Volume 8; Issue 1

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BMC Molecular Biology
Volume 8; Issue 1

BMC Molecular Biology

Volume 8; Issue 1

1

Chicken ovalbumin upstream promoter transcription factor II regulates uncoupling protein 3 gene transcription inPhodopus sungorus

Tobias Fromme, Kathrin Reichwald, Matthias Platzer, Xing-Sheng Li, Martin Klingenspor

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.92 MB

english, 2007

2

Appropriate 'housekeeping' genes for use in expression profiling the effects of environmental estrogens in fish

Amy L Filby, Charles R Tyler

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 899 KB

english, 2007

3

Translation initiation region sequence preferences inEscherichia coli

Vladimir Vimberg, Age Tats, Maido Remm, Tanel Tenson

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.35 MB

english, 2007

4

Hepatoma derived growth factor binds DNA through the N-terminal PWWP domain

Jun Yang, Allen D Everett

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.02 MB

english, 2007

5

Localization of TFIIB binding regions using serial analysis of chromatin occupancy

Gregory S Yochum, Veena Rajaraman, Ryan Cleland, Shannon McWeeney

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 303 KB

english, 2007

6

Detection of short repeated genomic sequences on metaphase chromosomes using padlock probes and target primed rolling circle DNA synthesis

Jakob S Lohmann, Magnus Stougaard, Jørn Koch

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.72 MB

english, 2007

7

The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate:sugar phosphotransferase system (PTS) inCorynebacterium glutamicum

Lars Gaigalat, Jan-Philip Schlüter, Michelle Hartmann, Sascha Mormann, Andreas Tauch, Alfred Pühler, Jörn Kalinowski

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.09 MB

english, 2007

8

Alternative polyadenylation signals and promoters act in concert to control tissue-specific expression of the Opitz Syndrome geneMID1

Jennifer Winter, Melanie Kunath, Stefan Roepcke, Sven Krause, Rainer Schneider, Susann Schweiger

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 764 KB

english, 2007

9

Human NCU-G1 can function as a transcription factor and as a nuclear receptor co-activator

Knut R Steffensen, Mariam Bouzga, Frode Skjeldal, Cecilie Kasi, Almira Karahasan, Vilborg Matre, Oddmund Bakke, Sylvain Guérin, Winnie Eskild

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 3.65 MB

english, 2007

10

Evaluation and validation of candidate endogenous control genes for real-time quantitative PCR studies of breast cancer

Roisin E McNeill, Nicola Miller, Michael J Kerin

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 381 KB

english, 2007

11

Long-term stability of RNA in post-mortem bovine skeletal muscle, liver and subcutaneous adipose tissues

Bojlul Bahar, Frank J Monahan, Aidan P Moloney, Olaf Schmidt, David E MacHugh, Torres Sweeney

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 750 KB

english, 2007

12

Biased exonization of transposed elements in duplicated genes: A lesson from the TIF-IA gene

Maayan Amit, Noa Sela, Hadas Keren, Ze'ev Melamed, Inna Muler, Noam Shomron, Shai Izraeli, Gil Ast

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.70 MB

english, 2007

13

Prediction of highly expressed genes in microbes based on chromatin accessibility

Hanni Willenbrock, David W Ussery

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 493 KB

english, 2007

14

Tissue factor pathway inhibitor-2 was repressed by CpG hypermethylation through inhibition of KLF6 binding in highly invasive breast cancer cells

Hongshen Guo, Yifeng Lin, Hongwei Zhang, Juan Liu, Nong Zhang, Yiming Li, Desheng Kong, Qiqun Tang, Duan Ma

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.08 MB

english, 2007

15

The 3' untranslated region of humanCyclin-Dependent Kinase 5 Regulatory subunit 1contains regulatory elements affecting transcript stability

Silvia Moncini, Annamaria Bevilacqua, Marco Venturin, Claudia Fallini, Antonia Ratti, Angelo Nicolin, Paola Riva

