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Volume 10; Issue 1
Main
BMC Structural Biology
Volume 10; Issue 1
BMC Structural Biology
Volume 10; Issue 1
1
Molecular modeling of the reductase domain to elucidate the reaction mechanism of reduction of peptidyl thioester into its corresponding alcohol in non-ribosomal peptide synthetases
Balachandran Manavalan
,
Senthil K Murugapiran
,
Gwang Lee
,
Sangdun Choi
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.24 MB
Your tags:
english, 2010
2
The structure of a reduced form of OxyR fromNeisseria meningitidis
Sarah Sainsbury
,
Jingshan Ren
,
Joanne E Nettleship
,
Nigel J Saunders
,
David I Stuart
,
Raymond J Owens
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 3.10 MB
Your tags:
english, 2010
3
Elastic network model of allosteric regulation in protein kinase PDK1
Gareth Williams
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.99 MB
Your tags:
english, 2010
4
Progesterone modulation of transmembrane helix-helix interactions between the α-subunit of Na/K-ATPase and phospholipid N-methyltransferase in the oocyte plasma membrane
Gene A Morrill
,
Adele B Kostellow
,
Amir Askari
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.65 MB
Your tags:
english, 2010
5
Novel structural features in two ZHX homeodomains derived from a systematic study of single and multiple domains
Louise E Bird
,
Jingshan Ren
,
Joanne E Nettleship
,
Gert E Folkers
,
Raymond J Owens
,
David K Stammers
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 3.80 MB
Your tags:
english, 2010
6
Active site plasticity revealed from the structure of the enterobacterial N-ribohydrolase RihA bound to a competitive inhibitor
Gianpiero Garau
,
Laura Muzzolini
,
Paola Tornaghi
,
Massimo Degano
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.48 MB
Your tags:
english, 2010
7
Solution structure of the human signaling protein RACK1
Kaliandra A Gonçalves
,
Julio C Borges
,
Julio C Silva
,
Priscila F Papa
,
Gustavo C Bressan
,
Iris L Torriani
,
Jörg Kobarg
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.63 MB
Your tags:
english, 2010
8
Structural definition and substrate specificity of the S28 protease family: the crystal structure of human prolylcarboxypeptidase
Stephen M Soisson
,
Sangita B Patel
,
Pravien D Abeywickrema
,
Noel J Byrne
,
Ronald E Diehl
,
Dawn L Hall
,
Rachael E Ford
,
John C Reid
,
Keith W Rickert
,
Jennifer M Shipman
,
Sujata Sharma
,
Kevin J Lumb
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.24 MB
Your tags:
english, 2010
9
Prediction of protein-protein interactions in dengue virus coat proteins guided by low resolution cryoEM structures
Rupali A Gadkari
,
Narayanaswamy Srinivasan
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 3.70 MB
Your tags:
english, 2010
10
Novel topological descriptors for analyzing biological networks
Matthias M Dehmer
,
Nicola N Barbarini
,
Kurt K Varmuza
,
Armin A Graber
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.34 MB
Your tags:
english, 2010
11
A kinesin motor in a force-producing conformation
Elisabeth Heuston
,
C Eric Bronner
,
F Jon Kull
,
Sharyn A Endow
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.25 MB
Your tags:
english, 2010
12
Crystal structure of the signaling helix coiled-coil domain of the β1 subunit of the soluble guanylyl cyclase
Xiaolei Ma
,
Annie Beuve
,
Focco van den Akker
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 4.47 MB
Your tags:
english, 2010
13
Prediction of protein motions from amino acid sequence and its application to protein-protein interaction
Shuichi Hirose
,
Kiyonobu Yokota
,
Yutaka Kuroda
,
Hiroshi Wako
,
Shigeru Endo
,
Satoru Kanai
,
Tamotsu Noguchi
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.51 MB
Your tags:
english, 2010
14
Evidence for alternative quaternary structure in a bacterial Type III secretion system chaperone
Michael L Barta
,
Lingling Zhang
,
Wendy L Picking
,
Brian V Geisbrecht
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.04 MB
Your tags:
english, 2010
15
