Volume 16; Issue 1

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BMC Plant Biology
Volume 16; Issue 1

BMC Plant Biology

Volume 16; Issue 1

1

Cell wall proteome of sugarcane stems: comparison of a destructive and a non-destructive extraction method showed differences in glycoside hydrolases and peroxidases

Calderan-Rodrigues, Maria Juliana, Jamet, Elisabeth, Douché, Thibaut, Bonassi, Maria Beatriz Rodrigues, Cataldi, Thaís Regiani, Fonseca, Juliana Guimarães, San Clemente, Hélène, Pont-Lezica, Rafael, L

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

2

Mapping QTLs and association of differentially expressed gene transcripts for multiple agronomic traits under different nitrogen levels in sorghum

Gelli, Malleswari, Mitchell, Sharon E., Liu, Kan, Clemente, Thomas E., Weeks, Donald P., Zhang, Chi, Holding, David R., Dweikat, Ismail M.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 784 KB

english, 2016

3

Substrate thiophosphorylation by Arabidopsis mitogen-activated protein kinases

Leissing, Franz, Nomoto, Mika, Bocola, Marco, Schwaneberg, Ulrich, Tada, Yasuomi, Conrath, Uwe, Beckers, Gerold J. M.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.97 MB

english, 2016

4

Proteomics and transcriptomics analyses of Arabidopsis floral buds uncover important functions of ARABIDOPSIS SKP1-LIKE1

Lu, Dihong, Ni, Weimin, Stanley, Bruce A., Ma, Hong

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.52 MB

english, 2016

5

Lignin biosynthesis in wheat (Triticum aestivum L.): its response to waterlogging and association with hormonal levels

Nguyen, Tran-Nguyen, Son, SeungHyun, Jordan, Mark C., Levin, David B., Ayele, Belay T.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 957 KB

english, 2016

6

Photoinhibition and photoinhibition-like damage to the photosynthetic apparatus in tobacco leaves induced by pseudomonas syringae pv. Tabaci under light and dark conditions

Cheng, Dan-Dan, Zhang, Zi-Shan, Sun, Xing-Bin, Zhao, Min, Sun, Guang-Yu, Chow, Wah Soon

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 830 KB

english, 2016

7

Phytohormone balance and stress-related cellular responses are involved in the transition from bud to shoot growth in leafy spurge

Chao, Wun S., Doğramaci, Münevver, Horvath, David P., Anderson, James V., Foley, Michael E.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.77 MB

english, 2016

8

Two members of TaRLK family confer powdery mildew resistance in common wheat

Chen, Tingting, Xiao, Jin, Xu, Jun, Wan, Wentao, Qin, Bi, Cao, Aizhong, Chen, Wei, Xing, Liping, Du, Chen, Gao, Xiquan, Zhang, Shouzhong, Zhang, Ruiqi, Shen, Wenbiao, Wang, Haiyan, Wang, Xiue

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.81 MB

english, 2016

9

Integration of genetic, genomic and transcriptomic information identifies putative regulators of adventitious root formation in Populus

Ribeiro, Cintia L., Silva, Cynthia M., Drost, Derek R., Novaes, Evandro, Novaes, Carolina R. D. B., Dervinis, Christopher, Kirst, Matias

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 984 KB

english, 2016

10

Overexpression of plum auxin receptor PslTIR1 in tomato alters plant growth, fruit development and fruit shelf-life characteristics

El-Sharkawy, I., Sherif, S., El Kayal, W., Jones, B., Li, Z., Sullivan, A. J., Jayasankar, Subramanian

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.50 MB

english, 2016

11

Expression profiling of marker genes responsive to the defence-associated phytohormones salicylic acid, jasmonic acid and ethylene in Brachypodium distachyon

Kouzai, Yusuke, Kimura, Mamiko, Yamanaka, Yurie, Watanabe, Megumi, Matsui, Hidenori, Yamamoto, Mikihiro, Ichinose, Yuki, Toyoda, Kazuhiro, Onda, Yoshihiko, Mochida, Keiichi, Noutoshi, Yoshiteru

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.32 MB

english, 2016

12

PtrA/NINV, an alkaline/neutral invertase gene of Poncirus trifoliata, confers enhanced tolerance to multiple abiotic stresses by modulating ROS levels and maintaining photosynthetic efficiency

Dahro, Bachar, Wang, Fei, Peng, Ting, Liu, Ji-Hong

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.06 MB

english, 2016

13

Ploidy effect and genetic architecture exploration of stalk traits using DH and its corresponding haploid populations in maize

Meng, Yujie, Li, Junhui, Liu, Jianju, Hu, Haixiao, Li, Wei, Liu, Wenxin, Chen, Shaojiang

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.26 MB

english, 2016

14

Two highly similar DEAD box proteins, OsRH2 and OsRH34, homologous to eukaryotic initiation factor 4AIII, play roles of the exon junction complex in regulating growth and development in rice

Huang, Chun-Kai, Sie, Yi-Syuan, Chen, Yu-Fu, Huang, Tian-Sheng, Lu, Chung-An

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.36 MB

english, 2016

15

Plant hormone-mediated regulation of stress responses

Verma, Vivek, Ravindran, Pratibha, Kumar, Prakash P.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 761 KB

english, 2016

16

Interaction of plant growth regulators and reactive oxygen species to regulate petal senescence in wallflowers (Erysimum linifolium)

Salleh, Faezah Mohd, Mariotti, Lorenzo, Spadafora, Natasha D., Price, Anna M., Picciarelli, Piero, Wagstaff, Carol, Lombardi, Lara, Rogers, Hilary

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.52 MB

english, 2016

17

Transcriptomic and physiological analysis of common duckweed Lemna minor responses to NH4 + toxicity

Wang, Wenguo, Li, Rui, Zhu, Qili, Tang, Xiaoyu, Zhao, Qi

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.72 MB

english, 2016

18

Genetic origin and composition of a natural hybrid poplar Populus × jrtyschensis from two distantly related species

Jiang, Dechun, Feng, Jianju, Dong, Miao, Wu, Guili, Mao, Kangshan, Liu, Jianquan

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.15 MB

english, 2016

19

ABA-mediated responses to water deficit separate grapevine genotypes by their genetic background

Rossdeutsch, Landry, Edwards, Everard, Cookson, Sarah J., Barrieu, François, Gambetta, Gregory A., Delrot, Serge, Ollat, Nathalie

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.04 MB

english, 2016

20

Geographical distribution of genetic diversity in Secale landrace and wild accessions

Hagenblad, Jenny, Oliveira, Hugo R., Forsberg, Nils E. G., Leino, Matti W.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.48 MB

english, 2016

21

Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean

Zhou, Fulai, Guo, Yong, Qiu, Li-Juan

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.25 MB

english, 2016

22

Genome-wide analysis of Dongxiang wild rice (Oryza rufipogon Griff.) to investigate lost/acquired genes during rice domestication

Zhang, Fantao, Xu, Tao, Mao, Linyong, Yan, Shuangyong, Chen, Xiwen, Wu, Zhenfeng, Chen, Rui, Luo, Xiangdong, Xie, Jiankun, Gao, Shan

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.70 MB

english, 2016

23

Comparative expression profiling reveals a role of the root apoplast in local phosphate response

Hoehenwarter, Wolfgang, Mönchgesang, Susann, Neumann, Steffen, Majovsky, Petra, Abel, Steffen, Müller, Jens

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 4.70 MB

english, 2016

24

Genome-wide analysis identifies gain and loss/change of function within the small multigenic insecticidal Albumin 1 family of Medicago truncatula

Karaki, L., Da Silva, P., Rizk, F., Chouabe, C., Chantret, N., Eyraud, V., Gressent, F., Sivignon, C., Rahioui, I., Kahn, D., Brochier-Armanet, C., Rahbé, Y., Royer, C.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.78 MB

english, 2016

25

Overexpression of a brassinosteroid biosynthetic gene Dwarf enhances photosynthetic capacity through activation of Calvin cycle enzymes in tomato

Li, Xiao-Jing, Guo, Xie, Zhou, Yan-Hong, Shi, Kai, Zhou, Jie, Yu, Jing-Quan, Xia, Xiao-Jian

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.58 MB

english, 2016

26

On the role of ethylene, auxin and a GOLVEN-like peptide hormone in the regulation of peach ripening

Tadiello, Alice, Ziosi, Vanina, Negri, Alfredo Simone, Noferini, Massimo, Fiori, Giovanni, Busatto, Nicola, Espen, Luca, Costa, Guglielmo, Trainotti, Livio

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.55 MB

english, 2016

27

Identification of genomic sites for CRISPR/Cas9-based genome editing in the Vitis vinifera genome

Wang, Yi, Liu, Xianju, Ren, Chong, Zhong, Gan-Yuan, Yang, Long, Li, Shaohua, Liang, Zhenchang

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.69 MB

english, 2016

28

A QTL on the short arm of wheat (Triticum aestivum L.) chromosome 3B affects the stability of grain weight in plants exposed to a brief heat shock early in grain filling

Shirdelmoghanloo, Hamid, Taylor, Julian D., Lohraseb, Iman, Rabie, Huwaida, Brien, Chris, Timmins, Andy, Martin, Peter, Mather, Diane E., Emebiri, Livinus, Collins, Nicholas C.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 928 KB

english, 2016

29

Genetic diversity, linkage disequilibrium, population structure and construction of a core collection of Prunus avium L. landraces and bred cultivars

Campoy, José Antonio, Lerigoleur-Balsemin, Emilie, Christmann, Hélène, Beauvieux, Rémi, Girollet, Nabil, Quero-García, José, Dirlewanger, Elisabeth, Barreneche, Teresa

