino acid contributions to protein solubility using short peptide tags fused to a simplified BPTI variant(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kuroda, Yutaka, M. Khan, Alam, M. Islam, Mohammad

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 404 KB

english, 2012

828

2E1610 Regulatory Mechanism of the fluorescence emission from Green Fluorescent Protein Chromophore(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Torii, Jumpei, Yamashita, Shoji, Nishimoto, Etsuko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

829

2F1436 FTIR study of Aureochrome that possesses LOV domain at the C-terminus(Photobiology:Vision & Photoreception II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ito, Shota, Zhang, You, Iwata, Tatsuya, Hisatomi, Osamu, Takahashi, Fumio, Kataoka, Hironao, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

830

1SD-03 Differences in dissociation free-energy profiles between cognite and non-cognite protein-DNA complexes(1SD Molecular Dynamics in the Nucleus and Gene Regulation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Yonetani, Yoshiteru, Kono, Hidetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

831

2G1510 Elucidation of lipid transfer mechanism of phospholipid transfer protein Sec14(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Takahashi, Chisato, Yamada, Makiko, Wakabayashi, Masaki, Ishihama, Yasushi, Nakano, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

832

2G1534 Single molecular observation of CFTR channels by high speed AFM(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamashita, Hayato, Mio, Kazuhiro, Mio, Muneyo, Uchihashi, Takayuki, Yasui, Masato, Ando, Toshio, Sohma, Yoshiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

833

2H1534 Adhesion of heat-denatured myosin molecules to myosin filament at high salt concentration(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Shimada, Masato, Takai, Eisuke, Ejima, Daisuke, Shiraki, Kentaro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

834

3C0924 Folding of a Single Giant Duplex DNA Chain Expresses Contrastive Behaviors depending on the Length of Cationic Polymer(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Akitaya, Tatsuo, Hazemoto, Norio, Kanbe, Toshio, Demura, Makoto, Yamaguchi, Hideaki, Kubo, Koji, Zinchenko, Anatoly, Murata, Shizuaki, Yoshikawa, Kenichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

835

3C1058 Single-molecule force measurement for the interaction between ribosome and SecM arrest sequence(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yang, Zhuohao, Iizuka, Ryo, Funatsu, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

836

3E1046 Optimization of protein model structures according to statistical potentials with different reference states(Proteins:Structure,Oral Presentation)

Shirota, Matsuyuki, Kinoshita, Kengo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

837

3E1058 Studies on a Aβ fragment by the Coulomb replica-exchange method(Proteins:Structure,Oral Presentation)

Itoh, Satoru, Okumura, Hisashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

838

3F1022 Single amino acid substitution in the transmembrane domain of metabotropic glutamate receptor changes an agonist into an inverse agonist(Membrane Proteins,Oral Presentation)

Yanagawa, Masataka, Yamashita, Takahiro, Shichida, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

839

1SF-02 Synchronization of rotaional movement in mouse node cilia during left-right determination(1SF Theoretical Approaches to Biological Motion and Deformation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Takamatsu, Atsuko, Shinohara, Kyosuke, Ishikawa, Takuji, Hamada, Hiroshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

840

3I0924 Effects of Heme Rotation around the Heme Normal by 90° on Resonance Raman Spectra of Heme Proteins : Observation for Heme Oxygenase(Heme Proteins,Oral Presentation)

Yanagisawa, Sachiko, Fujii, Hiroshi, Neya, Saburo, Ogura, Takashi, Kitagawa, Teizo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

841

3I0948 Strategy of a variety of organisms for the fine-tuning of heme oxygenase reactions : Stabilization of the oxyheme intermediate(Heme Proteins,Oral Presentation)

Takada, Sayuri, Migita, Taiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

842

1PS002 Temperature dependence of hydration properties of F-actin by dielectric relaxation spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Okazaki, Yuichiro, Imao, Asato, Ishida, Noriyoshi, Mogami, George, Wazawa, Tetsuichi, Suzuki, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

843

1PS007 The effects of two kinds TM(TM1,TM2) to Mg-ATPase activity of hokki retractor muscle NAM(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

844

1PT111 NMR Study of Bombyx mon liquid silk(The 50th Annual Meeting of the Biophysical Society of Japan)

Suzuki, Yu, Yamazaki, Toshimasa, Aoki, Akihiro, Asakura, Tetsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

845

1PT137 Effects of sugars on the thermal stability of proteins(The 50th Annual Meeting of the Biophysical Society of Japan)

Oshima, Hiraku, Amano, Ken-ichi, Kinoshita, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

846

1PT145 Correlation of the dynamics of β_2-microglobulin fragments with their amyloidogenicity(The 50th Annual Meeting of the Biophysical Society of Japan)

Takeda, Mahoshi, Sakurai, Kazumasa, Ikegami, Takahisa, Naiki, Hironobu, Goto, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

847

1PT164 Functional and Stopped-flow analysis of circularly permutated GroEL mutant CP86(The 50th Annual Meeting of the Biophysical Society of Japan)

Mizuta, Toshifumi, Uemura, Tatsuya, Hirayama, Takuma, Hongo, Kunihiro, Kawata, Yasushi, Mizobata, Tomohiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