Improving predicted protein loop structure ranking using a Pareto-optimality consensus method
Yaohang Li
,
Ionel Rata
,
See-wing Chiu
,
Eric Jakobsson
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.70 MB
Your tags:
english, 2010
16
Structural motif screening reveals a novel, conserved carbohydrate-binding surface in the pathogenesis-related protein PR-5d
Andrew C Doxey
,
Zhenyu Cheng
,
Barbara A Moffatt
,
Brendan J McConkey
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.98 MB
Your tags:
english, 2010
17
Systematic analysis of short internal indels and their impact on protein folding
RyangGuk Kim
,
Jun-tao Guo
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.99 MB
Your tags:
english, 2010
18
Molecular basis for defect in Alix-binding by alternatively spliced isoform of ALG-2 (ALG-2ΔGF122) and structural roles of F122 in target recognition
Tatsutoshi Inuzuka
,
Hironori Suzuki
,
Masato Kawasaki
,
Hideki Shibata
,
Soichi Wakatsuki
,
Masatoshi Maki
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.06 MB
Your tags:
english, 2010
19
Comparing interfacial dynamics in protein-protein complexes: an elastic network approach
Andrea Zen
,
Cristian Micheletti
,
Ozlem Keskin
,
Ruth Nussinov
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 753 KB
Your tags:
english, 2010
20
Elucidation of the conformational free energy landscape inH.pyloriLuxS and its implications to catalysis
Moitrayee Bhattacharyya
,
Saraswathi Vishveshwara
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.88 MB
Your tags:
english, 2010
21
Mechanisms underlying dioxygen reduction in laccases. Structural and modelling studies focusing on proton transfer
Isabel Bento
,
Catarina S Silva
,
Zhenjia Chen
,
Lígia O Martins
,
Peter F Lindley
,
Cláudio M Soares
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.45 MB
Your tags:
english, 2010
22
Position-specific propensities of amino acids in theβ-strand
Nicholus Bhattacharjee
,
Parbati Biswas
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.07 MB
Your tags:
english, 2010
23
Analysis of the role of PCNA-DNA contacts during clamp loading
Randall McNally
,
Gregory D Bowman
,
Eric R Goedken
,
Mike O'Donnell
,
John Kuriyan
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 6.75 MB
Your tags:
english, 2010
24
The intriguing Cyclophilin A-HIV-1 Vpr interaction: prolylcis/transisomerisation catalysis and specific binding
Sara M Solbak
,
Tove R Reksten
,
Victor Wray
,
Karsten Bruns
,
Ole Horvli
,
Arnt J Raae
,
Petra Henklein
,
Peter Henklein
,
Rene Röder
,
David Mitzner
,
Ulrich Schubert
,
Torgils Fossen
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 5.74 MB
Your tags:
english, 2010
25
Relating the shape of protein binding sites to binding affinity profiles: is there an association?
Zoltán Simon
,
Margit Vigh-Smeller
,
Ágnes Peragovics
,
Gábor Csukly
,
Gergely Zahoránszky-Kőhalmi
,
Anna Á Rauscher
,
Balázs Jelinek
,
Péter Hári
,
István Bitter
,
András Málnási-Csizmadia
,
Pál Czobor
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.22 MB
Your tags:
english, 2010
26
A mutational analysis and molecular dynamics simulation of quinolone resistance proteins QnrA1 and QnrC fromProteus mirabilis
Qinglan Guo
,
Jingwei Weng
,
Xiaogang Xu
,
Minghua Wang
,
Xiaoying Wang
,
Xinyu Ye
,
Wenning Wang
,
Minggui Wang
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.60 MB
Your tags:
english, 2010
27
Prediction and analysis of the modular structure of cytochrome P450 monooxygenases
Demet Sirim
,
Michael Widmann
,
Florian Wagner
,
Jürgen Pleiss
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.90 MB
Your tags:
english, 2010
28
Investigation and improvement of DNA cleavage models of polyamide + Cu(II) nuclease + OOH-ligands bound to DNA
Hongwei Yue
,
Yanyan Zhu
,
Yan Wang
,
Guangju Chen
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 4.13 MB
Your tags:
english, 2010
29
Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteasesin silicodocked to different inhibitors
Cristina Ribeiro
,
Roberto C Togawa
,
Izabella AP Neshich
,
