Volume 21; Issue S13

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BMC Bioinformatics
Volume 21; Issue S13

BMC Bioinformatics

Volume 21; Issue S13

1

A learning-based method for drug-target interaction prediction based on feature representation learning and deep neural network

Peng, Jiajie, Li, Jingyi, Shang, Xuequn

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 1.37 MB

2020

2

Liver imaging features by convolutional neural network to predict the metachronous liver metastasis in stage I-III colorectal cancer patients based on preoperative abdominal CT scan

Lee, Sangwoo, Choe, Eun Kyung, Kim, So Yeon, Kim, Hua Sun, Park, Kyu Joo, Kim, Dokyoon

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 1.02 MB

2020

3

MAIRA- real-time taxonomic and functional analysis of long reads on a laptop

Albrecht, Benjamin, BaÄcÄ±, Caner, Huson, Daniel H.

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 1.71 MB

2020

4

EnClaSC: a novel ensemble approach for accurate and robust cell-type classification of single-cell transcriptomes

Chen, Xiaoyang, Chen, Shengquan, Jiang, Rui

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 2.17 MB

2020

5

A consensus multi-view multi-objective gene selection approach for improved sample classification

Acharya, Sudipta, Cui, Laizhong, Pan, Yi

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 2.02 MB

2020

6

Computationally identifying hot spots in protein-DNA binding interfaces using an ensemble approach

Pan, Yuliang, Zhou, Shuigeng, Guan, Jihong

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 1.96 MB

2020

7

Prediction of hot spots in proteinâDNA binding interfaces based on supervised isometric feature mapping and extreme gradient boosting

Li, Ke, Zhang, Sijia, Yan, Di, Bin, Yannan, Xia, Junfeng

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 872 KB

2020

8

Model-based clustering for flow and mass cytometry data with clinical information

Abe, Ko, Minoura, Kodai, Maeda, Yuka, Nishikawa, Hiroyoshi, Shimamura, Teppei

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 2.21 MB

2020

9

Explicit representation of protein activity states significantly improves causal discovery of protein phosphorylation networks

Liu, Jinling, Ma, Xiaojun, Cooper, Gregory F., Lu, Xinghua

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 1.59 MB

2020

10

Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation

LÃ¼, Yongchun, Zeng, Xiangrui, Tian, Xinhui, Shi, Xiao, Wang, Hui, Zheng, Xiaohui, Liu, Xiaodong, Zhao, Xiaofang, Gao, Xin, Xu, Min

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 3.48 MB

2020

11

Multi-omics profiling reveals microRNA-mediated insulin signaling networks

Lin, Yang-Chi-Dung, Huang, Hsi-Yuan, Shrestha, Sirjana, Chou, Chih-Hung, Chen, Yen-Hua, Chen, Chi-Ru, Hong, Hsiao-Chin, Li, Jing, Chang, Yi-An, Chiew, Men-Yee, Huang, Ya-Rong, Tu, Siang-Jyun, Sun, Tin

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 2.66 MB

2020

12

Developing the novel bioinformatics algorithms to systematically investigate the connections among survival time, key genes and proteins for Glioblastoma multiforme

You, Yujie, Ru, Xufang, Lei, Wanjing, Li, Tingting, Xiao, Ming, Zheng, Huiru, Chen, Yujie, Zhang, Le

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 2.37 MB

2020

13

NEDD: a network embedding based method for predicting drug-disease associations

Zhou, Renyi, Lu, Zhangli, Luo, Huimin, Xiang, Ju, Zeng, Min, Li, Min

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 842 KB

2020

14

Twadn: an efficient alignment algorithm based on time warping for pairwise dynamic networks

Zhong, Yuanke, Li, Jing, He, Junhao, Gao, Yiqun, Liu, Jie, Wang, Jingru, Shang, Xuequn, Hu, Jialu

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 1.76 MB

2020

15

Biomedical document triage using a hierarchical attention-based capsule network

Wang, Jian, Li, Mengying, Diao, Qishuai, Lin, Hongfei, Yang, Zhihao, Zhang, YiJia

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 2.26 MB

2020

16

GPU acceleration of Darwin read overlapper for de novo assembly of long DNA reads

Ahmed, Nauman, Qiu, Tong Dong, Bertels, Koen, Al-Ars, Zaid

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 2.14 MB

2020