Volume 103; Issue 2

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Biosystems
Volume 103; Issue 2

Biosystems

Volume 103; Issue 2

1

Overview: Early history of crop growth and photosynthesis modeling

Mabrouk A. El-Sharkawy

Journal:

Year:

2011

Language:

english

File:

PDF, 234 KB

english, 2011

2

Gradients of seed photosynthesis and its role for oxygen balancing

Henning Tschiersch, Ljudmilla Borisjuk, Twan Rutten, Hardy Rolletschek

Journal:

Year:

2011

Language:

english

File:

PDF, 1.45 MB

english, 2011

3

Modelling 18O2 and 16O2 unidirectional fluxes in plants: II. Analysis of Rubisco evolution

Marcel J. André

Journal:

Year:

2011

Language:

english

File:

PDF, 882 KB

english, 2011

4

Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities

Sergio Grimbs, Anne Arnold, Aneta Koseska, Jürgen Kurths, Joachim Selbig, Zoran Nikoloski

Journal:

Year:

2011

Language:

english

File:

PDF, 846 KB

english, 2011

5

Kinetic analyses and mathematical modeling of primary photochemical and photoelectrochemical processes in plant photosystems

Journal:

Year:

2011

Language:

english

File:

PDF, 1.25 MB

english, 2011

6

Rhodobase, a meta-analytical tool for reconstructing gene regulatory networks in a model photosynthetic bacterium

Oleg V. Moskvin, Dmitry Bolotin, Andrew Wang, Pavel S. Ivanov, Mark Gomelsky

Journal:

Year:

2011

Language:

english

File:

PDF, 889 KB

english, 2011

7

Computational analysis of the oscillatory dynamics in the processes of CO2 assimilation and photorespiration

Andrey Yu. Dubinsky, Alexander A. Ivlev

Journal:

Year:

2011

Language:

english

File:

PDF, 322 KB

english, 2011

8

Computational analysis of fluorescence induction curves in intact spinach leaves treated at different pH

Teena Tongra, Pooja Mehta, Sonal Mathur, Divya Agrawal, Sudhakar Bharti, Dmitry A. Los, Suleyman I. Allakhverdiev, Anjana Jajoo

Journal:

Year:

2011

Language:

english

File:

PDF, 1001 KB

english, 2011

9

Dynamics and mechanisms of oscillatory photosynthesis

Marc R. Roussel, Abir U. Igamberdiev

Journal:

Year:

2011

Language:

english

File:

PDF, 729 KB

english, 2011

10

Functional and topological aspects of pH-dependent regulation of electron and proton transport in chloroplasts in silico

Alexey V. Vershubskii, Ilya V. Kuvykin, Vladimir I. Priklonskii, Alexander N. Tikhonov

Journal:

Year:

2011

Language:

english

File:

PDF, 1.36 MB

english, 2011

11

A quantum mechanical analysis of the light-harvesting complex 2 (LH2) from purple photosynthetic bacteria: Insights into the electrostatic effects of transmembrane helices

Fabio Pichierri

Journal:

Year:

2011

Language:

english

File:

PDF, 1.14 MB

english, 2011

12

Computer simulation of interaction of photosystem 1 with plastocyanin and ferredoxin

Ilya B. Kovalenko, Anna M. Abaturova, Galina Yu. Riznichenko, Andrei B. Rubin

Journal:

Year:

2011

Language:

english

File:

PDF, 3.37 MB

english, 2011

13

PS II model based analysis of transient fluorescence yield measured on whole leaves of Arabidopsis thaliana after excitation with light flashes of different energies

N.E. Belyaeva, F.-J. Schmitt, V.Z. Paschenko, G.Yu. Riznichenko, A.B. Rubin, G. Renger

Journal:

Year:

2011

Language:

english

File:

PDF, 985 KB

english, 2011

14

Optimization of CO2 fixation in photosynthetic cells via thermodynamic buffering

Abir U. Igamberdiev, Leszek A. Kleczkowski

Journal:

Year:

2011

Language:

english

File:

PDF, 356 KB

english, 2011

15

Modelling 18O2 and 16O2 unidirectional fluxes in plants: I. Regulation of pre-industrial atmosphere

Marcel J. André

Journal:

Year:

2011

Language:

english

File:

PDF, 623 KB

english, 2011

16

Estimating daytime ecosystem respiration from eddy-flux data

Dan Bruhn, Teis N. Mikkelsen, Mathias Herbst, Werner L. Kutsch, Marilyn C. Ball, Kim Pilegaard

Journal:

Year:

2011

Language:

english

File:

PDF, 297 KB

english, 2011

17

Modeling and simulation of the initial phases of chlorophyll fluorescence from Photosystem II

Ya Guo, Jinglu Tan

Journal:

Year:

2011

Language:

english

File:

PDF, 644 KB

english, 2011

18

A minimal mathematical model of nonphotochemical quenching of chlorophyll fluorescence

Oliver Ebenhöh, Torsten Houwaart, Heiko Lokstein, Stephanie Schlede, Katrin Tirok

Journal:

Year:

2011

Language:

english

File:

PDF, 551 KB

english, 2011

19

Quantitative analysis of photosynthetic carbon metabolism in protoplasts and intact leaves of barley. Determination of carbon fluxes and pool sizes of metabolites in different cellular compartments

Olav Keerberg, Hiie Ivanova, Hille Keerberg, Tiit Pärnik, Peeter Talts, Per Gardeström

Journal:

Year:

2011

Language:

english

File:

PDF, 1.25 MB

english, 2011

20

E-photosynthesis: Web-based platform for modeling of complex photosynthetic processes

David Šafránek, Jan Červený, Matěj Klement, Jana Pospíšilová, Luboš Brim, Dušan Lazár, Ladislav Nedbal

Journal:

Year:

2011

Language:

english

File:

PDF, 2.16 MB

english, 2011

21

The single-process biochemical reaction of Rubisco: A unified theory and model with the effects of irradiance, CO2 and rate-limiting step on the kinetics of C3 and C4 photosynthesis from gas exchange

Hadi Farazdaghi

Journal:

Year:

2011

Language:

english

File:

PDF, 998 KB

english, 2011

22

Special issue: Computational models in photosynthesis

Abir U. Igamberdiev

Journal:

Year:

2011

Language:

english

File:

PDF, 93 KB

english, 2011

23

Editorial Board

Journal:

Year:

2011

Language:

english

File:

PDF, 42 KB

english, 2011