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.87 MB

english, 2016

30

Genetic manipulation of putrescine biosynthesis reprograms the cellular transcriptome and the metabolome

Page, Andrew F., Cseke, Leland J., Minocha, Rakesh, Turlapati, Swathi A., Podila, Gopi K., Ulanov, Alexander, Li, Zhong, Minocha, Subhash C.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.45 MB

english, 2016

31

Transcriptomic network analyses of leaf dehydration responses identify highly connected ABA and ethylene signaling hubs in three grapevine species differing in drought tolerance

Hopper, Daniel W., Ghan, Ryan, Schlauch, Karen A., Cramer, Grant R.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

32

Drought-responsive WRKY transcription factor genes TaWRKY1 and TaWRKY33 from wheat confer drought and/or heat resistance in Arabidopsis

He, Guan-Hua, Xu, Ji-Yuan, Wang, Yan-Xia, Liu, Jia-Ming, Li, Pan-Song, Chen, Ming, Ma, You-Zhi, Xu, Zhao-Shi

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.77 MB

english, 2016

33

Drought stress tolerance strategies revealed by RNA-Seq in two sorghum genotypes with contrasting WUE

Fracasso, Alessandra, Trindade, Luisa M., Amaducci, Stefano

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.34 MB

english, 2016

34

Comparison of statistical models for nested association mapping in rapeseed (Brassica napus L.) through computer simulations

Li, Jinquan, Bus, Anja, Spamer, Viola, Stich, Benjamin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 9.77 MB

english, 2016

35

A novel lipid transfer protein from the pea Pisum sativum: isolation, recombinant expression, solution structure, antifungal activity, lipid binding, and allergenic properties

Bogdanov, Ivan V., Shenkarev, Zakhar O., Finkina, Ekaterina I., Melnikova, Daria N., Rumynskiy, Eugene I., Arseniev, Alexander S., Ovchinnikova, Tatiana V.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.79 MB

english, 2016

36

Fine-mapping of qGW4.05, a major QTL for kernel weight and size in maize

Chen, Lin, Li, Yong-xiang, Li, Chunhui, Wu, Xun, Qin, Weiwei, Li, Xin, Jiao, Fuchao, Zhang, Xiaojing, Zhang, Dengfeng, Shi, Yunsu, Song, Yanchun, Li, Yu, Wang, Tianyu

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.38 MB

english, 2016

37

Oligogalacturonic acids promote tomato fruit ripening through the regulation of 1-aminocyclopropane-1-carboxylic acid synthesis at the transcriptional and post-translational levels

Ma, Yingxuan, Zhou, Leilei, Wang, Zhichao, Chen, Jianting, Qu, Guiqin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.67 MB

english, 2016

38

Erratum to: Association mapping of North American spring wheat breeding germplasm reveals loci conferring resistance to Ug99 and other African stem rust races

Bajgain, P., Rouse, M. N., Bulli, P., Bhavani, S., Gordon, T., Wanyera, R., Njau, P. N., Legesse, W., Anderson, J. A., Pumphrey, M. O.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 372 KB

english, 2016

39

Identification and functional analysis of the geranylgeranyl pyrophosphate synthase gene (crtE) and phytoene synthase gene (crtB) for carotenoid biosynthesis in Euglena gracilis

Kato, Shota, Takaichi, Shinichi, Ishikawa, Takahiro, Asahina, Masashi, Takahashi, Senji, Shinomura, Tomoko

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.76 MB

english, 2016

40

CENH3-GFP: a visual marker for gametophytic and somatic ploidy determination in Arabidopsis thaliana

De Storme, Nico, Keçeli, Burcu Nur, Zamariola, Linda, Angenon, Geert, Geelen, Danny

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.68 MB

english, 2016

41

Expression profiling of genes involved in drought stress and leaf senescence in juvenile barley

Wehner, Gwendolin, Balko, Christiane, Humbeck, Klaus, Zyprian, Eva, Ordon, Frank

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 676 KB

english, 2016

42

Microtubule encounter-based catastrophe in Arabidopsis cortical microtubule arrays

Chi, Zhihai, Ambrose, Chris

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.63 MB

english, 2016

43

Salicylic acid treatment and expression of an RNA-dependent RNA polymerase 1 transgene inhibit lethal symptoms and meristem invasion during tobacco mosaic virus infection in Nicotiana benthamiana

Lee, Wing-Sham, Fu, Shih-Feng, Li, Zheng, Murphy, Alex M., Dobson, Elizabeth A., Garland, Laura, Chaluvadi, Srinivasa Rao, Lewsey, Mathew G., Nelson, Richard S., Carr, John P.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.49 MB

english, 2016

44

OsHKT1;4-mediated Na+ transport in stems contributes to Na+ exclusion from leaf blades of rice at the reproductive growth stage upon salt stress

Suzuki, Kei, Yamaji, Naoki, Costa, Alex, Okuma, Eiji, Kobayashi, Natsuko I., Kashiwagi, Tatsuhiko, Katsuhara, Maki, Wang, Cun, Tanoi, Keitaro, Murata, Yoshiyuki, Schroeder, Julian I., Ma, Jian Feng, H

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.30 MB

english, 2016

45

Several wall-associated kinases participate positively and negatively in basal defense against rice blast fungus

Delteil, Amandine, Gobbato, Enrico, Cayrol, Bastien, Estevan, Joan, Michel-Romiti, Corinne, Dievart, Anne, Kroj, Thomas, Morel, J.-B.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.47 MB

english, 2016

46

A comparative gene analysis with rice identified orthologous group II HKT genes and their association with Na+ concentration in bread wheat

Ariyarathna, H. A. Chandima K., Oldach, Klaus H., Francki, Michael G.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.58 MB

english, 2016

47

Altered glycosylation of exported proteins, including surface immune receptors, compromises calcium and downstream signaling responses to microbe-associated molecular patterns in Arabidopsis thaliana

Trempel, Fabian, Kajiura, Hiroyuki, Ranf, Stefanie, Grimmer, Julia, Westphal, Lore, Zipfel, Cyril, Scheel, Dierk, Fujiyama, Kazuhito, Lee, Justin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.06 MB

english, 2016

48

Transcriptome and comparative gene expression analysis of Phyllostachys edulis in response to high light

Zhao, Hansheng, Lou, Yongfeng, Sun, Huayu, Li, Lichao, Wang, Lili, Dong, Lili, Gao, Zhimin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.73 MB

english, 2016

49

Exogenous auxin regulates multi-metabolic network and embryo development, controlling seed secondary dormancy and germination in Nicotiana tabacum L.

Li, Zhenhua, Zhang, Jie, Liu, Yiling, Zhao, Jiehong, Fu, Junjie, Ren, Xueliang, Wang, Guoying, Wang, Jianhua

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.62 MB

english, 2016

50

Identification and characterization of abundant repetitive sequences in Eragrostis tef cv. Enatite genome

Gebre, Yohannes Gedamu, Bertolini, Edoardo, Pè, Mario Enrico, Zuccolo, Andrea

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.84 MB

english, 2016

51

Transcriptomic, proteomic and metabolic changes in Arabidopsis thaliana leaves after the onset of illumination

Liang, Chao, Cheng, Shifeng, Zhang, Youjun, Sun, Yuzhe, Fernie, Alisdair R., Kang, Kang, Panagiotou, Gianni, Lo, Clive, Lim, Boon Leong

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.02 MB

english, 2016

52

Comparative fiber property and transcriptome analyses reveal key genes potentially related to high fiber strength in cotton (Gossypium hirsutum L.) line MD52ne

Islam, Md S., Fang, David D., Thyssen, Gregory N., Delhom, Chris D., Liu, Yongliang, Kim, Hee Jin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.61 MB

english, 2016

53

Gene expression profiling of the green seed problem in Soybean

Teixeira, Renake N., Ligterink, Wilco, França-Neto, José de B., Hilhorst, Henk W.M., da Silva, Edvaldo A. A.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.73 MB

english, 2016

54

Revisiting chromatin binding of the Arabidopsis UV-B photoreceptor UVR8

Binkert, Melanie, Crocco, Carlos D., Ekundayo, Babatunde, Lau, Kelvin, Raffelberg, Sarah, Tilbrook, Kimberley, Yin, Ruohe, Chappuis, Richard, Schalch, Thomas, Ulm, Roman

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.64 MB

english, 2016

55

BMC Plant Biology reviewer acknowledgement 2015

Simundza, Julia

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 337 KB

english, 2016

56

Genomic and transcriptomic comparison of nucleotide variations for insights into bruchid resistance of mungbean (Vigna radiata [L.] R. Wilczek)

Liu, Mao-Sen, Kuo, Tony Chien-Yen, Ko, Chia-Yun, Wu, Dung-Chi, Li, Kuan-Yi, Lin, Wu-Jui, Lin, Ching-Ping, Wang, Yen-Wei, Schafleitner, Roland, Lo, Hsiao-Feng, Chen, Chien-Yu, Chen, Long-Fang O.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.33 MB

english, 2016

57

Mapping and candidate gene screening of tomato Cladosporium fulvum-resistant gene Cf-19, based on high-throughput sequencing technology

Zhao, Tingting, Jiang, Jingbin, Liu, Guan, He, Shanshan, Zhang, He, Chen, Xiuling, Li, Jingfu, Xu, Xiangyang

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.67 MB

english, 2016

58

Analysis of transcripts differentially expressed between fruited and deflowered ‘Gala’ adult trees: a contribution to biennial bearing understanding in apple