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.38 MB

english, 2007

16

Checkpoint independence of most DNA replication origins in fission yeast

Katie L Mickle, Sunita Ramanathan, Adam Rosebrock, Anna Oliva, Amna Chaudari, Chulee Yompakdee, Donna Scott, Janet Leatherwood, Joel A Huberman

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.03 MB

english, 2007

17

Relative quantification of mRNA: comparison of methods currently used for real-time PCR data analysis

Štefan Čikoš, Alexandra Bukovská, Juraj Koppel

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 497 KB

english, 2007

18

Identifying the most suitable endogenous control for determining gene expression in hearts from organ donors

Silvia Pérez, Luis J Royo, Aurora Astudillo, Dolores Escudero, Francisco Álvarez, Aida Rodríguez, Enrique Gómez, Jesús Otero

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 586 KB

english, 2007

19

The venom gland transcriptome of the Desert Massasauga Rattlesnake (Sistrurus catenatus edwardsii): towards an understanding of venom composition among advanced snakes (Superfamily Colubroidea)

Susanta Pahari, Stephen P Mackessy, R Manjunatha Kini

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.51 MB

english, 2007

20

Regulation of heme oxygenase-1 mRNA deadenylation and turnover in NIH3T3 cells by nitrosative or alkylation stress

Veronica Leautaud, Bruce Demple

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 654 KB

english, 2007

21

Differential regulation of NAB corepressor genes in Schwann cells

Rajini Srinivasan, Sung-Wook Jang, Rebecca M Ward, Shrikesh Sachdev, Toshihiko Ezashi, John Svaren

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 630 KB

english, 2007

22

RNA extraction from ten year old formalin-fixed paraffin-embedded breast cancer samples: a comparison of column purification and magnetic bead-based technologies

Alfredo Ribeiro-Silva, Haiyu Zhang, Stefanie S Jeffrey

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 271 KB

english, 2007

23

Checkpoint effects and telomere amplification during DNA re-replication in fission yeast

Katie L Mickle, Anna Oliva, Joel A Huberman, Janet Leatherwood

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.37 MB

english, 2007

24

Interleukin-4 inhibition of interleukin-1-induced expression of matrix metalloproteinase-3 (MMP-3) is independent of lipoxygenase and PPARγ activation in human gingival fibroblasts

Denise Stewart, Masoud Javadi, Mariah Chambers, Chad Gunsolly, Grzegorz Gorski, Ruth C Borghaei

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 461 KB

english, 2007

25

Effects of mutations inSGS1and in genes functionally related toSGS1on inverted repeat-stimulated spontaneous unequal sister-chromatid exchange in yeast

Dilip K Nag, Steffany J Cavallo

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 290 KB

english, 2007

26

Selection of reliable reference genes for qPCR studies on chondroprotective action

Stefan Toegel, Wenwen Huang, Claudia Piana, Frank M Unger, Michael Wirth, Mary B Goldring, Franz Gabor, Helmut Viernstein

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 229 KB

english, 2007

27

Ets-2 and C/EBP-beta are important mediators of ovine trophoblast Kunitz domain protein-1 gene expression in trophoblast

Anindita Chakrabarty, R Michael Roberts

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.16 MB

english, 2007

28

The coding/non-coding overlapping architecture of the gene encoding the Drosophila pseudouridine synthase

Sara Riccardo, Giuseppe Tortoriello, Ennio Giordano, Mimmo Turano, Maria Furia

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.06 MB

english, 2007

29

Distinctive expression patterns of185/333genes in the purple sea urchin,Strongylocentrotus purpuratus: an unexpectedly diverse family of transcripts in response to LPS, β-1,3-glucan, and dsRNA

David P Terwilliger, Katherine M Buckley, Virginia Brockton, Nicole J Ritter, L Courtney Smith

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.11 MB

english, 2007

30

A cryptic promoter in potato virus X vector interrupted plasmid construction

Yuyuan Guo, Thomas L German, Ronald D Schultz

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 415 KB

english, 2007

31

Identification and characterization of bovine regulator of telomere length elongation helicase gene (RTEL): molecular cloning, expression distribution, splice variants and DNA methylation profile

