Volume 2009

Main
Database
Volume 2009

Database

Volume 2009

1

New mutant phenotype data curation system in the Saccharomyces Genome Database

Costanzo, M. C., Skrzypek, M. S., Nash, R., Wong, E., Binkley, G., Engel, S. R., Hitz, B., Hong, E. L., Cherry, J. M.

Journal:

Year:

2009

Language:

english

File:

PDF, 631 KB

english, 2009

2

Gramene QTL database: development, content and applications

Ni, J., Pujar, A., Youens-Clark, K., Yap, I., Jaiswal, P., Tecle, I., Tung, C.-W., Ren, L., Spooner, W., Wei, X., Avraham, S., Ware, D., Stein, L., McCouch, S.

Journal:

Year:

2009

Language:

english

File:

PDF, 318 KB

english, 2009

3

Radiation Genes: a database devoted to microarrays screenings revealing transcriptome alterations induced by ionizing radiation in mammalian cells

Chiani, F., Iannone, C., Negri, R., Paoletti, D., D'Antonio, M., De Meo, P. D., Castrignano, T.

Journal:

Year:

2009

Language:

english

File:

PDF, 659 KB

english, 2009

4

miRo: a miRNA knowledge base

Lagana, A., Forte, S., Giudice, A., Arena, M. R., Puglisi, P. L., Giugno, R., Pulvirenti, A., Shasha, D., Ferro, A.

Journal:

Year:

2009

Language:

english

File:

PDF, 404 KB

english, 2009

5

Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase

Gaudet, P., Lane, L., Fey, P., Bridge, A., Poux, S., Auchincloss, A., Axelsen, K., Braconi Quintaje, S., Boutet, E., Brown, P., Coudert, E., Datta, R.S., de Lima, W.C., de Oliveira Lima, T., Duvaud, S

Journal:

Year:

2009

Language:

english

File:

PDF, 703 KB

english, 2009

6

Understanding PubMed(R) user search behavior through log analysis

Islamaj Dogan, R., Murray, G. C., Neveol, A., Lu, Z.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.08 MB

english, 2009

7

A large and accurate collection of peptidase cleavages in the MEROPS database

Rawlings, N. D.

Journal:

Year:

2009

Language:

english

File:

PDF, 468 KB

english, 2009

8

QuickGO: a user tutorial for the web-based Gene Ontology browser

Huntley, R. P., Binns, D., Dimmer, E., Barrell, D., O'Donovan, C., Apweiler, R.

Journal:

Year:

2009

Language:

english

File:

PDF, 3.70 MB

english, 2009

9

The Homeodomain Resource: a comprehensive collection of sequence, structure, interaction, genomic and functional information on the homeodomain protein family

Moreland, R. T., Ryan, J. F., Pan, C., Baxevanis, A. D.

Journal:

Year:

2009

Language:

english

File:

PDF, 768 KB

english, 2009

10

A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki

Florez, L. A., Roppel, S. F., Schmeisky, A. G., Lammers, C. R., Stulke, J.

Journal:

Year:

2009

Language:

english

File:

PDF, 775 KB

english, 2009

11

Dr. Zompo: an online data repository for Zostera marina and Posidonia oceanica ESTs

Wissler, L., Dattolo, E., Moore, A. D., Reusch, T. B. H., Olsen, J. L., Migliaccio, M., Bornberg-Bauer, E., Procaccini, G.

Journal:

Year:

2009

Language:

english

File:

PDF, 614 KB

english, 2009

12

MaizeGDB becomes 'sequence-centric'

Sen, T. Z., Andorf, C. M., Schaeffer, M. L., Harper, L. C., Sparks, M. E., Duvick, J., Brendel, V. P., Cannon, E., Campbell, D. A., Lawrence, C. J.

Journal:

Year:

2010

Language:

english

File:

PDF, 776 KB

english, 2010

13

The Prion Disease Database: a comprehensive transcriptome resource for systems biology research in prion diseases

Gehlenborg, N., Hwang, D., Lee, I. Y., Yoo, H., Baxter, D., Petritis, B., Pitstick, R., Marzolf, B., DeArmond, S. J., Carlson, G. A., Hood, L.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.41 MB

english, 2009

14

Cildb: a knowledgebase for centrosomes and cilia

Arnaiz, O., Malinowska, A., Klotz, C., Sperling, L., Dadlez, M., Koll, F., Cohen, J.

Journal:

Year:

2009

Language:

english

File:

PDF, 813 KB

english, 2009

15

Integrating text mining into the MGI biocuration workflow

Dowell, K.G., McAndrews-Hill, M.S., Hill, D.P., Drabkin, H.J., Blake, J.A.

Journal:

Year:

2009

Language:

english

File:

PDF, 964 KB

english, 2009

16

ORION-VIRCAT: a tool for mapping ICTV and NCBI taxonomies

Valdivia-Granda, W., Larson, F.

Journal:

Year:

2009

Language:

english

File:

PDF, 202 KB

english, 2009

17

DATABASE: A new forum for biological databases and curation

Landsman, D., Gentleman, R., Kelso, J., Francis Ouellette, B. F.

Journal:

Year:

2010

Language:

english

File:

PDF, 42 KB

english, 2010

18

Differential direct coding: a compression algorithm for nucleotide sequence data

Journal:

Year:

2009

Language:

english

File:

PDF, 91 KB

english, 2009

19

DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels

Yu, H., Yu, F.-D., Zhang, G.-Q., Shen, X., Chen, Y.-Q., Li, Y.-Y., Li, Y.-X.

Journal:

Year:

2009

Language:

english

File:

PDF, 513 KB

english, 2009

20

MicroScope: a platform for microbial genome annotation and comparative genomics

Vallenet, D., Engelen, S., Mornico, D., Cruveiller, S., Fleury, L., Lajus, A., Rouy, Z., Roche, D., Salvignol, G., Scarpelli, C., Medigue, C.

Journal:

Year:

2009

Language:

english

File:

PDF, 1018 KB

english, 2009

21

DATABASE Editorial Board 2009

Journal:

Year:

2010

Language:

english

File:

PDF, 31 KB

english, 2010

22

Models for financial sustainability of biological databases and resources

Chandras, C., Weaver, T., Zouberakis, M., Smedley, D., Schughart, K., Rosenthal, N., Hancock, J. M., Kollias, G., Schofield, P. N., Aidinis, V.

Journal:

Year:

2009

Language:

english

File:

PDF, 241 KB

english, 2009

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