Volume 3; Issue 2

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Volume 3; Issue 2

mSphere

Volume 3; Issue 2

1

Systematic Bias Introduced by Genomic DNA Template Dilution in 16S rRNA Gene-Targeted Microbiota Profiling in Human Stool Homogenates

Multinu, Francesco, Harrington, Sean C., Chen, Jun, Jeraldo, Patricio R., Johnson, Stephen, Chia, Nicholas, Walther-Antonio, Marina R., Frank, Carolin

Journal:

Year:

2018

Language:

english

File:

PDF, 1.82 MB

english, 2018

2

A Reference Viral Database (RVDB) To Enhance Bioinformatics Analysis of High-Throughput Sequencing for Novel Virus Detection

Goodacre, Norman, Aljanahi, Aisha, Nandakumar, Subhiksha, Mikailov, Mike, Khan, Arifa S., Imperiale, Michael J., Delwart, Eric, Wang, David

Journal:

Year:

2018

Language:

english

File:

PDF, 1.42 MB

english, 2018

3

Novel Antifungal Compounds Discovered in Medicines for Malaria Venture’s Malaria Box

Jung, Eric H., Meyers, David J., Bosch, Jürgen, Casadevall, Arturo, Mitchell, Aaron P.

Journal:

Year:

2018

Language:

english

File:

PDF, 4.15 MB

english, 2018

4

An LaeA- and BrlA-Dependent Cellular Network Governs Tissue-Specific Secondary Metabolism in the Human Pathogen Aspergillus fumigatus

Lind, Abigail L., Lim, Fang Yun, Soukup, Alexandra A., Keller, Nancy P., Rokas, Antonis, Mitchell, Aaron P.

Journal:

Year:

2018

Language:

english

File:

PDF, 585 KB

english, 2018

5

A Critical Analysis of the Scientific and Commercial Rationales for the De Novo Synthesis of Horsepox Virus

Koblentz, Gregory D.

Journal:

Year:

2018

Language:

english

File:

PDF, 243 KB

english, 2018

6

Elevated Fecal pH Indicates a Profound Change in the Breastfed Infant Gut Microbiome Due to Reduction of Bifidobacterium over the Past Century

Henrick, Bethany M., Hutton, Andra A., Palumbo, Michelle C., Casaburi, Giorgio, Mitchell, Ryan D., Underwood, Mark A., Smilowitz, Jennifer T., Frese, Steven A., Oh, Julia

Journal:

Year:

2018

Language:

english

File:

PDF, 558 KB

english, 2018

7

Re-creation of Horsepox Virus

Imperiale, Michael J.

Journal:

Year:

2018

Language:

english

File:

PDF, 139 KB

english, 2018

8

Identification of Novel Viruses in Amblyomma americanum , Dermacentor variabilis , and Ixodes scapularis Ticks

Tokarz, Rafal, Sameroff, Stephen, Tagliafierro, Teresa, Jain, Komal, Williams, Simon H., Cucura, D. Moses, Rochlin, Ilia, Monzon, Javier, Carpi, Giovanna, Tufts, Danielle, Diuk-Wasser, Maria, Brinkerh

Journal:

Year:

2018

Language:

english

File:

PDF, 1.02 MB

english, 2018

9

Heterogeneous Antimicrobial Susceptibility Characteristics in Pseudomonas aeruginosa Isolates from Cystic Fibrosis Patients

Qin, Xuan, Zhou, Chuan, Zerr, Danielle M., Adler, Amanda, Addetia, Amin, Yuan, Shuhua, Greninger, Alexander L., Limbago, Brandi M.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.12 MB

english, 2018

10

Human Antibody Responses to Emerging Mayaro Virus and Cocirculating Alphavirus Infections Examined by Using Structural Proteins from Nine New and Old World Lineages

Smith, Jessica L., Pugh, Christine L., Cisney, Emily D., Keasey, Sarah L., Guevara, Carolina, Ampuero, Julia S., Comach, Guillermo, Gomez, Doris, Ochoa-Diaz, Margarita, Hontz, Robert D., Ulrich, Rober

Journal:

Year:

2018

Language:

english

File:

PDF, 1.50 MB

english, 2018

11

Shifts in the Gut Metabolome and Clostridium difficile Transcriptome throughout Colonization and Infection in a Mouse Model

Fletcher, Joshua R., Erwin, Samantha, Lanzas, Cristina, Theriot, Casey M., D'Orazio, Sarah E. F.