Ivan Mazoni
,
Adauto L Mancini
,
C de Melo Raquel Minardi
,
Carlos H da Silveira
,
José G Jardine
,
Marcelo M Santoro
,
Goran Neshich
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 3.02 MB
Your tags:
english, 2010
30
DockAnalyse: an application for the analysis of protein-protein interactions
Isaac Amela
,
Pedro Delicado
,
Antonio Gómez
,
Sílvia Bonàs
,
Enrique Querol
,
Juan Cedano
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.01 MB
Your tags:
english, 2010
31
New insight into the dynamic properties and the active site architecture of H-Ras p21 revealed by X-ray crystallography at very high resolution
Björn U Klink
,
Axel J Scheidig
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.85 MB
Your tags:
english, 2010
32
CoNSEnsX: an ensemble view of protein structures and NMR-derived experimental data
Annamária F Ángyán
,
Balázs Szappanos
,
András Perczel
,
Zoltán Gáspári
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 3.82 MB
Your tags:
english, 2010
33
Identification of recurring protein structure microenvironments and discovery of novel functional sites around CYS residues
Shirley Wu
,
Tianyun Liu
,
Russ B Altman
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.85 MB
Your tags:
english, 2010
34
Designing coarse grained-and atom based-potentials for protein-protein docking
Dror Tobi
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 918 KB
Your tags:
english, 2010
35
Modulation of inhibitory activity of xylanase - α-amylase inhibitor protein (XAIP): binding studies and crystal structure determination of XAIP- II fromScadoxus multiflorusat 1.2 Å resolution
Sanjit Kumar
,
Nagendra Singh
,
Biswajit Mishra
,
Divya Dube
,
Mau Sinha
,
S Baskar Singh
,
Sharmistha Dey
,
Punit Kaur
,
Sujata Sharma
,
Tej P Singh
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.56 MB
Your tags:
english, 2010
36
Investigating dynamic and energetic determinants of protein nucleic acid recognition: analysis of the zinc finger zif268-DNA complexes
Rubben Torella
,
Elisabetta Moroni
,
Michele Caselle
,
Giulia Morra
,
Giorgio Colombo
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.68 MB
Your tags:
english, 2010
37
The maize ALDH protein superfamily: linking structural features to functional specificities
Jose C Jimenez-Lopez
,
Emma W Gachomo
,
Manfredo J Seufferheld
,
Simeon O Kotchoni
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 2.29 MB
Your tags:
english, 2010
38
Modeling of loops in proteins: a multi-method approach
Michal Jamroz
,
Andrzej Kolinski
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.95 MB
Your tags:
english, 2010
39
Computational analysis and determination of a highly conserved surface exposed segment in H5N1 avian flu and H1N1 swine flu neuraminidase
Ambarnil Ghosh
,
Ashesh Nandy
,
Papiya Nandy
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 768 KB
Your tags:
english, 2010
40
Structural investigation of zymogenic and activated forms of human blood coagulation factor VIII: a computational molecular dynamics study
Divi Venkateswarlu
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 3.97 MB
Your tags:
english, 2010
41
Forced unbinding of GPR17 ligands from wild type and R255I mutant receptor models through a computational approach
Chiara Parravicini
,
Maria P Abbracchio
,
Piercarlo Fantucci
,
Graziella Ranghino
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 4.03 MB
Your tags:
english, 2010
42
Assessing the structural conservation of protein pockets to study functional and allosteric sites: implications for drug discovery
Alejandro Panjkovich
,
Xavier Daura
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.69 MB
Your tags:
english, 2010
43
Molecular determinants of improved cathepsin B inhibition by new cystatins obtained by DNA shuffling
Valadares, Napoleão F
,
Dellamano, Márcia
,
Soares-Costa, Andrea
,
Henrique-Silva, Flávio
,
Garratt, Richard C
Journal:
BMC Structural Biology
Year:
2010
Language:
english
File:
PDF, 1.94 MB
Your tags:
english, 2010
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