848

1PT166 Comparison of the conformational transitions of DHFR bound to the different ligands using the chameleon model(The 50th Annual Meeting of the Biophysical Society of Japan)

Kimura, Toru, Sasai, Masaki, Terada, Tomoki P.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

849

1PT169 Calculation of local dielectric constants of proteins using dipole-dipole correlations(The 50th Annual Meeting of the Biophysical Society of Japan)

Konno, Asahi, Narita, Jun, Fukunaga, Kentaro, Umezawa, Koji, Takano, Mitsunori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 391 KB

english, 2012

850

1PT214 PLS regression analysis of Signal transduction network and phenotypes in PC12 cell(The 50th Annual Meeting of the Biophysical Society of Japan)

Akimoto, Yuki, Yugi, Katsuyuki, Uda, Shinsuke, Kuroda, Shinya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 396 KB

english, 2012

851

1PT215 Synthetic biology of stem cells : creating artificial gene network of "differentiation"(The 50th Annual Meeting of the Biophysical Society of Japan)

Ono, Sumire, Okura, Reiko, Wakamoto, Yuichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

852

2PS012 Counteractive effect of urea and trimethylamine N-oxide on the activity of the actomyosin motor(The 50th Annual Meeting of the Biophysical Society of Japan)

Hatori, Kuniyuki, Kumemoto, Ryusei

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

853

2PS047 Trajectory analysis of Navicula pavillardii cells by using an arc pattern(The 50th Annual Meeting of the Biophysical Society of Japan)

Umemura, Kazuo, Haneda, Takahiro, Kumashiro, Yoshikazu, Itoga, Kazuyoshi, Okano, Teruo, Mayama, Shigeki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

854

2PT112 Role of the Tyr residue stacked on the si-face of the isoalloxazine ring moiety in ferredoxin-NADP^+ oxidoreductase from Bacillus subtilis(The 50th Annual Meeting of the Biophysical Society of Japan)

Seo, Daisuke, Naito, Hiroshi, Nishimura, Erika, Sakurai, Takeshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

855

2PT116 Study of the Fatty Acid Binding Mechanism to Human Heart Fatty Acid Binding Protein (FABP3)(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsuoka, Daisuke, Matsuoka, Shigeru, Hirose, Mika, Niiyama, Mayumi, Ishida, Hanako, Sato, Fuminori, Sugiyama, Shigeru, Murata, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

856

2PT130 Large-scale conformational changes of SERCA analyzed by Motion Tree method(The 50th Annual Meeting of the Biophysical Society of Japan)

Kobayashi, Chigusa, Koike, Ryotaro, Ota, Motonori, Sugita, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

857

2PT155 Oxygen consumption activity of cbb_3-type cytochrome c oxidase(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwamoto, Yui, Ando, Yuriko, Muramoto, Kazumasa, Gennis, Robert, Shiro, Yoshitsugu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

858

2PT171 Photoreaction of PYP domain regulates the structural change during the photoreaction of phytochrome domain of Ppr(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshida, Keito, Kamikubo, Hironori, Yonezawa, Kento, Yamazaki, Yoichi, Yamaguchi, Mariko, Kataoka, Mikio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

859

2PT175 Comparison of the photochemical reaction between the LOV domain and the LOV-linker domain of a blue light sensor protein YtvA(The 50th Annual Meeting of the Biophysical Society of Japan)

Choi, Seokwoo, Nakasone, Yusuke, Hellingwerf, Klaas, Terazima, Masahide

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

860

2PT177 Photo-induced proton transfer of Anabaena sensory rhodopsin(The 50th Annual Meeting of the Biophysical Society of Japan)

Hasemi, Takatoshi, Kikukawa, Takashi, Kamiya, Masakatsu, Aizawa, Tomoyasu, Kawano, Keiichi, Jung, Kwang-Hwan, Kamo, Naoki, Demura, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 401 KB

english, 2012

861

3PS020 Optimization of electrical stimulation protocol for cardiac beat control with extracellular potential measurement in cardiotoxicity test(The 50th Annual Meeting of the Biophysical Society of Japan)

Kaneko, Tomoyuki, Nomura, Fumimasa, Hamada, Tomoyo, Yasuda, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

862

3PS051 Patterning for human iPS cells by adsorption mixture of proteins on PDMS surface(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamada, Ryotaro, Hattori, Koji, Sugiura, Shinji, Kanamori, Toshiyuki, Ohnuma, Kiyoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

863

3PT157 Surface tension replica exchange molecular dynamics method for an efficient sampling of lipid bilayer structures(The 50th Annual Meeting of the Biophysical Society of Japan)

Mori, Takaharu, Sugita, Yuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

864

3PT177 Effects of Ca2+ on liposomal membrane fusion that mimics mast cell exocytosis(The 50th Annual Meeting of the Biophysical Society of Japan)

Tadokoro, Satoshi, Nagai, Yumiko, Sakiyama, Hiroki, Hirashima, Naohide

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

865

1SA-05 Human genome organization and dynamics(1SA Bridging single molecule biology and biochemistry to understand operation principles of blo-nanosystems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Maeshima, Kazuhiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

