Volume 6; Issue 3

The Annals of Applied Statistics

Volume 6; Issue 3

1

A model for sequential evolution of ligands by exponential enrichment (SELEX) data

Atherton, Juli, Boley, Nathan, Brown, Ben, Ogawa, Nobuo, Davidson, Stuart M., Eisen, Michael B., Biggin, Mark D., Bickel, Peter

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 301 KB

english, 2012

2

TREE MODELS FOR DIFFERENCE AND CHANGE DETECTION IN A COMPLEX ENVIRONMENT

Yong Wang, Ilze Ziedins, Mark Holmes and Neil Challands

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.15 MB

english, 2012

3

MATCHING MARKERS AND UNLABELED CONFIGURATIONS IN PROTEIN GELS

Kanti V. Mardia, Emma M. Petty and Charles C. Taylor

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.42 MB

english, 2012

4

FUNCTIONAL DYNAMIC FACTOR MODELS WITH APPLICATION TO YIELD CURVE FORECASTING

Spencer Hays, Haipeng Shen and Jianhua Z. Huang

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.03 MB

english, 2012

5

FIBRE-GENERATED POINT PROCESSES AND FIELDS OF ORIENTATIONS

Bryony J. Hill, Wilfrid S. Kendall and Elke Thönnes

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.54 MB

english, 2012

6

INTEGRATIVE MODEL-BASED CLUSTERING OF MICROARRAY METHYLATION AND EXPRESSION DATA

Matthias Kormaksson, James G. Booth, Maria E. Figueroa and Ari Melnick

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.89 MB

english, 2012

7

A TWO-WAY REGULARIZATION METHOD FOR MEG SOURCE RECONSTRUCTION

Tian Siva Tian, Jianhua Z. Huang, Haipeng Shen and Zhimin Li

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.69 MB

english, 2012

8

ORDER SELECTION IN NONLINEAR TIME SERIES MODELS WITH APPLICATION TO THE STUDY OF CELL MEMORY

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.84 MB

english, 2012

9

TREE-GUIDED GROUP LASSO FOR MULTI-RESPONSE REGRESSION WITH STRUCTURED SPARSITY, WITH AN APPLICATION TO EQTL MAPPING

Seyoung Kim and Eric P. Xing

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.09 MB

english, 2012

10

BOOTSTRAPPING DATA ARRAYS OF ARBITRARY ORDER

Art B. Owen and Dean Eckles

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.99 MB

english, 2012

11

SEMIPARAMETRIC REGRESSION IN TESTICULAR GERM CELL DATA

Anastasia Voulgaraki, Benjamin Kedem and Barry I. Graubard

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.92 MB

english, 2012

12

CLASSIFICATION IN POSTURAL STYLE

Antoine Chambaz and Christophe Denis

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.45 MB

english, 2012

13

STATISTICAL METHODS FOR TISSUE ARRAY IMAGES—ALGORITHMIC SCORING AND CO-TRAINING

Donghui Yan, Pei Wang, Michael Linden, Beatrice Knudsen and Timothy Randolph

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.56 MB

english, 2012

14

SEMIPARAMETRIC ZERO-INFLATED MODELING IN MULTI-ETHNIC STUDY OF ATHEROSCLEROSIS (MESA)

Hai Liu, Shuangge Ma, Richard Kronmal and Kung-Sik Chan

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.85 MB

english, 2012

15

GENE-CENTRIC GENE–GENE INTERACTION: A MODEL-BASED KERNEL MACHINE METHOD

Shaoyu Li and Yuehua Cui

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.37 MB

english, 2012

16

PEOPLE BORN IN THE MIDDLE EAST BUT RESIDING IN THE NETHERLANDS: INVARIANT POPULATION SIZE ESTIMATES AND THE ROLE OF ACTIVE AND PASSIVE COVARIATES

Peter G. M. van der Heijden, Joe Whittaker, Maarten Cruyff, Bart Bakker and Rik van der Vliet

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.87 MB

english, 2012

17

NETWORK INFERENCE AND BIOLOGICAL DYNAMICS

Chris. J. Oates and Sach Mukherjee

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.74 MB

english, 2012

18

DETECTING MUTATIONS IN MIXED SAMPLE SEQUENCING DATA USING EMPIRICAL BAYES

Omkar Muralidharan, Georges Natsoulis, John Bell, Hanlee Ji and Nancy R. Zhang

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.10 MB

english, 2012

19

INFERENCE AND CHARACTERIZATION OF MULTI-ATTRIBUTE NETWORKS WITH APPLICATION TO COMPUTATIONAL BIOLOGY

Natallia Katenka and Eric D. Kolaczyk

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.51 MB

english, 2012

20

THE IMPORTANCE OF DISTINCT MODELING STRATEGIES FOR GENE AND GENE-SPECIFIC TREATMENT EFFECTS IN HIERARCHICAL MODELS FOR MICROARRAY DATA

