Volume 3

Genomics Data

Volume 3

1

Transcriptional profiling of MEF2-regulated genes in human neural progenitor cells derived from embryonic stem cells

Chan, Shing Fai, Huang, Xiayu, McKercher, Scott R., Zaidi, Rameez, Okamoto, Shu-ichi, Nakanishi, Nobuki, Lipton, Stuart A.

Journal:

Year:

2015

Language:

english

File:

PDF, 572 KB

english, 2015

2

Whole transcriptome RNA sequencing data from blood leukocytes derived from Parkinson's disease patients prior to and following deep brain stimulation treatment

Soreq, Lilach, Salomonis, Nathan, Guffanti, Alessandro, Bergman, Hagai, Israel, Zvi, Soreq, Hermona

Journal:

Year:

2015

Language:

english

File:

PDF, 627 KB

english, 2015

3

Microarray analysis of Arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (AuNPs)

Shukla, Devesh, Krishnamurthy, Sneha, Sahi, Shivendra V.

Journal:

Year:

2015

Language:

english

File:

PDF, 655 KB

english, 2015

4

Locus-specific DNA methylation analysis of retrotransposons in ES, somatic and cancer cells using High-Throughput Targeted Repeat Element Bisulfite Sequencing

Bakshi, Arundhati, Ekram, Muhammad B., Kim, Joomyeong

Journal:

Year:

2015

Language:

english

File:

PDF, 874 KB

english, 2015

5

Impact of the DNA polymerase Theta on the DNA replication program

Baldacci, Giuseppe, Hoffmann, Jean-Sebastien, Cadoret, Jean-Charles

Journal:

Year:

2015

Language:

english

File:

PDF, 593 KB

english, 2015

6

Discovery of gene regulation pattern in lung cancer by gene expression profiling using human tissues

Fu, Junjie, Khaybullin, Ravil, Liang, Xiao, Morin, Madeleine, Xia, Amy, Yeh, Anderson, Qi, Xin

Journal:

Year:

2015

Language:

english

File:

PDF, 695 KB

english, 2015

7

Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines

Kulkarni, Kirti K., Bankar, Kiran Gopinath, Shukla, Rohit Nandan, Das, Chandrima, Banerjee, Amrita, Dasgupta, Dipak, Vasudevan, Madavan

Journal:

Year:

2015

Language:

english

File:

PDF, 1.84 MB

english, 2015

8

Multipotent human stromal cells isolated from cord blood, term placenta and adult bone marrow show distinct differences in gene expression pattern

Matigian, Nicholas, Brooke, Gary, Zaibak, Faten, Rossetti, Tony, Kollar, Katarina, Pelekanos, Rebecca, Heazlewood, Celena, Mackay-Sim, Alan, Wells, Christine A., Atkinson, Kerry

Journal:

Year:

2015

Language:

english

File:

PDF, 1.02 MB

english, 2015

9

Draft genome sequence of Phomopsis longicolla isolate MSPL 10-6

Li, Shuxian, Darwish, Omar, Alkharouf, Nadim, Matthews, Benjamin, Ji, Pingsheng, Domier, Leslie L., Zhang, Ning, Bluhm, Burton H.

Journal:

Year:

2015

Language:

english

File:

PDF, 205 KB

english, 2015

10

Transcriptome analysis of response to drought in poplar interspecific hybrids

Barghini, Elena, Cossu, Rosa Maria, Cavallini, Andrea, Giordani, Tommaso

Journal:

Year:

2015

Language:

english

File:

PDF, 535 KB

english, 2015

11

Kuwaiti population subgroup of nomadic Bedouin ancestry—Whole genome sequence and analysis

John, Sumi Elsa, Thareja, Gaurav, Hebbar, Prashantha, Behbehani, Kazem, Thanaraj, Thangavel Alphonse, Alsmadi, Osama

Journal:

Year:

2015

Language:

english

File:

PDF, 1.45 MB

english, 2015

12

Digital gene-expression of alfalfa saponin extract on laying hens

Fan, Wenna, Du, Hongqi, Zhou, Lu, Shi, Pengfei, Wang, Chengzhang

Journal:

Year:

2015

Language:

english

File:

PDF, 297 KB

english, 2015

13

Genome-wide nucleosome occupancy and DNA methylation profiling of four human cell lines

Statham, Aaron L., Taberlay, Phillippa C., Kelly, Theresa K., Jones, Peter A., Clark, Susan J.

Journal:

Year:

2015

Language:

english

File:

PDF, 261 KB

english, 2015

14

Transcriptome profiling of male gametophyte development in Nicotiana tabacum

Bokvaj, Pavel, Hafidh, Said, Honys, David

Journal:

Year:

2015

Language:

english

File:

PDF, 1.71 MB

english, 2015

15

Identification and profiling of conserved and novel microRNAs in Laodelphax striatellus in response to rice black-streaked dwarf virus (RBSDV) infection

Li, Jun-Min, Zhou, Yan-Ru, Sun, Zong-Tao, Wang, Xu, Xie, Li, Chen, Jian-Ping

Journal:

Year:

2015

Language:

english

File:

PDF, 937 KB

english, 2015

16

miRNA expression profiling of formalin-fixed paraffin-embedded (FFPE) hereditary breast tumors

Tanić, Miljana, Yanowski, Kira, Andrés, Eduardo, Gómez-López, Gonzalo, Socorro, María Rodríguez-Pinilla, Pisano, David G., Martinez-Delgado, Beatriz, Benítez, Javier

Journal:

Year:

2015

Language:

english

File:

PDF, 575 KB

english, 2015

17

Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India

Patel, Rajesh, Mevada, Vishal, Prajapati, Dhaval, Dudhagara, Pravin, Koringa, Prakash, Joshi, C.G.