Guitton, B., Kelner, J. J., Celton, J. M., Sabau, X., Renou, J. P., Chagné, D., Costes, E.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 4.95 MB

english, 2016

59

Fusarium oxysporum f.sp. radicis-lycopersici induces distinct transcriptome reprogramming in resistant and susceptible isogenic tomato lines

Manzo, Daniele, Ferriello, Francesca, Puopolo, Gerardo, Zoina, Astolfo, D’Esposito, Daniela, Tardella, Luca, Ferrarini, Alberto, Ercolano, Maria Raffaella

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.21 MB

english, 2016

60

Population genetic analysis of a medicinally significant Australian rainforest tree, Fontainea picrosperma C.T. White (Euphorbiaceae): biogeographic patterns and implications for species domestication and plantation establishment

Lamont, R. W., Conroy, G. C., Reddell, P., Ogbourne, S. M.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.77 MB

english, 2016

61

Exogenous proteinogenic amino acids induce systemic resistance in rice

Kadotani, Naoki, Akagi, Aya, Takatsuji, Hiroshi, Miwa, Tetsuya, Igarashi, Daisuke

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.81 MB

english, 2016

62

Genetic diversity, linkage disequilibrium and power of a large grapevine (Vitis vinifera L) diversity panel newly designed for association studies

Nicolas, Stéphane D., Péros, Jean-Pierre, Lacombe, Thierry, Launay, Amandine, Le Paslier, Marie-Christine, Bérard, Aurélie, Mangin, Brigitte, Valière, Sophie, Martins, Frédéric, Le Cunff, Loïc, Laucou

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.59 MB

english, 2016

63

Live-cell fluorescence imaging to investigate the dynamics of plant cell death during infection by the rice blast fungus Magnaporthe oryzae

Jones, Kiersun, Kim, Dong Won, Park, Jean S., Khang, Chang Hyun

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.09 MB

english, 2016

64

Glycerolipidome responses to freezing- and chilling-induced injuries: examples in Arabidopsis and rice

Zheng, Guowei, Li, Lixia, Li, Weiqi

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.06 MB

english, 2016

65

Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus

Wang, Xiaodong, Chen, Li, Wang, Aina, Wang, Hao, Tian, Jianhua, Zhao, Xiaoping, Chao, Hongbo, Zhao, Yajun, Zhao, Weiguo, Xiang, Jun, Gan, Jianping, Li, Maoteng

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.05 MB

english, 2016

66

Evaluation of the significance of cell wall polymers in flax infected with a pathogenic strain of Fusarium oxysporum

Wojtasik, Wioleta, Kulma, Anna, Dymińska, Lucyna, Hanuza, Jerzy, Czemplik, Magdalena, Szopa, Jan

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.90 MB

english, 2016

67

Abscisic acid transcriptomic signaling varies with grapevine organ

Rattanakon, Supakan, Ghan, Ryan, Gambetta, Gregory A., Deluc, Laurent G., Schlauch, Karen A., Cramer, Grant R.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.59 MB

english, 2016

68

Contrasting transcriptional responses of PYR1/PYL/RCAR ABA receptors to ABA or dehydration stress between maize seedling leaves and roots

Fan, Wenqiang, Zhao, Mengyao, Li, Suxin, Bai, Xue, Li, Jia, Meng, Haowei, Mu, Zixin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.20 MB

english, 2016

69

Genome-wide identification and expression analysis of the ClTCP transcription factors in Citrullus lanatus

Shi, Pibiao, Guy, Kateta Malangisha, Wu, Weifang, Fang, Bingsheng, Yang, Jinghua, Zhang, Mingfang, Hu, Zhongyuan

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.74 MB

english, 2016

70

Identification of miRNAs and their targets through high-throughput sequencing and degradome analysis in male and female Asparagus officinalis

Chen, Jingli, Zheng, Yi, Qin, Li, Wang, Yan, Chen, Lifei, He, Yanjun, Fei, Zhangjun, Lu, Gang

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.28 MB

english, 2016

71

B chromosome contains active genes and impacts the transcription of A chromosomes in maize (Zea mays L.)

Huang, Wei, Du, Yan, Zhao, Xin, Jin, Weiwei

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.43 MB

english, 2016

72

SNP-based analysis of genetic diversity reveals important alleles associated with seed size in rice

Tang, Weijie, Wu, Tingting, Ye, Jian, Sun, Juan, Jiang, Yue, Yu, Jun, Tang, Jianpeng, Chen, Gaoming, Wang, Chunming, Wan, Jianmin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.89 MB

english, 2016

73

Variation in tissue Na+ content and the activity of SOS1 genes among two species and two related genera of Chrysanthemum

Gao, Jiaojiao, Sun, Jing, Cao, Peipei, Ren, Liping, Liu, Chen, Chen, Sumei, Chen, Fadi, Jiang, Jiafu

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.01 MB

english, 2016

74

Long-term balancing selection at the Phosphorus Starvation Tolerance 1 (PSTOL1) locus in wild, domesticated and weedy rice (Oryza)

Vigueira, Cynthia C., Small, Linda L., Olsen, Kenneth M.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.08 MB

english, 2016

75

Carotenoid metabolism during bilberry (Vaccinium myrtillus L.) fruit development under different light conditions is regulated by biosynthesis and degradation

Karppinen, Katja, Zoratti, Laura, Sarala, Marian, Carvalho, Elisabete, Hirsimäki, Jenni, Mentula, Helmi, Martens, Stefan, Häggman, Hely, Jaakola, Laura

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.46 MB

english, 2016

76

Transcriptome profiling of grapevine seedless segregants during berry development reveals candidate genes associated with berry weight

Muñoz-Espinoza, Claudia, Di Genova, Alex, Correa, José, Silva, Romina, Maass, Alejandro, González-Agüero, Mauricio, Orellana, Ariel, Hinrichsen, Patricio

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.98 MB

english, 2016

77

Tolerance of citrus plants to the combination of high temperatures and drought is associated to the increase in transpiration modulated by a reduction in abscisic acid levels

Zandalinas, Sara I., Rivero, Rosa M., Martínez, Vicente, Gómez-Cadenas, Aurelio, Arbona, Vicent

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.67 MB

english, 2016

78

Functional conservation and divergence of Miscanthus lutarioriparius GT43 gene family in xylan biosynthesis

Wang, Xiaoyu, Tang, Qi, Zhao, Xun, Jia, Chunlin, Yang, Xuanwen, He, Guo, Wu, Aimin, Kong, Yingzhen, Hu, Ruibo, Zhou, Gongke

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 6.60 MB

english, 2016

79

Single-cell-type quantitative proteomic and ionomic analysis of epidermal bladder cells from the halophyte model plant Mesembryanthemum crystallinum to identify salt-responsive proteins

Barkla, Bronwyn J., Vera-Estrella, Rosario, Raymond, Carolyn

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.61 MB

english, 2016

80

Rol genes enhance the biosynthesis of antioxidants in Artemisia carvifolia Buch

Dilshad, Erum, Ismail, Hammad, Haq, Ihsan-ul-, Cusido, Rosa Maria, Palazon, Javier, Ramirez-Estrada, Karla, Mirza, Bushra

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.28 MB

english, 2016

81

Construction of a high-density genetic map by specific locus amplified fragment sequencing (SLAF-seq) and its application to Quantitative Trait Loci (QTL) analysis for boll weight in upland cotton (Gossypium hirsutum.)

Zhang, Zhen, Shang, Haihong, Shi, Yuzhen, Huang, Long, Li, Junwen, Ge, Qun, Gong, Juwu, Liu, Aiying, Chen, Tingting, Wang, Dan, Wang, Yanling, Palanga, Koffi Kibalou, Muhammad, Jamshed, Li, Weijie, Lu

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.89 MB

english, 2016

82

Effect of atmospheric carbon dioxide levels and nitrate fertilization on glucosinolate biosynthesis in mechanically damaged Arabidopsis plants

Paudel, Jamuna Risal, Amirizian, Alexandre, Krosse, Sebastian, Giddings, Jessica, Ismail, Shoieb Akaram Arief, Xia, Jianguo, Gloer, James B., van Dam, Nicole M., Bede, Jacqueline C.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.52 MB

english, 2016

83

Genome-wide analysis and expression profiling of glyoxalase gene families in soybean (Glycine max) indicate their development and abiotic stress specific response

Ghosh, Ajit, Islam, Tahmina

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.70 MB

english, 2016

84

Reduced expression of AtNUP62 nucleoporin gene affects auxin response in Arabidopsis

Boeglin, Martin, Fuglsang, Anja Thoe, Luu, Doan-Trung, Sentenac, Hervé, Gaillard, Isabelle, Chérel, Isabelle

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.93 MB

english, 2016

85

WUSCHEL-RELATED HOMEOBOX 2 is important for protoderm and suspensor development in the gymnosperm Norway spruce

Zhu, Tianqing, Moschou, Panagiotis N., Alvarez, José M., Sohlberg, Joel J., von Arnold, Sara

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.40 MB

english, 2016

86

NBS-LRR-mediated resistance triggered by aphids: viruses do not adapt; aphids adapt via different mechanisms

Boissot, Nathalie, Thomas, Sophie, Chovelon, Véronique, Lecoq, Hervé

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.29 MB

english, 2016

87

Functional and evolutionary analyses of the miR156 and miR529 families in land plants

Morea, Edna Gicela Ortiz, da Silva, Eder Marques, e Silva, Geraldo Felipe Ferreira, Valente, Guilherme Targino, Barrera Rojas, Carlos Hernan, Vincentz, Michel, Nogueira, Fabio Tebaldi Siveira

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 953 KB

english, 2016

88

Is protection against florivory consistent with the optimal defense hypothesis?

