Volume 192

Computer Physics Communications

Volume 192

1

OpenSMOKE++: An object-oriented framework for the numerical modeling of reactive systems with detailed kinetic mechanisms

Cuoci, A., Frassoldati, A., Faravelli, T., Ranzi, E.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 3.63 MB

english, 2015

2

Hybrid functionals for large periodic systems in an all-electron, numeric atom-centered basis framework

Levchenko, Sergey V., Ren, Xinguo, Wieferink, Jürgen, Johanni, Rainer, Rinke, Patrick, Blum, Volker, Scheffler, Matthias

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 346 KB

english, 2015

3

Opinion percolation in structured population

Yang, Han-Xin, Huang, Liang

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 348 KB

english, 2015

4

DAMQT 2.0: A new version of the DAMQT package for the analysis of electron density in molecules

López, Rafael, Rico, Jaime Fernández, Ramírez, Guillermo, Ema, Ignacio, Zorrilla, David

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 371 KB

english, 2015

5

PDB4DNA: Implementation of DNA geometry from the Protein Data Bank (PDB) description for Geant4-DNA Monte-Carlo simulations

Delage, E., Pham, Q.T., Karamitros, M., Payno, H., Stepan, V., Incerti, S., Maigne, L., Perrot, Y.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.25 MB

english, 2015

6

A numerical meshless method of soliton-like structures model via an optimal sampling density based kernel interpolation

Xu, Xin, Lu, Zhenzhou, Luo, Xiaopeng

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 639 KB

english, 2015

7

A graphical approach to radio frequency quadrupole design

Turemen, G., Unel, G., Yasatekin, B.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 980 KB

english, 2015

8

Accelerated matrix element method with parallel computing

Schouten, D., DeAbreu, A., Stelzer, B.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 436 KB

english, 2015

9

A class of locally well-posed hybridizable discontinuous Galerkin methods for the solution of time-harmonic Maxwell’s equations

Li, Liang, Lanteri, Stéphane, Perrussel, Ronan

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 683 KB

english, 2015

10

AQUAgpusph, a new free 3D SPH solver accelerated with OpenCL

Cercos-Pita, J.L.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 3.06 MB

english, 2015

11

Elimination of the numerical Cerenkov instability for spectral EM-PIC codes

Yu, Peicheng, Xu, Xinlu, Decyk, Viktor K., Fiuza, Frederico, Vieira, Jorge, Tsung, Frank S., Fonseca, Ricardo A., Lu, Wei, Silva, Luis O., Mori, Warren B.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 3.30 MB

english, 2015

12

SLIMP: Strong laser interaction model package for atoms and molecules

Zhang, Bin, Zhao, Zengxiu

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 650 KB

english, 2015

13

Strong scaling of general-purpose molecular dynamics simulations on GPUs

Glaser, Jens, Nguyen, Trung Dac, Anderson, Joshua A., Lui, Pak, Spiga, Filippo, Millan, Jaime A., Morse, David C., Glotzer, Sharon C.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.17 MB

english, 2015

14

GPU-based acceleration of free energy calculations in solid state physics

Januszewski, Michał, Ptok, Andrzej, Crivelli, Dawid, Gardas, Bartłomiej

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 932 KB

english, 2015

15

Solving Parker’s transport equation with stochastic differential equations on GPUs

Dunzlaff, P., Strauss, R.D., Potgieter, M.S.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1014 KB

english, 2015

16

Distributed Database Kriging for Adaptive Sampling (

Roehm, Dominic, Pavel, Robert S., Barros, Kipton, Rouet-Leduc, Bertrand, McPherson, Allen L., Germann, Timothy C., Junghans, Christoph

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.71 MB

english, 2015

17

Shape memory alloy nanostructures with coupled dynamic thermo-mechanical effects

Dhote, R.P., Gomez, H., Melnik, R.N.V., Zu, J.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.48 MB

english, 2015

18

AWESoMe: A code for the calculation of phase and group velocities of acoustic waves in homogeneous solids

Muñoz-Santiburcio, Daniel, Hernández-Laguna, Alfonso, Soto, Juan I.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 2.37 MB

english, 2015

19

OpenCL parallel integration of ordinary differential equations: Applications in computational dynamics

Rodríguez, Marcos, Blesa, Fernando, Barrio, Roberto

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 2.40 MB

english, 2015

20

LieART—A Mathematica application for Lie algebras and representation theory

Feger, Robert, Kephart, Thomas W.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 784 KB

english, 2015

21

GPScan.VI: A general-purpose LabVIEW program for scanning imaging or any application requiring synchronous analog voltage generation and data acquisition

Ferrand, Patrick

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.84 MB

english, 2015

22

A parallel implementation of an off-lattice individual-based model of multicellular populations

Harvey, Daniel G., Fletcher, Alexander G., Osborne, James M., Pitt-Francis, Joe

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.09 MB

english, 2015

23

SIMLA: Simulating particle dynamics in intense laser and other electromagnetic fields via classical and quantum electrodynamics

Green, D.G., Harvey, C.N.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 928 KB

english, 2015

24

An improved TIGER2 implementation for NAMD suitable for the Blue Gene architecture

Brown, Aaron H., Walsh, Tiffany R.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 477 KB

english, 2015

25

micrOMEGAs4.1: Two dark matter candidates

Bélanger, G., Boudjema, F., Pukhov, A., Semenov, A.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 447 KB

english, 2015

26

Accurate modelling of flow induced stresses in rigid colloidal aggregates

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.80 MB

english, 2015

27

Improved analytical representation of combinations of Fermi–Dirac integrals for finite-temperature density functional calculations

Karasiev, Valentin V., Chakraborty, Debajit, Trickey, S.B.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 676 KB

english, 2015

28

μ-diff: An open-source Matlab toolbox for compu

Thierry, Bertrand, Antoine, Xavier, Chniti, Chokri, Alzubaidi, Hasan

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.59 MB

english, 2015

29

An extended-Lagrangian scheme for charge equilibration in reactive molecular dynamics simulations

Nomura, Ken-ichi, Small, Patrick E., Kalia, Rajiv K., Nakano, Aiichiro, Vashishta, Priya

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.73 MB

english, 2015

30

Application of locally one-dimensional semi-implicit scheme in phase-field equations

Cai, Dan, Zhang, Lijun, Du, Yong

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.16 MB

english, 2015

31

Phonon Transport Simulator (PhonTS)

Chernatynskiy, Aleksandr, Phillpot, Simon R.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 766 KB

english, 2015

32

Editorial Board

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 73 KB

english, 2015

33

Nektar++: An open-source spectral/hp

Cantwell, C.D., Moxey, D., Comerford, A., Bolis, A., Rocco, G., Mengaldo, G., De Grazia, D., Yakovlev, S., Lombard, J.-E., Ekelschot, D., Jordi, B., Xu, H., Mohamied, Y., Eskilsson, C., Nelson, B., Vo

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.68 MB

english, 2015

34

Implicit solution of the material transport in Stokes flow simulation: Toward thermal convection simulation surrounded by free surface

Furuichi, Mikito, May, Dave A.

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 1.54 MB

english, 2015

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