Journal:

Year:

2015

Language:

english

File:

PDF, 796 KB

english, 2015

18

Genomic analysis to define molecular basis of aggressiveness in a mouse model of oral cancer

Chalivendra, Varun, Kanchi, Krishna Latha, Onken, Michael D., Winkler, Ashley E., Mardis, Elaine, Uppaluri, Ravindra

Journal:

Year:

2015

Language:

english

File:

PDF, 158 KB

english, 2015

19

Genome-wide redistribution of BRD4 binding sites in transformation resistant cells

Si, Han, Scaffidi, Paola, Merchant, Anand, Cam, Maggie, Stahlberg, Eric, Misteli, Tom, Fernandez, Patricia

Journal:

Year:

2015

Language:

english

File:

PDF, 267 KB

english, 2015

20

Small molecule inhibition of FOXM1: How to bring a novel compound into genomic context

Marsico, Giovanni, Gormally, Michael V.

Journal:

Year:

2015

Language:

english

File:

PDF, 595 KB

english, 2015

21

Motif content comparison between monocot and dicot species

Cserhati, Matyas

Journal:

Year:

2015

Language:

english

File:

PDF, 677 KB

english, 2015

22

High-throughput whole-genome sequencing of E14 mouse embryonic stem cells

Incarnato, Danny, Neri, Francesco

Journal:

Year:

2015

Language:

english

File:

PDF, 154 KB

english, 2015

23

The role of protein kinase-C theta in control of epithelial to mesenchymal transition and cancer stem cell formation

Zafar, Anjum, Hardy, Kristine, Wu, Fan, Li, Jasmine, Rao, Sudha

Journal:

Year:

2015

Language:

english

File:

PDF, 892 KB

english, 2015

24

An integrated functional genomic analysis identifies the antitumorigenic mechanism of action for PPARγ in lung cancer cells

Kollipara, Rahul K., Kittler, Ralf

Journal:

Year:

2015

Language:

english

File:

PDF, 1.06 MB

english, 2015

25

Comparison of genomic DNA methylation pattern among septic and non-septic newborns — An epigenome wide association study

Dhas, D. Benet Bosco, Ashmi, A. Hiasindh, Bhat, B. Vishnu, Kalaivani, S., Parija, Subash Chandra

Journal:

Year:

2015

Language:

english

File:

PDF, 1.08 MB

english, 2015

26

Comparison of inter- and intraspecies variation in humans and fruit flies

Shih, Juliann, Hodge, Russ, Andrade-Navarro, Miguel A.

Journal:

Year:

2015

Language:

english

File:

PDF, 695 KB

english, 2015

27

Whole blood gene expression profiling of neonates with confirmed bacterial sepsis

Dickinson, Paul, Smith, Claire L., Forster, Thorsten, Craigon, Marie, Ross, Alan J., Khondoker, Mizan R., Ivens, Alasdair, Lynn, David J., Orme, Judith, Jackson, Allan, Lacaze, Paul, Flanagan, Katie L

Journal:

Year:

2015

Language:

english

File:

PDF, 1.27 MB

english, 2015

28

Expression-profiling of apoptosis induced by ablation of the long ncRNA TRPM2-AS in prostate cancer cell

Lavorgna, Giovanni, Chiacchiera, Fulvio, Briganti, Alberto, Montorsi, Francesco, Pasini, Diego, Salonia, Andrea

Journal:

Year:

2015

Language:

english

File:

PDF, 247 KB

english, 2015

29

Genome wide mapping of UBF binding-sites in mouse and human cell lines

Diesch, Jeannine, Hannan, Ross D., Sanij, Elaine

Journal:

Year:

2015

Language:

english

File:

PDF, 183 KB

english, 2015

30

Stimulation of the Drosophila immune system alters genome-wide nucleosome occupancy

Ren, Yingxue, Vera, Daniel L., Hughes, Kimberly A., Dennis, Jonathan H.

Journal:

Year:

2015

Language:

english

File:

PDF, 360 KB

english, 2015

31

The high-throughput sequencing of small RNAs profiling in wide hybridisation and allopolyploidisation between Brassica rapa and Brassica nigra

Ghani, Muhammad Awais, Li, Junxing, Rao, Linli, Raza, Muhammad Ammar, Cao, Liwen, Yu, Ningning, Zou, Xiaoxia, Chen, Liping

Journal:

Year:

2015

Language:

english

File:

PDF, 576 KB

english, 2015

32

Transcriptomic profiling of trichloroethylene exposure in male mouse liver

Jiang, Yan, Chen, Jiahong, Tong, Jian, Chen, Tao

Journal:

Year:

2015

Language:

english

File:

PDF, 544 KB

english, 2015

33

Two-color Dye-swap DNA Microarray approach toward confident gene expression profiling in PMCAO mouse model for ischemia-related and PACAP38-influenced genes

Hori, Motohide, Shibato, Junko, Nakamachi, Tomoya, Rakwal, Randeep, Ogawa, Tetsuo, Shioda, Seiji, Numazawa, Satoshi

Journal:

Year:

2015

Language:

english

File:

PDF, 4.04 MB

english, 2015

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