Godschalx, Adrienne L., Stady, Lauren, Watzig, Benjamin, Ballhorn, Daniel J.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1007 KB

english, 2016

89

Shared and divergent pathways for flower abscission are triggered by gibberellic acid and carbon starvation in seedless Vitis vinifera L

Domingos, Sara, Fino, Joana, Cardoso, Vânia, Sánchez, Claudia, Ramalho, José C., Larcher, Roberto, Paulo, Octávio S., Oliveira, Cristina M., Goulao, Luis F.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.15 MB

english, 2016

90

Overexpression of Vitreoscilla hemoglobin increases waterlogging tolerance in Arabidopsis and maize

Du, Hewei, Shen, Xiaomeng, Huang, Yiqin, Huang, Min, Zhang, Zuxin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.98 MB

english, 2016

91

Molecular and cellular characteristics of hybrid vigour in a commercial hybrid of Chinese cabbage

Saeki, Natsumi, Kawanabe, Takahiro, Ying, Hua, Shimizu, Motoki, Kojima, Mikiko, Abe, Hiroshi, Okazaki, Keiichi, Kaji, Makoto, Taylor, Jennifer M., Sakakibara, Hitoshi, Peacock, W. James, Dennis, Eliza

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.31 MB

english, 2016

92

Genome-wide association mapping for root traits in a panel of rice accessions from Vietnam

Phung, Nhung Thi Phuong, Mai, Chung Duc, Hoang, Giang Thi, Truong, Hue Thi Minh, Lavarenne, Jeremy, Gonin, Mathieu, Nguyen, Khanh Le, Ha, Thuy Thi, Do, Vinh Nang, Gantet, Pascal, Courtois, Brigitte

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.52 MB

english, 2016

93

Comparative characterization of two GDP-mannose dehydrogenase genes from Saccharina japonica (Laminariales, Phaeophyceae)

Zhang, Pengyan, Shao, Zhanru, Jin, Weihua, Duan, Delin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.95 MB

english, 2016

94

A proteome analysis of freezing tolerance in red clover (Trifolium pratense L.)

Bertrand, Annick, Bipfubusa, Marie, Castonguay, Yves, Rocher, Solen, Szopinska-Morawska, Aleksandra, Papadopoulos, Yousef, Renaut, Jenny

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

95

microRNA-dependent gene regulatory networks in maize leaf senescence

Wu, Xiangyuan, Ding, Dong, Shi, Chaonan, Xue, Yadong, Zhang, Zhanhui, Tang, Guiliang, Tang, Jihua

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.19 MB

english, 2016

96

De novo transcriptome sequencing and gene expression analysis reveal potential mechanisms of seed abortion in dove tree (Davidia involucrata Baill.)

Li, Meng, Dong, Xujie, Peng, Jiqing, Xu, Wen, Ren, Rui, Liu, Jane, Cao, Fuxiang, Liu, Zhiming

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.01 MB

english, 2016

97

Identification of candidate genes for drought tolerance in coffee by high-throughput sequencing in the shoot apex of different Coffea arabica cultivars

Mofatto, Luciana Souto, Carneiro, Fernanda de Araújo, Vieira, Natalia Gomes, Duarte, Karoline Estefani, Vidal, Ramon Oliveira, Alekcevetch, Jean Carlos, Cotta, Michelle Guitton, Verdeil, Jean-Luc, Lap

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.69 MB

english, 2016

98

Analysis of wheat microspore embryogenesis induction by transcriptome and small RNA sequencing using the highly responsive cultivar “Svilena”

Seifert, Felix, Bössow, Sandra, Kumlehn, Jochen, Gnad, Heike, Scholten, Stefan

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.83 MB

english, 2016

99

Examining the transcriptional response of overexpressing anthranilate synthase in the hairy roots of an important medicinal plant Catharanthus roseus by RNA-seq

Sun, Jiayi, Manmathan, Harish, Sun, Cheng, Peebles, Christie A. M.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.99 MB

english, 2016

100

Hairy Canola (Brasssica napus) re-visited: Down-regulating TTG1 in an AtGL3-enhanced hairy leaf background improves growth, leaf trichome coverage, and metabolite gene expression diversity

Alahakoon, Ushan I., Taheri, Ali, Nayidu, Naghabushana K., Epp, Delwin, Yu, Min, Parkin, Isobel, Hegedus, Dwayne, Bonham-Smith, Peta, Gruber, Margaret Y.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 4.05 MB

english, 2016

101

A recessive allele for delayed flowering at the soybean maturity locus E9 is a leaky allele of FT2a, a FLOWERING LOCUS T ortholog

Zhao, Chen, Takeshima, Ryoma, Zhu, Jianghui, Xu, Meilan, Sato, Masako, Watanabe, Satoshi, Kanazawa, Akira, Liu, Baohui, Kong, Fanjiang, Yamada, Tetsuya, Abe, Jun

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.38 MB

english, 2016

102

Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

Wang, Houmiao, Lei, Yong, Wan, Liyun, Yan, Liying, Lv, Jianwei, Dai, Xiaofeng, Ren, Xiaoping, Guo, Wei, Jiang, Huifang, Liao, Boshou

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.25 MB

english, 2016

103

Erratum to: A qRT-PCR assay for the expression of all Mal d 1 isoallergen genes

Pagliarani, Giulia, Paris, Roberta, Arens, Paul, Tartarini, Stefano, Ricci, Giampaolo, Smulders, Marinus J. M., Van De Weg, Eric W.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 336 KB

english, 2016

104

A DUF-246 family glycosyltransferase-like gene affects male fertility and the biosynthesis of pectic arabinogalactans

Stonebloom, Solomon, Ebert, Berit, Xiong, Guangyan, Pattathil, Sivakumar, Birdseye, Devon, Lao, Jeemeng, Pauly, Markus, Hahn, Michael G., Heazlewood, Joshua L., Scheller, Henrik Vibe

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.75 MB

english, 2016

105

A putative pyruvate transporter TaBASS2 positively regulates salinity tolerance in wheat via modulation of ABI4 expression

Zhao, Yang, Ai, Xinghui, Wang, Mengcheng, Xiao, Langtao, Xia, Guangmin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.43 MB

english, 2016

106

Salinity stress induces the production of 2-(2-phenylethyl)chromones and regulates novel classes of responsive genes involved in signal transduction in Aquilaria sinensis calli

Wang, Xiaohui, Gao, Bowen, Liu, Xiao, Dong, Xianjuan, Zhang, Zhongxiu, Fan, Huiyan, Zhang, Le, Wang, Juan, Shi, Shepo, Tu, Pengfei

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.73 MB

english, 2016

107

Phosphatase ABI1 and okadaic acid-sensitive phosphoprotein phosphatases inhibit salt stress-activated SnRK2.4 kinase

Krzywińska, Ewa, Bucholc, Maria, Kulik, Anna, Ciesielski, Arkadiusz, Lichocka, Małgorzata, Dębski, Janusz, Ludwików, Agnieszka, Dadlez, Michał, Rodriguez, Pedro L., Dobrowolska, Grażyna

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.55 MB

english, 2016

108

Natural variation in expression of genes associated with carotenoid biosynthesis and accumulation in cassava (Manihot esculenta Crantz) storage root

Carvalho, Luiz JCB, Agustini, Marco AV, Anderson, James V, Vieira, Eduardo A, de Souza, Claudia RB, Chen, Songbi, Schaal, Barbara A, Silva, Joseane P

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.21 MB

english, 2016

109

Analysis of the genetic diversity and structure across a wide range of germplasm reveals prominent gene flow in apple at the European level

Urrestarazu, Jorge, Denancé, Caroline, Ravon, Elisa, Guyader, Arnaud, Guisnel, Rémi, Feugey, Laurence, Poncet, Charles, Lateur, Marc, Houben, Patrick, Ordidge, Matthew, Fernandez-Fernandez, Felicidad,

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.53 MB

english, 2016

110

Interdependency of Reactive Oxygen Species generating and scavenging system in salt sensitive and salt tolerant cultivars of rice

Kaur, Navdeep, Dhawan, Manish, Sharma, Isha, Pati, Pratap Kumar

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.18 MB

english, 2016

111

Genetic association of stomatal traits and yield in wheat grown in low rainfall environments

Shahinnia, Fahimeh, Le Roy, Julien, Laborde, Benjamin, Sznajder, Beata, Kalambettu, Priyanka, Mahjourimajd, Saba, Tilbrook, Joanne, Fleury, Delphine

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.85 MB

english, 2016

112

Overexpression of MfPIP2-7 from Medicago falcata promotes cold tolerance and growth under NO3 − deficiency in transgenic tobacco plants

Zhuo, Chunliu, Wang, Ting, Guo, Zhenfei, Lu, Shaoyun

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.04 MB

english, 2016

113

Comparative proteomic analysis provides novel insight into the interaction between resistant vs susceptible tomato cultivars and TYLCV infection

Huang, Ying, Ma, Hong-Yu, Huang, Wei, Wang, Feng, Xu, Zhi-Sheng, Xiong, Ai-Sheng

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.94 MB

english, 2016

114

The sucrose non-fermenting 1-related kinase 2 gene SAPK9 improves drought tolerance and grain yield in rice by modulating cellular osmotic potential, stomatal closure and stress-responsive gene expression

Dey, Avishek, Samanta, Milan Kumar, Gayen, Srimonta, Maiti, Mrinal K.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 4.79 MB

english, 2016

115

Dissecting maize diversity in lowland South America: genetic structure and geographic distribution models

