Volume 10

Bioinformatics and Biology Insights

Volume 10

1

In Silico Structure Prediction of Human Fatty Acid Synthase–Dehydratase: A Plausible Model for Understanding Active Site Interactions

John, Arun, Umashankar, Vetrivel, Samdani, A., Sangeetha, Manoharan, Krishnakumar, Subramanian, Deepa, Perinkulam Ravi

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 6.69 MB

english, 2016

2

Use of Metatranscriptomics in Microbiome Research

Bashiardes, Stavros, Zilberman-Schapira, Gili, Elinav, Eran

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 400 KB

english, 2016

3

Clustering Algorithms: Their Application to Gene Expression Data

Oyelade, Jelili, Isewon, Itunuoluwa, Oladipupo, Funke, Aromolaran, Olufemi, Uwoghiren, Efosa, Ameh, Faridah, Achas, Moses, Adebiyi, Ezekiel

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

4

PDBparam: Online Resource for Computing Structural Parameters of Proteins

Nagarajan, R., Archana, A., Thangakani, A. Mary, Jemimah, S., Velmurugan, D., Gromiha, M. Michael

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 1.86 MB

english, 2016

5

Article Commentary: Nematode Sodium Calcium Exchangers: A Surprising Lack of Transport

Sharma, Vishal, O'Halloran, Damien M.

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 355 KB

english, 2016

6

Practical Approaches for Mining Frequent Patterns in Molecular Datasets

Naulaerts, Stefan, Moens, Sandy, Engelen, Kristof, Berghe, Wim Vanden, Goethals, Bart, Laukens, Kris, Meysman, Pieter

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 5.39 MB

english, 2016

7

Structural Prediction and In Silico Physicochemical Characterization for Mouse Caltrin I and Bovine Caltrin Proteins

Grasso, Ernesto J., Sottile, Adolfo E., Coronel, Carlos E.

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 8.52 MB

english, 2016

8

Interaction Analysis of T7 RNA Polymerase with Heparin and Its Low Molecular Weight Derivatives – An in Silico Approach

Borkotoky, Subhomoi, Meena, Chetan Kumar, Murali, Ayaluru

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 2.69 MB

english, 2016

9

Genome Data Exploration Using Correspondence Analysis

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 2.06 MB

english, 2016

10

Molecular Shape Analysis-Guided Virtual Screening Platform for Adenosine Kinase Inhibitors

Bhutoria, Savita, Das, Ballari, Ghoshal, Nanda

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 2.07 MB

english, 2016

11

Modeling Intercellular Communication as a Survival Strategy of Cancer Cells: An in Silico Approach on a Flexible Bioinformatics Framework

Cárdenas-García, Maura, González-Pérez, Pedro P., Montagna, Sara, Cortés, Oscar Sánchez, Caballero, Elena Hernández

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 8.11 MB

english, 2016

12

Computational Identification of Novel Genes: Current and Future Perspectives

Klasberg, Steffen, Bitard-Feildel, Tristan, Mallet, Ludovic

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 652 KB

english, 2016

13

Vaccine Design for H5N1 Based on B- and T-cell Epitope Predictions

Tambunan, Usman Sumo Friend, Sipahutar, Feimmy Ruth Pratiwi, Parikesit, Arli Aditya, Kerami, Djati

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 1.61 MB

english, 2016

14

Integrating Epigenomics into the Understanding of Biomedical Insight

Han, Yixing, He, Ximiao

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 621 KB

english, 2016

15

Survey of Genes Involved in Biosynthesis, Transport, and Signaling of Phytohormones with Focus on Solanum lycopersicum

Simm, Stefan, Scharf, Klaus-Dieter, Jegadeesan, Sridharan, Chiusano, Maria Luisa, Firon, Nurit, Schleiff, Enrico

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

16

Modeling of the Glycolysis Pathway in Plasmodium falciparum using Petri Nets

Oyelade, Jelili, Isewon, Itunuoluwa, Rotimi, Solomon, Okunoren, Ifeoluwa

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 1.85 MB

english, 2016

17

Evolution of Synonymous Codon Usage in the Mitogenomes of Certain Species of Bilaterian Lineage with Special Reference to Chaetognatha

Karumathil, Sudeesh, Dirisala, Vijaya R., Srinadh, Uthpala, Nikhil, Valaboju, Kumar, N. Satya Sampath, Nair, Rahul R.

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 2.20 MB

english, 2016

18

Analysis of Parallel Algorithms on SMP Node and Cluster of Workstations Using Parallel Programming Models with New Tile-based Method for Large Biological Datasets

Shrimankar, D. D., Sathe, S. R.

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 1.48 MB

english, 2016

19

Phylogenetic and Structural Analysis of the Pluripotency Factor Sex-Determining Region Y box2 Gene of Camelus dromedarius (cSox2)

Alawad, Abdullah, Alharbi, Sultan, Alhazzaa, Othman, Alagrafi, Faisal, Alkhrayef, Mohammed, Alhamdan, Ziyad, Alenazi, Abdullah, Al-Johi, Hasan, Alanazi, Ibrahim O., Hammad, Mohamed

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 4.42 MB

english, 2016

20

Molecular Modeling and Phylogeny of the Krüppel-like Factor 4 (cKLF4) Protein from the Arabian Camel, Camelus dromedarius

Alawad, Abdullah O., Alharbi, Sultan N., Alhazzaa, Othman A., Alagrafi, Faisal S., Alkhrayef, Mohammad N., Alhamdan, Ziyad A., Alenazi, Abdullah D., Hammad, Mohamed, Alyahya, Sami A., AlJohi, Hasan A.

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 7.97 MB

english, 2016

21

PIMADb: A Database of Protein–Protein Interactions in Huge Macromolecular Assemblies

Mathew, Oommen K., Sowdhamini, Ramanathan

Journal:

Bioinformatics and Biology Insights

Year:

2016

File:

PDF, 1.99 MB

2016

22

S2M: A Stochastic Simulation Model of Poliovirus Genetic State Transition

Zhou, Carol L. Ecale

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 2.10 MB

english, 2016

23

OSG-GEM: Gene Expression Matrix Construction Using the Open Science Grid

Poehlman, William L., Rynge, Mats, Branton, Chris, Balamurugan, D., Feltus, Frank A.

Journal:

Bioinformatics and Biology Insights

Year:

2016

File:

PDF, 684 KB

2016