866

1B1448 Microtubule-binding sites of EB1 CH domain revealed by transferred cross-saturation experiments(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kanaba, Teppei, Maesaki, Ryoko, Mori, Tomoyuki, Ito, Yutaka, Hakoshima, Toshio, Mishima, Masaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

867

1B1522 Local conformational changes of proteins in DNA interfaces(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sunami, Tomoko, Kono, Hidetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

868

1C1436 Exploring cyclic peptide inhibitors against the Akt2 kinase by the RaPID system and evaluation of their biochemical properties(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hayashi, Yuuki, Morimoto, Jumpei, Suga, Hiroaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 221 KB

english, 2012

869

1G1534 Darwinian Evolution of artificial self-replication system(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ichihashi, Norikazu, Yomo, Tetsuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

870

1I1522 Construction of a nucleic-acid-responsive DNA synthesis system for diagnostic DNA-based computing(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Komiya, Ken, Kobayashi, Asako, Yamamura, Masayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

871

2E1510 The effect of flexibility on the stability of Human Leucocyte Antigen(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yanaka, Saeko, Sugase, Kenjji, Ueno, Takamasa, Tsumoto, Kouhei

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

872

2I1534 Synergetic effects of the mutations of charged residues between the rotor and the stator in the Na^+-driven flagellar motor(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Takekawa, Norihiro, Kojima, Seiji, Homma, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

873

3D1058 Electrochemical regulation of gene expression profiles of Rhodopseudomonas, a photosynthesis bacterium(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Lu, Yue, Matsuda, Syoichi, Nakanishi, Shuji, Hashimoto, Kazuhito

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

874

1PT006 Single molecule analysis for the energy conversion of actomyosin in the presence of osmolyte(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujita, Keisuke, Itoh, Koji, Iwane, Atsuko, Yanagida, Toshio, Iwaki, Mitsuhiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

875

1PT009 Physical Properties of Protein Hydaration. : IV. Quantitative Analysis of Hydration-Site Dynamics(The 50th Annual Meeting of the Biophysical Society of Japan)

Soda, Kunitsugu, Shimbo, Yudai, Seki, Yasutaka, Taiji, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 393 KB

english, 2012

876

1PT162 Measurement of the association constant of a G3LEA protein or its model peptide with lysozyme in aqueous solution(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamakawa, Kentaro, Furuki, Takao, Hatanaka, Rie, Furusawa, Hiroyuki, Kikawada, Takahiro, Okahata, Yoshio, Tunnacliffe, Alan, Sakurai, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

877

1SA-06 Systems and Synthetic Biology of Biological Timings(1SA Bridging single molecule biology and biochemistry to understand operation principles of blo-nanosystems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 392 KB

english, 2012

878

1H1534 Anti-charging Phase Plates for Phase Contrast Electron Microscopy(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nagayama, Kuniaki, Itoh, Toshiyuki, Kayama, Yoko, Saitoh, Zenpei, Nagatani, Yukinori, Arai, Yoshihiro, Ohara, Masahiro, Kai, Noriko, Murata, Kazuyoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

879

2PS023 Directed binding of Mycoplasma mobile may cause directed displacement in gliding(The 50th Annual Meeting of the Biophysical Society of Japan)

Tanaka, Akihiro, Nakane, Daisuke, Nishizaka, Takayuki, Miyata, Makoto

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

880

2PT123 Current Status of Small-Angle X-ray Scattering Beamlines at Photon Factory(The 50th Annual Meeting of the Biophysical Society of Japan)

Shimizu, Nobutaka, Igarashi, Noriyuki, Mori, Takeharu, Ohta, Hiromasa, Nagatani, Yasuko, Kosuge, Takashi, Ito, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

881

3PS018 AFM studies on the spread films of protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 393 KB

english, 2012

882

2SF-03 Information coding of ERK signaling networks(2SF Inherent variability and information coding in biological systems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kuroda, Shinya, Uda, Shinsuke, Saito, Takeshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

883

3PT129 Characterization by mutagenesis analysis of putative proton transfer pathway, D-pathway of bovine heart cytochrome c oxidase(The 50th Annual Meeting of the Biophysical Society of Japan)

Aminaka, Ryohta, Itoh, Mai, Shimokata, Kunitoshi, Katayama, Yukie, Tsukihara, Tomitake, Yoshikawa, Shinya, Shimada, Hideo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

884

3PT222 QM/MM study on the reaction mechanism of assimilatory nitrite reductase(The 50th Annual Meeting of the Biophysical Society of Japan)

Shoji, Mitsuo, Hanaoka, Kyohei, Kondo, Daiki, Umeda, Hiroaki, Kayanuma, Megumi, Kamiya, Katsumasa, Shiraishi, Kenji, Nakano, Shogo, Katayanagi, Katsuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

885

2SI-03 Observation of vibrational absorption of single proteins at few Kelvins(2SI The art of energetic and functional efficiency in biomoiecular machines on the single molecule level,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Fujiyoshi, Satoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 224 KB

english, 2012

886

2A1534 Rotation of microtubules driven by Tetrahymena 22S outer arm dynein and its sub-particles(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yamaguchi, Shin, Toyoshima, Yoko, Yajima, Junichiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