Bracco, Mariana, Cascales, Jimena, Hernández, Julián Cámara, Poggio, Lidia, Gottlieb, Alexandra M., Lia, Verónica V.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.75 MB

english, 2016

116

Cold regulation of plastid ascorbate peroxidases serves as a priming hub controlling ROS signaling in Arabidopsis thaliana

van Buer, Jörn, Cvetkovic, Jelena, Baier, Margarete

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.72 MB

english, 2016

117

Molecular cloning and characterization of a flavonoid-O-methyltransferase with broad substrate specificity and regioselectivity from Citrus depressa

Itoh, Nobuya, Iwata, Chisa, Toda, Hiroshi

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.96 MB

english, 2016

118

Comparative proteomics illustrates the complexity of drought resistance mechanisms in two wheat (Triticum aestivum L.) cultivars under dehydration and rehydration

Cheng, Lixiang, Wang, Yuping, He, Qiang, Li, Huijun, Zhang, Xiaojing, Zhang, Feng

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.01 MB

english, 2016

119

Molecular characterization of flavanone 3-hydroxylase gene and flavonoid accumulation in two chemotyped safflower lines in response to methyl jasmonate stimulation

Tu, YanHua, Liu, Fei, Guo, DanDan, Fan, LiJiao, Zhu, ZhenXian, Xue, YingRu, Gao, Yue, Guo, MeiLi

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.40 MB

english, 2016

120

Comparative transcript profiling of alloplasmic male-sterile lines revealed altered gene expression related to pollen development in rice (Oryza sativa L.)

Hu, Jihong, Chen, Guanglong, Zhang, Hongyuan, Qian, Qian, Ding, Yi

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.70 MB

english, 2016

121

High-throughput development of simple sequence repeat markers for genetic diversity research in Crambe abyssinica

Qi, Weicong, Lin, Feng, Liu, Yuhe, Huang, Bangquan, Cheng, Jihua, Zhang, Wei, Zhao, Han

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.29 MB

english, 2016

122

Comprehensive analysis and discovery of drought-related NAC transcription factors in common bean

Wu, Jing, Wang, Lanfen, Wang, Shumin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.12 MB

english, 2016

123

Physiological and comparative proteome analyses reveal low-phosphate tolerance and enhanced photosynthesis in a maize mutant owing to reinforced inorganic phosphate recycling

Zhang, Kewei, Liu, Hanhan, Song, Jiuling, Wu, Wei, Li, Kunpeng, Zhang, Juren

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.21 MB

english, 2016

124

SNP-markers in Allium species to facilitate introgression breeding in onion

Scholten, Olga E., van Kaauwen, Martijn P.W., Shahin, Arwa, Hendrickx, Patrick M., Keizer, L.C. Paul, Burger, Karin, van Heusden, Adriaan W., van der Linden, C. Gerard, Vosman, Ben

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 690 KB

english, 2016

125

Temperature desynchronizes sugar and organic acid metabolism in ripening grapevine fruits and remodels their transcriptome

Rienth, Markus, Torregrosa, Laurent, Sarah, Gautier, Ardisson, Morgane, Brillouet, Jean-Marc, Romieu, Charles

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.62 MB

english, 2016

126

Insight into the AP2/ERF transcription factor superfamily in sesame and expression profiling of DREB subfamily under drought stress

Dossa, Komivi, Wei, Xin, Li, Donghua, Fonceka, Daniel, Zhang, Yanxin, Wang, Linhai, Yu, Jingyin, Boshou, Liao, Diouf, Diaga, Cissé, Ndiaga, Zhang, Xiurong

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.67 MB

english, 2016

127

Association mapping for cold tolerance in two large maize inbred panels

Revilla, Pedro, Rodríguez, Víctor Manuel, Ordás, Amando, Rincent, Renaud, Charcosset, Alain, Giauffret, Catherine, Melchinger, Albrecht E., Schön, Chris-Carolin, Bauer, Eva, Altmann, Thomas, Brunel, D

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.55 MB

english, 2016

128

Proteomic analysis highlights the role of detoxification pathways in increased tolerance to Huanglongbing disease

Martinelli, Federico, Reagan, Russell L., Dolan, David, Fileccia, Veronica, Dandekar, Abhaya M.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.96 MB

english, 2016

129

Biochemical and transcriptomic analyses reveal different metabolite biosynthesis profiles among three color and developmental stages in ‘Anji Baicha’ (Camellia sinensis)

Li, Chun-Fang, Xu, Yan-Xia, Ma, Jian-Qiang, Jin, Ji-Qiang, Huang, Dan-Juan, Yao, Ming-Zhe, Ma, Chun-Lei, Chen, Liang

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.06 MB

english, 2016

130

The similar and different evolutionary trends of MATE family occurred between rice andArabidopsis thaliana

Wang, Lihui, Bei, Xiujuan, Gao, Jiansheng, Li, Yaxuan, Yan, Yueming, Hu, Yingkao

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.76 MB

english, 2016

131

Genome-wide identification of microRNAs in pomegranate (Punica granatum L.) by high-throughput sequencing

Saminathan, Thangasamy, Bodunrin, Abiodun, Singh, Nripendra V., Devarajan, Ramajayam, Nimmakayala, Padma, Jeff, Moersfelder, Aradhya, Mallikarjuna, Reddy, Umesh K.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.53 MB

english, 2016

132

Phosphate uptake kinetics and tissue-specific transporter expression profiles in poplar (Populus × canescens) at different phosphorus availabilities

Kavka, Mareike, Polle, Andrea

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.30 MB

english, 2016

133

Markers associated with heading and aftermath heading in perennial ryegrass full-sib families

Arojju, Sai Krishna, Barth, Susanne, Milbourne, Dan, Conaghan, Patrick, Velmurugan, Janaki, Hodkinson, Trevor R., Byrne, Stephen L.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.94 MB

english, 2016

134

Iron homeostasis inArabidopsis thaliana: transcriptomic analyses reveal novel FIT-regulated genes, iron deficiency marker genes and functional gene networks

Mai, Hans-Jörg, Pateyron, Stéphanie, Bauer, Petra

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 4.63 MB

english, 2016

135

Characterization of eleven monosomic alien addition lines added fromGossypium anomalumtoGossypium hirsutumusing improved GISH and SSR markers

Wang, Xiaoxiao, Wang, Yingying, Wang, Chen, Chen, Yu, Chen, Yu, Feng, Shouli, Zhao, Ting, Zhou, Baoliang

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.39 MB

english, 2016

136

A fast and simple LC-MS-based characterization of the flavonoid biosynthesis pathway for few seed(ling)s

Jaegle, Benjamin, Uroic, Miran Kalle, Holtkotte, Xu, Lucas, Christina, Termath, Andreas Ole, Schmalz, Hans-Günther, Bucher, Marcel, Hoecker, Ute, Hülskamp, Martin, Schrader, Andrea

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.35 MB

english, 2016

137

Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize

Du, Qingguo, Wang, Kai, Xu, Cheng, Zou, Cheng, Xie, Chuanxiao, Xu, Yunbi, Li, Wen-Xue

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.03 MB

english, 2016

138

Insights into the adaptive response ofArabidopsis thalianato prolonged thermal stress by ribosomal profiling and RNA-Seq

Lukoszek, Radoslaw, Feist, Peter, Ignatova, Zoya

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.75 MB

english, 2016

139

A new genomic library of melon introgression lines in a cantaloupe genetic background for dissecting desirable agronomical traits

Perpiñá, Gorka, Esteras, Cristina, Gibon, Yves, Monforte, Antonio J., Picó, Belén

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 4.73 MB

english, 2016

140

Transcriptomic comparison between twoVitis viniferaL. varieties (Trincadeira and Touriga Nacional) in abiotic stress conditions

Rocheta, Margarida, Coito, João L., Ramos, Miguel J. N., Carvalho, Luísa, Becker, Jörg D., Carbonell-Bejerano, Pablo, Amâncio, Sara

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.13 MB

english, 2016

141

Identification of two novel powdery mildew resistance loci, Ren6 and Ren7, from the wild Chinese grape species Vitis piasezkii

Pap, Dániel, Riaz, Summaira, Dry, Ian B., Jermakow, Angelica, Tenscher, Alan C., Cantu, Dario, Oláh, Róbert, Walker, M. Andrew

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.81 MB

english, 2016

142

Ethylene responsive transcription factor ERF109 retards PCD and improves salt tolerance in plant

Bahieldin, Ahmed, Atef, Ahmed, Edris, Sherif, Gadalla, Nour O., Ali, Hani M., Hassan, Sabah M., Al-Kordy, Magdy A., Ramadan, Ahmed M., Makki, Rania M., Al-Hajar, Abdulrahman S. M., El-Domyati, Fotouh

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 862 KB

english, 2016

143

Cell wall dynamics during apple development and storage involves hemicellulose modifications and related expressed genes

Dheilly, Emmanuelle, Gall, Sophie Le, Guillou, Marie-Charlotte, Renou, Jean-Pierre, Bonnin, Estelle, Orsel, Mathilde, Lahaye, Marc

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.03 MB

english, 2016

144

Flavonoids and darkness lower PCD in senescingVitis viniferasuspension cell cultures

Bertolini, Alberto, Petrussa, Elisa, Patui, Sonia, Zancani, Marco, Peresson, Carlo, Casolo, Valentino, Vianello, Angelo, Braidot, Enrico

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.58 MB

english, 2016

145

Development of EMS-induced mutation population for amylose and resistant starch variation in bread wheat (Triticum aestivum) and identification of candidate genes responsible for amylose variation

