Volume 17; Issue 1

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Clinical Proteomics
Volume 17; Issue 1

Clinical Proteomics

Volume 17; Issue 1

1

The omics revolution: beyond genomics. A meeting report

Journal:

Clinical Proteomics

Year:

2020

Language:

english

File:

PDF, 612 KB

english, 2020

2

Proteomic analysis of degradation ubiquitin signaling by ubiquitin occupancy changes responding to 26S proteasome inhibition

Hristova, Ventzislava, Sun, Shisheng, Zhang, Hui, Chan, Daniel W.

Journal:

Clinical Proteomics

Year:

2020

Language:

english

File:

PDF, 1.44 MB

english, 2020

3

Prediction of neoadjuvant chemotherapeutic efficacy in patients with locally advanced gastric cancer by serum IgG glycomics profiling

Qin, Ruihuan, Yang, Yupeng, Chen, Hao, Qin, Wenjun, Han, Jing, Gu, Yong, Pan, Yiqing, Cheng, Xi, Zhao, Junjie, Wang, Xuefei, Ren, Shifang, Sun, Yihong, Gu, Jianxin

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.64 MB

2020

4

Quantitative site- and structure-specific N-glycoproteomics characterization of differential N-glycosylation in MCF-7/ADR cancer stem cells

Xu, Feifei, Wang, Yue, Xiao, Kaijie, Hu, Yechen, Tian, Zhixin, Chen, Yun

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.61 MB

2020

5

Discovery of a putative blood-based protein signature associated with response to ALK tyrosine kinase inhibition

CouÃ«toux du Tertre, Mathilde, Marques, Maud, McNamara, Suzan, Gambaro, Karen, Hoffert, Cyrla, Tremblay, Lise, Bouchard, Nicole, Diaconescu, Razvan, Blais, Normand, Couture, Christian, Pelsser, Vincen

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 2.49 MB

2020

6

Correction to: Proteomic analysis of degradation ubiquitin signaling by ubiquitin occupancy changes responding to 26S proteasome inhibition

Hristova, Ventzislava, Sun, Shisheng, Zhang, Hui, Chan, Daniel W.

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 644 KB

2020

7

The different expression of glycogen phosphorylases in renal clear cell renal carcinoma and chromophobe renal carcinoma

Lu, Yang, Luo, Guangda, Zhu, Songbiao, Wang, Xu, Chen, Yuling, Dong, ZhouHuan, Wang, Shiyu, Ma, Jie, Deng, Haiteng, Wu, Di, Dong, Jun

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 5.35 MB

2020

8

The impact of ultraviolet- and infrared-based laser microdissection technology on phosphoprotein detection in the laser microdissection-reverse phase protein array workflow

Hunt, Allison L., Pierobon, Mariaelena, Baldelli, Elisa, Oliver, Julie, Mitchell, Dave, Gist, Glenn, Bateman, Nicholas W., Larry Maxwell, G., Petricoin, Emanuel F., Conrads, Thomas P.

Journal:

Clinical Proteomics

Year:

2020

Language:

english

File:

PDF, 1.31 MB

english, 2020

9

Urinary proteomics of Henoch-SchÃ¶nlein purpura nephritis in children using liquid chromatography-tandem mass spectrometry

Fang, Xiang, Wu, Heyan, Lu, Mei, Cao, Yan, Wang, Ren, Wang, Meiqiu, Gao, Chunlin, Xia, Zhengkun

Journal:

Clinical Proteomics

Year:

2020

Language:

english

File:

PDF, 2.98 MB

english, 2020

10

Early detection of Ebola virus proteins in peripheral blood mononuclear cells from infected mice

Ward, Michael D., Kenny, Tara, Bruggeman, Ernie, Kane, Christopher D., Morrell, Courtney L., Kane, Molly M., Bixler, Sandra, Grady, Sarah L., Quizon, Rachel S., Astatke, Mekbib, Cazares, Lisa H.

Journal:

Clinical Proteomics

Year:

2020

Language:

english

File:

PDF, 2.10 MB

english, 2020

11

Development of a novel method for the quantification of tyrosine 39 phosphorylated Î±- and Î²-synuclein in human cerebrospinal fluid

Na, Chan Hyun, Sathe, Gajanan, Rosenthal, Liana S., Moghekar, Abhay R., Dawson, Valina L., Dawson, Ted M., Pandey, Akhilesh

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 797 KB

2020

12

Identification of TUBB2A by quantitative proteomic analysis as a novel biomarker for the prediction of distant metastatic breast cancer

Shin, Dongyoon, Park, Joonho, Han, Dohyun, Moon, Ji Hye, Ryu, Han Suk, Kim, Youngsoo

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 4.00 MB

2020

13

Recent advances in mass spectrometry based clinical proteomics: applications to cancer research

