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Volume 4; Issue 1
Main
Virus Evolution
Volume 4; Issue 1
Virus Evolution
Volume 4; Issue 1
1
Genetic diversity and cross-species transmission of kobuviruses in Vietnam
Lu, Lu
,
Van Dung, Nguyen
,
Ivens, Alasdair
,
Bogaardt, Carlijn
,
O’Toole, Aine
,
Bryant, Juliet E
,
Carrique-Mas, Juan
,
Van Cuong, Nguyen
,
Anh, Pham Hong
,
Rabaa, Maia A
,
Tue, Ngo Tri
,
Thwaites, Guy E
,
Bake
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 741 KB
Your tags:
english, 2018
2
Unravelling the complicated evolutionary and dissemination history of HIV-1M subtype A lineages
Tongo, Marcel
,
Harkins, Gordon W
,
Dorfman, Jeffrey R
,
Billings, Erik
,
Tovanabutra, Sodsai
,
de Oliveira, Tulio
,
Martin, Darren P
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 849 KB
Your tags:
english, 2018
3
Estimating evolutionary rates in giant viruses using ancient genomes
Duchêne, Sebastián
,
Holmes, Edward C
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 410 KB
Your tags:
english, 2018
4
Low-fidelity Venezuelan equine encephalitis virus polymerase mutants to improve live-attenuated vaccine safety and efficacy
Kautz, Tiffany F
,
Guerbois, Mathilde
,
Khanipov, Kamil
,
Patterson, Edward I
,
Langsjoen, Rose M
,
Yun, Ruimei
,
Warmbrod, Kelsey L
,
Fofanov, Yuriy
,
Weaver, Scott C
,
Forrester, Naomi L
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 1.36 MB
Your tags:
english, 2018
5
TreeTime: Maximum-likelihood phylodynamic analysis
Sagulenko, Pavel
,
Puller, Vadim
,
Neher, Richard A
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 757 KB
Your tags:
english, 2018
6
Inter- and intracontinental migrations and local differentiation have shaped the contemporary epidemiological landscape of canine parvovirus in South America
Grecco, Sofía
,
Iraola, Gregorio
,
Decaro, Nicola
,
Alfieri, Alice
,
Alfieri, Amauri
,
Gallo Calderón, Marina
,
da Silva, Ana Paula
,
Name, Daniela
,
Aldaz, Jaime
,
Calleros, Lucía
,
Marandino, Ana
,
Tomás, Gonz
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 470 KB
Your tags:
english, 2018
7
Private collection: high correlation of sample collection and patient admission date in clinical microbiological testing complicates sharing of phylodynamic metadata
Shean, Ryan C
,
Greninger, Alexander L
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 297 KB
Your tags:
english, 2018
8
The virome of Drosophila suzukii, an invasive pest of soft fruit
Medd, Nathan C
,
Fellous, Simon
,
Waldron, Fergal M
,
Xuéreb, Anne
,
Nakai, Madoka
,
Cross, Jerry V
,
Obbard, Darren J
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 1.83 MB
Your tags:
english, 2018
9
Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10
Suchard, Marc A
,
Lemey, Philippe
,
Baele, Guy
,
Ayres, Daniel L
,
Drummond, Alexei J
,
Rambaut, Andrew
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 5.29 MB
Your tags:
english, 2018
10
Evaluation of global HIV/SIV envelope gp120 RNA structure and evolution within and among infected hosts
Rife Magalis, Brittany
,
Kosakovsky Pond, Sergei L
,
Summers, Michael F
,
Salemi, Marco
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 1.55 MB
Your tags:
english, 2018
11
Ancient DNA provides evidence of 27,000-year-old papillomavirus infection and long-term codivergence with rodents
Larsen, Brendan B
,
Cole, Kenneth L
,
Worobey, Michael
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 448 KB
Your tags:
english, 2018
12
Patterns of genomic site inheritance in HIV-1M inter-subtype recombinants delineate the most likely genomic sites of subtype-specific adaptation
Tongo, Marcel
,
de Oliveira, Tulio
,
Martin, Darren P
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 573 KB
Your tags:
english, 2018
13
Mosquito bottlenecks alter viral mutant swarm in a tissue and time-dependent manner with contraction and expansion of variant positions and diversity
Patterson, Edward I
,