Mishra, Ankita, Singh, Anuradha, Sharma, Monica, Kumar, Pankaj, Roy, Joy

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.27 MB

english, 2016

146

CYP79D enzymes contribute to jasmonic acid-induced formation of aldoximes and other nitrogenous volatiles in twoErythroxylumspecies

Luck, Katrin, Jirschitzka, Jan, Irmisch, Sandra, Huber, Meret, Gershenzon, Jonathan, Köllner, Tobias G.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.39 MB

english, 2016

147

Overlapping toxic effect of long term thallium exposure on white mustard (Sinapis alba L.) photosynthetic activity

Mazur, Radosław, Sadowska, Monika, Kowalewska, Łucja, Abratowska, Agnieszka, Kalaji, Hazem M., Mostowska, Agnieszka, Garstka, Maciej, Krasnodębska-Ostręga, Beata

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.58 MB

english, 2016

148

LATE ELONGATED HYPOCOTYL regulates photoperiodic flowering via the circadian clock in Arabidopsis

Park, Mi-Jeong, Kwon, Young-Ju, Gil, Kyung-Eun, Park, Chung-Mo

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.89 MB

english, 2016

149

Ubiquitous miR159 repression of MYB33/65 in Arabidopsis rosettes is robust and is not perturbed by a wide range of stresses

Li, Yanjiao, Alonso-Peral, Maria, Wong, Gigi, Wang, Ming-Bo, Millar, Anthony A

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.11 MB

english, 2016

150

Identification of candidate genes related to calanolide biosynthesis by transcriptome sequencing of Calophyllum brasiliense (Calophyllaceae)

Gómez-Robledo, Hilda-Beatriz, Cruz-Sosa, Francisco, Bernabé-Antonio, Antonio, Guerrero-Analco, Antonio, Olivares-Romero, José Luis, Alonso-Sánchez, Alexandro, Villafán, Emanuel, Ibarra-Laclette, Enriq

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.08 MB

english, 2016

151

Transcriptome responses of an ungrafted Phytophthora root rot tolerant avocado (Persea americana) rootstock to flooding andPhytophthora cinnamomi

Reeksting, B. J., Olivier, N. A., van den Berg, N.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.94 MB

english, 2016

152

Maize plants can enter a standby mode to cope with chilling stress

Riva-Roveda, Laëtitia, Escale, Brigitte, Giauffret, Catherine, Périlleux, Claire

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.01 MB

english, 2016

153

Calcium/calmodulin alleviates substrate inhibition in a strawberry UDP-glucosyltransferase involved in fruit anthocyanin biosynthesis

Peng, Hui, Yang, Tianbao, Whitaker, Bruce D., Shangguan, Lingfei, Fang, Jinggui

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.26 MB

english, 2016

154

Rice NAC transcription factor ONAC095 plays opposite roles in drought and cold stress tolerance

Huang, Lei, Hong, Yongbo, Zhang, Huijuan, Li, Dayong, Song, Fengming

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.06 MB

english, 2016

155

Quantitative modelling of legume root nodule primordium induction by a diffusive signal of epidermal origin that inhibits auxin efflux

Deinum, Eva E., Kohlen, Wouter, Geurts, René

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.93 MB

english, 2016

156

OsACOS12, an orthologue of Arabidopsis acyl-CoA synthetase5, plays an important role in pollen exine formation and anther development in rice

Li, Yueling, Li, Dandan, Guo, Zongli, Shi, Qiangsheng, Xiong, Shuangxi, Zhang, Cheng, Zhu, Jun, Yang, Zhongnan

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.11 MB

english, 2016

157

Proteomics analysis reveals novel host molecular mechanisms associated with thermotherapy of ‘Ca.Liberibacter asiaticus’-infected citrus plants

Nwugo, Chika C., Doud, Melissa S., Duan, Yong-ping, Lin, Hong

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.01 MB

english, 2016

158

Drought stress in maize causes differential acclimation responses of glutathione and sulfur metabolism in leaves and roots

Ahmad, Nisar, Malagoli, Mario, Wirtz, Markus, Hell, Ruediger

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.56 MB

english, 2016

159

Proteomic analysis of maize grain development using iTRAQ reveals temporal programs of diverse metabolic processes

Yu, Tao, Li, Geng, Dong, Shuting, Liu, Peng, Zhang, Jiwang, Zhao, Bin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.40 MB

english, 2016

160

Multi-environment QTL studies suggest a role for cysteine-rich protein kinase genes in quantitative resistance to blackleg disease in Brassica napus

Larkan, Nicholas J., Raman, Harsh, Lydiate, Derek J., Robinson, Stephen J., Yu, Fengqun, Barbulescu, Denise M., Raman, Rosy, Luckett, David J., Burton, Wayne, Wratten, Neil, Salisbury, Philip A., Rimm

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.52 MB

english, 2016

161

Combined transcriptome and metabolome analyses to understand the dynamic responses of rice plants to attack by the rice stem borerChilo suppressalis(Lepidoptera: Crambidae)

Liu, Qingsong, Wang, Xingyun, Tzin, Vered, Romeis, Jörg, Peng, Yufa, Li, Yunhe

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.81 MB

english, 2016

162

Enhanced metabolic process to indole alkaloids inClematis ternifloraDC. after exposure to high level of UV-B irradiation followed by the dark

Gao, Cuixia, Yang, Bingxian, Zhang, Dandan, Chen, Meng, Tian, Jingkui

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.36 MB

english, 2016

163

Vine nitrogen status and volatile thiols and their precursors from plot to transcriptome level

Helwi, Pierre, Guillaumie, Sabine, Thibon, Cécile, Keime, Céline, Habran, Aude, Hilbert, Ghislaine, Gomes, Eric, Darriet, Philippe, Delrot, Serge, van Leeuwen, Cornelis

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.94 MB

english, 2016

164

Direct imaging of glycans in Arabidopsis roots via click labeling of metabolically incorporated azido-monosaccharides

Hoogenboom, Jorin, Berghuis, Nathalja, Cramer, Dario, Geurts, Rene, Zuilhof, Han, Wennekes, Tom

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.91 MB

english, 2016

165

Ectopically expressed glutaredoxin ROXY19 negatively regulates the detoxification pathway inArabidopsis thaliana

Huang, Li-Jun, Li, Ning, Thurow, Corinna, Wirtz, Markus, Hell, Rüdiger, Gatz, Christiane

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.38 MB

english, 2016

166

Characterization of the cytokinin-responsive transcriptome in rice

Raines, Tracy, Blakley, Ivory C., Tsai, Yu-Chang, Worthen, Jennifer M., Franco-Zorrilla, José Manuel, Solano, Roberto, Schaller, G. Eric, Loraine, Ann E., Kieber, Joseph J.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.86 MB

english, 2016

167

Shifts in plant foliar and floral metabolomes in response to the suppression of the associated microbiota

Gargallo-Garriga, Albert, Sardans, Jordi, Pérez-Trujillo, Míriam, Guenther, Alex, Llusià, Joan, Rico, Laura, Terradas, Jaume, Farré-Armengol, Gerard, Filella, Iolanda, Parella, Teodor, Peñuelas, Josep

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.08 MB

english, 2016

168

Development of high-lysine rice via endosperm-specific expression of a foreign LYSINE RICH PROTEIN gene

Liu, Xin, Zhang, Cuicui, Wang, Xiurong, Liu, Qiaoquan, Yuan, Dingyang, Pan, Gang, Sun, Samuel S. M., Tu, Jumin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.99 MB

english, 2016

169

Distinct expression and function of carotenoid metabolic genes and homoeologs in developing wheat grains

Qin, Xiaoqiong, Fischer, Kathryn, Yu, Shu, Dubcovsky, Jorge, Tian, Li

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.38 MB

english, 2016

170

Abundant RNA editing sites of chloroplast protein-coding genes inGinkgo bilobaand an evolutionary pattern analysis

He, Peng, Huang, Sheng, Xiao, Guanghui, Zhang, Yuzhou, Yu, Jianing

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.49 MB

english, 2016

171

Bioinformatic Identification and Analysis of Hydroxyproline-Rich Glycoproteins inPopulus trichocarpa

Showalter, Allan M., Keppler, Brian D., Liu, Xiao, Lichtenberg, Jens, Welch, Lonnie R.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.54 MB

english, 2016

172

DAMPs, MAMPs, and NAMPs in plant innate immunity

Choi, Hyong Woo, Klessig, Daniel F.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 456 KB

english, 2016

173

Identification by the DArTseq method of the genetic origin of theCoffea canephoracultivated in Vietnam and Mexico

Garavito, Andrea, Montagnon, Christophe, Guyot, Romain, Bertrand, Benoît

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.15 MB

english, 2016

174

Genetic analysis of phytoene synthase 1 (Psy1) gene function and regulation in common wheat

Zhai, Shengnan, Li, Genying, Sun, Youwei, Song, Jianmin, Li, Jihu, Song, Guoqi, Li, Yulian, Ling, Hongqing, He, Zhonghu, Xia, Xianchun

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.80 MB

english, 2016

175

Comparative proteomic analysis reveals alterations in development and photosynthesis-related proteins in diploid and triploid rice

Wang, Shuzhen, Chen, Wenyue, Yang, Changdeng, Yao, Jian, Xiao, Wenfei, Xin, Ya, Qiu, Jieren, Hu, Weimin, Yao, Haigen, Ying, Wu, Fu, Yaping, Tong, Jianxin, Chen, Zhongzhong, Ruan, Songlin, Ma, Huasheng