Steven P. Lund and Dan Nettleton

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.43 MB

english, 2012

21

CORRELATION ANALYSIS OF ENZYMATIC REACTION OF A SINGLE PROTEIN MOLECULE

Chao Du and S. C. Kou

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 2.06 MB

english, 2012

22

THE SCREENING AND RANKING ALGORITHM TO DETECT DNA COPY NUMBER VARIATIONS

Yue S. Niu and Heping Zhang

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.88 MB

english, 2012

23

A MODEL FOR SEQUENTIAL EVOLUTION OF LIGANDS BY EXPONENTIAL ENRICHMENT (SELEX) DATA

Juli Atherton, Nathan Boley, Ben Brown, Nobuo Ogawa, Stuart M. Davidson, Michael B. Eisen, Mark D. Biggin and Peter Bickel

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.96 MB

english, 2012

24

Detecting mutations in mixed sample sequencing data using empirical Bayes

Muralidharan, Omkar, Natsoulis, Georges, Bell, John, Ji, Hanlee, Zhang, Nancy R.

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 382 KB

english, 2012

25

The importance of distinct modeling strategies for gene and gene-specific treatment effects in hierarchical models for microarray data

Lund, Steven P., Nettleton, Dan

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

26

Matching markers and unlabeled configurations in protein gels

Mardia, Kanti V., Petty, Emma M., Taylor, Charles C.

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 290 KB

english, 2012

27

Classification in postural style

Chambaz, Antoine, Denis, Christophe

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 243 KB

english, 2012

28

Statistical methods for tissue array images—algorithmic scoring and co-training

Yan, Donghui, Wang, Pei, Linden, Michael, Knudsen, Beatrice, Randolph, Timothy

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 3.37 MB

english, 2012

29

Semiparametric regression in testicular germ cell data

Voulgaraki, Anastasia, Kedem, Benjamin, Graubard, Barry I.

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 541 KB

english, 2012

30

Fibre-generated point processes and fields of orientations

Hill, Bryony J., Kendall, Wilfrid S., Thönnes, Elke

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 1.08 MB

english, 2012

31

Correlation analysis of enzymatic reaction of a single protein molecule

Du, Chao, Kou, S. C.

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 405 KB

english, 2012

32

Bootstrapping data arrays of arbitrary order

Owen, Art B., Eckles, Dean

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 311 KB

english, 2012

33

Tree models for difference and change detection in a complex environment

Wang, Yong, Ziedins, Ilze, Holmes, Mark, Challands, Neil

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 376 KB

english, 2012

34

A two-way regularization method for MEG source reconstruction

Tian, Tian Siva, Huang, Jianhua Z., Shen, Haipeng, Li, Zhimin

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 4.28 MB

english, 2012

35

Order selection in nonlinear time series models with application to the study of cell memory

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 468 KB

english, 2012

36

The screening and ranking algorithm to detect DNA copy number variations

Niu, Yue S., Zhang, Heping

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 371 KB

english, 2012

37

Integrative Model-based clustering of microarray methylation and expression data

Kormaksson, Matthias, Booth, James G., Figueroa, Maria E., Melnick, Ari

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 991 KB

english, 2012

38

Functional dynamic factor models with application to yield curve forecasting

Hays, Spencer, Shen, Haipeng, Huang, Jianhua Z.

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 423 KB

english, 2012

39

Inference and characterization of multi-attribute networks with application to computational biology

Katenka, Natallia, Kolaczyk, Eric D.

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 396 KB

english, 2012

40

Semiparametric zero-inflated modeling in multi-ethnic study of atherosclerosis (MESA)

Liu, Hai, Ma, Shuangge, Kronmal, Richard, Chan, Kung-Sik

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 359 KB

english, 2012

41

Gene-centric gene–gene interaction: A model-based kernel machine method

Li, Shaoyu, Cui, Yuehua

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 619 KB

english, 2012

42

People born in the Middle East but residing in the Netherlands: Invariant population size estimates and the role of active and passive covariates

van der Heijden, Peter G. M., Whittaker, Joe, Cruyff, Maarten, Bakker, Bart, van der Vliet, Rik

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 199 KB

english, 2012

43

Network inference and biological dynamics

Oates, Chris. J., Mukherjee, Sach

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 527 KB

english, 2012

44

Tree-guided group lasso for multi-response regression with structured sparsity, with an application to eQTL mapping

Kim, Seyoung, Xing, Eric P.

Journal:

The Annals of Applied Statistics

Year:

2012

Language:

english

File:

PDF, 497 KB

english, 2012