Volume 12; Issue 3

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Tree Genetics & Genomes
Volume 12; Issue 3

Tree Genetics & Genomes

Volume 12; Issue 3

1

Development of SNP-based assays for disease resistance and fruit quality traits in apple (Malus×domestica Borkh.) and validation in breeding pilot studies

Baumgartner, Isabelle O., Kellerhals, Markus, Costa, Fabrizio, Dondini, Luca, Pagliarani, Giulia, Gregori, Roberto, Tartarini, Stefano, Leumann, Lucie, Laurens, François, Patocchi, Andrea

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.06 MB

english, 2016

2

Mapping QTLs associated with fruit quality traits in peach [Prunus persica(L.) Batsch] using SNP maps

Zeballos, José Luis, Abidi, Walid, Giménez, Rosa, Monforte, Antonio J., Moreno, María Ángeles, Gogorcena, Yolanda

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.75 MB

english, 2016

3

Genetic variation for needle traits in Scots pine (Pinus sylvestrisL.)

Donnelly, Kevin, Cavers, Stephen, Cottrell, Joan E., Ennos, Richard A.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.25 MB

english, 2016

4

Population genetic diversity of the rare hardwood butternut (Juglans cinerea) in the northeastern USA

Boraks, A., Broders, K. D.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

5

Genetic analysis of salt tolerance in a progeny derived from the citrus rootstocks Cleopatra mandarin and trifoliate orange

Raga, V., Intrigliolo, D. S., Bernet, G. P., Carbonell, E. A., Asins, M. J.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.30 MB

english, 2016

6

Transcriptomic profile of leaf tissue from the leguminous tree,Millettia pinnata

Wegrzyn, Jill L., Whalen, Jeanne, Kinlaw, Claire S., Harry, David E., Puryear, Jeffrey, Loopstra, Carol A., Gonzalez-Ibeas, Daniel, Vasquez-Gross, Hans A., Famula, Randi A., Neale, David B.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.40 MB

english, 2016

7

Evidence for different QTL underlying the immune and hypersensitive responses ofEucalyptus globulusto the rust pathogenPuccinia psidii

Butler, J. B., Freeman, J. S., Vaillancourt, R. E., Potts, B. M., Glen, M., Lee, D. J., Pegg, G. S.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.16 MB

english, 2016

8

Auxin- and cytokinin-induced berries set in grapevine partly rely on enhanced gibberellin biosynthesis

Lu, Long, Liang, Jinjun, Zhu, Xiang, Xiao, Kun, Li, Tianzhong, Hu, Jianfang

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.74 MB

english, 2016

9

Genetic pool structure of local apple cultivars from Portugal assessed by microsatellites

Ferreira, V., Ramos-Cabrer, A. M., Carnide, V., Pinto-Carnide, O., Assunção, A., Marreiros, A., Rodrigues, R., Pereira-Lorenzo, S., Castro, I.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.84 MB

english, 2016

10

Structural genomics and transcriptional characterization of the Dormancy-Associated MADS-box genes during bud dormancy progression in apple

Porto, Diogo Denardi, da Silveira Falavigna, Vítor, Arenhart, Rafael Augusto, Perini, Pâmela, Buffon, Vanessa, Anzanello, Rafael, dos Santos, Henrique Pessoa, Fialho, Flávio Bello, de Oliveira, Paulo

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.97 MB

english, 2016

11

Additive and non-additive genetic parameters for multipurpose traits in a clonally replicated incomplete factorial test ofCastaneaspp.

Míguez-Soto, B., López-Villamor, A., Fernández-López, J.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

12

Characterization and utilization of microsatellites in theCoffea canephoragenome to assess genetic association between wild species in Kenya and cultivated coffee

Ogutu, Collins, Fang, Ting, Yan, Lin, Wang, Lu, Huang, Lifang, Wang, Xiaoyang, Ma, Baiquan, Deng, Xianbao, Owiti, Albert, Nyende, Aggrey, Han, Yuepeng

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.39 MB

english, 2016

13

Development of microsatellite markers and their use in genetic diversity and population structure analysis inCasuarina

Kullan, A. R. K., Kulkarni, A. V., Kumar, R. Suresh, Rajkumar, R.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.52 MB

english, 2016

14

Transcriptome sequencing identified wax-related genes controlling the glossy phenotype formation of “Ganqi 3,” a bud mutant derived from wild-type “Newhall” navel orange

Liu, Dechun, Yang, Li, Wang, Yuechen, Zhuang, Xia, Liu, Chuanfu, Liu, Shanbei, Liu, Yong

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 2.35 MB

english, 2016

15

Selection and testing of reference genes for accurate RT-qPCR in adult needles and seedlings of maritime pine