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.27 MB

english, 2016

176

Analysis of transcriptional response to heat stress inRhazya stricta

Obaid, Abdullah Y., Sabir, Jamal S. M., Atef, Ahmed, Liu, Xuan, Edris, Sherif, El-Domyati, Fotouh M., Mutwakil, Mohammed Z., Gadalla, Nour O., Hajrah, Nahid H., Al-Kordy, Magdy A., Hall, Neil, Bahield

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.66 MB

english, 2016

177

Tracheid cell-wall structures and locations of (1 → 4)-β-d-galactans and (1 → 3)-β-d-glucans in compression woods of radiata pine (Pinus radiata D. Don)

Zhang, Miao, Chavan, Ramesh R., Smith, Bronwen G., McArdle, Brian H., Harris, Philip J.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.87 MB

english, 2016

178

Genome-wide association mapping of quantitative traits in a breeding population of sugarcane

Racedo, Josefina, Gutiérrez, Lucía, Perera, María Francisca, Ostengo, Santiago, Pardo, Esteban Mariano, Cuenya, María Inés, Welin, Bjorn, Castagnaro, Atilio Pedro

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.28 MB

english, 2016

179

Functional and regulatory conservation of the soybean ER stress-induced DCD/NRP-mediated cell death signaling in plants

Reis, Pedro A. B., Carpinetti, Paola A., Freitas, Paula P.J., Santos, Eulálio G.D., Camargos, Luiz F., Oliveira, Igor H.T., Silva, José Cleydson F., Carvalho, Humberto H., Dal-Bianco, Maximiller, Soar

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.93 MB

english, 2016

180

The DAG1 transcription factor negatively regulates the seed-to-seedling transition in Arabidopsis acting on ABA and GA levels

Boccaccini, Alessandra, Lorrai, Riccardo, Ruta, Veronica, Frey, Anne, Mercey-Boutet, Stephanie, Marion-Poll, Annie, Tarkowská, Danuše, Strnad, Miroslav, Costantino, Paolo, Vittorioso, Paola

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.22 MB

english, 2016

181

Novel small molecule modulators of plant growth and development identified by high-content screening with plant pollen

Chuprov–Netochin, Roman, Neskorodov, Yaroslav, Marusich, Elena, Mishutkina, Yana, Volynchuk, Polina, Leonov, Sergey, Skryabin, Konstantin, Ivashenko, Andrey, Palme, Klaus, Touraev, Alisher

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.79 MB

english, 2016

182

A novel mutant allele ofSSI2confers a better balance between disease resistance and plant growth inhibition onArabidopsis thaliana

Yang, Wei, Dong, Ran, Liu, Li, Hu, Zhubing, Li, Jing, Wang, Yong, Ding, Xinhua, Chu, Zhaohui

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.54 MB

english, 2016

183

Conservation of the role of INNER NO OUTER in development of unitegmic ovules of the Solanaceae despite a divergence in protein function

Skinner, Debra J., Brown, Ryan H., Kuzoff, Robert K., Gasser, Charles S.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.76 MB

english, 2016

184

A novel role for STOMATAL CARPENTER 1 in stomata patterning

Castorina, Giulia, Fox, Samantha, Tonelli, Chiara, Galbiati, Massimo, Conti, Lucio

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.89 MB

english, 2016

185

Comparative transcriptome sequencing andde novoanalysis ofVaccinium corymbosumduring fruit and color development

Li, Lingli, Zhang, Hehua, Liu, Zhongshuai, Cui, Xiaoyue, Zhang, Tong, Li, Yanfang, Zhang, Lingyun

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.14 MB

english, 2016

186

Expression of B-class MADS-box genes in response to variations in photoperiod is associated with chasmogamous and cleistogamous flower development in Viola philippica

Li, Qiaoxia, Huo, Qingdi, Wang, Juan, Zhao, Jing, Sun, Kun, He, Chaoying

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.65 MB

english, 2016

187

Identification of single nucleotide polymorphism markers associated with resistance to bruchids (Callosobruchus spp.) in wild mungbean (Vigna radiata var. sublobata) and cultivated V. radiata through genotyping by sequencing and quantitative trait locus analysis

Schafleitner, Roland, Huang, Shu-mei, Chu, Shui-hui, Yen, Jo-yi, Lin, Chen-yu, Yan, Miao-rong, Krishnan, Bharath, Liu, Mao-sen, Lo, Hsiao-feng, Chen, Chien-yu, Chen, Long-fang O., Wu, Dung-chi, Bui, T

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.65 MB

english, 2016

188

Nitric oxide is involved in hydrogen gas-induced cell cycle activation during adventitious root formation in cucumber

Zhu, Yongchao, Liao, Weibiao, Niu, Lijuan, Wang, Meng, Ma, Zhanjun

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.08 MB

english, 2016

189

Comparative transcriptome profiling of the fertile and sterile flower buds of a dominant genic male sterile line in sesame (Sesamum indicumL.)

Liu, Hongyan, Tan, Mingpu, Yu, Haijuan, Li, Liang, Zhou, Fang, Yang, Minmin, Zhou, Ting, Zhao, Yingzhong

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 873 KB

english, 2016

190

Application of a library of near isogenic lines to understand context dependent expression of QTL for grain yield and adaptive traits in bread wheat

Farré, Alba, Sayers, Liz, Leverington-Waite, Michelle, Goram, Richard, Orford, Simon, Wingen, Luzie, Mumford, Cathy, Griffiths, Simon

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 822 KB

english, 2016

191

Modification of the fatty acid composition in Arabidopsis and maize seeds using a stearoyl-acyl carrier protein desaturase-1 (ZmSAD1) gene

Du, Hewei, Huang, Min, Hu, Jieyun, Li, Jiansheng

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 966 KB

english, 2016

192

Hydrogen cyanamide breaks grapevine bud dormancy in the summer through transient activation of gene expression and accumulation of reactive oxygen and nitrogen species

Sudawan, Boonyawat, Chang, Chih-Sheng, Chao, Hsiu-fung, Ku, Maurice S. B., Yen, Yung-fu

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.71 MB

english, 2016

193

Integrated analysis of gene expression from carbon metabolism, proteome and metabolome, reveals altered primary metabolism in Eucalyptus grandis bark, in response to seasonal variation

Budzinski, Ilara Gabriela Frasson, Moon, David H., Morosini, Júlia Silva, Lindén, Pernilla, Bragatto, Juliano, Moritz, Thomaz, Labate, Carlos Alberto

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.02 MB

english, 2016

194

The fifth leaf and spike organs of barley (Hordeum vulgareL.) display different physiological and metabolic responses to drought stress

Hein, Jordan A., Sherrard, Mark E., Manfredi, Kirk P., Abebe, Tilahun

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 791 KB

english, 2016

195

Nitrogen remobilisation facilitates adventitious root formation on reversible dark-induced carbohydrate depletion inPetunia hybrida

Zerche, Siegfried, Haensch, Klaus-Thomas, Druege, Uwe, Hajirezaei, Mohammad-Reza

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.15 MB

english, 2016

196

Evolutionary relationships in Panicoid grasses based on plastome phylogenomics (Panicoideae; Poaceae)

Burke, Sean V., Wysocki, William P., Zuloaga, Fernando O., Craine, Joseph M., Pires, J. Chris, Edger, Patrick P., Mayfield-Jones, Dustin, Clark, Lynn G., Kelchner, Scot A., Duvall, Melvin R.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1017 KB

english, 2016

197

Repeat Composition of CenH3-chromatin and H3K9me2-marked heterochromatin in Sugar Beet (Beta vulgaris)

Kowar, Teresa, Zakrzewski, Falk, Macas, Jiří, Kobližková, Andrea, Viehoever, Prisca, Weisshaar, Bernd, Schmidt, Thomas

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.58 MB

english, 2016

198

Genome-wide association mapping of soybean chlorophyll traits based on canopy spectral reflectance and leaf extracts

Dhanapal, Arun Prabhu, Ray, Jeffery D., Singh, Shardendu K., Hoyos-Villegas, Valerio, Smith, James R., Purcell, Larry C., Fritschi, Felix B.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

199

Metabolic model of central carbon and energy metabolisms of growingArabidopsis thalianain relation to sucrose translocation

Maksim Zakhartsev,Irina Medvedeva,Yury Orlov,Ilya Akberdin…

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.32 MB

english, 2016

200

Transcriptomic and proteomic approach to identify differentially expressed genes and proteins inArabidopsis thalianamutants lacking chloroplastic 1 and cytosolic FBPases reveals several levels of metabolic regulation

Mauricio Soto-Suárez,Antonio J. Serrato,José A. Rojas-González…

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.72 MB

english, 2016

201

Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?