Zhuo Du, DingSheng Zhao, YongHui Zhao, ShaoHua Wang, Yu Gao, Ning Li

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.03 MB

english, 2007

32

NF-κB mediates the transcription of mouse calsarcin-1 gene, but not calsarcin-2, in C2C12 cells

Heng Wang, Shulin Yang, E Yang, Zhengmao Zhu, Yulian Mu, Shutang Feng, Kui Li

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.82 MB

english, 2007

33

Two non-homologous brain diseases-related genes,SERPINI1andPDCD10, are tightly linked by an asymmetric bidirectional promoter in an evolutionarily conserved manner

Ping-Yen Chen, Wun-Shaing W Chang, Ruey-Hwang Chou, Yiu-Kay Lai, Sheng-Chieh Lin, Chia-Yi Chi, Cheng-Wen Wu

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 3.07 MB

english, 2007

34

Sp1/Sp3 and DNA-methylation contribute to basal transcriptional activation of human podoplanin in MG63 versus Saos-2 osteoblastic cells

Brigitte Hantusch, Romana Kalt, Sigurd Krieger, Christina Puri, Dontscho Kerjaschki

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 4.20 MB

english, 2007

35

Evaluation of theOPTCgene in primary open angle glaucoma: functional significance of a silent change

Moulinath Acharya, Suddhasil Mookherjee, Ashima Bhattacharjee, Sanjay KD Thakur, Arun K Bandyopadhyay, Abhijit Sen, Subhabrata Chakrabarti, Kunal Ray

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.62 MB

english, 2007

36

A systematic quantification of carbonic anhydrase transcripts in the mouse digestive system

Pei-wen Pan, Alejandra Rodriguez, Seppo Parkkila

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 844 KB

english, 2007

37

Amino acids and insulin act additively to regulate components of the ubiquitin-proteasome pathway in C2C12 myotubes

Fouzia Sadiq, David G Hazlerigg, Michael A Lomax

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.77 MB

english, 2007

38

Stripped-down DNA repair in a highly reduced parasite

Erin E Gill, Naomi M Fast

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 298 KB

english, 2007

39

Optimization of laser capture microdissection and RNA amplification for gene expression profiling of prostate cancer

Dagmar M Kube, Cemile D Savci-Heijink, Anne-Françoise Lamblin, Farhad Kosari, George Vasmatzis, John C Cheville, Donald P Connelly, George G Klee

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 625 KB

english, 2007

40

Core histone genes ofGiardia intestinalis: genomic organization, promoter structure, and expression

Janet Yee, Anita Tang, Wei-Ling Lau, Heather Ritter, Dewald Delport, Melissa Page, Rodney D Adam, Miklós Müller, Gang Wu

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 566 KB

english, 2007

41

Deletion of the cruciform binding domain in CBP/14-3-3 displays reduced origin binding and initiation of DNA replication in budding yeast

Wafaa Yahyaoui, Mario Callejo, Gerald B Price, Maria Zannis-Hadjopoulos

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.67 MB

english, 2007

42

Identification of a set of KSRP target transcripts upregulated by PI3K-AKT signaling

Tina Ruggiero, Michele Trabucchi, Marco Ponassi, Giorgio Corte, Ching-Yi Chen, Latifa al-Haj, Khalid SA Khabar, Paola Briata, Roberto Gherzi

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.91 MB

english, 2007

43

Interaction between ATM and PARP-1 in response to DNA damage and sensitization of ATM deficient cells through PARP inhibition

Rocío Aguilar-Quesada, José Antonio Muñoz-Gámez, David Martín-Oliva, Andreína Peralta, Ma Teresa Valenzuela, Rubén Matínez-Romero, Rosa Quiles-Pérez, Menissier-de Josiane Murcia, Gilbert de Murcia, Ma

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 896 KB

english, 2007

44

Antisense oligonucleotide-induced alternative splicing of theAPOBmRNA generates a novel isoform of APOB

Bernard Khoo, Xavier Roca, Shern L Chew, Adrian R Krainer

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.42 MB

english, 2007

45

Stringent and reproducible tetracycline-regulated transgene expression by site-specific insertion at chromosomal loci with pre-characterised induction characteristics