887

3B0936 Mechanical control of light-induced protein conformational change of photoactive yellow protein(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Imamoto, Yasushi, Matsuyama, Take, Shichida, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

888

1PT140 Conformation change in peptide fragments of human prion protein caused by metal binding(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwama, Kazuya, Imaki, Takahito, Yagi, Masahiro, Hiraoka, Wakako

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

889

1C1424 Fluorescent Probe for the Direct Detection of Histone Deacetylase Activity(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Dhara, Koushik, Hori, Yuichiro, Baba, Reisuke, Kikuchi, Kazuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 221 KB

english, 2012

890

2PT127 Development of a functional and structural annotation tool of novel protein isoforms produced by alternative splicing(The 50th Annual Meeting of the Biophysical Society of Japan)

Shionyu, Masafumi, Takahashi, Ken-ichi, Go, Mitiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

891

3PT126 Formation of a complex between membrane protein halorhodopsin and carotenoid of bacterioruberin in the solubilized system(The 50th Annual Meeting of the Biophysical Society of Japan)

Sasaki, Takanori, Razak, Nur Wahida Abdul, Kato, Noritaka, Mukai, Yuri

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

892

3PT221 Laser confocal imaging of various spatiotemporal activity patterns in the CA1 region of mouse hippocampal slices(The 50th Annual Meeting of the Biophysical Society of Japan)

Osanai, Hiromi, Suzuki, Akiyoshi, Matsumura, Sachiko, Mukai, Hideo, Saito, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

893

3PT238 Effects of inositol hexaphosphate apatite cements on human cells and a biological implication between the cements and ROS(The 50th Annual Meeting of the Biophysical Society of Japan)

Kato, Asuka, Aizawa, Mamoru, Hiraoka, Wakako

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 255 KB

english, 2012

894

1I1534 DNA scaffold logic : logic operation on molecular inputs using FRET cascades(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Nishimura, Takahiro, Ogura, Yusuke, Yamamoto, Hirotsugu, Yamada, Kenji, Tanida, Jun

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

895

2D1448 Two dimensional ammonia sensing by measurement of mass and fluorescence using 7-hydroxy-4-methylcoumarin film and fatty acid(Measurements,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ando, Yuta, Terashita, Masahiro, Matsueda, Ryohei, Tsujiuchi, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

896

2E1400 Mechanical unfolding pathways of holo-myoglobin explored by AFM-based single molecule force spectroscopy(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshida, Aya, Kawakami, Masaru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

897

1PS014 Spontaneous formation of moving actin bundles in vitro(The 50th Annual Meeting of the Biophysical Society of Japan)

Hoshida, Masayuki, Maruko, Yuuto, Honda, Hajime

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

898

1PS041 Local heating of kinesin motors on carbon nanotubes(The 50th Annual Meeting of the Biophysical Society of Japan)

Inoue, Yuichi, Nagata, Mitsunori, Ishijima, Akihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

899

1PT108 Steric-Zipper Structures of β_2-Microglobulin Fragment in Amyloid Fibrils Revealed by Vacuum-Ultraviolet Circular Dichroism Spectroscopy(The 50th Annual Meeting of the Biophysical Society of Japan)

Matsuo, Koichi, Hiramatsu, Hirotsugu, Gekko, Kunihiko, Woody, Robert W.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

900

10.2142/biophys.52._s10_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 310 KB

2012

901

10.2142/biophys.52._s60_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 670 KB

2012

902

1PT186 Comparative survey of image processing packages for electron computed tomography(The 50th Annual Meeting of the Biophysical Society of Japan)

Shen, Nan, Jin, Mingyue, Yasunaga, Takuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 397 KB

english, 2012

903

2PS025 Swarm Dynamics of Vibrio alginolyticus(The 50th Annual Meeting of the Biophysical Society of Japan)

Lin, Szu-Ning, Lo, Chien-Jung

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

904

2SC-03 Non-Gaussian athermal fluctuations in active cytoskeletons(2SC Living matter far from equilibrium: from DNA to cytoskeletons and cells,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Mizuno, Daisuke

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

905

2PT115 The short α2-helix of the phospholipase C-δ1 pleckstrin homology domain contributes to stable IP_3 binding(The 50th Annual Meeting of the Biophysical Society of Japan)

Tanio, Michikazu, Nishimura, Katsuyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

906

2PT152 Essence in oxygen affinity regulation of human adult hemoglobin : Change of Fe-His bond length by quaternary or tertiary structure change(The 50th Annual Meeting of the Biophysical Society of Japan)

Nagatomo, Shigenori, Yamamura, Yasuhisa, Saito, Kazuya

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

907

2PT157 X-ray structural analysis of bovine heart cytochrome c oxidase to clarify redox coupled structural changes at H atom level(The 50th Annual Meeting of the Biophysical Society of Japan)

Yano, Naomine, Muramoto, Kazumasa, Shinzawa-Itoh, Kyoko, Maeda, Tomoko, Yamashita, Eiki, Tsukihara, Tomitake, Yoshikawa, Shinya, Shiro, Yoshitugu

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

908

2PT162 Exclusion of the active site waters by substrate in cytochrome P450cam(The 50th Annual Meeting of the Biophysical Society of Japan)

