Volume 14

Genomics Data

Volume 14

1

Genome-wide miRNA, gene and methylation analysis of triple negative breast cancer to identify changes associated with lymph node metastases

Avery-Kiejda, Kelly A., Mathe, Andrea, Scott, Rodney J.

Journal:

Year:

2017

Language:

english

File:

PDF, 281 KB

english, 2017

2

Whole genome sequencing of Microbacterium sp. AISO3 from polluted San Jacinto River sediment reveals high bacterial mobility, metabolic versatility and heavy metal resistance

Iyer, Rupa, Damania, Ashish, Iken, Brian

Journal:

Year:

2017

Language:

english

File:

PDF, 419 KB

english, 2017

3

Whole genome of Klebsiella aerogenes PX01 isolated from San Jacinto River sediment west of Baytown, Texas reveals the presence of multiple antibiotic resistance determinants and mobile genetic elements

Iyer, Rupa, Iken, Brian, Damania, Ashish

Journal:

Year:

2017

Language:

english

File:

PDF, 308 KB

english, 2017

4

Comparative metagenomics reveals alterations in the soil bacterial community driven by N-fertilizer and Amino 16® application in lettuce

Kalivas, Apostolos, Ganopoulos, Ioannis, Psomopoulos, Fotis, Grigoriadis, Ioannis, Xanthopoulou, Aliki, Hatzigiannakis, Evangelos, Osathanunkul, Maslin, Tsaftaris, Athanasios, Madesis, Panagiotis

Journal:

Year:

2017

Language:

english

File:

PDF, 651 KB

english, 2017

5

Genome of Pseudomonas nitroreducens DF05 from dioxin contaminated sediment downstream of the San Jacinto River waste pits reveals a broad array of aromatic degradation gene determinants

Iyer, Rupa, Iken, Brian, Damania, Ashish

Journal:

Year:

2017

Language:

english

File:

PDF, 332 KB

english, 2017

6

Genome-wide identification and tissue-specific expression analysis of nucleotide binding site-leucine rich repeat gene family in Cicer arietinum (kabuli chickpea)

Sharma, Ranu, Rawat, Vimal, Suresh, C.G.

Journal:

Year:

2017

Language:

english

File:

PDF, 838 KB

english, 2017

7

RNA-seq data comparisons of wild soybean genotypes in response to soybean cyst nematode ( Heterodera glycines )

Zhang, Hengyou, Song, Bao-Hua

Journal:

Year:

2017

Language:

english

File:

PDF, 277 KB

english, 2017

8

Gene expression profiling of ramie roots during hydroponic induction and adaption to aquatic environment

Gao, Gang, Xiong, Heping, Chen, Kunmei, Chen, Jikang, Chen, Ping, Yu, Chunming, Zhu, Aiguo

Journal:

Year:

2017

Language:

english

File:

PDF, 361 KB

english, 2017

9

Rhizospheric metagenome of the terrestrial mangrove fern Acrostichum from Indian Sunderbans

Ganguli, Sayak, Rahaman, Sabdar, Bera, Abhishek R., Vishal, Vineet, Malik, Shelvia, Roopalakshmi, K., Singh, Pankaj K.

Journal:

Year:

2017

Language:

english

File:

PDF, 298 KB

english, 2017

10

Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12

Gaskell, Jill, Kersten, Phil, Larrondo, Luis F., Canessa, Paulo, Martinez, Diego, Hibbett, David, Schmoll, Monika, Kubicek, Christian P., Martinez, Angel T., Yadav, Jagjit, Master, Emma, Magnuson, Jon

Journal:

Year:

2017

Language:

english

File:

PDF, 166 KB

english, 2017

11

Draft genome sequence of an endophytic bacterium, Paenibacillus tyrfis strain SUK123, isolated from Santiria apiculata stem

Haruna, Emmanuel, Zin, Noraziah M., Adams, Jonathan M.

Journal:

Year:

2017

Language:

english

File:

PDF, 280 KB

english, 2017

12

A new version of the grapevine reference genome assembly (12X.v2) and of its annotation (VCost.v3)

Canaguier, A., Grimplet, J., Di Gaspero, G., Scalabrin, S., Duchêne, E., Choisne, N., Mohellibi, N., Guichard, C., Rombauts, S., Le Clainche, I., Bérard, A., Chauveau, A., Bounon, R., Rustenholz, C.,

Journal:

Year:

2017

Language:

english

File:

PDF, 699 KB

english, 2017

13

Stroke-associated pattern of gene expression previously identified by machine-learning is diagnostically robust in an independent patient population

O'Connell, Grant C., Chantler, Paul D., Barr, Taura L.

Journal:

Year:

2017

Language:

english

File:

PDF, 899 KB

english, 2017

14

Computational deciphering of biotic stress associated genes in tomato ( Solanum lycopersicum )

Tandon, G., Singh, S., Kaur, S., Sarika,, Iquebal, M.A., Rai, A., Kumar, D.

Journal:

Year:

2017

Language:

english

File:

PDF, 934 KB

english, 2017

15

Whole genome shotgun sequencing of Indian strains of Streptococcus agalactiae

Veeraraghavan, Balaji, Devanga Ragupathi, Naveen Kumar, Santhanam, Sridhar, Verghese, Valsan Philip, Inbanathan, Francis Yesurajan, Livingston, Charles

Journal:

Year:

2017

Language:

english

File:

PDF, 271 KB

english, 2017

16

Small RNAome sequencing delineates the small RNA landscape of pluripotent adult stem cells in the planarian Schmidtea mediterranea

Li, Yue, Zeng, An, Han, Xiao-Shuan, Li, Ge, Li, Yong-Qin, Shen, Bairong, Jing, Qing

Journal:

Year:

2017

Language:

english

File:

PDF, 1.51 MB

english, 2017

17

Transcriptome analysis of the Chinese giant salamander ( Andrias davidianus ) using RNA-sequencing

Huang, Yong, Xiong, Jian Li, Gao, Xiao Chan, Sun, Xi Hong

Journal:

Year:

2017

Language:

english

File:

PDF, 680 KB

english, 2017

18

Co-expression network analysis identified six hub genes in association with progression and prognosis in human clear cell renal cell carcinoma (ccRCC)

Yuan, Lushun, Chen, Liang, Qian, Kaiyu, Qian, Guofeng, Wu, Chin-Lee, Wang, Xinghuan, Xiao, Yu

Journal:

Year:

2017

Language:

english

File:

PDF, 1.31 MB

english, 2017

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