Rachel Brough, Antigoni M Papanastasiou, Andrew CG Porter

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.46 MB

english, 2007

46

Exploring cellular memory molecules marking competent and active transcriptions

Li Xin, Guo-Ling Zhou, Wei Song, Xue-Song Wu, Gong-Hong Wei, De-Long Hao, Xiang Lv, De-Pei Liu, Chih-Chuan Liang

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.30 MB

english, 2007

47

Selection strategy and the design of hybrid oligonucleotide primers for RACE-PCR: cloning a family of toxin-like sequences fromAgelena orientalis

Zhensheng Pan, Richard Barry, Alexey Lipkin, Mikhail Soloviev

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.55 MB

english, 2007

48

Transcriptional analysis of an immune-responsive serine protease from Indian malarial vector,Anopheles culicifacies

Janneth Rodrigues, Neema Agrawal, Anil Sharma, Pawan Malhotra, Tridibes Adak, Virander S Chauhan, Raj K Bhatnagar

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.36 MB

english, 2007

49

Duplication of the dystroglycan gene in most branches of teleost fish

Ernesto Pavoni, Davide Cacchiarelli, Roberta Tittarelli, Massimiliano Orsini, Antonio Galtieri, Bruno Giardina, Andrea Brancaccio

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.52 MB

english, 2007

50

The non-dosage compensatedLsp1α gene ofDrosophila melanogasterescapes acetylation by MOF in larval fat body nuclei, but is flanked by two dosage compensated genes

Vikki M Weake, Maxwell J Scott

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 390 KB

english, 2007

51

Down-regulation of human topoisomerase IIα expression correlates with relative amounts of specificity factors Sp1 and Sp3 bound at proximal and distal promoter regions

Amram O Williams, Richard J Isaacs, Kathryn M Stowell

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 560 KB

english, 2007

52

Rad9 modulates theP21WAF1pathway by direct association with p53

Kazuhiro Ishikawa, Hideshi Ishii, Yoshiki Murakumo, Koshi Mimori, Masahiko Kobayashi, Ken-ichi Yamamoto, Masaki Mori, Hiroshi Nishino, Yusuke Furukawa, Keiichi Ichimura

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 633 KB

english, 2007

53

RNA quality in frozen breast cancer samples and the influence on gene expression analysis – a comparison of three evaluation methods using microcapillary electrophoresis traces

Carina Strand, Johan Enell, Ingrid Hedenfalk, Mårten Fernö

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 892 KB

english, 2007

54

Important roles of multiple Sp1 binding sites and epigenetic modifications in the regulation of the methionine sulfoxide reductase B1 (MsrB1) promoter

Antonella De Luca, Paolo Sacchetta, Marzia Nieddu, Carmine Di Ilio, Bartolo Favaloro

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 459 KB

english, 2007

55

Bluetongue virus RNA binding protein NS2 is a modulator of viral replication and assembly

Alak Kanti Kar, Bishnupriya Bhattacharya, Polly Roy

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 3.09 MB

english, 2007

56

Coordinated regulation of Myc trans-activation targets by Polycomb and the Trithorax group protein Ash1

Julie M Goodliffe, Michael D Cole, Eric Wieschaus

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.83 MB

english, 2007

57

Leptin induces inflammation-related genes in RINm5F insulinoma cells

Paul Hekerman, Julia Zeidler, Stefanie Korfmacher, Simone Bamberg-Lemper, Holger Knobelspies, Lennart Zabeau, Jan Tavernier, Walter Becker

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.25 MB

english, 2007

58

Three novel ABCC5 splice variants in human retina and their role as regulators of ABCC5 gene expression

Jelena Stojic, Heidi Stöhr, Bernhard HF Weber

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 505 KB

english, 2007

59

Novelin vivotargets of ΔNp63 in keratinocytes identified by a modified chromatin immunoprecipitation approach

Barbara Birkaya, Kori Ortt, Satrajit Sinha

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.13 MB

english, 2007

60

Hin-mediated DNA knotting and recombining promote replicon dysfunction and mutation