Kishimoto, Ayaka, Sakurai, Keisuke, Takagi, Kenji, Mizushima, Tsunehiro, Hayashi, Takashi, Shimada, Hideo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

909

2PT169 Transient fluctuation of phototropin LOV2 domain(The 50th Annual Meeting of the Biophysical Society of Japan)

Kuroi, Kunisato, Sato, Francielle, Nakasone, Yusuke, Jikihara, Kazunori, Tokutomi, Satoru, Terazima, Masahide

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

910

2PT187 Theoretical Analysis of Fluorescence Spectra of Firefly Luciferin in Aqueous Solutions(The 50th Annual Meeting of the Biophysical Society of Japan)

Hiyama, Miyabi, Akiyama, Hidefumi, Yamada, Kenta, Koga, Nobuaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 393 KB

english, 2012

911

2PT190 1YS1015 A novel depth perception mechanism based on image defocus in a spider(The 50th Annual Meeting of the Biophysical Society of Japan,Early Research in Biophysics Award Candidate Presentations,Early Research in Biophysics Award)

Nagata, Takashi, Koyanagi, Mitsumasa, Tsukamoto, Hisao, Saeki, Shinjiro, Isono, Kunio, Shichida, Yoshinori, Tokunaga, Fumio, Kinoshita, Michiyo, Arikawa, Kentaro, Terakita, Akihisa

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

912

2PT218 Theoretical study of influence of molecular crowding to enzyme reaction system in vesicle(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujii, Masashi, Nishimori, Hiraku, Awazu, Akinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 391 KB

english, 2012

913

3PS009 In vitro analyses on two adjacent inner-arm dyneins, subspecies e and c(The 50th Annual Meeting of the Biophysical Society of Japan)

Shimizu, Youske, Kojima, Hiroaki, Oiwa, Kazuhiro, Sakakibara, Hitoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

914

3PS011 A high-contrast and low-damage observation method of the unstained biological samples by scanning-electron microscope(The 50th Annual Meeting of the Biophysical Society of Japan)

Ogura, Toshihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

915

3PS013 Quantitative analysis of heat production of brown adipocytes using bimetal cantilever(The 50th Annual Meeting of the Biophysical Society of Japan)

Sato, Masaaki, Toda, Masaya, Inomata, Naoki, Inoue, Yuichi, Ono, Takahito, Ishijima, Akihiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

916

3PS023 Development of Dual Recording Assay for Cardiac Function Measurement using Electrical Field Potential and Optical Image Analysis(The 50th Annual Meeting of the Biophysical Society of Japan)

Shoji, Toru, Kaneko, Tomoyuki, Nomura, Fumimasa, Hattori, Akihiro, Yasuda, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 398 KB

english, 2012

917

2SF-05 Symmetry breaking in mouse development(2SF Inherent variability and information coding in biological systems,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Hiiragi, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

918

3PS026 Automatic similarity identification of 2D diffraction patterns with noisy background for 3D coherent x-ray diffractive imaging(The 50th Annual Meeting of the Biophysical Society of Japan)

Tokuhisa, Atsushi, Joti, Yasumasa, Kono, Hidetoshi, Go, Nobuhiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

919

3PT010 Molecular Dynamics Simulations of Ets1-DNA complexes using Zero-Dipole Summation Method(The 50th Annual Meeting of the Biophysical Society of Japan)

Arakawa, Takamasa, Shiina, Masaaki, Ogata, Kazuhiro, Kamiya, Narutoshi, Fukuda, Ikuo, Nakamura, Haruki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

920

2SG-05 Mechanobiology of Cell Division and Chromosome Segregation(2SG Dynamics of chromatin as the physicochemical field for genetic activities,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Ishiwata, Shin'ichi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

921

3PT132 Molecular Dynamics Analysis of the Role of Protein-Water Interplay in the Opening Process of E-coli Mechanosensitive Channel MscL(The 50th Annual Meeting of the Biophysical Society of Japan)

Sawada, Yasuyuki, Sokabe, Masahiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

922

3PT150 Detailed Phase Diagram of Ditridecanoylphosphatidylcholine-Cholesterol System Determined by High-Sensitivity DSC(The 50th Annual Meeting of the Biophysical Society of Japan)

Kamitani, Yasushi, Okazaki, Fumihiro, Saruyama, Yasuo, Yao, Haruhiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 397 KB

english, 2012

923

2SH-03 Tracing dynamical behavior of a single cell by CARS microspectroscopy using a white-light laser source(2SH Star of life shined by frontier microscopies,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kano, Hideaki, Okuno, Masanari, Segawa, Hiroki, Hamaguchi, Hiro-o

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

924

3PT175 Effects of the crowding of mitochondria on their ATP production(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshimatsu, Daiki, Ohta, Yoshihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

925

3PT188 Identification and characterization of novel Vibrio cholerae transducers for amino acid chemotaxis(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawaguchi, Tetsuya, Yamamoto, Kimiko, Nishiyama, So-ichiro, Kawagishi, Ikuro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 408 KB

english, 2012

926

3PT234 Hydrogen-bonding interactions between BChl-a and Trp residues in the light-harvestingl complexes from Thermochro-matium tepidum(The 50th Annual Meeting of the Biophysical Society of Japan)