Oz Barazani,Alexandra Keren-Keiserman,Erik Westberg,Nir Hanin…

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.01 MB

english, 2016

202

Dual functions of theZmCCT-associated quantitative trait locus in flowering and stress responses under long-day conditions

Lixia Ku,Lei Tian,Huihui Su,Cuiling Wang,Xiaobo Wang,Liuji Wu…

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.30 MB

english, 2016

203

Quantitative trait variation is revealed in a novel hypomethylated population of woodland strawberry (Fragaria vesca)

Jihua Xu,Karen K. Tanino,Kyla N. Horner,Stephen J. Robinson

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.65 MB

english, 2016

204

Range-wide phenotypic and genetic differentiation in wild sunflower

Edward V. McAssey,Jonathan Corbi,John M. Burke

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 660 KB

english, 2016

205

Transcript profiling for early stages during embryo development in Scots pine

Irene Merino,Malin Abrahamsson,Lieven Sterck,Blanca Craven-Bartle…

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.01 MB

english, 2016

206

Hypoxia response inArabidopsisroots infected byPlasmodiophora brassicaesupports the development of clubroot

Antoine Gravot,Gautier Richard,Tanguy Lime,Séverine Lemarié…

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.77 MB

english, 2016

207

Direct stacking of sequence-specific nuclease-induced mutations to produce high oleic and low linolenic soybean oil

Zachary L. Demorest,Andrew Coffman,Nicholas J. Baltes…

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 934 KB

english, 2016

208

Regulation of polar auxin transport in grapevine fruitlets (Vitis viniferaL.) and the proposed role of auxin homeostasis during fruit abscission

Nathalie Kühn,Alejandra Serrano,Carlos Abello,Aníbal Arce…

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.51 MB

english, 2016

209

Biosensor-based spatial and developmental mapping of maize leaf glutamine at vein-level resolution in response to different nitrogen rates and uptake/assimilation durations

Travis L. Goron,Manish N. Raizada

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.69 MB

english, 2016

210

Genome-wide association analysis of forage quality in maize mature stalk

Hongwu Wang,Kun Li,Xiaojiao Hu,Zhifang Liu,Yujin Wu…

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.57 MB

english, 2016

211

Resequencing ofCapsicum annuumparental lines (YCM334 and Taean) for the genetic analysis of bacterial wilt resistance

Yang Jae Kang,Yul-Kyun Ahn,Ki-Taek Kim,Tae-Hwan Jun

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.17 MB

english, 2016

212

Map-based cloning and functional analysis of YGL8, which controls leaf colour in rice (Oryza sativa)

Zhu, Xiaoyan, Guo, Shuang, Wang, Zhongwei, Du, Qing, Xing, Yadi, Zhang, Tianquan, Shen, Wenqiang, Sang, Xianchun, Ling, Yinghua, He, Guanghua

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.73 MB

english, 2016

213

Exploring miRNAs involved in blue/UV-A light response in Brassica rapa reveals special regulatory mode during seedling development

Zhou, Bo, Fan, Pengzhen, Li, Yuhua, Yan, Haifang, Xu, Qijiang

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.48 MB

english, 2016

214

sHSPdb: a database for the analysis of small Heat Shock Proteins

Jaspard, Emmanuel, Hunault, Gilles

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.86 MB

english, 2016

215

Seamless editing of the chloroplast genome in plants

Martin Avila, Elena, Gisby, Martin F., Day, Anil

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.37 MB

english, 2016

216

CicerTransDB 1.0: a resource for expression and functional study of chickpea transcription factors

Gayali, Saurabh, Acharya, Shankar, Lande, Nilesh Vikram, Pandey, Aarti, Chakraborty, Subhra, Chakraborty, Niranjan

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.10 MB

english, 2016

217

Transcriptome profiling analysis for two Tibetan wild barley genotypes in responses to low nitrogen

Quan, Xiaoyan, Zeng, Jianbin, Ye, Lingzhen, Chen, Guang, Han, Zhigang, Shah, Jawad Munawar, Zhang, Guoping

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.23 MB

english, 2016

218

A natural frameshift mutation in Campanula EIL2 correlates with ethylene insensitivity in flowers

Jensen, Line, Hegelund, Josefine Nymark, Olsen, Andreas, Lütken, Henrik, Müller, Renate

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.74 MB

english, 2016

219

Domestication-driven Gossypium profilin 1 (GhPRF1) gene transduces early flowering phenotype in tobacco by spatial alteration of apical/floral-meristem related gene expression

Pandey, Dhananjay K., Chaudhary, Bhupendra

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.83 MB

english, 2016

220

Erratum to: SNP-based analysis of genetic diversity reveals important alleles associated with seed size in rice

Tang, Weijie, Wu, Tingting, Ye, Jian, Sun, Juan, Jiang, Yue, Yu, Jun, Tang, Jianpeng, Chen, Gaoming, Wang, Chunming, Wan, Jianmin

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 345 KB

english, 2016

221

Erratum to: Functional and evolutionary analyses of the miR156 and miR529 families in land plants

Morea, Edna Gicela Ortiz, da Silva, Eder Marques, e Silva, Geraldo Felipe Ferreira, Valente, Guilherme Targino, Barrera Rojas, Carlos Hernan, Vincentz, Michel, Nogueira, Fabio Tebaldi Silveira

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 336 KB

english, 2016

222

Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses

Yu, Ying, Wu, Guangwen, Yuan, Hongmei, Cheng, Lili, Zhao, Dongsheng, Huang, Wengong, Zhang, Shuquan, Zhang, Liguo, Chen, Hongyu, Zhang, Jian, Guan, Fengzhi

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.27 MB

english, 2016

223

Genome-wide identification and expression profiling reveal tissue-specific expression and differentially-regulated genes involved in gibberellin metabolism between Williams banana and its dwarf mutant

Chen, Jingjing, Xie, Jianghui, Duan, Yajie, Hu, Huigang, Hu, Yulin, Li, Weiming

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.64 MB

english, 2016

224

Transgenic studies reveal the positive role of LeEIL-1 in regulating shikonin biosynthesis in Lithospermum erythrorhizon hairy roots

Fang, Rongjun, Zou, Ailan, Zhao, Hua, Wu, Fengyao, Zhu, Yu, Zhao, Hu, Liao, Yonghui, Tang, Ren-Jie, Pang, Yanjun, Yang, Rongwu, Wang, Xiaoming, Qi, Jinliang, Lu, Guihua, Yang, Yonghua

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.04 MB

english, 2016

225

Tobacco TTG2 regulates vegetative growth and seed production via the predominant role of ARF8 in cooperation with ARF17 and ARF19

Ge, Jun, Li, Baoyan, Shen, Dan, Xie, Junyi, Long, Juying, Dong, Hansong

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.53 MB

english, 2016

226

Single and multiple resistance QTL delay symptom appearance and slow down root colonization by Aphanomyces euteiches in pea near isogenic lines

Lavaud, C., Baviere, M., Le Roy, G., Hervé, M. R., Moussart, A., Delourme, R., Pilet-Nayel, M-L.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1008 KB

english, 2016

227

Expression and functional analysis of citrus carotene hydroxylases: unravelling the xanthophyll biosynthesis in citrus fruits

Ma, Gang, Zhang, Lancui, Yungyuen, Witchulada, Tsukamoto, Issei, Iijima, Natsumi, Oikawa, Michiru, Yamawaki, Kazuki, Yahata, Masaki, Kato, Masaya

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.56 MB

english, 2016

228

BOTRYTIS-INDUCED KINASE1, a plasma membrane-localized receptor-like protein kinase, is a negative regulator of phosphate homeostasis in Arabidopsis thaliana

Zhang, Huijuan, Huang, Lei, Hong, Yongbo, Song, Fengming

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.84 MB

english, 2016

229

The functional divergence between SPA1 and SPA2 in Arabidopsis photomorphogenesis maps primarily to the respective N-terminal kinase-like domain

Chen, Song, Wirthmueller, Lennart, Stauber, Johannes, Lory, Niels, Holtkotte, Xu, Leson, Lisa, Schenkel, Christian, Ahmad, Margaret, Hoecker, Ute

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.18 MB

english, 2016

230

BnPME is progressively induced after microspore reprogramming to embryogenesis, correlating with pectin de-esterification and cell differentiation in Brassica napus

Solís, María-Teresa, Berenguer, Eduardo, Risueño, María C., Testillano, Pilar S.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 5.30 MB

english, 2016

231

Mapping a major QTL responsible for dwarf architecture in Brassica napus using a single-nucleotide polymorphism marker approach

Wang, Yankun, Chen, Wenjing, Chu, Pu, Wan, Shubei, Yang, Mao, Wang, Mingming, Guan, Rongzhan

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

232

Arabidopsis protein disulfide isomerase-8 is a type I endoplasmic reticulum transmembrane protein with thiol-disulfide oxidase activity

Yuen, Christen Y. L., Shek, Roger, Kang, Byung-Ho, Matsumoto, Kristie, Cho, Eun Ju, Christopher, David A.

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.16 MB

english, 2016

233

A novel Glycine soja homeodomain-leucine zipper (HD-Zip) I gene, Gshdz4, positively regulates bicarbonate tolerance and responds to osmotic stress in Arabidopsis

Cao, Lei, Yu, Yang, DuanMu, Huizi, Chen, Chao, Duan, Xiangbo, Zhu, Pinghui, Chen, Ranran, Li, Qiang, Zhu, Yanming, Ding, Xiaodong

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 2.38 MB

english, 2016

234

Identification of a stable major-effect QTL (Parth 2.1) controlling parthenocarpy in cucumber and associated candidate gene analysis via whole genome re-sequencing

Wu, Zhe, Zhang, Ting, Li, Lei, Xu, Jian, Qin, Xiaodong, Zhang, Tinglin, Cui, Li, Lou, Qunfeng, Li, Ji, Chen, Jinfeng

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 3.44 MB

english, 2016

235

Genotypic variation in biomass allocation in response to field drought has a greater affect on yield than gas exchange or phenology

Edwards, Christine E., Ewers, Brent E., Weinig, Cynthia

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 1.40 MB

english, 2016

236

RNAi-mediated down-regulation of the expression of OsFAD2-1: effect on lipid accumulation and expression of lipid biosynthetic genes in the rice grain

Tiwari, Gopal Ji, Liu, Qing, Shreshtha, Pushkar, Li, Zhongyi, Rahman, Sadequr

Journal:

BMC Plant Biology

Year:

2016

Language:

english

File:

PDF, 987 KB

english, 2016

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