Volume 24; Issue 10

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The Plant Cell
Volume 24; Issue 10

The Plant Cell

Volume 24; Issue 10

1

Agrobacterium May Delay Plant Nonhomologous End-Joining DNA Repair via XRCC4 to Favor T-DNA Integration

Vaghchhipawala, Z. E., Vasudevan, B., Lee, S., Morsy, M. R., Mysore, K. S.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.59 MB

english, 2012

2

Spatio-Temporal Cellular Dynamics of the Arabidopsis Flagellin Receptor Reveal Activation Status-Dependent Endosomal Sorting

Beck, M., Zhou, J., Faulkner, C., MacLean, D., Robatzek, S.

Journal:

Year:

2012

Language:

english

File:

PDF, 9.45 MB

english, 2012

3

Spatiotemporal Asymmetry of the Meiotic Program Underlies the Predominantly Distal Distribution of Meiotic Crossovers in Barley

Higgins, J. D., Perry, R. M., Barakate, A., Ramsay, L., Waugh, R., Halpin, C., Armstrong, S. J., Franklin, F. C. H.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.28 MB

english, 2012

4

Nondisjunction in Favor of a Chromosome: The Mechanism of Rye B Chromosome Drive during Pollen Mitosis

Banaei-Moghaddam, A. M., Schubert, V., Kumke, K., Weiss, O., Klemme, S., Nagaki, K., Macas, J., Gonzalez-Sanchez, M., Heredia, V., Gomez-Revilla, D., Gonzalez-Garcia, M., Vega, J. M., Puertas, M. J.,

Journal:

Year:

2012

Language:

english

File:

PDF, 989 KB

english, 2012

5

Systems Analysis of Shoot Apical Meristem Growth and Development: Integrating Hormonal and Mechanical Signaling

Murray, J. A. H., Jones, A., Godin, C., Traas, J.

Journal:

Year:

2012

Language:

english

File:

PDF, 603 KB

english, 2012

6

Multiscale Systems Analysis of Root Growth and Development: Modeling Beyond the Network and Cellular Scales

Band, L. R., Fozard, J. A., Godin, C., Jensen, O. E., Pridmore, T., Bennett, M. J., King, J. R.

Journal:

Year:

2012

Language:

english

File:

PDF, 989 KB

english, 2012

7

Modeling Regulatory Networks to Understand Plant Development: Small Is Beautiful

Middleton, A. M., Farcot, E., Owen, M. R., Vernoux, T.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.33 MB

english, 2012

8

Systems Analysis of Plant Functional, Transcriptional, Physical Interaction, and Metabolic Networks

Bassel, G. W., Gaudinier, A., Brady, S. M., Hennig, L., Rhee, S. Y., De Smet, I.

Journal:

Year:

2012

Language:

english

File:

PDF, 742 KB

english, 2012

9

Arabidopsis Chloroplast RNA Binding Proteins CP31A and CP29A Associate with Large Transcript Pools and Confer Cold Stress Tolerance by Influencing Multiple Chloroplast RNA Processing Steps

Kupsch, C., Ruwe, H., Gusewski, S., Tillich, M., Small, I., Schmitz-Linneweber, C.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.32 MB

english, 2012

10

Conserved Noncoding Sequences Highlight Shared Components of Regulatory Networks in Dicotyledonous Plants

Baxter, L., Jironkin, A., Hickman, R., Moore, J., Barrington, C., Krusche, P., Dyer, N. P., Buchanan-Wollaston, V., Tiskin, A., Beynon, J., Denby, K., Ott, S.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.23 MB

english, 2012

11

A Really Useful Pathogen, Agrobacterium tumefaciens

Journal:

Year:

2012

File:

PDF, 42 KB

2012

12

Constitutively Active Mitogen-Activated Protein Kinase Versions Reveal Functions of Arabidopsis MPK4 in Pathogen Defense Signaling

Berriri, S., Garcia, A. V., dit Frey, N. F., Rozhon, W., Pateyron, S., Leonhardt, N., Montillet, J.-L., Leung, J., Hirt, H., Colcombet, J.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.19 MB

english, 2012

13

The Arabidopsis Mediator Complex Subunit16 Positively Regulates Salicylate-Mediated Systemic Acquired Resistance and Jasmonate/Ethylene-Induced Defense Pathways