Li, Yong, Kimura, Yukihiro, Numata, Tomoko, Inada, Yuta, Arikawa, Teruhisa, Otomo, Seiu, Ohno, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 222 KB

english, 2012

927

10.2142/biophys.52.s198

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 122 KB

2012

928

1A1400 Prediction of fragile points and conservation of bending ability of coiled coil myosin(Molecular Motors I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Taniguchi, Mieko, Tanizawa, Hideki, Mitaku, Sigeki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

929

10.2142/biophys.52.s202

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 174 KB

2012

930

1B1400 Cavity : a Nature's strategy for functional sub states in proteins(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Akasaka, Kazuyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

931

1B1424 Solution NMR analysis of FUG C-terminal domain derived from Na^+-driven motor of Vibrio(Proteins: Structure & Function I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Gohara, Mizuki, Abe-Yoshizumi, Rei, Kobayashi, Shiori, Miyanoiri, Yohei, Hattori, Yoshikazu, Kojima, Chojiro, Kainosho, Masatsune, Homma, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

932

1F1558 Light activated states of photoreceptor membrane proteins as revealed by in-situ photo-irradiated solid-state NMR(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Naito, Akira, Tomonaga, Yuya, Hidaka, Tetsurou, Shibafuji, Yusuke, Makino, Yoshiteru, Kawamura, Izuru, Sudo, Yuki, Wada, Akimori, Okitsu, Takashi, Kamo, Naoki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

933

1H1424 Single molecule analysis of T cell activation with stimulatory lipid bilayers by live cell imaging(Bioimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ito, Yuma, Oyama, Hirofumi, Sakata-Sogawa, Kumiko, Tokunaga, Makio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

934

1I1510 Interaction of DNA molecules with nanopore studied by fluorescence microscopy(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ando, Genki, Yamada, Kazuteru, Mitsui, Toshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

935

2A1400 Observation of intracellular cytoskeleton and motor protein in the non-invasive cells with electron cryo-tomography(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Aramaki, Shinji, Aoyama, Kazuhiro, Mayanagi, Kota, Yasunaga, Takuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

936

2A1412 Detection of metallothionein-tagged LC2 on chlamydomonas axonemal ODA by electron cryo-tomography(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Jin, Mingyue, Yanagisawa, Haru-aki, Koyasako, Kotaro, Kamiya, Ritsu, Mayanagi, Kota, Yasunaga, Takuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

937

2A1546 The mechanism of the transition from diffusion to directed movement in mammalian cytoplasmic dynein(Molecular Motors II:Dynein,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Torisawa, Takayuki, Furuta, Ken'ya, Ichikawa, Muneyoshi, Toyoshima, Yoko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

938

2C1510 Analysis of the internal dynamics for pattern formation in multi cellular cyanobacteria by CA model(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Ishihara, Jun-ichi, Tachikawa, Masashi, Iwasaki, Hideo, Mochizuki, Atsushi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

939

2C1558 A Study on a Self-Destruction Process of a HIV-1 Quasispecies Population through the Error Catastrophe(Mathematical Biology,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

940

2E1448 Single mutation on a loop alters the key dynamics of the core, but not the average structure(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Maeno, Akihiro, P.N., Sunilkumar, Wada, Yuji, Ohmae, Eiji, Tate, Shin-ichi, Akasaka, Kazuyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

941

2E1546 Protein Aggregation Kinetics Using Short Amino acid Peptide Tags(Proteins:Property II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Khan, Monsur A., Islam, Mohammad M., Kuroda, Yutaka

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

942

2F1534 Substrate-Dependent Measurement Revealed Different Protein Conformations on Photoactivation and DNA Repair of E. coli CPD Photolyase(Photobiology:Vision & Photoreception II,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Wijaya, I Made Mahaputra, Zhang, Yu, Yamamoto, Junpei, Hitomi, Kenichi, Iwai, Shigenori, Getzoff, Elizabeth D., Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

943

1SD-01 Characterization of Protein-DNA complexes dynamics related to Chromatin structure regulation using Single-Molecule Techniques(1SD Molecular Dynamics in the Nucleus and Gene Regulation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Han, Yong-Woon, Harada, Yoshie

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

944

1SD-04 Quantitative analyses of chromosome dynamics in C. elegans early embryos(1SD Molecular Dynamics in the Nucleus and Gene Regulation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Sugawara, Takeshi, Arai, Ritsuko, Kimura, Akatsuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 392 KB

english, 2012

945

2G1546 The KcsA channel cytoplasmic domain effects on the inactivation gating(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Hirano, Minako, Onishi, Yukiko, Okuno, Daichi, Ide, Toru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

946

2H1436 Minimum requirements for the actin-like treadmilling motor system(Muscle,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Narita, Akihiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

947

2I1510 Purification and reconstitution of the plug-deleted Na^+-driven stator complex from Vibrio alginolyticus(Cell Biology II: Prokaryotes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Oba, Tetsuya, Kojima, Seiji, Homma, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

948

3A1058 Detection of steps of Mycoplasma mobile gliding ghost(Molecular Motors III:F1 ATPase and Mycoplasma,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kinosita, Yoshiaki, Nakane, Daisuke, Mizutani, Kana, Miyata, Makoto, Nishizaka, Takayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

