Volume 23; Issue 20

Main
Bioinformatics
Volume 23; Issue 20

Bioinformatics

Volume 23; Issue 20

1

Tools for visually exploring biological networks

Suderman, M., Hallett, M.

Journal:

Year:

2007

Language:

english

File:

PDF, 209 KB

english, 2007

2

Mining biological networks for unknown pathways

Cakmak, A., Ozsoyoglu, G.

Journal:

Year:

2007

Language:

english

File:

PDF, 326 KB

english, 2007

3

Effect of the mutation rate and background size on the quality of pathogen identification

Reed, C., Fofanov, V., Putonti, C., Chumakov, S., Slezak, T., Fofanov, Y.

Journal:

Year:

2007

Language:

english

File:

PDF, 447 KB

english, 2007

4

TMpro web server and web service: transmembrane helix prediction through amino acid property analysis

Ganapathiraju, M., Jursa, C. J., Karimi, H. A., Klein-Seetharaman, J.

Journal:

Year:

2007

Language:

english

File:

PDF, 202 KB

english, 2007

5

MSQT for choosing SNP assays from multiple DNA alignments

Warthmann, N., Fitz, J., Weigel, D.

Journal:

Year:

2007

Language:

english

File:

PDF, 156 KB

english, 2007

6

A comparison of background correction methods for two-colour microarrays

Ritchie, M. E., Silver, J., Oshlack, A., Holmes, M., Diyagama, D., Holloway, A., Smyth, G. K.

Journal:

Year:

2007

Language:

english

File:

PDF, 870 KB

english, 2007

7

An error model for protein quantification

Kreutz, C., Rodriguez, M.M. B., Maiwald, T., Seidl, M., Blum, H.E., Mohr, L., Timmer, J.

Journal:

Year:

2007

Language:

english

File:

PDF, 170 KB

english, 2007

8

Identification of potential HIV-1 targets of minocycline

Jenwitheesuk, E., Samudrala, R.

Journal:

Year:

2007

Language:

english

File:

PDF, 268 KB

english, 2007

9

A genotype calling algorithm for the Illumina BeadArray platform

Teo, Y. Y., Inouye, M., Small, K. S., Gwilliam, R., Deloukas, P., Kwiatkowski, D. P., Clark, T. G.

Journal:

Year:

2007

Language:

english

File:

PDF, 591 KB

english, 2007

10

Exploring the functional landscape of gene expression: directed search of large microarray compendia

Hibbs, M. A., Hess, D. C., Myers, C. L., Huttenhower, C., Li, K., Troyanskaya, O. G.

Journal:

Year:

2007

Language:

english

File:

PDF, 510 KB

english, 2007

11

Identification of compositionally distinct regions in genomes using the centroid method

Rajan, I., Aravamuthan, S., Mande, S. S.

Journal:

Year:

2007

Language:

english

File:

PDF, 172 KB

english, 2007

12

A parsimonious threshold-independent protein feature selection method through the area under receiver operating characteristic curve

Wang, Z., Chang, Y.-c. I., Ying, Z., Zhu, L., Yang, Y.

Journal:

Year:

2007

Language:

english

File:

PDF, 150 KB

english, 2007

13

AVIS: AJAX viewer of interactive signaling networks

Berger, S. I., Iyengar, R., Ma'ayan, A.

Journal:

Year:

2007

Language:

english

File:

PDF, 165 KB

english, 2007

14

Clustering by soft-constraint affinity propagation: applications to gene-expression data

Leone, M., Sumedha,, Weigt, M.

Journal:

Year:

2007

Language:

english

File:

PDF, 177 KB

english, 2007

15

Structure-based calculation of drug efficiency indices

Hetenyi, C., Maran, U., Garcia-Sosa, A. T., Karelson, M.

Journal:

Year:

2007

Language:

english

File:

PDF, 300 KB

english, 2007

16

Metal reduction kinetics in Shewanella

Lall, R., Mitchell, J.

Journal:

Year:

2007

Language:

english

File:

PDF, 360 KB

english, 2007

17

A syntactic model to design and verify synthetic genetic constructs derived from standard biological parts

Cai, Y., Hartnett, B., Gustafsson, C., Peccoud, J.

Journal:

Year:

2007

Language:

english

File:

PDF, 212 KB

english, 2007

18

Learning string similarity measures for gene/protein name dictionary look-up using logistic regression

Tsuruoka, Y., McNaught, J., Tsujii, J., c., Ananiadou, S.

Journal:

Year:

2007

Language:

english

File:

PDF, 155 KB

english, 2007

19

Fun&Co: identification of key functional differences in transcriptomes

Gamberoni, G., Lamma, E., Lodo, G., Marchesini, J., Mascellani, N., Rossi, S., Storari, S., Tagliavini, L., Volinia, S.

Journal:

Year:

2007

Language:

english

File:

PDF, 293 KB

english, 2007

20

Exploiting sample variability to enhance multivariate analysis of microarray data

Moller-Levet, C. S., West, C. M., Miller, C. J.

Journal:

Year:

2007

Language:

english

File:

PDF, 414 KB

english, 2007

21

Construction of a reference gene association network from multiple profiling data: application to data analysis

Ucar, D., Neuhaus, I., Ross-MacDonald, P., Tilford, C., Parthasarathy, S., Siemers, N., Ji, R.-R.

Journal:

Year:

2007

Language:

english

File:

PDF, 258 KB

english, 2007

22

The DOMON domains are involved in heme and sugar recognition

Iyer, L. M., Anantharaman, V., Aravind, L.

Journal:

Year:

2007

Language:

english

File:

PDF, 299 KB

english, 2007

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