Volume 19; Issue S14

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BMC Bioinformatics
Volume 19; Issue S14

BMC Bioinformatics

Volume 19; Issue S14

1

The predictive performance of short-linear motif features in the prediction of calmodulin-binding proteins

Li, Yixun, Maleki, Mina, Carruthers, Nicholas J., Stemmer, Paul M., Ngom, Alioune, Rueda, Luis

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 2.82 MB

english, 2018

2

Automated shape-based clustering of 3D immunoglobulin protein structures in chronic lymphocytic leukemia

Polychronidou, Eleftheria, Kalamaras, Ilias, Agathangelidis, Andreas, Sutton, Lesley-Ann, Yan, Xiao-Jie, Bikos, Vasilis, Vardi, Anna, Mochament, Konstantinos, Chiorazzi, Nicholas, Belessi, Chrysoula,

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.66 MB

english, 2018

3

Deep learning architectures for prediction of nucleosome positioning from sequences data

Di Gangi, Mattia, Lo Bosco, Giosuè, Rizzo, Riccardo

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.02 MB

english, 2018

4

Computational discovery of direct associations between GO terms and protein domains

Alborzi, Seyed Ziaeddin, Ritchie, David W., Devignes, Marie-Dominique

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.73 MB

english, 2018

5

Expression analysis of RNA sequencing data from human neural and glial cell lines depends on technical replication and normalization methods

Knight, V. Bleu, Serrano, Elba E.

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 3.99 MB

english, 2018

6

The poly-omics of ageing through individual-based metabolic modelling

Yaneske, Elisabeth, Angione, Claudio

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 3.01 MB

english, 2018

7

TransFlow: a modular framework for assembling and assessing accurate de novo transcriptomes in non-model organisms

Seoane, Pedro, Espigares, Marina, Carmona, Rosario, Polonio, Álvaro, Quintana, Julia, Cretazzo, Enrico, Bota, Josefina, Pérez-García, Alejandro, Dios Alché, Juan de, Gómez, Luis, Claros, M. Gonzalo

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.87 MB

english, 2018

8

Flexible docking-based molecular dynamics simulation of natural product compounds and Ebola virus Nucleocapsid (EBOV NP): a computational approach to discover new drug for combating Ebola

Nasution, Mochammad Arfin Fardiansyah, Toepak, Erwin Prasetya, Alkaff, Ahmad Husein, Tambunan, Usman Sumo Friend

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 5.04 MB

english, 2018

9

Computational prediction of inter-species relationships through omics data analysis and machine learning

Leite, Diogo Manuel Carvalho, Brochet, Xavier, Resch, Grégory, Que, Yok-Ai, Neves, Aitana, Peña-Reyes, Carlos

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.49 MB

english, 2018

10

TMFUF: a triple matrix factorization-based unified framework for predicting comprehensive drug-drug interactions of new drugs

Shi, Jian-Yu, Huang, Hua, Li, Jia-Xin, Lei, Peng, Zhang, Yan-Ning, Dong, Kai, Yiu, Siu-Ming

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.14 MB

english, 2018

11

Evaluating the impact of topological protein features on the negative examples selection

Boldi, Paolo, Frasca, Marco, Malchiodi, Dario

Journal:

BMC Bioinformatics

Year:

2018

File:

PDF, 2.36 MB

2018

12

Insights into mammalian transcription control by systematic analysis of ChIP sequencing data

Devailly, Guillaume, Joshi, Anagha

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 5.92 MB

english, 2018

13

DNA sequences alignment in multi-GPUs: acceleration and energy payoff

Pérez-Serrano, Jesús, Sandes, Edans, Magalhaes Alves de Melo, Alba Cristina, Ujaldón, Manuel

Journal:

BMC Bioinformatics

Year:

2018

File:

PDF, 2.92 MB

2018