Khanipov, Kamil
,
Rojas, Mark M
,
Kautz, Tiffany F
,
Rockx-Brouwer, Dedeke
,
Golovko, Georgiy
,
Albayrak, Levent
,
Fofanov, Yuriy
,
Forrester, Naomi L
Journal:
Virus Evolution
Year:
2018
File:
PDF, 658 KB
Your tags:
2018
14
Discovery of Culex pipiens associated tunisia virus: a new ssRNA(+) virus representing a new insect associated virus family
Bigot, Diane
,
Atyame, Célestine M
,
Weill, Mylène
,
Justy, Fabienne
,
Herniou, Elisabeth A
,
Gayral, Philippe
Journal:
Virus Evolution
Year:
2018
File:
PDF, 1017 KB
Your tags:
2018
15
Cameroonian fruit bats harbor divergent viruses, including rotavirus H, bastroviruses, and picobirnaviruses using an alternative genetic code
Yinda, Claude Kwe
,
Ghogomu, Stephen Mbigha
,
Conceição-Neto, Nádia
,
Beller, Leen
,
Deboutte, Ward
,
Vanhulle, Emiel
,
Maes, Piet
,
Van Ranst, Marc
,
Matthijnssens, Jelle
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 3.15 MB
Your tags:
english, 2018
16
Chikungunya virus evolution following a large 3′UTR deletion results in host-specific molecular changes in protein-coding regions
Morley, Valerie J
,
Noval, María Gabriela
,
Chen, Rubing
,
Weaver, Scott C
,
Vignuzzi, Marco
,
Stapleford, Kenneth A
,
Turner, Paul E
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 500 KB
Your tags:
english, 2018
17
Mosquito bottlenecks alter viral mutant swarm in a tissue and time-dependent manner with contraction and expansion of variant positions and diversity
Patterson, Edward I
,
Khanipov, Kamil
,
Rojas, Mark M
,
Kautz, Tiffany F
,
Rockx-Brouwer, Dedeke
,
Golovko, Georgiy
,
Albayrak, Levent
,
Fofanov, Yuriy
,
Forrester, Naomi L
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 658 KB
Your tags:
english, 2018
18
Discovery of Culex pipiens associated tunisia virus: a new ssRNA(+) virus representing a new insect associated virus family
Bigot, Diane
,
Atyame, Célestine M
,
Weill, Mylène
,
Justy, Fabienne
,
Herniou, Elisabeth A
,
Gayral, Philippe
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 1017 KB
Your tags:
english, 2018
19
The global origins of resistance-associated variants in the non-structural proteins 5A and 5B of the hepatitis C virus
Jones, Bradley R
,
Howe, Anita Y M
,
Harrigan, P Richard
,
Joy, Jeffrey B
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 709 KB
Your tags:
english, 2018
20
Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver
Wymant, Chris
,
Blanquart, François
,
Golubchik, Tanya
,
Gall, Astrid
,
Bakker, Margreet
,
Bezemer, Daniela
,
Croucher, Nicholas J
,
Hall, Matthew
,
Hillebregt, Mariska
,
Ong, Swee Hoe
,
Ratmann, Oliver
,
Albert
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 3.14 MB
Your tags:
english, 2018
21
Selective constraint and adaptive potential of West Nile virus within and among naturally infected avian hosts and mosquito vectors
Nelson, Chase W
,
Sibley, Samuel D
,
Kolokotronis, Sergios-Orestis
,
Hamer, Gabriel L
,
Newman, Christina M
,
Anderson, Tavis K
,
Walker, Edward D
,
Kitron, Uriel D
,
Brawn, Jeffrey D
,
Ruiz, Marilyn O
,
Goldbe
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 2.25 MB
Your tags:
english, 2018
22
Viral attenuation by engineered protein fragmentation
Garry, Daniel J
,
Ellington, Andrew D
,
Molineux, Ian J
,
Bull, James J
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 389 KB
Your tags:
english, 2018
23
The number of genes encoding repeat domain-containing proteins positively correlates with genome size in amoebal giant viruses
Shukla, Avi
,
Chatterjee, Anirvan
,
Kondabagil, Kiran
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 1.17 MB
Your tags:
english, 2018
24
Differences in adaptive dynamics determine the success of virus variants that propagate together
Arribas, María
,
Aguirre, Jacobo
,
Manrubia, Susanna
,
Lázaro, Ester
Journal:
Virus Evolution
Year:
2018
Language:
english
File:
PDF, 680 KB
Your tags:
english, 2018
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