Journal:

Year:

2018

Language:

english

File:

PDF, 4.42 MB

english, 2018

12

Investigating Colonization of the Healthy Adult Gastrointestinal Tract by Fungi

Auchtung, Thomas A., Fofanova, Tatiana Y., Stewart, Christopher J., Nash, Andrea K., Wong, Matthew C., Gesell, Jonathan R., Auchtung, Jennifer M., Ajami, Nadim J., Petrosino, Joseph F., Mitchell, Aaro

Journal:

Year:

2018

Language:

english

File:

PDF, 1.30 MB

english, 2018

13

Intracellular Trafficking and Persistence of Acinetobacter baumannii Requires Transcription Factor EB

Parra-Millán, Raquel, Guerrero-Gómez, David, Ayerbe-Algaba, Rafael, Pachón-Ibáñez, Maria Eugenia, Miranda-Vizuete, Antonio, Pachón, Jerónimo, Smani, Younes, D'Orazio, Sarah E. F.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.66 MB

english, 2018

14

Zika Virus Infection Preferentially Counterbalances Human Peripheral Monocyte and/or NK Cell Activity

Lum, Fok-Moon, Lee, David, Chua, Tze-Kwang, Tan, Jeslin J. L., Lee, Cheryl Y. P., Liu, Xuan, Fang, Yongxiang, Lee, Bernett, Yee, Wearn-Xin, Rickett, Natasha Y., Chia, Po-Ying, Lim, Vanessa, Leo, Yee-S

Journal:

Year:

2018

Language:

english

File:

PDF, 3.93 MB

english, 2018

15

Aggregative Adherence and Intestinal Colonization by Enteroaggregative Escherichia coli Are Produced by Interactions among Multiple Surface Factors

Blanton, Laura V., Wang, Lawrence T., Hofmann, Jennifer, DuBow, Joshua, Lafrance, Alexander, Kwak, Stephen, Bowers, Levi, Levine, Mandara A., Hale, Charles O., Meneely, Philip M., Okeke, Iruka N., Dun

Journal:

Year:

2018

Language:

english

File:

PDF, 1.29 MB

english, 2018

16

Pseudotyping of HIV-1 with Human T-Lymphotropic Virus 1 (HTLV-1) Envelope Glycoprotein during HIV-1–HTLV-1 Coinfection Facilitates Direct HIV-1 Infection of Female Genital Epithelial Cells: Implications for Sexual Transmission of HIV-1

Tang, Yuyang, George, Alvin M., Petrechko, Oksana, Nouvet, Franklin J., Sweet, Stephanie D., Tanaka, Yuetsu, Imbiakha, Brian S., Jiang, Guochun, Gao, Wei, Anastos, Kathryn, Hildreth, James E. K., Fern

Journal:

Year:

2018

Language:

english

File:

PDF, 3.40 MB

english, 2018

17

High Salt Cross-Protects Escherichia coli from Antibiotic Treatment through Increasing Efflux Pump Expression

Zhu, Manlu, Dai, Xiongfeng, Castanheira, Mariana

Journal:

Year:

2018

Language:

english

File:

PDF, 1.12 MB

english, 2018

18

Iron Acquisition and Siderophore Release by Carbapenem-Resistant Sequence Type 258 Klebsiella pneumoniae