Zhang, X., Wang, C., Zhang, Y., Sun, Y., Mou, Z.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.23 MB

english, 2012

14

Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family

Yang, S.-Y., Gronlund, M., Jakobsen, I., Grotemeyer, M. S., Rentsch, D., Miyao, A., Hirochika, H., Kumar, C. S., Sundaresan, V., Salamin, N., Catausan, S., Mattes, N., Heuer, S., Paszkowski, U.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.57 MB

english, 2012

15

Non-Recognition-of-BTH4, an Arabidopsis Mediator Subunit Homolog, Is Necessary for Development and Response to Salicylic Acid

Canet, J. V., Dobon, A., Tornero, P.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.51 MB

english, 2012

16

Mutation of Arabidopsis SPLICEOSOMAL TIMEKEEPER LOCUS1 Causes Circadian Clock Defects

Jones, M. A., Williams, B. A., McNicol, J., Simpson, C. G., Brown, J. W. S., Harmer, S. L.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.65 MB

english, 2012

17

Fruit Growth in Arabidopsis Occurs via DELLA-Dependent and DELLA-Independent Gibberellin Responses

Fuentes, S., Ljung, K., Sorefan, K., Alvey, E., Harberd, N. P., Ostergaard, L.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.24 MB

english, 2012

18

Structural Basis of Efficient Electron Transport between Photosynthetic Membrane Proteins and Plastocyanin in Spinach Revealed Using Nuclear Magnetic Resonance

Ueda, T., Nomoto, N., Koga, M., Ogasa, H., Ogawa, Y., Matsumoto, M., Stampoulis, P., Sode, K., Terasawa, H., Shimada, I.

Journal:

Year:

2012

Language:

english

File:

PDF, 1011 KB

english, 2012

19

Circadian Rhythms Require Proper RNA Splicing

Journal:

Year:

2012

Language:

english

File:

PDF, 106 KB

english, 2012

20

The Arabidopsis Thylakoid ADP/ATP Carrier TAAC Has an Additional Role in Supplying Plastidic Phosphoadenosine 5'-Phosphosulfate to the Cytosol

Gigolashvili, T., Geier, M., Ashykhmina, N., Frerigmann, H., Wulfert, S., Krueger, S., Mugford, S. G., Kopriva, S., Haferkamp, I., Flugge, U.-I.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.40 MB

english, 2012

21

Bidirectional Secretions from Glandular Trichomes of Pyrethrum Enable Immunization of Seedlings

Ramirez, A. M., Stoopen, G., Menzel, T. R., Gols, R., Bouwmeester, H. J., Dicke, M., Jongsma, M. A.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.18 MB

english, 2012

22

BASIC PENTACYSTEINE Proteins Mediate MADS Domain Complex Binding to the DNA for Tissue-Specific Expression of Target Genes in Arabidopsis

Simonini, S., Roig-Villanova, I., Gregis, V., Colombo, B., Colombo, L., Kater, M. M.

Journal:

Year:

2012

Language:

english

File:

PDF, 968 KB

english, 2012

23

Spatiotemporal Regulation of Lateral Root Organogenesis in Arabidopsis by Cytokinin

Bielach, A., Podlesakova, K., Marhavy, P., Duclercq, J., Cuesta, C., Muller, B., Grunewald, W., Tarkowski, P., Benkova, E.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.19 MB

english, 2012

24

Pumping Iron: Conserved Iron Deficiency Responses in the Plant Lineage

Journal:

Year:

2012

Language:

english

File:

PDF, 78 KB

english, 2012

25

Arabidopsis MICROTUBULE DESTABILIZING PROTEIN40 Is Involved in Brassinosteroid Regulation of Hypocotyl Elongation

Wang, X., Zhang, J., Yuan, M., Ehrhardt, D. W., Wang, Z., Mao, T.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.76 MB

english, 2012

26

In Silico Plant Biology Comes of Age

Eckardt, N. A., Bennett, M.