Richard W Deibler, Jennifer K Mann, De Witt L Sumners, Lynn Zechiedrich

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 785 KB

english, 2007

61

Regulation of p73 by Hck through kinase-dependent and independent mechanisms

Preeti Paliwal, Vegesna Radha, Ghanshyam Swarup

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.68 MB

english, 2007

62

Dynamic resolution of functionally related gene sets in response to acute heat stress

Joseph D Szustakowski, Penelope A Kosinski, Christine A Marrese, Jee-Hyung Lee, Stephen J Elliman, Nanguneri Nirmala, Daniel M Kemp

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.36 MB

english, 2007

63

Do anesthetics and sampling strategies affect transcription analysis of fish tissues?

Pål A Olsvik, Kai K Lie, Ernst M Hevrøy

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 829 KB

english, 2007

64

Mesenchymal stem cells with high telomerase expression do not actively restore their chromosome arm specific telomere length pattern after exposure to ionizing radiation

Jesper Graakjaer, Rikke Christensen, Steen Kolvraa, Nedime Serakinci

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.12 MB

english, 2007

65

ABCA1, ABCG1 and SR-BI: hormonal regulation in primary rat hepatocytes and human cell lines

Marita Sporstøl, Seyed Ali Mousavi, Winnie Eskild, Norbert Roos, Trond Berg

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 674 KB

english, 2007

66

Zfra affects TNF-mediated cell death by interacting with death domain protein TRADD and negatively regulates the activation of NF-κB, JNK1, p53 and WOX1 during stress response

Qunying Hong, Li-Jin Hsu, Lori Schultz, Nicole Pratt, Jeffrey Mattison, Nan-Shan Chang

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 4.48 MB

english, 2007

67

Histone gene expression and histone mRNA 3' end structure inCaenorhabditis elegans

Rebecca Keall, Sandra Whitelaw, Jonathan Pettitt, Berndt Müller

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 560 KB

english, 2007

68

Mutational pattern and frequency of induced nucleotide changes in mouse ENU mutagenesis

K Ryo Takahasi, Yoshiyuki Sakuraba, Yoichi Gondo

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 257 KB

english, 2007

69

Structural and RNAi characterization of the German cockroach lipophorin receptor, and the evolutionary relationships of lipoprotein receptors

Laura Ciudad, Xavier Bellés, Maria-Dolors Piulachs

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 584 KB

english, 2007

70

Transcriptional response of pancreatic beta cells to metabolic stimulation: large scale identification of immediate-early and secondary response genes

Dominique A Glauser, Thierry Brun, Benoit R Gauthier, Werner Schlegel

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 503 KB

english, 2007

71

GAPDH is not regulated in human glioblastoma under hypoxic conditions

Harun M Said, Carsten Hagemann, Jelena Stojic, Beate Schoemig, Giles H Vince, Michael Flentje, Klaus Roosen, Dirk Vordermark

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 4.03 MB

english, 2007

72

Gene expression profiles in skeletal muscle after gene electrotransfer

Pernille Hojman, John R Zibert, Hanne Gissel, Jens Eriksen, Julie Gehl

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.02 MB

english, 2007

73

Antisense oligonucleotide induced exon skipping and the dystrophin gene transcript: cocktails and chemistries

Abbie M Adams, Penny L Harding, Patrick L Iversen, Catherine Coleman, Sue Fletcher, Steve D Wilton

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 578 KB

english, 2007

74

Vertebrate DM domain proteins bind similar DNA sequences and can heterodimerize on DNA

Mark W Murphy, David Zarkower, Vivian J Bardwell

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.83 MB

english, 2007

75

Biochemical characterization of a recombinant Japanese encephalitis virus RNA-dependent RNA polymerase

Yeon-Gu Kim, Ji-Seung Yoo, Jung-Hee Kim, Chan-Mi Kim, Jong-Won Oh

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.22 MB

english, 2007

76

An improved genetic system for detection and analysis of protein nuclear import signals

