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Volume 31; Issue 3
Main
Bioinformatics
Volume 31; Issue 3
Bioinformatics
Volume 31; Issue 3
1
SNP-SIG 2013: the state of the art of genomic variant interpretation
Bromberg, Y.
,
Capriotti, E.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 142 KB
Your tags:
english, 2015
2
MulRF: a software package for phylogenetic analysis using multi-copy gene trees
Chaudhary, R.
,
Fernandez-Baca, D.
,
Burleigh, J. G.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 68 KB
Your tags:
english, 2015
3
Visual workflows for 13C-metabolic flux analysis
Noh, K.
,
Droste, P.
,
Wiechert, W.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 835 KB
Your tags:
english, 2015
4
PDB-wide collection of binding data: current status of the PDBbind database
Liu, Z.
,
Li, Y.
,
Han, L.
,
Li, J.
,
Liu, J.
,
Zhao, Z.
,
Nie, W.
,
Liu, Y.
,
Wang, R.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 1.02 MB
Your tags:
english, 2015
5
Rcount: simple and flexible RNA-Seq read counting
Schmid, M. W.
,
Grossniklaus, U.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 228 KB
Your tags:
english, 2015
6
SIST: stress-induced structural transitions in superhelical DNA
Zhabinskaya, D.
,
Madden, S.
,
Benham, C. J.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 103 KB
Your tags:
english, 2015
7
An alternative approach to multiple testing for methylation QTL mapping reduces the proportion of falsely identified CpGs
Luijk, R.
,
Goeman, J. J.
,
Slagboom, E. P.
,
Heijmans, B. T.
,
van Zwet, E. W.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 288 KB
Your tags:
english, 2015
8
NOVA: a software to analyze complexome profiling data
Giese, H.
,
Ackermann, J.
,
Heide, H.
,
Bleier, L.
,
Drose, S.
,
Wittig, I.
,
Brandt, U.
,
Koch, I.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 954 KB
Your tags:
english, 2015
9
LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks
Hu, J.
,
Reinert, K.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 255 KB
Your tags:
english, 2015
10
CompMap: a reference-based compression program to speed up read mapping to related reference sequences
Zhu, Z.
,
Li, L.
,
Zhang, Y.
,
Yang, Y.
,
Yang, X.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 295 KB
Your tags:
english, 2015
11
VCF2Networks: applying genotype networks to single-nucleotide variants data
Dall'Olio, G. M.
,
Vahdati, A. R.
,
Bertranpetit, J.
,
Wagner, A.
,
Laayouni, H.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 174 KB
Your tags:
english, 2015
12
Integrative data analysis indicates an intrinsic disordered domain character of Argonaute-binding motifs
Zielezinski, A.
,
Karlowski, W. M.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 929 KB
Your tags:
english, 2015
13
Log-odds sequence logos
Yu, Y.-K.
,
Capra, J. A.
,
Stojmirovi , A.
,
Landsman, D.
,
Altschul, S. F.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 512 KB
Your tags:
english, 2015
14
Computing autocatalytic sets to unravel inconsistencies in metabolic network reconstructions
Schmidt, R.
,
Waschina, S.
,
Boettger-Schmidt, D.
,
Kost, C.
,
Kaleta, C.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 364 KB
Your tags:
english, 2015
15
Inference of protein kinetics by stochastic modeling and simulation of fluorescence recovery after photobleaching experiments
Rapsomaniki, M. A.
,
Cinquemani, E.
,
Giakoumakis, N. N.
,
Kotsantis, P.
,
Lygeros, J.
,
Lygerou, Z.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 748 KB
Your tags:
english, 2015
16
ExomeAI: detection of recurrent allelic imbalance in tumors using whole-exome sequencing data
Nadaf, J.
,
Majewski, J.
,
Fahiminiya, S.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 93 KB
Your tags:
english, 2015
17
PhosphoPICK: modelling cellular context to map kinase-substrate phosphorylation events
Patrick, R.
,
Le Cao, K.-A.
,
Kobe, B.
,
Boden, M.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 146 KB
Your tags:
english, 2015
18
Pooled assembly of marine metagenomic datasets: enriching annotation through chimerism
Magasin, J. D.
,
Gerloff, D. L.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 1008 KB
Your tags:
english, 2015
19
Deviance residuals-based sparse PLS and sparse kernel PLS regression for censored data
Bastien, P.
,
Bertrand, F.
,
Meyer, N.
,
Maumy-Bertrand, M.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 712 KB
Your tags:
english, 2015
20
Tabhu: tools for antibody humanization
Olimpieri, P. P.
,
Marcatili, P.
,
Tramontano, A.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 58 KB
Your tags:
english, 2015
21
SNPsnap: a Web-based tool for identification and annotation of matched SNPs
Pers, T. H.
,
Timshel, P.
,
Hirschhorn, J. N.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 180 KB
Your tags:
english, 2015
22
GeneNet Toolbox for MATLAB: a flexible platform for the analysis of gene connectivity in biological networks
Taylor, A.
,
Steinberg, J.
,
Andrews, T. S.
,
Webber, C.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 95 KB
Your tags:
english, 2015
23
WhopGenome: high-speed access to whole-genome variation and sequence data in R
Wittelsburger, U.
,
Pfeifer, B.
,
Lercher, M. J.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 90 KB
Your tags:
english, 2015
24
Using the plurality of codon positions to identify deleterious variants in human exomes
Subramanian, S.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 326 KB
Your tags:
english, 2015
25
FungiFun2: a comprehensive online resource for systematic analysis of gene lists from fungal species
Priebe, S.
,
Kreisel, C.
,
Horn, F.
,
Guthke, R.
,
Linde, J.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 224 KB
Your tags:
english, 2015
26
OrthoInspector 2.0: Software and database updates
Linard, B.
,
Allot, A.
,
Schneider, R.
,
Morel, C.
,
Ripp, R.
,
Bigler, M.
,
Thompson, J. D.
,
Poch, O.
,
Lecompte, O.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 191 KB
Your tags:
english, 2015
27
A stochastic automaton model for simulating kinesin processivity
Khataee, H.
,
Liew, A. W.-C.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 457 KB
Your tags:
english, 2015
28
DupliPHY-Web: a web server for DupliPHY and DupliPHY-ML
Ames, R. M.
,
Lovell, S. C.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 167 KB
Your tags:
english, 2015
29
Genome measures used for quality control are dependent on gene function and ancestry
Wang, J.
,
Raskin, L.
,
Samuels, D. C.
,
Shyr, Y.
,
Guo, Y.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 154 KB
Your tags:
english, 2015
30
Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli
Vlasblom, J.
,
Zuberi, K.
,
Rodriguez, H.
,
Arnold, R.
,
Gagarinova, A.
,
Deineko, V.
,
Kumar, A.
,
Leung, E.
,
Rizzolo, K.
,
Samanfar, B.
,
Chang, L.
,
Phanse, S.
,
Golshani, A.
,
Greenblatt, J. F.
,
Houry, W. A.
,
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 338 KB
Your tags:
english, 2015
31
The RNA shapes studio
Janssen, S.
,
Giegerich, R.
Journal:
Bioinformatics
Year:
2015
Language:
english
File:
PDF, 689 KB
Your tags:
english, 2015
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