Holden, Victoria I., Wright, Meredith S., Houle, Sébastien, Collingwood, Abigail, Dozois, Charles M., Adams, Mark D., Bachman, Michael A., Castanheira, Mariana

Journal:

Year:

2018

Language:

english

File:

PDF, 1.63 MB

english, 2018

19

Evolutionary Plasticity of AmrZ Regulation in Pseudomonas

Baltrus, David A., Dougherty, Kevin, Diaz, Beatriz, Murillo, Rachel, Ellermeier, Craig D.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.06 MB

english, 2018

20

Influential Parameters for the Analysis of Intracellular Parasite Metabolomics

Carey, Maureen A., Covelli, Vincent, Brown, Audrey, Medlock, Gregory L., Haaren, Mareike, Cooper, Jessica G., Papin, Jason A., Guler, Jennifer L., Blader, Ira J.

Journal:

Year:

2018

Language:

english

File:

PDF, 630 KB

english, 2018

21

Impact of Long-Term Erythromycin Therapy on the Oropharyngeal Microbiome and Resistance Gene Reservoir in Non-Cystic Fibrosis Bronchiectasis

Choo, Jocelyn M., Abell, Guy C. J., Thomson, Rachel, Morgan, Lucy, Waterer, Grant, Gordon, David L., Taylor, Steven L., Leong, Lex E. X., Wesselingh, Steve L., Burr, Lucy D., Rogers, Geraint B., Casta

Journal:

Year:

2018

Language:

english

File:

PDF, 1.66 MB

english, 2018

22

Malaria in Farmed Ungulates: an Exciting New System for Comparative Parasitology

Perkins, Susan L.

Journal:

Year:

2018

Language:

english

File:

PDF, 153 KB

english, 2018

23

Molecular Preadaptation to Antimony Resistance in Leishmania donovani on the Indian Subcontinent

Dumetz, F., Cuypers, B., Imamura, H., Zander, D., D’Haenens, E., Maes, I., Domagalska, M. A., Clos, J., Dujardin, J.-C., De Muylder, G., Phillips, Margaret

Journal:

Year:

2018

Language:

english

File:

PDF, 2.45 MB

english, 2018

24

The Heteroaryldihydropyrimidine Bay 38-7690 Induces Hepatitis B Virus Core Protein Aggregates Associated with Promyelocytic Leukemia Nuclear Bodies in Infected Cells

Huber, Andrew D., Wolf, Jennifer J., Liu, Dandan, Gres, Anna T., Tang, Jing, Boschert, Kelsey N., Puray-Chavez, Maritza N., Pineda, Dallas L., Laughlin, Thomas G., Coonrod, Emily M., Yang, Qiongying,

Journal:

Year:

2018

Language:

english

File:

PDF, 2.75 MB

english, 2018

25

Transmembrane Domains of Highly Pathogenic Viral Fusion Proteins Exhibit Trimeric Association In Vitro

Webb, Stacy R., Smith, Stacy E., Fried, Michael G., Dutch, Rebecca Ellis, Duprex, W. Paul

Journal:

Year:

2018

Language:

english

File:

PDF, 2.08 MB

english, 2018

26

A Predicted Mannoprotein Participates in Cryptococcus gattii Capsular Structure

Reuwsaat, Julia Catarina Vieira, Motta, Heryk, Garcia, Ane Wichine Acosta, Vasconcelos, Carolina Bettker, Marques, Bárbara Machado, Oliveira, Natália Kronbauer, Rodrigues, Jéssica, Ferrareze, Patrícia

Journal:

Year:

2018

Language:

english

File:

PDF, 2.75 MB

english, 2018

27

New CRISPR Mutagenesis Strategies Reveal Variation in Repair Mechanisms among Fungi

Vyas, Valmik K., Bushkin, G. Guy, Bernstein, Douglas A., Getz, Matthew A., Sewastianik, Magdalena, Barrasa, M. Inmaculada, Bartel, David P., Fink, Gerald R., Mitchell, Aaron P.