Kris S Marshall, Zhiying Zhang, Jennifer Curran, Stephanie Derbyshire, Joe S Mymryk

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 382 KB

english, 2007

77

Hormonal and nutritional regulation of alternative CD36 transcripts in rat liver – a role for growth hormone in alternative exon usage

Louisa Cheung, Malin Andersen, Carolina Gustavsson, Jacob Odeberg, Leandro Fernández-Pérez, Gunnar Norstedt, Petra Tollet-Egnell

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 496 KB

english, 2007

78

Somatic CTG•CAG repeat instability in a mouse model for myotonic dystrophy type 1 is associated with changes in cell nuclearity and DNA ploidy

Walther JAA van den Broek, Derick G Wansink, Bé Wieringa

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.23 MB

english, 2007

79

Identification of new reference genes for the normalisation of canine osteoarthritic joint tissue transcripts from microarray data

Lindsey J Maccoux, Dylan N Clements, Fiona Salway, Philip JR Day

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 432 KB

english, 2007

80

HIV-1 TAR element is processed by Dicer to yield a viral micro-RNA involved in chromatin remodeling of the viral LTR

Zachary Klase, Prachee Kale, Rafael Winograd, Madhur V Gupta, Mohammad Heydarian, Reem Berro, Timothy McCaffrey, Fatah Kashanchi

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.05 MB

english, 2007

81

A flow cytometry technique to study intracellular signals NF-κB and STAT3 in peripheral blood mononuclear cells

Sandrine Lafarge, Hind Hamzeh-Cognasse, Patricia Chavarin, Christian Genin, Olivier Garraud, Fabrice Cognasse

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 330 KB

english, 2007

82

Expression and functional analysis ofTaASY1during meiosis of bread wheat (Triticum aestivum)

Scott A Boden, Nadim Shadiac, Elise J Tucker, Peter Langridge, Jason A Able

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.57 MB

english, 2007

83

Inactivation of nucleolin leads to nucleolar disruption, cell cycle arrest and defects in centrosome duplication

Iva Ugrinova, Karine Monier, Corinne Ivaldi, Marc Thiry, Sébastien Storck, Fabien Mongelard, Philippe Bouvet

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.68 MB

english, 2007

84

Selection of reference genes for gene expression studies in pig tissues using SYBR green qPCR

Ann-Britt Nygard, Claus B Jørgensen, Susanna Cirera, Merete Fredholm

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 194 KB

english, 2007

85

Extraordinary diversity among members of the large gene family,185/333, from the purple sea urchin,Strongylocentrotus purpuratus

Katherine M Buckley, L Courtney Smith

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 757 KB

english, 2007

86

Enzymes involved in DNA ligation and end-healing in the radioresistant bacteriumDeinococcus radiodurans

Melanie Blasius, Rebecca Buob, Igor V Shevelev, Ulrich Hubscher

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 781 KB

english, 2007

87

Reduction of gene repair by selenomethionine with the use of single-stranded oligonucleotides

Timothy R Schwartz, Eric B Kmiec

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 351 KB

english, 2007

88

Alternative splicing of human peroxisome proliferator-activated receptor delta (PPARdelta):effects on translation efficiency andtrans-activation ability

Kerstin Lundell, Petra Thulin, Anders Hamsten, Ewa Ehrenborg

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.87 MB

english, 2007

89

Inactivation of NMD increases viability ofsup45nonsense mutants inSaccharomyces cerevisiae

Svetlana Chabelskaya, Valentina Gryzina, Svetlana Moskalenko, Catherine Le Goff, Galina Zhouravleva

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.01 MB

english, 2007

90

Characterization of novel transforming growth factor-beta type I receptors found in malignant pleural effusion tumor cells

Kuo-Li Chen, Wan-Hsin Liu, Yi-Yuan Yang, Sy-Jye C Leu, Neng-Yao Shih

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.15 MB

english, 2007

91

Site-specific acetylation of ISWI by GCN5

Roger Ferreira, Anton Eberharter, Tiziana Bonaldi, Mariacristina Chioda, Axel Imhof, Peter B Becker

