Volume 8; Issue 7

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The ISME Journal
Volume 8; Issue 7

The ISME Journal

Volume 8; Issue 7

1

Links between plant and fungal communities across a deforestation chronosequence in the Amazon rainforest

Mueller, Rebecca C, Paula, Fabiana S, Mirza, Babur S, Rodrigues, Jorge LM, Nüsslein, Klaus, Bohannan, Brendan JM

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 220 KB

english, 2014

2

‘Geoarchaeote NAG1’ is a deeply rooting lineage of the archaeal order Thermoproteales rather than a new phylum

Guy, Lionel, Spang, Anja, Saw, Jimmy H, Ettema, Thijs J G

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 2.44 MB

english, 2014

3

Crenarchaeal heterotrophy in salt marsh sediments

Seyler, Lauren M, McGuinness, Lora M, Kerkhof, Lee J

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.49 MB

english, 2014

4

Lateral transfer of eukaryotic ribosomal RNA genes: an emerging concern for molecular ecology of microbial eukaryotes

Yabuki, Akinori, Toyofuku, Takashi, Takishita, Kiyotaka

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.07 MB

english, 2014

5

Wastewater as a point source of antibiotic-resistance genes in the sediment of a freshwater lake

Czekalski, Nadine, Gascón Díez, Elena, Bürgmann, Helmut

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.72 MB

english, 2014

6

Genomic analysis of Chthonomonas calidirosea, the first sequenced isolate of the phylum Armatimonadetes

Lee, Kevin C-Y, Morgan, Xochitl C, Dunfield, Peter F, Tamas, Ivica, McDonald, Ian R, Stott, Matthew B

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.58 MB

english, 2014

7

Metabolic interdependencies between phylogenetically novel fermenters and respiratory organisms in an unconfined aquifer

Wrighton, Kelly C, Castelle, Cindy J, Wilkins, Michael J, Hug, Laura A, Sharon, Itai, Thomas, Brian C, Handley, Kim M, Mullin, Sean W, Nicora, Carrie D, Singh, Andrea, Lipton, Mary S, Long, Philip E,

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 844 KB

english, 2014

8

Evolutionary analysis of a streamlined lineage of surface ocean Roseobacters

Luo, Haiwei, Swan, Brandon K, Stepanauskas, Ramunas, Hughes, Austin L, Moran, Mary Ann

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 661 KB

english, 2014

9

A microarray for assessing transcription from pelagic marine microbial taxa

Shilova, Irina N, Robidart, Julie C, James Tripp, H, Turk-Kubo, Kendra, Wawrik, Boris, Post, Anton F, Thompson, Anne W, Ward, Bess, Hollibaugh, James T, Millard, Andy, Ostrowski, Martin, J Scanlan, Da

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 3.21 MB

english, 2014

10

The quest for a unified view of bacterial land colonization

Wu, Hao, Fang, Yongjun, Yu, Jun, Zhang, Zhang

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.97 MB

english, 2014

11

Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill

Mason, Olivia U, Scott, Nicole M, Gonzalez, Antonio, Robbins-Pianka, Adam, Bælum, Jacob, Kimbrel, Jeffrey, Bouskill, Nicholas J, Prestat, Emmanuel, Borglin, Sharon, Joyner, Dominique C, Fortney, Julia

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.23 MB

english, 2014

12

Classification and quantification of bacteriophage taxa in human gut metagenomes

Waller, Alison S, Yamada, Takuji, Kristensen, David M, Kultima, Jens Roat, Sunagawa, Shinichi, Koonin, Eugene V, Bork, Peer

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.20 MB

english, 2014

13

Deep-sea hydrothermal vent Epsilonproteobacteria encode a conserved and widespread nitrate reduction pathway (Nap)

Vetriani, Costantino, Voordeckers, James W, Crespo-Medina, Melitza, O'Brien, Charles E, Giovannelli, Donato, Lutz, Richard A

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 2.33 MB

english, 2014

14

Gut microbiome composition and function in experimental colitis during active disease and treatment-induced remission

Rooks, Michelle G, Veiga, Patrick, Wardwell-Scott, Leslie H, Tickle, Timothy, Segata, Nicola, Michaud, Monia, Gallini, Carey Ann, Beal, Chloé, van Hylckama-Vlieg, Johan ET, Ballal, Sonia A, Morgan, Xo

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 2.15 MB

english, 2014

15

Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype

Cameron Thrash, J, Temperton, Ben, Swan, Brandon K, Landry, Zachary C, Woyke, Tanja, DeLong, Edward F, Stepanauskas, Ramunas, Giovannoni, Stephan J

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.21 MB

english, 2014

16

Microorganisms persist at record depths in the subseafloor of the Canterbury Basin

Ciobanu, Maria-Cristina, Burgaud, Gaëtan, Dufresne, Alexis, Breuker, Anja, Rédou, Vanessa, Ben Maamar, Sarah, Gaboyer, Frédéric, Vandenabeele-Trambouze, Odile, Lipp, Julius Sebastian, Schippers, Axel,

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 3.20 MB

english, 2014

17

Functional characterization of polysaccharide utilization loci in the marine Bacteroidetes ‘Gramella forsetii’ KT0803

Kabisch, Antje, Otto, Andreas, König, Sten, Becher, Dörte, Albrecht, Dirk, Schüler, Margarete, Teeling, Hanno, Amann, Rudolf I, Schweder, Thomas

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.23 MB

english, 2014

18

Direct exchange of vitamin B12 is demonstrated by modelling the growth dynamics of algal–bacterial cocultures

Grant, Matthew AA, Kazamia, Elena, Cicuta, Pietro, Smith, Alison G

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 805 KB

english, 2014

19

High virus-to-cell ratios indicate ongoing production of viruses in deep subsurface sediments

Engelhardt, Tim, Kallmeyer, Jens, Cypionka, Heribert, Engelen, Bert

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 1.26 MB

english, 2014

20

Classification and quantification of bacteriophage taxa in human gut metagenomes

Waller, Alison S, Yamada, Takuji, Kristensen, David M, Kultima, Jens Roat, Sunagawa, Shinichi, Koonin, Eugene V, Bork, Peer

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 162 KB

english, 2014

21

Links between plant and fungal communities across a deforestation chronosequence in the Amazon rainforest

Mueller, Rebecca C, Paula, Fabiana S, Mirza, Babur S, Rodrigues, Jorge L M, Nüsslein, Klaus, Bohannan, Brendan J M

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 162 KB

english, 2014

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