Journal:

Year:

2018

Language:

english

File:

PDF, 3.38 MB

english, 2018

28

Ectopic Expression of the ydaS and ydaT Genes of the Cryptic Prophage Rac of Escherichia coli K-12 May Be Toxic but Do They Really Encode Toxins?: a Case for Using Genetic Context To Understand Function

Jobling, Michael G., Ellermeier, Craig D.

Journal:

Year:

2018

Language:

english

File:

PDF, 150 KB

english, 2018

29

Beaver Fever: Whole-Genome Characterization of Waterborne Outbreak and Sporadic Isolates To Study the Zoonotic Transmission of Giardiasis

Tsui, Clement K.-M., Miller, Ruth, Uyaguari-Diaz, Miguel, Tang, Patrick, Chauve, Cedric, Hsiao, William, Isaac-Renton, Judith, Prystajecky, Natalie, Singh, Upinder

Journal:

Year:

2018

Language:

english

File:

PDF, 2.40 MB

english, 2018

30

BGLF2 Increases Infectivity of Epstein-Barr Virus by Activating AP-1 upon De Novo Infection

Konishi, Natsuno, Narita, Yohei, Hijioka, Fumiya, Masud, H. M. Abdullah Al, Sato, Yoshitaka, Kimura, Hiroshi, Murata, Takayuki, Damania, Blossom

Journal:

Year:

2018

Language:

english

File:

PDF, 1.22 MB

english, 2018

31

Dal81 Regulates Expression of Arginine Metabolism Genes in Candida parapsilosis

Turner, Siobhan A., Ma, Qinxi, Ola, Mihaela, Martinez de San Vicente, Kontxi, Butler, Geraldine, Mitchell, Aaron P.

Journal:

Year:

2018

Language:

english

File:

PDF, 653 KB

english, 2018

32

A Holistic Assessment of the Risks and Benefits of the Synthesis of Horsepox Virus

DiEuliis, Diane, Gronvall, Gigi Kwik

Journal:

Year:

2018

Language:

english

File:

PDF, 324 KB

english, 2018

33

Talaromyces marneffei simA Encodes a Fungal Cytochrome P450 Essential for Survival in Macrophages

Boyce, Kylie J., De Souza, David P., Dayalan, Saravanan, Pasricha, Shivani, Tull, Dedreia, McConville, Malcolm J., Andrianopoulos, Alex, Mitchell, Aaron P.

Journal:

Year:

2018

Language:

english

File:

PDF, 4.25 MB

english, 2018

34

Human Immunoglobulin G Cannot Inhibit Fibrinogen Binding by the Genetically Diverse A Domain of Staphylococcus aureus Fibronectin-Binding Protein A

den Reijer, P. Martijn, Tavakol, Mehri, Lemmens-den Toom, Nicole, Allouch, Dikra, Thomas, Sheila, Ganesh, Vannakambadi K., Ko, Ya-Ping, Verbrugh, Henri A., van Wamel, Willem J. B., Fey, Paul D.

Journal:

Year:

2018

Language:

english

File:

PDF, 833 KB

english, 2018

35

Rapid Gene Concatenation for Genetic Rescue of Multigene Mutants in Candida albicans

Huang, Manning Y., Woolford, Carol A., Mitchell, Aaron P., Alspaugh, J. Andrew

Journal:

Year:

2018

Language:

english

File:

PDF, 1.37 MB

english, 2018

36

Mutations Conferring Increased Sensitivity to Tripartite Motif 22 Restriction Accumulated Progressively in the Nucleoprotein of Seasonal Influenza A (H1N1) Viruses between 1918 and 2009

Pagani, Isabel, Di Pietro, Andrea, Oteiza, Alexandra, Ghitti, Michela, Mechti, Nadir, Naffakh, Nadia, Vicenzi, Elisa, Schwemmle, Martin

Journal:

Year:

2018

Language:

english

File:

