Volume 4; Issue 1

Biology Methods and Protocols

Volume 4; Issue 1

1

Genetic transformation of Coniochaeta sp. 2T2.1, key fungal member of a lignocellulose-degrading microbial consortium

Nichols, Nancy N, Hector, Ronald E, Frazer, Sarah E

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 370 KB

english, 2019

2

Enzyme-linked oligonucleotide hybridization assay for direct oligo measurement in blood

Lorenson, Mary Y, Chen, Kuan-Hui Ethan, Walker, Ameae M

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 911 KB

english, 2019

3

Discrimination between Asian populations of the parasitoid wasp Ganaspis cf. brasiliensis using a simple MALDI-TOF MS-based method for use with insects

Reeve, Michael A, Seehausen, M Lukas

Journal:

Biology Methods and Protocols

Year:

2019

File:

PDF, 499 KB

2019

4

Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations

David, Pedro H C, Sá-Pinto, Xana, Nogueira, Teresa

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 621 KB

english, 2019

5

Live imaging of intracellular pH in planarians using the ratiometric fluorescent dye SNARF-5F-AM

Beane, Wendy Scott, Adams, Dany Spencer, Morokuma, Junji, Levin, Michael

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 596 KB

english, 2019

6

A method for filamentous fungal growth and sample preparation aimed at more consistent MALDI-TOF MS spectra despite variations in growth rates and/or incubation times

Reeve, Michael A, Bachmann, Denise

Journal:

Biology Methods and Protocols

Year:

2019

File:

PDF, 1.10 MB

2019

7

Live imaging of intracellular pH in planarians using the ratiometric fluorescent dye SNARF-5F-AM

Beane, Wendy Scott, Adams, Dany Spencer, Morokuma, Junji, Levin, Michael

Journal:

Biology Methods and Protocols

Year:

2019

File:

PDF, 596 KB

2019

8

Purification of specific DNA species using the CRISPR system

Fujita, Toshitsugu, Fujii, Hodaka

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 293 KB

english, 2019

9

Immunofluorescence and image analysis pipeline for Drosophila motor neurons

Brown, Jeremy R, Phongthachit, Chanpasith, Sulkowski, Mikolaj J

Journal:

Biology Methods and Protocols

Year:

2019

File:

PDF, 746 KB

2019

10

Target enrichment from a DNA mixture by oligoribonucleotide interference-PCR (ORNi-PCR)

Fujita, Toshitsugu, Motooka, Daisuke, Fujii, Hodaka

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 368 KB

english, 2019

11

A bioinformatic pipeline to analyze ChIP-exo datasets

Börlin, Christoph S, Bergenholm, David, Holland, Petter, Nielsen, Jens

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 719 KB

english, 2019

12

MALDI-TOF MS protein fingerprinting of mixed samples

Reeve, Michael A, Bachmann, Denise

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 723 KB

english, 2019

13

MALDI-TOF MS protein fingerprinting of mixed samples

Reeve, Michael A, Bachmann, Denise

Journal:

Biology Methods and Protocols

Year:

2019

File:

PDF, 723 KB

2019

14

PrimerPooler: automated primer pooling to prepare library for targeted sequencing

Brown, Silas S, Chen, Yun-Wen, Wang, Ming, Clipson, Alexandra, Ochoa, Eguzkine, Du, Ming-Qing

Journal:

Biology Methods and Protocols

Year:

2019

File:

PDF, 58 KB

2019

15

PrimerPooler: automated primer pooling to prepare library for targeted sequencing

Brown, Silas S, Chen, Yun-Wen, Wang, Ming, Clipson, Alexandra, Ochoa, Eguzkine, Du, Ming-Qing

Journal:

Biology Methods and Protocols

Year:

2019

File:

PDF, 58 KB

2019

16

Digging deeper into volatile organic compounds associated with cancer

Janfaza, Sajjad, Khorsand, Babak, Nikkhah, Maryam, Zahiri, Javad

Journal:

Biology Methods and Protocols

Year:

2019

File:

PDF, 540 KB

2019

17

A comprehensive comparison and overview of R packages for calculating sample entropy

Chen, Chang, Sun, Shixue, Cao, Zhixin, Shi, Yan, Sun, Baoqing, Zhang, Xiaohua Douglas

Journal:

Biology Methods and Protocols

Year:

2019

File:

PDF, 365 KB

2019

18

Identification of Penicillium species by MALDI-TOF MS analysis of spores collected by dielectrophoresis

Reeve, Michael A, Bachmann, Denise, Caine, Thelma S

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 1.66 MB

english, 2019

19

Beyond classic editing: innovative CRISPR approaches for functional studies of long non-coding RNA

Awwad, Dahlia A

Journal:

Biology Methods and Protocols

Year:

2019

Language:

english

File:

PDF, 424 KB

english, 2019