Macklin, Andrew, Khan, Shahbaz, Kislinger, Thomas

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.03 MB

2020

14

New risk score for predicting steroid resistance in patients with focal segmental glomerulosclerosis or minimal change disease

Weng, Qinjie, Zhou, Qiongxiu, Tong, Jun, Jin, Yuanmeng, Liu, Yunzi, Yu, Xialian, Pan, Xiaoxia, Ren, Hong, Wang, Weiming, Xie, Jingyuan, Chen, Nan

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.17 MB

2020

15

Effects of cryopreservation and long-term culture on biological characteristics and proteomic profiles of human umbilical cord-derived mesenchymal stem cells

Fu, Xufeng, Xu, Bo, Jiang, Jiang, Du, Xing, Yu, Xiaoli, Yan, Yaping, Li, Shanshan, Inglis, Briauna Marie, Ma, Huiming, Wang, Hongyan, Pei, Xiuying, Si, Wei

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 6.09 MB

2020

16

Proteomic analysis of human synovial fluid reveals potential diagnostic biomarkers for ankylosing spondylitis

Lee, Ji-Hyun, Jung, Jae Hun, Kim, Jeesoo, Baek, Won-Ki, Rhee, Jinseol, Kim, Tae-Hwan, Kim, Sang-Hyon, Kim, Kwang Pyo, Son, Chang-Nam, Kim, Jong-Seo

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.63 MB

2020

17

A comprehensive systematic review of CSF proteins and peptides that define Alzheimerâs disease

Pedrero-Prieto, Cristina M., GarcÃa-Carpintero, Sonia, FrontiÃ±Ã¡n-Rubio, Javier, Llanos-GonzÃ¡lez, Emilio, Aguilera GarcÃa, Cristina, AlcaÃn, Francisco J., Lindberg, Iris, DurÃ¡n-Prado, Mario, Pei

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.23 MB

2020

18

Targeted mass spectrometry to quantify brain-derived cerebrospinal fluid biomarkers in Alzheimerâs disease

Zhou, Maotian, Haque, Rafi U., Dammer, Eric B., Duong, Duc M., Ping, Lingyan, Johnson, Erik C. B., Lah, James J., Levey, Allan I., Seyfried, Nicholas T.

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.17 MB

2020

19

Human follicular fluid proteome reveals association between overweight status and oocyte maturation abnormality

Liu, Xin, Wang, Yanhua, Zhu, Peng, Wang, Jiahui, Liu, Juan, Li, Ning, Wang, Wenting, Zhang, Wendi, Zhang, Chengli, Wang, Yanwei, Shen, Xiaofang, Liu, Fujun

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 4.67 MB

2020

20

Identification of pathogens from native urine samples by MALDI-TOF/TOF tandem mass spectrometry

Oros, Damir, Ceprnja, Marina, Zucko, Jurica, Cindric, Mario, Hozic, Amela, Skrlin, Jasenka, Barisic, Karmela, Melvan, Ena, Uroic, Ksenija, Kos, Blazenka, Starcevic, Antonio

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 956 KB

2020

21

Laser capture microdissection coupled mass spectrometry (LCM-MS) for spatially resolved analysis of formalin-fixed and stained human lung tissues

Herrera, Jeremy A., Mallikarjun, Venkatesh, Rosini, Silvia, Montero, Maria Angeles, Lawless, Craig, Warwood, Stacey, OâCualain, Ronan, Knight, David, Schwartz, Martin A., Swift, Joe

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 3.14 MB

2020

22

Activity-based protein profiling guided identification of urine proteinase 3 activity in subclinical rejection after renal transplantation

Navarrete, Mario, Korkmaz, Brice, Guarino, Carla, Lesner, Adam, Lao, Ying, Ho, Julie, Nickerson, Peter, Wilkins, John A.

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.33 MB

2020

23

The plasma peptides of sepsis

Thavarajah, Thanusi, dos Santos, Claudia C., Slutsky, Arthur S., Marshall, John C., Bowden, Pete, Romaschin, Alexander, Marshall, John G.

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 3.30 MB

2020

24

Using phosphoproteomics data to understand cellular signaling: a comprehensive guide to bioinformatics resources

Savage, Sara R., Zhang, Bing

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.66 MB

2020

25

Proteomic approaches for characterizing renal cell carcinoma

Clark, David J., Zhang, Hui

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 2.07 MB

2020

26

Proteomic analysis of synovial fluid from rheumatic arthritis and spondyloarthritis patients

Birkelund, Svend, Bennike, Tue Bjerg, Kastaniegaard, Kenneth, Lausen, Mads, Poulsen, Thomas Bouet GuldbÃ¦k, Kragstrup, Tue Wenzel, Deleuran, Bent Winding, Christiansen, Gunna, Stensballe, Allan

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 3.79 MB

2020

27

Quantitative analysis of differentially expressed proteins in psoriasis vulgaris using tandem mass tags and parallel reaction monitoring

Li, Yu, Lin, Peng, Wang, Siyao, Li, Shuang, Wang, Rui, Yang, Lin, Wang, Hongmei

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 3.05 MB

2020

28

CSF extracellular vesicle proteomics demonstrates altered protein homeostasis in amyotrophic lateral sclerosis

Thompson, Alexander G., Gray, Elizabeth, MÃ¤ger, Imre, ThÃ©zÃ©nas, Marie-LaÃ«titia, Charles, Philip D., Talbot, Kevin, Fischer, Roman, Kessler, Benedikt M., Wood, Mathew, Turner, Martin R.