PDF, 2.73 MB

english, 2018

37

Single-Cell Analysis Reveals Distinct Gene Expression and Heterogeneity in Male and Female Plasmodium falciparum Gametocytes

Walzer, Katelyn A., Kubicki, Danielle M., Tang, Xiaohu, Chi, Jen-Tsan Ashley, Dzikowski, Ron

Journal:

Year:

2018

Language:

english

File:

PDF, 4.47 MB

english, 2018

38

Natural History of Plasmodium odocoilei Malaria Infection in Farmed White-Tailed Deer

Guggisberg, Ann M., Sayler, Katherine A., Wisely, Samantha M., Odom John, Audrey R., Blader, Ira J.

Journal:

Year:

2018

Language:

english

File:

PDF, 377 KB

english, 2018

39

Ehrlichia chaffeensis TRP75 Interacts with Host Cell Targets Involved in Homeostasis, Cytoskeleton Organization, and Apoptosis Regulation To Promote Infection

Luo, Tian, Mitra, Shubhajit, McBride, Jere W., D'Orazio, Sarah E. F.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.42 MB

english, 2018

40

Construction and Use of a Recyclable Marker To Examine the Role of Major Facilitator Superfamily Protein Members in Candida glabrata Drug Resistance Phenotypes

Vu, Bao G., Moye-Rowley, W. Scott, Mitchell, Aaron P.

Journal:

Year:

2018

Language:

english

File:

PDF, 894 KB

english, 2018

41

Assembly, Biochemical Characterization, Immunogenicity, Adjuvanticity, and Efficacy of Shigella Artificial Invaplex

Turbyfill, K. Ross, Clarkson, Kristen A., Vortherms, Anthony R., Oaks, Edwin V., Kaminski, Robert W., Pasetti, Marcela F.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.86 MB

english, 2018

42

Reproductive System Symbiotic Bacteria Are Conserved between Two Distinct Populations of Euprymna scolopes from Oahu, Hawaii

Kerwin, Allison H., Nyholm, Spencer V., McMahon, Katherine

Journal:

Year:

2018

Language:

english

File:

PDF, 1.80 MB

english, 2018

43

Tracking Polymicrobial Metabolism in Cystic Fibrosis Airways: Pseudomonas aeruginosa Metabolism and Physiology Are Influenced by Rothia mucilaginosa -Derived Metabolites

Gao, Bei, Gallagher, Tara, Zhang, Ying, Elbadawi-Sidhu, Mona, Lai, Zijuan, Fiehn, Oliver, Whiteson, Katrine L., McMahon, Katherine

Journal:

Year:

2018

Language:

english

File:

PDF, 840 KB

english, 2018

44

Interlaboratory Comparison of the Pneumococcal Multiplex Opsonophagocytic Assays and Their Level of Agreement for Determination of Antibody Function in Pediatric Sera

Balloch, A., Roalfe, L., Ekstrom, N., Nguyen, C. D., Spry, L., Marimla, R. A., Licciardi, P. V., Goldblatt, D., Mulholland, E. K., Burns, Drusilla L.

Journal:

Year:

2018

Language:

english

File:

PDF, 654 KB

english, 2018

45

Reply to Jobling, “Ectopic Expression of the ydaS and ydaT Genes of the Cryptic Prophage Rac of Escherichia coli K-12 May Be Toxic but Do They Really Encode Toxins?: a Case for Using Genetic Context To Understand Function”

Seshasayee, Aswin Sai Narain, Ellermeier, Craig D.

Journal:

Year:

2018

Language:

english

File:

PDF, 141 KB

english, 2018

46

Erratum for DiEuliis and Gronvall, “A Holistic Assessment of the Risks and Benefits of the Synthesis of Horsepox Virus”

DiEuliis, Diane, Gronvall, Gigi Kwik

Journal:

Year:

2018

Language:

english

File:

PDF, 130 KB

english, 2018

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