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 821 KB

english, 2007

92

Rod-derived Cone Viability Factor-2 is a novel bifunctional-thioredoxin-like protein with therapeutic potential

Frédéric Chalmel, Thierry Léveillard, Céline Jaillard, Aurélie Lardenois, Naomi Berdugo, Emmanuelle Morel, Patrice Koehl, George Lambrou, Arne Holmgren, José A Sahel, Olivier Poch

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 3.32 MB

english, 2007

93

The promoter regions of the Myb-regulatedAdora2BandMcm4genes co-localize with origins of DNA replication

Holger Gundelach, Daniel Braas, Karl-Heinz Klempnauer

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 905 KB

english, 2007

94

HAP1 can sequester a subset of TBP in cytoplasmic inclusions via specific interaction with the conserved TBPCORE

Justin R Prigge, Edward E Schmidt

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.55 MB

english, 2007

95

PlasmaDNA: a free, cross-platform plasmid manipulation program for molecular biology laboratories

Alexandre Angers-Loustau, Jeffrey Rainy, Kirmo Wartiovaara

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 318 KB

english, 2007

96

GATA elements control repression of cardiac troponin I promoter activity in skeletal muscle cells

Raffaella Di Lisi, Anne Picard, Simonetta Ausoni, Stefano Schiaffino

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 716 KB

english, 2007

97

Prediction and preliminary validation of oncogene regulation by miRNAs

Edyta Koscianska, Vesselin Baev, Konstantinia Skreka, Katerina Oikonomaki, Ventsislav Rusinov, Martin Tabler, Kriton Kalantidis

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 994 KB

english, 2007

98

Characterization of an Oct1 orthologue in the channel catfish,Ictalurus punctatus: A negative regulator of immunoglobulin gene transcription?

Mara L Lennard, Jun-ichi Hikima, David A Ross, Corine P Kruiswijk, Melanie R Wilson, Norman W Miller, Gregory W Warr

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.89 MB

english, 2007

99

Construction and evaluation of multisite recombinatorial (Gateway) cloning vectors for Gram-positive bacteria

Tania M Perehinec, Saara NA Qazi, Sanyasi R Gaddipati, Vyvyan Salisbury, Catherine ED Rees, Philip J Hill

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 331 KB

english, 2007

100

XRCC1 and PCNA are loading platforms with distinct kinetic properties and different capacities to respond to multiple DNA lesions

Oliver Mortusewicz, Heinrich Leonhardt

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 725 KB

english, 2007

101

Structural and functional analysis of theEntamoeba histolytica EhrabBgene promoter

Mónica Romero-Díaz, Consuelo Gómez, Israel López-Reyes, Máximo B Martínez, Esther Orozco, Mario A Rodríguez

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.25 MB

english, 2007

102

Alternative splicing of c-fospre-mRNA: contribution of the rates of synthesis and degradation to the copy number of each transcript isoform and detection of a truncated c-Fos immunoreactive species

Juan Jurado, Carlos A Fuentes-Almagro, María J Prieto-Álamo, Carmen Pueyo

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 567 KB

english, 2007

103

Functional analysis of human mutations in homeodomain transcription factorPITX3

Satoru Sakazume, Elena Sorokina, Yoshiki Iwamoto, Elena V Semina

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.29 MB

english, 2007

104

Reciprocal regulation of p63 by C/EBP delta in human keratinocytes

Serena Borrelli, Barbara Testoni, Maurizio Callari, Daniela Alotto, Carlotta Castagnoli, Rose-Anne Romano, Satrajit Sinha, Alessandra M Viganò, Roberto Mantovani

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.51 MB

english, 2007

105

Systematic identification of non-coding RNA 2,2,7-trimethylguanosine cap structures inCaenorhabditis elegans

Dong Jia, Lun Cai, Housheng He, Geir Skogerbø, Tiantian Li, Muhammad Nauman Aftab, Runsheng Chen

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 660 KB

english, 2007

106

An unusual S-adenosylmethionine synthetase gene from dinoflagellate is methylated