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 4.56 MB

2020

29

Chloride intracellular channel 4 participate in the protective effect of Ginkgolide B in MPP+ injured MN9D cells: insight from proteomic analysis

Feng, Zili, Zhu, Zhibin, Chen, Wang, Bai, Yu, Hu, Daihua, Cheng, Jia

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 2.92 MB

2020

30

Development of robust targeted proteomics assays for cerebrospinal fluid biomarkers in multiple sclerosis

Guldbrandsen, Astrid, Lereim, Ragnhild Reehorst, Jacobsen, Mari, Garberg, Hilde, Kroksveen, Ann Cathrine, Barsnes, Harald, Berven, Frode S.

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 3.52 MB

2020

31

A nomogram based on glycomic biomarkers in serum and clinicopathological characteristics for evaluating the risk of peritoneal metastasis in gastric cancer

Zhao, Junjie, Qin, Ruihuan, Chen, Hao, Yang, Yupeng, Qin, Wenjun, Han, Jing, Wang, Xuefei, Ren, Shifang, Sun, Yihong, Gu, Jianxin

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 2.77 MB

2020

32

A proteomic repertoire of autoantigens identified from the classic autoantibody clinical test substrate HEp-2 cells

Wang, Julia Y., Zhang, Wei, Rho, Jung-hyun, Roehrl, Michael W., Roehrl, Michael H.

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.44 MB

2020

33

A robust multiplex immunoaffinity mass spectrometry assay (PromarkerD) for clinical prediction of diabetic kidney disease

Bringans, Scott, Ito, Jason, Casey, Tammy, Thomas, Sarah, Peters, Kirsten, Crossett, Ben, Coleman, Orla, Ebhardt, Holger A., Pennington, Stephen R., Lipscombe, Richard

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.62 MB

2020

34

Early changes in tear film protein profiles after femtosecond LASIK surgery

NÃ¤ttinen, Janika, MÃ¤kinen, Petri, Aapola, Ulla, Orsila, Lasse, PietilÃ¤, Juhani, Uusitalo, Hannu

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.53 MB

2020

35

Application of SWATH mass spectrometry in the identification of circulating proteins does not predict future weight gain in early psychosis

Heald, Adrian, Azadbakht, Narges, Geary, Bethany, Conen, Silke, Fachim, Helene, Lee, Dave Chi Hoo, Geifman, Nophar, Farman, Sanam, Howes, Oliver, Whetton, Anthony, Deakin, Bill

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 849 KB

2020

36

Comparative analysis of differentially abundant proteins quantified by LCâMS/MS between flash frozen and laser microdissected OCT-embedded breast tumor samples

Sturtz, Lori A., Wang, Guisong, Shah, Punit, Searfoss, Richard, Raj-Kumar, Praveen-Kumar, Hooke, Jeffrey A., Fantacone-Campbell, J. Leigh, Deyarmin, Brenda, Cutler, Mary Lou, Sarangarajan, Rangaprasad

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 2.91 MB

2020

37

Subclinical effects of remote ischaemic conditioning in human kidney transplants revealed by quantitative proteomics

Thorne, Adam M., Huang, Honglei, OâBrien, Darragh P., Eijken, Marco, Krogstrup, Nicoline Valentina, Norregaard, Rikke, MÃ¸ller, Bjarne, Ploeg, Rutger J., Jespersen, Bente, Kessler, Benedikt M.

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.78 MB

2020

38

Clinical proteomics for prostate cancer: understanding prostate cancer pathology and protein biomarkers for improved disease management

Tonry, Claire, Finn, Stephen, Armstrong, John, Pennington, Stephen R.

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 1.72 MB

2020

39

Tear proteomic profile in three distinct ocular surface diseases: keratoconus, pterygium, and dry eye related to graft-versus-host disease

de Almeida Borges, Daniel, Alborghetti, Marcos Rodrigo, Franco Paes Leme, Adriana, Ramos Domingues, Romenia, Duarte, Bruna, Veiga, Melina, Trindade Ferrer, Marilia, Viana Wanzeler, Ana Claudia, Leite

Journal:

Clinical Proteomics

Year:

2020

File:

PDF, 3.42 MB

2020

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