Volume 4; Issue 2

Standards in Genomic Sciences

Volume 4; Issue 2

1

The IGS Standard Operating Procedure for Automated Prokaryotic Annotation

Galens, Kevin, Orvis, Joshua, Daugherty, Sean, Creasy, Heather H., Angiuoli, Sam, White, Owen, Wortman, Jennifer, Mahurkar, Anup, Giglio, Michelle Gwinn

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 588 KB

english, 2011

2

Genome Sequence ofCampylobacter jejunistrain 327, a strain isolated from a turkey slaughterhouse

Takamiya, Monica, Ozen, Asli, Rasmussen, Morten, Alter, Thomas, Gilbert, Tom, Ussery, Dave W., Knøchel, Susanne

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 1.45 MB

english, 2011

3

Complete genome sequence ofHydrogenobacter thermophilustype strain (TK-6T)

Zeytun, Ahmet, Sikorski, Johannes, Nolan, Matt, Lapidus, Alla, Lucas, Susan, Han, James, Tice, Hope, Cheng, Jan-Fang, Tapia, Roxanne, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Ivanova, Nata

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 3.23 MB

english, 2011

4

Complete genome sequence ofMarivirga tractuosatype strain (H-43T)

Pagani, Ioanna, Chertkov, Olga, Lapidus, Alla, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Copeland, Alex, Cheng, Jan-Fang, Nolan, Matt, Saunders, Elizabeth, Pitluck, Sam, Held, Brittany, Goodw

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 2.96 MB

english, 2011

5

Complete genome sequence ofDesulfurococcus mucosustype strain (O7/1T)

Wirth, Reinhard, Chertkov, Olga, Held, Brittany, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, L

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 2.69 MB

english, 2011

6

Permanent draft genome sequence ofVibrio tubiashiistrain NCIMB 1337 (ATCC19106)

Temperton, Ben, Thomas, Simon, Tait, Karen, Parry, Helen, Emery, Matt, Allen, Mike, Quinn, John, MacGrath, John, Gilbert, Jack

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 369 KB

english, 2011

7

A proposal to sequence the genome of a garter snake (Thamnophis sirtalis)

Castoe, Todd A., Bronikowski, Anne M., Brodie, Edmund D., Edwards, Scott V., Pfrender, Michael E., Shapiro, Michael D., Pollock, David D., Warren, Wesley C.

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 4.54 MB

english, 2011

8

A Call for Papers for the second special issue of SIGS from the Genomic Standards Consortium

Field, Dawn, Sterk, Peter, Kottmann, Renzo

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 126 KB

english, 2011

9

Meeting report of the RNA Ontology Consortium January 8–9, 2011

Birmingham, Amanda, Clemente, Jose C., Desai, Narayan, Gilbert, Jack, Gonzalez, Antonio, Kyrpides, Nikos, Meyer, Folker, Nawrocki, Eric, Sterk, Peter, Stombaugh, Jesse, Weinberg, Zasha, Wendel, Doug,

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 153 KB

english, 2011

10

Complete genome sequence ofCellulophaga lyticatype strain (LIM-21T)

Pati, Amrita, Abt, Birte, Teshima, Hazuki, Nolan, Matt, Lapidus, Alla, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 1.44 MB

english, 2011

11

Non-contiguous finished genome sequence ofBacteroides coprosuistype strain (PC139T)

Land, Miriam, Held, Brittany, Gronow, Sabine, Abt, Birte, Lucas, Susan, Del Rio, Tijana Glavina, Nolan, Matt, Tice, Hope, Cheng, Jan-Fang, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova,

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 3.06 MB

english, 2011

12

Complete genome sequence ofArthrobacter phenanthrenivoranstype strain (Sphe3)

Kallimanis, Aristeidis, LaButti, Kurt M., Lapidus, Alla, Clum, Alicia, Lykidis, Athanasios, Mavromatis, Kostantinos, Pagani, Ioanna, Liolios, Konstantinos, Ivanova, Natalia, Goodwin, Lynne, Pitluck, S

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 7.36 MB

english, 2011

13

Complete genome sequence ofBacteroides salanitronistype strain (BL78T)

Gronow, Sabine, Held, Brittany, Lucas, Susan, Lapidus, Alla, Del Rio, Tijana Glavina, Nolan, Matt, Tice, Hope, Deshpande, Shweta, Cheng, Jan-Fang, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna,

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 4.19 MB

english, 2011

14

Complete genome sequence ofOdoribacter splanchnicustype strain (1651/6T)

Göker, Markus, Gronow, Sabine, Zeytun, Ahmet, Nolan, Matt, Lucas, Susan, Lapidus, Alla, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova,

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 1.59 MB

english, 2011

15

Complete genome sequence ofOceanithermus profundustype strain (506T)

Pati, Amrita, Zhang, Xiaojing, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstan

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 1.02 MB

english, 2011

16

Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard

Duhaime, Melissa Beth, Kottmann, Renzo, Field, Dawn, Glöckner, Frank Oliver

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 3.74 MB

english, 2011

17

Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets

Morrison, Norman, Hancock, David, Hirschman, Lynette, Dawyndt, Peter, Verslyppe, Bert, Kyrpides, Nikos, Kottmann, Renzo, Yilmaz, Pelin, Glöckner, Frank Oliver, Grethe, Jeff, Booth, Tim, Sterk, Peter,

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 386 KB

english, 2011

18

Complete genome sequence ofRiemerella anatipestifertype strain (ATCC 11845T)

Mavromatis, Konstantinos, Lu, Megan, Misra, Monica, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 2.15 MB

english, 2011

19

Complete genome sequence ofDeinococcus maricopensistype strain (LB-34T)

Rüdiger Pukall,Ahmet Zeytun,Susan Lucas,Alla Lapidus…

Journal:

Standards in Genomic Sciences

Year:

2011

Language:

english

File:

PDF, 4.09 MB

english, 2011