949

3B1034 A Novel Method to simulate protein conformational change upon ligand binding(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tamura, Koichi, Hayashi, Shigehiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

950

3B1110 Intramolecular feedback regulation of cyanobacterial KaiC ATPase(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Mukaiyama, Atsushi, Onoue, Yasuhiro, Osako, Masato, Kondo, Takao, Akiyama, Shuji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

951

3C0900 Tandem-like fusion of two heterologous RNA-recognition motifs in TDP-43 enhances the specificity to its target nucleotide sequence(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Suzuki, Yo, Furukawa, Yoshiaki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 399 KB

english, 2012

952

3D0948 Possible non-photochemical quenching mechanism within pohotosystem II core complex(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Shibata, Yutaka, Nishi, Shunsuke, Kawakami, Keisuke, Shen, Jian-Ren, Renger, Thomas

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

953

3F1046 Thermal and Pressure induced structural and dynamics changes of bacteriorhodopsin as studied by solid-state NMR(Membrane Proteins,Oral Presentation)

Kawamura, Izuru, Horigome, Miyako, Nishikawa, Hirohide, Tajima, Kana, Okitsu, Takashi, Wada, Akimori, Tuzi, Satoru, Iwasa, Tatsuo, Naito, Akira

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

954

1PS006 Actin filament organization of smooth muscle and possible roles of myosin I and scaffolding protein visualized by fluorescent calmodulin(The 50th Annual Meeting of the Biophysical Society of Japan)

Okamoto, Yoh, Sunada, Kai, Tokuda, Syougo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 398 KB

english, 2012

955

1PS021 Crystallization of ATPsynthase(The 50th Annual Meeting of the Biophysical Society of Japan)

Shirakihara, Yasuo, Tanikawa, Hiromi, Murakami, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

956

1PS025 Conformational changes in the β subunits of F_1-ATPase revealed by FRET measurements during the rotation of the γ subunit(The 50th Annual Meeting of the Biophysical Society of Japan)

Sugawa, Mitsuhiro, Kobayashi, Masaru, Matsui, Takashi, Masaike, Tomoko, Nishizaka, Takayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

957

1SF-06 Towards understanding the locomotion of animals by limbless crawling(1SF Theoretical Approaches to Biological Motion and Deformation,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Kobayashi, Ryo, Kazama, Toshiya, Ito, Kentaro, Tanaka, Yoshimi, Nakagaki, Toshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

958

1PS034 Molecular Dynamics Simulation on Structural Characteristics of Yeast F1-ATPase before and after 16-degree Rotation of Gamma Subunit(The 50th Annual Meeting of the Biophysical Society of Japan)

Ito, Yuko, Yoshidome, Takashi, Matsubayashi, Nobuyuki, Kinoshita, Masahiro, Ikeguchi, Mitsunori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

959

1PT004 Mean Exit Time Analysis about Water Molecules around Membrane Surfaces(The 50th Annual Meeting of the Biophysical Society of Japan)

Yamamoto, Eiji, Akimoto, Takuma, Hirano, Yoshinori, Yasui, Masato, Yasuoka, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

960

1PT136 A Soft and Transparent Handleable Protein Model(The 50th Annual Meeting of the Biophysical Society of Japan)

Kawakami, Masaru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 395 KB

english, 2012

961

1PT144 Local and Global Structural Analysis of Denatured Protein by CW and pulsed ESR(The 50th Annual Meeting of the Biophysical Society of Japan)

Abe, Jun, Arai, Munehito, Takahashi, Satoshi, Yamauchi, Seigo, Ohba, Yasunori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

962

1PT168 Effect of flexibility and electrostatic interaction on rapid binding and unbinding of an intrinsically disordered protein(The 50th Annual Meeting of the Biophysical Society of Japan)

Umezawa, Koji, Nishimura, Kohei, Higo, Junichi, Nakamura, Haruki, Takano, Mitsunori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

963

1PT178 Folding of topologically complex proteins by an atomic interaction based coarse grained model(The 50th Annual Meeting of the Biophysical Society of Japan)

Li, Wenfei, Terakawa, Tsuyoshi, Wang, Wei, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 219 KB

english, 2012

964

10.2142/biophys.52._s8_

Journal:

Seibutsu Butsuri

Year:

2012

File:

PDF, 352 KB

2012

965

2PT153 Structural fluctuation and change around heme pockets of liganded Hb induced by L35 binding(The 50th Annual Meeting of the Biophysical Society of Japan)

Kanaori, Kenji, Tajiri, Yusuke, Tsuneshige, Antonio, Yonetani, Takashi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

966

2PT227 A theoretical study for three-dimensional path finding by amoeboid migration(The 50th Annual Meeting of the Biophysical Society of Japan)

Nishimura, Shin I.