Percy Ho, KF Kong, YH Chan, Jimmy SH Tsang, Joseph TY Wong

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.63 MB

english, 2007

107

Characterization of a novel bifunctional mutant of staphylokinase with platelet-targeted thrombolysis and antiplatelet aggregation activities

Hongshan Chen, Wei Mo, Huabo Su, Yanling Zhang, Houyan Song

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1018 KB

english, 2007

108

Transcriptional regulation of human eosinophil RNases by an evolutionary- conserved sequence motif in primate genome

Hsiu-Yu Wang, Hao-Teng Chang, Tun-Wen Pai, Chung-I Wu, Yuan-Hung Lee, Yen-Hsin Chang, Hsiu-Ling Tai, Chuan-Yi Tang, Wei-Yao Chou, Margaret Dah-Tsyr Chang

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 5.21 MB

english, 2007

109

Manipulation of cell cycle progression can counteract the apparent loss of correction frequency following oligonucleotide-directed gene repair

Julia U Engstrom, Eric B Kmiec

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.24 MB

english, 2007

110

ADAM15 gene structure and differential alternative exon use in human tissues

Iivari Kleino, Rebekka M Ortiz, Ari-Pekka J Huovila

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 750 KB

english, 2007

111

The use of Multiple Displacement Amplified DNA as a control for Methylation Specific PCR, Pyrosequencing, Bisulfite Sequencing and Methylation-Sensitive Restriction Enzyme PCR

Simon Hughes, J Louise Jones

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 670 KB

english, 2007

112

Hfq stimulates the activity of the CCA-adding enzyme

Marion Scheibe, Sonja Bonin, Eliane Hajnsdorf, Heike Betat, Mario Mörl

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 432 KB

english, 2007

113

Detection limits of several commercial reverse transcriptase enzymes: impact on the low- and high-abundance transcript levels assessed by quantitative RT-PCR

Jean-Philippe Levesque-Sergerie, Mathieu Duquette, Catherine Thibault, Louis Delbecchi, Nathalie Bissonnette

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 351 KB

english, 2007

114

Control ofgag-polgene expression in theCandida albicansretrotransposon Tca2

Elaine M Forbes, Siân R Nieduszynska, Fiona K Brunton, Joanne Gibson, L Anne Glover, Ian Stansfield

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 806 KB

english, 2007

115

Expression and characterization of novel ovine orthologs of bovine placental prolactin-related proteins

Koichi Ushizawa, Toru Takahashi, Misa Hosoe, Katsuhiro Ohkoshi, Kazuyoshi Hashizume

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.82 MB

english, 2007

116

Regulation of poly(ADP-ribose) polymerase-1 (PARP-1) gene expression through the post-translational modification of Sp1: a nuclear target protein of PARP-1

Karine Zaniolo, Serge Desnoyers, Steeve Leclerc, Sylvain L Guérin

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.54 MB

english, 2007

117

Extensive ssDNA end formation at DNA double-strand breaks in non-homologous end-joining deficient cells during the S phase

Karin H Karlsson, Bo Stenerlöw

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.31 MB

english, 2007

118

A versatile approach to multiple gene RNA interference using microRNA-based short hairpin RNAs

Xiaocui Zhu, Leah A Santat, Mi Sook Chang, Jamie Liu, Joelle R Zavzavadjian, Estelle A Wall, Christine Kivork, Melvin I Simon, Iain DC Fraser

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.01 MB

english, 2007

119

The Varicella-Zoster Virus Immediate-Early 63 protein affects chromatin controlled gene transcription in a cell-type dependent manner

Lionel Habran, Nadia El Mjiyad, Emmanuel Di Valentin, Catherine Sadzot-Delvaux, Sébastien Bontems, Jacques Piette

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 575 KB

english, 2007

120

In search of suitable reference genes for gene expression studies of human renal cell carcinoma by real-time PCR

Monika Jung, Azizbek Ramankulov, Jan Roigas, Manfred Johannsen, Martin Ringsdorf, Glen Kristiansen, Klaus Jung

Journal:

BMC Molecular Biology

Year:

2007

Language:

english

File:

PDF, 372 KB

english, 2007

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