Journal:

Year:

2012

Language:

english

File:

PDF, 336 KB

english, 2012

27

The Armadillo Repeat Gene ZAK IXIK Promotes Arabidopsis Early Embryo and Endosperm Development through a Distinctive Gametophytic Maternal Effect

Ngo, Q. A., Baroux, C., Guthorl, D., Mozerov, P., Collinge, M. A., Sundaresan, V., Grossniklaus, U.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.91 MB

english, 2012

28

Characterization of a NADH-Dependent Glutamate Dehydrogenase Mutant of Arabidopsis Demonstrates the Key Role of this Enzyme in Root Carbon and Nitrogen Metabolism

Fontaine, J.-X., Terce-Laforgue, T., Armengaud, P., Clement, G., Renou, J.-P., Pelletier, S., Catterou, M., Azzopardi, M., Gibon, Y., Lea, P. J., Hirel, B., Dubois, F.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.57 MB

english, 2012

29

Systems and Trans-System Level Analysis Identifies Conserved Iron Deficiency Responses in the Plant Lineage

Urzica, E. I., Casero, D., Yamasaki, H., Hsieh, S. I., Adler, L. N., Karpowicz, S. J., Blaby-Haas, C. E., Clarke, S. G., Loo, J. A., Pellegrini, M., Merchant, S. S.

Journal:

Year:

2012

Language:

english

File:

PDF, 2.12 MB

english, 2012

30

The Spectrum and Frequency of Self-Inflicted and Host Gene Mutations Produced by the Transposon Ac in Maize

Huang, J. T., Dooner, H. K.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.52 MB

english, 2012

31

Modeling Regulatory Networks to Understand Plant Development: Small Is Beautiful

Alistair M. Middleton, Etienne Farcot, Markus R. Owen and Teva Vernoux

Journal:

Year:

2012

Language:

english

File:

PDF, 3.19 MB

english, 2012

32

BASIC PENTACYSTEINE Proteins Mediate MADS Domain Complex Binding to the DNA for Tissue-Specific Expression of Target Genes in Arabidopsis

Sara Simonini, Irma Roig-Villanova, Veronica Gregis, Bilitis Colombo, Lucia Colombo and Martin M. Kater

Journal:

Year:

2012

Language:

english

File:

PDF, 2.06 MB

english, 2012

33

In Silico Plant Biology Comes of Age

Nancy A. Eckardt and Malcolm Bennett

Journal:

Year:

2012

Language:

english

File:

PDF, 538 KB

english, 2012

34

Spatiotemporal Regulation of Lateral Root Organogenesis in Arabidopsis by Cytokinin

Agnieszka Bielach, Kateřina Podlešáková, Peter Marhavý, Jérôme Duclercq, Candela Cuesta, Bruno Müller, Wim Grunewald, Petr Tarkowski and Eva Benková

Journal:

Year:

2012

Language:

english

File:

PDF, 3.12 MB

english, 2012

35

Conserved Noncoding Sequences Highlight Shared Components of Regulatory Networks in Dicotyledonous Plants

Laura Baxter, Aleksey Jironkin, Richard Hickman, Jay Moore, Christopher Barrington, Peter Krusche, Nigel P. Dyer, Vicky Buchanan-Wollaston, Alexander Tiskin, Jim Beynon, Katherine Denby and Sascha Ott

Journal:

Year:

2012

Language:

english

File:

PDF, 3.16 MB

english, 2012

36

Spatio-Temporal Cellular Dynamics of the Arabidopsis Flagellin Receptor Reveal Activation Status-Dependent Endosomal Sorting

Martina Beck, Ji Zhou, Christine Faulkner, Daniel MacLean and Silke Robatzek

Journal:

Year:

2012

Language:

english

File:

PDF, 3.16 MB

english, 2012

37

The DUF59 Family Gene AE7 Acts in the Cytosolic Iron-Sulfur Cluster Assembly Pathway to Maintain Nuclear Genome Integrity in Arabidopsis

Dexian Luo, Delphine G. Bernard, Janneke Balk, Huang Hai and Xiaofeng Cui

Journal:

Year:

2012

Language:

english

File:

PDF, 3.01 MB

english, 2012

38

RETINOBLASTOMA RELATED1 Regulates Asymmetric Cell Divisions in Arabidopsis

Annika K. Weimer, Moritz K. Nowack, Daniel Bouyer, Xin'Ai Zhao, Hirofumi Harashima, Sadaf Naseer, Freya De Winter, Nico Dissmeyer, Niko Geldner and Arp Schnittger

Journal:

Year:

2012

Language:

english

File:

PDF, 2.80 MB

english, 2012

39

Arabidopsis MICROTUBULE DESTABILIZING PROTEIN40 Is Involved in Brassinosteroid Regulation of Hypocotyl Elongation

Xianling Wang, Jin Zhang, Ming Yuan, David W. Ehrhardt, Zhiyong Wang and Tonglin Mao

Journal:

Year:

2012

Language:

english

File:

PDF, 3.17 MB

english, 2012

40

RETINOBLASTOMA RELATED1 Regulates Asymmetric Cell Divisions in Arabidopsis

Weimer, A. K., Nowack, M. K., Bouyer, D., Zhao, X., Harashima, H., Naseer, S., De Winter, F., Dissmeyer, N., Geldner, N., Schnittger, A.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.39 MB

english, 2012

41

Arabidopsis bZIP16 Transcription Factor Integrates Light and Hormone Signaling Pathways to Regulate Early Seedling Development

Hsieh, W.-P., Hsieh, H.-L., Wu, S.-H.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.43 MB

english, 2012

42

The Armadillo Repeat Gene ZAK IXIK Promotes Arabidopsis Early Embryo and Endosperm Development through a Distinctive Gametophytic Maternal Effect

Quy A. Ngo, Celia Baroux, Daniela Guthörl, Peter Mozerov, Margaret A. Collinge, Venkatesan Sundaresan and Ueli Grossniklaus

Journal:

Year:

2012

Language:

english

File:

PDF, 3.84 MB

english, 2012

43

Spatiotemporal Asymmetry of the Meiotic Program Underlies the Predominantly Distal Distribution of Meiotic Crossovers in Barley

James D. Higgins, Ruth M. Perry, Abdellah Barakate, Luke Ramsay, Robbie Waugh, Claire Halpin, Susan J. Armstrong and F. Chris H. Franklin

Journal:

Year:

2012

Language:

english

File:

PDF, 2.71 MB

english, 2012

44

Agrobacterium May Delay Plant Nonhomologous End-Joining DNA Repair via XRCC4 to Favor T-DNA Integration

Zarir E. Vaghchhipawala, Balaji Vasudevan, Seonghee Lee, Mustafa R. Morsy and Kirankumar S. Mysore

Journal:

Year:

2012

Language:

english

File:

PDF, 3.13 MB

english, 2012

45

Nondisjunction in Favor of a Chromosome: The Mechanism of Rye B Chromosome Drive during Pollen Mitosis

Ali M. Banaei-Moghaddam, Veit Schubert, Katrin Kumke, Oda Weiß, Sonja Klemme, Kiyotaka Nagaki, Jiří Macas, Mónica González-Sánchez, Victoria Heredia, Diana Gómez-Revilla, Miriam González-García, Juan

Journal:

Year:

2012

Language:

english

File:

PDF, 2.17 MB

english, 2012

46

Systems Analysis of Plant Functional, Transcriptional, Physical Interaction, and Metabolic Networks

George W. Bassel, Allison Gaudinier, Siobhan M. Brady, Lars Hennig, Seung Y. Rhee and Ive De Smet

Journal:

Year:

2012

Language:

english

File:

PDF, 2.88 MB

english, 2012

47

Non-Recognition-of-BTH4, an Arabidopsis Mediator Subunit Homolog, Is Necessary for Development and Response to Salicylic Acid

Juan Vicente Canet, Albor Dobón and Pablo Tornero

Journal:

Year:

2012

Language:

english

File:

PDF, 3.54 MB

english, 2012

48

The Arabidopsis Thylakoid ADP/ATP Carrier TAAC Has an Additional Role in Supplying Plastidic Phosphoadenosine 5′-Phosphosulfate to the Cytosol

Tamara Gigolashvili, Melanie Geier, Natallia Ashykhmina, Henning Frerigmann, Sabine Wulfert, Stephan Krueger, Sarah G. Mugford, Stanislav Kopriva, Ilka Haferkamp and Ulf-Ingo Flügge

Journal:

Year:

2012

Language:

english

File:

PDF, 3.51 MB

english, 2012

49

The DUF59 Family Gene AE7 Acts in the Cytosolic Iron-Sulfur Cluster Assembly Pathway to Maintain Nuclear Genome Integrity in Arabidopsis

Luo, D., Bernard, D. G., Balk, J., Hai, H., Cui, X.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.70 MB

english, 2012

50

Characterization of a NADH-Dependent Glutamate Dehydrogenase Mutant of Arabidopsis Demonstrates the Key Role of this Enzyme in Root Carbon and Nitrogen Metabolism

Jean-Xavier Fontaine, Thérèse Tercé-Laforgue, Patrick Armengaud, Gilles Clément, Jean-Pierre Renou, Sandra Pelletier, Manuella Catterou, Marianne Azzopardi, Yves Gibon, Peter J. Lea, Bertrand Hirel an

Journal:

Year:

2012

Language:

english

File:

PDF, 3.97 MB

english, 2012

51

Bidirectional Secretions from Glandular Trichomes of Pyrethrum Enable Immunization of Seedlings

Aldana M. Ramirez, Geert Stoopen, Tila R. Menzel, Rieta Gols, Harro J. Bouwmeester, Marcel Dicke and Maarten A. Jongsma

Journal:

Year:

2012

Language:

english

File:

PDF, 2.92 MB

english, 2012

52

Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of the PHOSPHATE TRANSPORTER1 Gene Family

Shu-Yi Yang, Mette Grønlund, Iver Jakobsen, Marianne Suter Grotemeyer, Doris Rentsch, Akio Miyao, Hirohiko Hirochika, Chellian Santhosh Kumar, Venkatesan Sundaresan, Nicolas Salamin, Sheryl Catausan,

Journal:

Year:

2012

Language:

english

File:

PDF, 3.55 MB

english, 2012

53

Arabidopsis bZIP16 Transcription Factor Integrates Light and Hormone Signaling Pathways to Regulate Early Seedling Development

Wen-Ping Hsieh, Hsu-Liang Hsieh and Shu-Hsing Wu

Journal:

Year:

2012

Language:

english

File:

PDF, 3.01 MB

english, 2012

54

Arabidopsis Chloroplast RNA Binding Proteins CP31A and CP29A Associate with Large Transcript Pools and Confer Cold Stress Tolerance by Influencing Multiple Chloroplast RNA Processing Steps

Christiane Kupsch, Hannes Ruwe, Sandra Gusewski, Michael Tillich, Ian Small and Christian Schmitz-Linneweber

Journal:

Year:

2012

Language:

english

File:

PDF, 3.21 MB

english, 2012

55

Structural Basis of Efficient Electron Transport between Photosynthetic Membrane Proteins and Plastocyanin in Spinach Revealed Using Nuclear Magnetic Resonance

Takumi Ueda, Naoko Nomoto, Masamichi Koga, Hiroki Ogasa, Yuuta Ogawa, Masahiko Matsumoto, Pavlos Stampoulis, Koji Sode, Hiroaki Terasawa and Ichio Shimada

Journal:

Year:

2012

Language:

english

File:

PDF, 2.61 MB

english, 2012

56

The Spectrum and Frequency of Self-Inflicted and Host Gene Mutations Produced by the Transposon Ac in Maize

Jun T. Huang and Hugo K. Dooner

Journal:

Year:

2012

Language:

english

File:

PDF, 2.96 MB

english, 2012

57

Constitutively Active Mitogen-Activated Protein Kinase Versions Reveal Functions of Arabidopsis MPK4 in Pathogen Defense Signaling

Souha Berriri, Ana Victoria Garcia, Nicolas Frei dit Frey, Wilfried Rozhon, Stéphanie Pateyron, Nathalie Leonhardt, Jean-Luc Montillet, Jeffrey Leung, Heribert Hirt and Jean Colcombet

Journal:

Year:

2012

Language:

english

File:

PDF, 2.77 MB

english, 2012

58

The Arabidopsis Mediator Complex Subunit16 Positively Regulates Salicylate-Mediated Systemic Acquired Resistance and Jasmonate/Ethylene-Induced Defense Pathways

Xudong Zhang, Chenggang Wang, Yanping Zhang, Yijun Sun and Zhonglin Mou

Journal:

Year:

2012

Language:

english

File:

PDF, 3.41 MB

english, 2012

59

Fruit Growth in Arabidopsis Occurs via DELLA-Dependent and DELLA-Independent Gibberellin Responses

Sara Fuentes, Karin Ljung, Karim Sorefan, Elizabeth Alvey, Nicholas P. Harberd and Lars Østergaard

Journal:

Year:

2012

Language:

english

File:

PDF, 3.16 MB

english, 2012

60

Pumping Iron: Conserved Iron Deficiency Responses in the Plant Lineage

Nancy A. Eckardt

Journal:

Year:

2012

Language:

english

File:

PDF, 322 KB

english, 2012

61

Multiscale Systems Analysis of Root Growth and Development: Modeling Beyond the Network and Cellular Scales

Leah R. Band, John A. Fozard, Christophe Godin, Oliver E. Jensen, Tony Pridmore, Malcolm J. Bennett and John R. King

Journal:

Year:

2012

Language:

english

File:

PDF, 3.02 MB

english, 2012

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