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

967

2PT235 Analysis of lateral connectivity in networks based on a lattice theory(The 50th Annual Meeting of the Biophysical Society of Japan)

Tomaru, Takenori, Gunji, Yukio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

968

3PT002 Electron microscopy of oligomerization function of nuclear lamin A and the laminopathic mutants(The 50th Annual Meeting of the Biophysical Society of Japan)

Mio, Kazuhiro, Sugiki, Toshihiko, Mio, Muneyo, Matsuda, Chie, Hayashi, Yukiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 220 KB

english, 2012

969

3PT105 Controllable adsorption-desorption of double-stranded DNA onto single-walled carbon nanotube functionalized with polyethylene glycol(The 50th Annual Meeting of the Biophysical Society of Japan)

Nii, Daisuke, Hayashida, Takuya, Umemura, Kazuo

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

970

3PT122 Analysis of a regulatory mechanism of the proteolytic function of RseP by the PDZ domains in extracytoplasmic stress response(The 50th Annual Meeting of the Biophysical Society of Japan)

Hizukuri, Yohei, Akiyama, Yoshinori

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

971

3PT160 Calculation of the binding free energy of ATP to the nucleotide binding domain of an ABC transporter(The 50th Annual Meeting of the Biophysical Society of Japan)

Kaneta, Yusuke, Chiba, Shuntaro, Furuta, Tadaomi, Sakurai, Minoru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 212 KB

english, 2012

972

1C1522 Contribution of Trp273 in the a-repeat of the carbohydrate-binding module of endo-1,3-β-glucanase to laminarin binding(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tamashiro, Tomonari, Tanabe, Yoichi, Kanaori, Kenji, Ikura, Teikichi, Ito, Nobutoshi, Oda, Masayuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

973

1F1510 Pro206 of Anabaena sensory rhodopsin is responsible for the isomeric composition of retinal and photochromism(Photobiology: Vision & Photoreception I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kato, Yoshitaka, Kawanabe, Akira, Jung, Kwang-Hwan, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

974

1G1510 Mechanisms of signal transduction activated by heavy-ion microbeam induced bystander responses(Cell Biology I,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Tomita, Masanori, Matsumoto, Hideki, Funayama, Tomoo, Yokota, Yuichiro, Otsuka, Kensuke, Maeda, Munetoshi, Kobayashi, Yasuhiko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 403 KB

english, 2012

975

1H1610 From purified protein structures to in situ structures using EN(Bloimaging,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Miyazaki, Naoyuli, Iseki, Mineo, Hasegawa, Koji, Narita, Akihiro, Adachi, Shinichi, Watanabe, Masakatsu, Iwasaki, Kenji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

976

1I1424 Construction of IDEAL database for the investigation of intrinsically disordered proteins(Bioinformatics & Bioengineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Amemiya, Takayuki, Sakamoto, Shigetaka, Nobe, Yukiko, Murakami, Seiko D., Hosoda, Kazuo, Koike, Ryotaro, Hiroaki, Hidekazu, Ota, Motonori, Fukuchi, Satoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

977

1PS024 Inhibitory effect of Pi on F_1-ATPase P-loop mutant(The 50th Annual Meeting of the Biophysical Society of Japan)

Yoshida, Hikaru, Ito, Ayumi, Ito, Jotaro, Toyabe, Syoichi, Ueno, Hiroshi, Muneyuki, Eiro

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

978

1PS036 Single molecule FRET observation of the nucleotidedependent conformational changes of the kinesin motor domain(The 50th Annual Meeting of the Biophysical Society of Japan)

Komiyama, Ryosuke, Tomishige, Michio

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

979

1PT172 Stability and dynamics of satellite tobacco mosaic viruses studied by coarse-grained simulations(The 50th Annual Meeting of the Biophysical Society of Japan)

Ono, Koji, Hori, Naoto, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 206 KB

english, 2012

980

2PT142 Theoretical evaluation of structural stability of the active site of T1 lipase : cation-π vs. water-π interactions(The 50th Annual Meeting of the Biophysical Society of Japan)

Nakamura, Atsushi, Kang, Jiyoung, Tateno, Masaru

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 217 KB

english, 2012

981

2SG-06 Meiosis-specific non-coding RNA mediates robust pairing of homologous chromosomes in meiosis(2SG Dynamics of chromatin as the physicochemical field for genetic activities,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Hiraoka, Yasushi, Ding, Da-Qiao, Haraguchi, Tokuko

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 207 KB

english, 2012

982

1C1448 Protein engineering for site-specific bioconjugation chemistry : Construction of multiple functional low-molecular antibodies(Proteins: Measurement, Analysis, Engineering,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Umetsu, Mitsuo, Ueda, Asami, Nakanishi, Takeshi, Hashikami, Kentaro, Asano, Ryutaro, Kumagai, Izumi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 221 KB

english, 2012

983

3D0924 Structural changes of hydrogen-bonding environment upon the photoreaction of the BLUF domains(Photobiology:Photosynthesis,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Iwata, Tatsuya, Ito, Shota, Iseki, Mineo, Watanabe, Masakatsu, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 216 KB

english, 2012

984

1PS037 The effect of the internal tension between two heads on the nucleotide binding site of kinesin-1 studied by All-atom MD(The 50th Annual Meeting of the Biophysical Society of Japan)

Kanada, Ryo, Makino, Tsukasa, Tomishige, Michio, Takada, Shoji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

985

3E0900 Structural basis for nuclear import regulated by molecular rearrangements in the nuclear pore complex(Proteins:Structure,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Kobayashi, Junya, Matsuura, Yoshiyuki

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012