Granados, José M., Ávila, Concepción, Cánovas, Francisco M., Cañas, Rafael A.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.81 MB

english, 2016

16

High-throughput 18K SNP array to assess genetic variability of the main grapevine cultivars from Sicily

Mercati, Francesco, De Lorenzis, Gabriella, Brancadoro, Lucio, Lupini, Antonio, Abenavoli, Maria Rosa, Barbagallo, Maria Gabriella, Di Lorenzo, Rosario, Scienza, Attilio, Sunseri, Francesco

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.73 MB

english, 2016

17

Identifying candidate genes for wood formation in poplar based on microarray network analysis and graph theory

Zhang, Huanping, Yin, Tongming

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.48 MB

english, 2016

18

The key role of “Moscato bianco” and “Malvasia aromatica di Parma” in the parentage of traditional aromatic grape varieties

Ruffa, Paola, Raimondi, Stefano, Boccacci, Paolo, Abbà, Simona, Schneider, Anna

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.04 MB

english, 2016

19

Disentangling the effects of isolation-by-distance and isolation-by-environment on genetic differentiation amongRhododendronlineages in the subgenusTsutsusi

Huang, Chun-Lin, Chen, Jui-Hung, Chang, Chung-Te, Chung, Jeng-Der, Liao, Pei-Chun, Wang, Jenn-Che, Hwang, Shih-Ying

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 2.85 MB

english, 2016

20

Patterns of neutral and adaptive genetic diversity across the natural range of sugar pine (Pinus lambertianaDougl.)

Vangestel, Carl, Vázquez-Lobo, Alejandra, Martínez-García, Pedro J., Calic, Irina, Wegrzyn, Jill L., Neale, David B.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.43 MB

english, 2016

21

Provenance and progeny performances and genotype × environment interactions ofEucalyptus robustagrown in Madagascar

Razafimahatratra, Andriambelo Radonirina, Ramananantoandro, Tahiana, Razafimaharo, Vololoniriana, Chaix, Gilles

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

22

A differential distribution of auxin and flavonols in radiata pine stem seedlings exposed to inclination

Ramos, Patricio, Guajardo, Joselin, Moya-León, María Alejandra, Herrera, Raúl

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.78 MB

english, 2016

23

Phylogenetic relationships among cultivatedZanthoxylumspecies in China based on cpDNA markers

Feng, Shijing, Liu, Zhenshan, Chen, Lv, Hou, Na, Yang, Tuxi, Wei, Anzhi

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.27 MB

english, 2016

24

Hybridization in contact zone between temperate European pine species

Wachowiak, Witold, Żukowska, Weronika B., Wójkiewicz, Błażej, Cavers, Stephen, Litkowiec, Monika

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.35 MB

english, 2016

25

SSR-based genetic mapping and QTL analysis for timing of spring bud flush, young shoot color, and mature leaf size in tea plant (Camellia sinensis)

Tan, Li-Qiang, Wang, Li-Yuan, Xu, Li-Yi, Wu, Li-Yun, Peng, Min, Zhang, Cheng-Cai, Wei, Kang, Bai, Pei-Xian, Li, Hai-Lin, Cheng, Hao, Qi, Gui-Nian

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 1.65 MB

english, 2016

26

Genome-wide association mapping of sexual incompatibility genes in cacao (Theobroma cacaoL.)

da Silva, Marcos Ramos, Clément, Didier, Gramacho, Karina Peres, Monteiro, Wilson Reis, Argout, Xavier, Lanaud, Claire, Lopes, Uilson

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 774 KB

english, 2016

27

Genetic analyses reveal high levels of seed and pollen flow in hawthorn (Crataegus monogynaJacq.), a key component of hedgerows

Brown, James A., Beatty, Gemma E., Finlay, Caroline M. V., Montgomery, W. Ian, Tosh, David G., Provan, Jim

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 592 KB

english, 2016

28

Fine mapping of the rosy apple aphid resistance locusDp-flon linkage group 8 of the apple cultivar ‘Florina’

Pagliarani, G., Dapena, E., Miñarro, M., Denancé, C., Lespinasse, Y., Rat-Morris, E., Troggio, M., Durel, C. E., Tartarini, S.

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 807 KB

english, 2016

29

A high-density linkage map with 2560 markers and its application for the localization of the male-sterile genesms3andms4inCryptomeria japonicaD. Don

Moriguchi, Yoshinari, Uchiyama, Kentaro, Ueno, Saneyoshi, Ujino-Ihara, Tokuko, Matsumoto, Asako, Iwai, Junji, Miyajima, Daisuke, Saito, Maki, Sato, Masaya, Tsumura, Yoshihiko

Journal:

Tree Genetics & Genomes

Year:

2016

Language:

english

File:

PDF, 705 KB

english, 2016